Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521860 | XP_013462024.1 | 95.369 | 583 | 26 | 1 | 1 | 583 | 5 | 586 | 0.0 | 1158 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521860 | sp|Q94IR2|CCD1_PHAVU | 31.703 | 552 | 322 | 20 | 45 | 575 | 15 | 532 | 5.93e-69 | 235 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521860 | A0A072V1Z3 | 95.369 | 583 | 26 | 1 | 1 | 583 | 5 | 586 | 0.0 | 1158 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0383590 | Msa0521860 | 0.845844 | 3.151313e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521860 | MtrunA17_Chr3g0140121 | 95.369 | 583 | 26 | 1 | 1 | 583 | 5 | 586 | 0.0 | 1158 |
| Msa0521860 | MtrunA17_Chr8g0352261 | 31.898 | 511 | 300 | 16 | 81 | 575 | 86 | 564 | 2.59e-70 | 237 |
| Msa0521860 | MtrunA17_Chr8g0352301 | 31.193 | 545 | 324 | 17 | 50 | 575 | 52 | 564 | 1.95e-69 | 234 |
| Msa0521860 | MtrunA17_Chr8g0352321 | 31.136 | 546 | 325 | 18 | 50 | 575 | 15 | 529 | 9.01e-67 | 226 |
| Msa0521860 | MtrunA17_Chr8g0352311 | 30.275 | 545 | 329 | 17 | 50 | 575 | 53 | 565 | 2.57e-65 | 223 |
| Msa0521860 | MtrunA17_Chr5g0407951 | 28.807 | 545 | 312 | 19 | 58 | 575 | 75 | 570 | 1.64e-56 | 200 |
| Msa0521860 | MtrunA17_Chr5g0407941 | 28.257 | 545 | 314 | 19 | 58 | 575 | 74 | 568 | 5.13e-55 | 196 |
| Msa0521860 | MtrunA17_Chr8g0376401 | 29.070 | 516 | 302 | 18 | 75 | 575 | 131 | 597 | 4.24e-53 | 191 |
| Msa0521860 | MtrunA17_Chr5g0407931 | 26.888 | 543 | 324 | 17 | 58 | 575 | 115 | 609 | 4.14e-52 | 188 |
| Msa0521860 | MtrunA17_Chr2g0312951 | 27.831 | 521 | 306 | 21 | 75 | 575 | 131 | 601 | 2.65e-47 | 175 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521860 | AT3G63520.1 | 31.942 | 551 | 311 | 23 | 50 | 575 | 16 | 527 | 1.39e-66 | 226 |
| Msa0521860 | AT4G19170.1 | 27.936 | 562 | 331 | 20 | 41 | 575 | 73 | 587 | 7.00e-57 | 201 |
| Msa0521860 | AT1G30100.1 | 30.078 | 512 | 293 | 21 | 82 | 575 | 116 | 580 | 6.41e-51 | 185 |
| Msa0521860 | AT3G14440.1 | 29.423 | 520 | 299 | 23 | 75 | 575 | 119 | 589 | 6.64e-51 | 185 |
| Msa0521860 | AT1G78390.1 | 30.116 | 518 | 295 | 23 | 75 | 575 | 179 | 646 | 1.87e-50 | 185 |
| Msa0521860 | AT4G18350.1 | 28.355 | 529 | 313 | 20 | 66 | 575 | 93 | 574 | 2.65e-46 | 172 |
| Msa0521860 | AT3G24220.1 | 27.556 | 577 | 333 | 24 | 36 | 575 | 39 | 567 | 4.15e-45 | 168 |
| Msa0521860 | AT4G32810.2 | 23.372 | 522 | 333 | 21 | 98 | 576 | 97 | 594 | 2.11e-13 | 73.6 |
Find 107 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCGTGGTTGGAATTATTTC+TGG | 0.150228 | 3_4:-74805706 | Msa0521860:intron |
| TCTGCAAGACATTTCAATTT+TGG | 0.150521 | 3_4:+74803802 | None:intergenic |
| TTAGCTAGACCTCTATATTT+TGG | 0.194225 | 3_4:+74804257 | None:intergenic |
| TTGGTAGATCAAGTCATATT+TGG | 0.213917 | 3_4:-74806414 | Msa0521860:CDS |
| TGGTGACAAACCAGTTTATA+TGG | 0.241863 | 3_4:-74804494 | Msa0521860:CDS |
| TTCAGCCGATGGAAAGAAAT+TGG | 0.243369 | 3_4:-74805601 | Msa0521860:intron |
| GCCATTTCATACAATAATAA+TGG | 0.270032 | 3_4:-74807586 | Msa0521860:CDS |
| CCTTGAAAACTTTAAACAAT+TGG | 0.286841 | 3_4:-74805938 | Msa0521860:CDS |
| AAATCAACAAATTCTATCTT+TGG | 0.288217 | 3_4:-74806433 | Msa0521860:CDS |
| GTAACTAGCTCCCCTGTAAT+TGG | 0.289575 | 3_4:+74805757 | None:intergenic |
| TGTCTGCTTATCTCTTCAAC+TGG | 0.296246 | 3_4:-74806222 | Msa0521860:CDS |
| CGGATCAGGTTCAGGAATTA+AGG | 0.302842 | 3_4:+74804603 | None:intergenic |
| CAAGCCATTGCTTCCATCTA+AGG | 0.303933 | 3_4:-74807279 | Msa0521860:intron |
| ATATGGTATTCCATCCTTAT+AGG | 0.314768 | 3_4:+74804073 | None:intergenic |
| CTTCATGCCAATCTCCTTCC+AGG | 0.318726 | 3_4:-74803756 | Msa0521860:CDS |
| ACCTTTGGATGGCTGGTAAA+AGG | 0.327354 | 3_4:+74805891 | None:intergenic |
| TCCATTATTATTGTATGAAA+TGG | 0.328717 | 3_4:+74807585 | None:intergenic |
| ACAATGTGAAATGTGCAATT+AGG | 0.334412 | 3_4:+74805007 | None:intergenic |
| ACCACGGCAAAAGGTTTAAC+TGG | 0.338349 | 3_4:+74805721 | None:intergenic |
| TCACAGAAAGCTCCAATTAC+AGG | 0.344001 | 3_4:-74805769 | Msa0521860:intron |
| ACCAATGTGTTTGAGCATTC+AGG | 0.348877 | 3_4:-74806014 | Msa0521860:CDS |
| TGGTAGATCAAGTCATATTT+GGG | 0.355936 | 3_4:-74806413 | Msa0521860:CDS |
| TTATACATATATACCTTAGA+TGG | 0.357288 | 3_4:+74807266 | None:intergenic |
| TTTGAACTCGGATCAGGTTC+AGG | 0.357490 | 3_4:+74804595 | None:intergenic |
| TAGAAGTCTGTTTAGATCAA+TGG | 0.358208 | 3_4:+74805227 | None:intergenic |
| CTTGAAAACTTTAAACAATT+GGG | 0.359909 | 3_4:-74805937 | Msa0521860:CDS |
| TTGTTTCTGCCTGCCATAGA+TGG | 0.360582 | 3_4:-74806262 | Msa0521860:CDS |
| AGAGTTCCATATGGGTTTCA+TGG | 0.379567 | 3_4:-74803782 | Msa0521860:CDS |
| TATGCAAACTGGAGAGGTTA+AGG | 0.384542 | 3_4:-74804530 | Msa0521860:CDS |
| GGCGAGTGAATTGCCATCTA+TGG | 0.391200 | 3_4:+74806249 | None:intergenic |
| ATAGGAAAATCCATATAAAC+TGG | 0.403573 | 3_4:+74804484 | None:intergenic |
| GGAAAGAATATGCAAGGATT+GGG | 0.405464 | 3_4:-74805081 | Msa0521860:CDS |
| ACAGGGGAGCTAGTTACATT+AGG | 0.407012 | 3_4:-74805751 | Msa0521860:CDS |
| ACACCCTCTGGAAAATCATT+AGG | 0.408667 | 3_4:+74807114 | None:intergenic |
| GTAGATTAATAAAGTATGAT+AGG | 0.417481 | 3_4:-74805102 | Msa0521860:intron |
| GAAGAGATAAGCAGACAAAA+TGG | 0.421406 | 3_4:+74806228 | None:intergenic |
| AGGAAAGAATATGCAAGGAT+TGG | 0.439667 | 3_4:-74805082 | Msa0521860:CDS |
| ATGTATTCTTCTCAAACATA+TGG | 0.440364 | 3_4:+74804056 | None:intergenic |
| ATGATCAATGAAAACTTTGT+TGG | 0.443863 | 3_4:-74804463 | Msa0521860:CDS |
| CAACGTGCTTGTTGTTATAG+AGG | 0.446103 | 3_4:+74806326 | None:intergenic |
| ATAATTCCAACCACGGCAAA+AGG | 0.447479 | 3_4:+74805712 | None:intergenic |
| TGCTCCTGTGGAAGAGTTGG+AGG | 0.452956 | 3_4:-74807172 | Msa0521860:CDS |
| TAATAATCCTGGAAGGAGAT+TGG | 0.458181 | 3_4:+74803749 | None:intergenic |
| ATGTCTTGCAGAGTTCCATA+TGG | 0.467817 | 3_4:-74803791 | Msa0521860:CDS |
| TGGACTTAACAGTTGAGATC+TGG | 0.470277 | 3_4:-74806062 | Msa0521860:intron |
| CTTTGCTCCTGTGGAAGAGT+TGG | 0.475874 | 3_4:-74807175 | Msa0521860:CDS |
| TTGCAGGTACAATGTGATCA+TGG | 0.476501 | 3_4:-74805262 | Msa0521860:intron |
| GGTTATCTCGTTGTCATGAA+TGG | 0.476534 | 3_4:-74804561 | Msa0521860:CDS |
| GCCTTTGTGCCTAGAGATGA+AGG | 0.482935 | 3_4:-74804019 | Msa0521860:CDS |
| ATGGATGCAAGTCACAAGTA+TGG | 0.483562 | 3_4:+74807146 | None:intergenic |
| TAACTCAATCAAATGGTTTG+AGG | 0.487504 | 3_4:-74805035 | Msa0521860:CDS |
| ATGAACCAATTTCTTTCCAT+CGG | 0.488762 | 3_4:+74805596 | None:intergenic |
| GAGGGTGTCTACATTAGAAA+TGG | 0.489802 | 3_4:-74807099 | Msa0521860:intron |
| GCAATGCTAACTCAATCAAA+TGG | 0.498781 | 3_4:-74805042 | Msa0521860:CDS |
| AAGTTGATATCAAACTAAAC+AGG | 0.498972 | 3_4:-74805572 | Msa0521860:CDS |
| CTGTTTAGATCAATGGTTAG+TGG | 0.499613 | 3_4:+74805234 | None:intergenic |
| TGAGTGGTAGAGCTTGCAAT+AGG | 0.500342 | 3_4:+74804403 | None:intergenic |
| TGTCTTGCAGAGTTCCATAT+GGG | 0.505851 | 3_4:-74803790 | Msa0521860:CDS |
| TGGCGATTGAATATGCAAAC+TGG | 0.506886 | 3_4:-74804541 | Msa0521860:CDS |
| TTTCTAATGTAGACACCCTC+TGG | 0.507299 | 3_4:+74807102 | None:intergenic |
| GTCTGCTTATCTCTTCAACT+GGG | 0.507443 | 3_4:-74806221 | Msa0521860:intron |
| CTGGAAGGAGATTGGCATGA+AGG | 0.511737 | 3_4:+74803757 | None:intergenic |
| AAGGCTCCATGAAACCCATA+TGG | 0.513364 | 3_4:+74803776 | None:intergenic |
| TCTTCGACACCTTCATCTCT+AGG | 0.513776 | 3_4:+74804010 | None:intergenic |
| CACAGAAAGCTCCAATTACA+GGG | 0.517389 | 3_4:-74805768 | Msa0521860:intron |
| AAGGAGACTTCAGGTAGAGC+TGG | 0.517891 | 3_4:+74807386 | None:intergenic |
| TAACAACAAGCACGTTGAAA+CGG | 0.518758 | 3_4:-74806320 | Msa0521860:CDS |
| TTAGATGTGCCAAAATATAG+AGG | 0.521086 | 3_4:-74804266 | Msa0521860:intron |
| GTTAAGGAGAAAGATCTTTG+TGG | 0.523151 | 3_4:-74804514 | Msa0521860:CDS |
| CATATTTGGGTGGAAGGAGA+AGG | 0.530916 | 3_4:-74806400 | Msa0521860:CDS |
| TCAAGTCATATTTGGGTGGA+AGG | 0.542158 | 3_4:-74806406 | Msa0521860:CDS |
| ATACTTGTGACTTGCATCCA+TGG | 0.543461 | 3_4:-74807144 | Msa0521860:CDS |
| GTAGAGTAACTTTGCTCCTG+TGG | 0.544515 | 3_4:-74807184 | Msa0521860:intron |
| GTAAATTGTTGCATTCAGAA+AGG | 0.545282 | 3_4:-74807556 | Msa0521860:CDS |
| CGAGTTCAAAAGAATTTGAG+TGG | 0.546001 | 3_4:-74804582 | Msa0521860:CDS |
| AAAAGACGAACCTATAAGGA+TGG | 0.547696 | 3_4:-74804083 | Msa0521860:CDS |
| ATTGGGAACTCAGTGCAGCT+TGG | 0.554608 | 3_4:-74805920 | Msa0521860:CDS |
| GATCTAAACAGACTTCTAAG+AGG | 0.558606 | 3_4:-74805222 | Msa0521860:CDS |
| TGCAGAATTATCTATGTCAA+AGG | 0.558983 | 3_4:-74804213 | Msa0521860:intron |
| CTCAATCAAATGGTTTGAGG+TGG | 0.560444 | 3_4:-74805032 | Msa0521860:CDS |
| TGTAGTCTTTGCCATGACAT+AGG | 0.566145 | 3_4:-74805549 | Msa0521860:CDS |
| GCTTCCTCCAACTCTTCCAC+AGG | 0.568006 | 3_4:+74807168 | None:intergenic |
| TCCTGAATGCTCAAACACAT+TGG | 0.571180 | 3_4:+74806013 | None:intergenic |
| AATCATTAGGAATTCGTCCA+TGG | 0.575693 | 3_4:+74807127 | None:intergenic |
| ATGATAGGAAAGAATATGCA+AGG | 0.577233 | 3_4:-74805087 | Msa0521860:CDS |
| GAAAGAATATGCAAGGATTG+GGG | 0.577458 | 3_4:-74805080 | Msa0521860:CDS |
| AGTGAATTGCCATCTATGGC+AGG | 0.578441 | 3_4:+74806253 | None:intergenic |
| GGATCAACAGGTTGTAGTGA+GGG | 0.582027 | 3_4:-74804644 | Msa0521860:intron |
| TCATTGTTAATTACCTTGAG+TGG | 0.583765 | 3_4:+74804387 | None:intergenic |
| GTGTCGAAGAAGATGATGGT+TGG | 0.584534 | 3_4:-74803997 | Msa0521860:CDS |
| ATTGGGGTAATGCCACGCTA+TGG | 0.586172 | 3_4:-74805064 | Msa0521860:CDS |
| ATTGCAAGCTCTACCACTCA+AGG | 0.608198 | 3_4:-74804400 | Msa0521860:intron |
| TATACCTTAGATGGAAGCAA+TGG | 0.611961 | 3_4:+74807275 | None:intergenic |
| TTTGTGTAACACCTATGTCA+TGG | 0.612387 | 3_4:+74805538 | None:intergenic |
| GAGTTAGCATTGCCATAGCG+TGG | 0.622537 | 3_4:+74805052 | None:intergenic |
| ATTGAATATGCAAACTGGAG+AGG | 0.626317 | 3_4:-74804536 | Msa0521860:CDS |
| TCTATGGCAGGCAGAAACAA+TGG | 0.628858 | 3_4:+74806265 | None:intergenic |
| GAAGGTGTCGAAGAAGATGA+TGG | 0.631577 | 3_4:-74804001 | Msa0521860:CDS |
| GGAGCTAGTTACATTAGGTG+TGG | 0.635928 | 3_4:-74805746 | Msa0521860:CDS |
| TAGATCAAGTCATATTTGGG+TGG | 0.640358 | 3_4:-74806410 | Msa0521860:CDS |
| ACCTTCATCTCTAGGCACAA+AGG | 0.642379 | 3_4:+74804018 | None:intergenic |
| ACCAGAAATAATTCCAACCA+CGG | 0.644539 | 3_4:+74805705 | None:intergenic |
| CTAAACAGACTTCTAAGAGG+AGG | 0.658104 | 3_4:-74805219 | Msa0521860:CDS |
| TGGATCAACAGGTTGTAGTG+AGG | 0.666393 | 3_4:-74804645 | Msa0521860:intron |
| ATGACATAGGTGTTACACAA+AGG | 0.697603 | 3_4:-74805536 | Msa0521860:intron |
| GATCAACAGGTTGTAGTGAG+GGG | 0.719118 | 3_4:-74804643 | Msa0521860:intron |
| ACAGAAAGCTCCAATTACAG+GGG | 0.725997 | 3_4:-74805767 | Msa0521860:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTAAAAAATCAAATCA+TGG | - | chr3_4:74804973-74804992 | Msa0521860:intron | 10.0% |
| !!! | AATGTAAAATATGTTTTTTA+TGG | - | chr3_4:74806040-74806059 | Msa0521860:CDS | 10.0% |
| !!! | ATGTAAAATATGTTTTTTAT+GGG | - | chr3_4:74806041-74806060 | Msa0521860:CDS | 10.0% |
| !!! | TTTTCATATAAGTTAAAATA+AGG | - | chr3_4:74806490-74806509 | Msa0521860:intron | 10.0% |
| !! | TTTAGATAGTATATAATCAA+AGG | - | chr3_4:74804314-74804333 | Msa0521860:intron | 15.0% |
| !! | TTAGATAGTATATAATCAAA+GGG | - | chr3_4:74804315-74804334 | Msa0521860:intron | 15.0% |
| !! | ATTTGCAAAGTAAATATAAT+AGG | + | chr3_4:74805481-74805500 | None:intergenic | 15.0% |
| !!! | TTTTACATTGCATTTTTTTT+TGG | + | chr3_4:74806029-74806048 | None:intergenic | 15.0% |
| !!! | TATTTAGTTTATTCATGTTT+AGG | - | chr3_4:74806168-74806187 | Msa0521860:intron | 15.0% |
| !!! | ATTTAGTTTATTCATGTTTA+GGG | - | chr3_4:74806169-74806188 | Msa0521860:intron | 15.0% |
| !! | TTCAAATAAGTTAATTCAAA+AGG | - | chr3_4:74806596-74806615 | Msa0521860:intron | 15.0% |
| !! | TTGGTTATTATTAGAATAAA+AGG | - | chr3_4:74806632-74806651 | Msa0521860:intron | 15.0% |
| !! | TGGTTATTATTAGAATAAAA+GGG | - | chr3_4:74806633-74806652 | Msa0521860:intron | 15.0% |
| !! | TCCATTATTATTGTATGAAA+TGG | + | chr3_4:74803752-74803771 | None:intergenic | 20.0% |
| !!! | ACAGTATTTTTCATAGTTTT+GGG | + | chr3_4:74803987-74804006 | None:intergenic | 20.0% |
| !! | TTATACATATATACCTTAGA+TGG | + | chr3_4:74804071-74804090 | None:intergenic | 20.0% |
| !!! | TTGGATTTTTATTTTTTAGC+CGG | - | chr3_4:74804513-74804532 | Msa0521860:CDS | 20.0% |
| !!! | TTCATTGTTATAGTGTTTTT+AGG | - | chr3_4:74804556-74804575 | Msa0521860:CDS | 20.0% |
| !! | CTTAATATATGTATTGCTAA+TGG | - | chr3_4:74804829-74804848 | Msa0521860:intron | 20.0% |
| !! | AAATCAACAAATTCTATCTT+TGG | - | chr3_4:74804901-74804920 | Msa0521860:intron | 20.0% |
| !! | ATTCTAACGAAAAATGAATT+AGG | + | chr3_4:74805146-74805165 | None:intergenic | 20.0% |
| !! | CTTGAAAACTTTAAACAATT+GGG | - | chr3_4:74805397-74805416 | Msa0521860:intron | 20.0% |
| !! | ATATTACAAAACTAGTTCAT+AGG | - | chr3_4:74805879-74805898 | Msa0521860:intron | 20.0% |
| !! | TATTACAAAACTAGTTCATA+GGG | - | chr3_4:74805880-74805899 | Msa0521860:intron | 20.0% |
| !!! | AATGCGTATGTATTTTATAT+CGG | + | chr3_4:74806003-74806022 | None:intergenic | 20.0% |
| !! | ACATGAATAAACTAAATAGA+AGG | + | chr3_4:74806166-74806185 | None:intergenic | 20.0% |
| !! | GTAGATTAATAAAGTATGAT+AGG | - | chr3_4:74806232-74806251 | Msa0521860:CDS | 20.0% |
| !! | AATCATTTATATAGTACTTC+AGG | + | chr3_4:74806390-74806409 | None:intergenic | 20.0% |
| !!! | GAAGTACTATATAAATGATT+CGG | - | chr3_4:74806390-74806409 | Msa0521860:CDS | 20.0% |
| !! | TAATTATATGCAAGATTGTT+TGG | + | chr3_4:74806562-74806581 | None:intergenic | 20.0% |
| !!! | ATTTATATAGAAAGTACGAA+AGG | + | chr3_4:74807018-74807037 | None:intergenic | 20.0% |
| !! | AATTATATGAAATTACCACT+AGG | + | chr3_4:74807178-74807197 | None:intergenic | 20.0% |
| ! | GCCATTTCATACAATAATAA+TGG | - | chr3_4:74803748-74803767 | Msa0521860:CDS | 25.0% |
| !!! | TGTTTTAACACATTTTTCAC+TGG | - | chr3_4:74803879-74803898 | Msa0521860:intron | 25.0% |
| !! | CACAGTATTTTTCATAGTTT+TGG | + | chr3_4:74803988-74804007 | None:intergenic | 25.0% |
| ! | CAAAACTATGAAAAATACTG+TGG | - | chr3_4:74803986-74804005 | Msa0521860:CDS | 25.0% |
| !! | TAAATTGATTGACGTTTTTG+TGG | - | chr3_4:74804010-74804029 | Msa0521860:CDS | 25.0% |
| ! | AACACTATAACAATGAATAC+AGG | + | chr3_4:74804553-74804572 | None:intergenic | 25.0% |
| ! | TCAAACTCGTTATATTTGTA+TGG | + | chr3_4:74804763-74804782 | None:intergenic | 25.0% |
| ! | CAATACATATATTAAGTGTC+AGG | + | chr3_4:74804825-74804844 | None:intergenic | 25.0% |
| ! | TACATTGATATATAATGTGC+AGG | - | chr3_4:74804853-74804872 | Msa0521860:intron | 25.0% |
| ! | AAAAATCAAATCATGGAAGT+TGG | - | chr3_4:74804980-74804999 | Msa0521860:intron | 25.0% |
| ! | GAAAAAATATCAATCTCTTG+TGG | + | chr3_4:74805377-74805396 | None:intergenic | 25.0% |
| !!! | CCAATTGTTTAAAGTTTTCA+AGG | + | chr3_4:74805399-74805418 | None:intergenic | 25.0% |
| ! | CCTTGAAAACTTTAAACAAT+TGG | - | chr3_4:74805396-74805415 | Msa0521860:intron | 25.0% |
| !!! | TATTTTTTTTTTTCAGCCGA+TGG | - | chr3_4:74805722-74805741 | Msa0521860:CDS | 25.0% |
| !!! | AAGTTGATATCAAACTAAAC+AGG | - | chr3_4:74805762-74805781 | Msa0521860:CDS | 25.0% |
| !! | ATGCGTATGTATTTTATATC+GGG | + | chr3_4:74806002-74806021 | None:intergenic | 25.0% |
| !!! | TTTATGGGAAATTTTTTTGC+AGG | - | chr3_4:74806056-74806075 | Msa0521860:intron | 25.0% |
| ! | AAAAGGCTCAAATCATATAT+TGG | - | chr3_4:74806613-74806632 | Msa0521860:intron | 25.0% |
| ! | ATAGGAAAATCCATATAAAC+TGG | + | chr3_4:74806853-74806872 | None:intergenic | 25.0% |
| !! | ACAAAGTTTTCATTGATCAT+AGG | + | chr3_4:74806871-74806890 | None:intergenic | 25.0% |
| ! | ATGATCAATGAAAACTTTGT+TGG | - | chr3_4:74806871-74806890 | Msa0521860:intron | 25.0% |
| ! | AATTACATGTTACAATTCTC+TGG | + | chr3_4:74806993-74807012 | None:intergenic | 25.0% |
| ! | TTATCTATGTCAAAGGTAAA+AGG | - | chr3_4:74807128-74807147 | Msa0521860:CDS | 25.0% |
| !! | CATTGATAATAATGCTACTA+AGG | + | chr3_4:74807201-74807220 | None:intergenic | 25.0% |
| ! | ATGTATTCTTCTCAAACATA+TGG | + | chr3_4:74807281-74807300 | None:intergenic | 25.0% |
| !! | AGAAGAATACATTTTGCAAT+GGG | - | chr3_4:74807289-74807308 | Msa0521860:CDS | 25.0% |
| !!! | ACATTTATCGATTTTCTTTC+AGG | - | chr3_4:74807467-74807486 | Msa0521860:intron | 25.0% |
| !!! | AAAGAATTTTTCTAGCGATA+CGG | - | chr3_4:74807506-74807525 | Msa0521860:intron | 25.0% |
| GTAAATTGTTGCATTCAGAA+AGG | - | chr3_4:74803778-74803797 | Msa0521860:CDS | 30.0% | |
| !!! | TCCACTCTTCTCTATTTTTA+AGG | - | chr3_4:74803822-74803841 | Msa0521860:CDS | 30.0% |
| ACCTTAAAAATAGAGAAGAG+TGG | + | chr3_4:74803826-74803845 | None:intergenic | 30.0% | |
| ! | TTTGGGAACATCAATTTTCA+AGG | + | chr3_4:74803970-74803989 | None:intergenic | 30.0% |
| ! | AATTCCTAATGATTTTCCAG+AGG | - | chr3_4:74804216-74804235 | Msa0521860:CDS | 30.0% |
| ! | ATTCCTAATGATTTTCCAGA+GGG | - | chr3_4:74804217-74804236 | Msa0521860:CDS | 30.0% |
| ! | TAGCTTGATGATCAATTCAA+GGG | - | chr3_4:74804367-74804386 | Msa0521860:intron | 30.0% |
| !! | TTCAACCATTGATTTGAGAT+CGG | - | chr3_4:74804584-74804603 | Msa0521860:CDS | 30.0% |
| TATATTAAGTGTCAGGCTTA+TGG | + | chr3_4:74804818-74804837 | None:intergenic | 30.0% | |
| TTGGTAGATCAAGTCATATT+TGG | - | chr3_4:74804920-74804939 | Msa0521860:intron | 30.0% | |
| TGGTAGATCAAGTCATATTT+GGG | - | chr3_4:74804921-74804940 | Msa0521860:intron | 30.0% | |
| !!! | TTGCTGTTTCGTAATTTTAG+AGG | + | chr3_4:74805182-74805201 | None:intergenic | 30.0% |
| GTTCATAATACCGTCTTTAA+GGG | + | chr3_4:74805234-74805253 | None:intergenic | 30.0% | |
| AGTTCATAATACCGTCTTTA+AGG | + | chr3_4:74805235-74805254 | None:intergenic | 30.0% | |
| ACTCATTTGGTTAAATCTTG+TGG | - | chr3_4:74805252-74805271 | Msa0521860:CDS | 30.0% | |
| AAACCAAAAAAACCTTTGGA+TGG | + | chr3_4:74805457-74805476 | None:intergenic | 30.0% | |
| AGGTAAACCAAAAAAACCTT+TGG | + | chr3_4:74805461-74805480 | None:intergenic | 30.0% | |
| ATGAACCAATTTCTTTCCAT+CGG | + | chr3_4:74805741-74805760 | None:intergenic | 30.0% | |
| TAGAAGTCTGTTTAGATCAA+TGG | + | chr3_4:74806110-74806129 | None:intergenic | 30.0% | |
| ATGATAGGAAAGAATATGCA+AGG | - | chr3_4:74806247-74806266 | Msa0521860:CDS | 30.0% | |
| TAACTCAATCAAATGGTTTG+AGG | - | chr3_4:74806299-74806318 | Msa0521860:CDS | 30.0% | |
| ACAATGTGAAATGTGCAATT+AGG | + | chr3_4:74806330-74806349 | None:intergenic | 30.0% | |
| ! | TCACATTGTCAATTCTTTTG+AGG | - | chr3_4:74806341-74806360 | Msa0521860:CDS | 30.0% |
| !! | ATTGTCAATTCTTTTGAGGA+TGG | - | chr3_4:74806345-74806364 | Msa0521860:CDS | 30.0% |
| ! | CACTCAAATTCTTTTGAACT+CGG | + | chr3_4:74806754-74806773 | None:intergenic | 30.0% |
| TCATTGTTAATTACCTTGAG+TGG | + | chr3_4:74806950-74806969 | None:intergenic | 30.0% | |
| TTAGATGTGCCAAAATATAG+AGG | - | chr3_4:74807068-74807087 | Msa0521860:intron | 30.0% | |
| ! | TTAGCTAGACCTCTATATTT+TGG | + | chr3_4:74807080-74807099 | None:intergenic | 30.0% |
| TGCAGAATTATCTATGTCAA+AGG | - | chr3_4:74807121-74807140 | Msa0521860:CDS | 30.0% | |
| ! | TTAACATTTCCTTTTCCTAG+TGG | - | chr3_4:74807160-74807179 | Msa0521860:CDS | 30.0% |
| ATGAAATTACCACTAGGAAA+AGG | + | chr3_4:74807172-74807191 | None:intergenic | 30.0% | |
| ATATGGTATTCCATCCTTAT+AGG | + | chr3_4:74807264-74807283 | None:intergenic | 30.0% | |
| ! | GAGAAGAATACATTTTGCAA+TGG | - | chr3_4:74807288-74807307 | Msa0521860:CDS | 30.0% |
| ! | GAAGAATACATTTTGCAATG+GGG | - | chr3_4:74807290-74807309 | Msa0521860:CDS | 30.0% |
| ! | TCTGCAAGACATTTCAATTT+TGG | + | chr3_4:74807535-74807554 | None:intergenic | 30.0% |
| !! | TCAATTTTCAAGGAGACTTC+AGG | + | chr3_4:74803960-74803979 | None:intergenic | 35.0% |
| TATACCTTAGATGGAAGCAA+TGG | + | chr3_4:74804062-74804081 | None:intergenic | 35.0% | |
| AATCATTAGGAATTCGTCCA+TGG | + | chr3_4:74804210-74804229 | None:intergenic | 35.0% | |
| ! | CTAGCTTGATGATCAATTCA+AGG | - | chr3_4:74804366-74804385 | Msa0521860:intron | 35.0% |
| TAGATCAAGTCATATTTGGG+TGG | - | chr3_4:74804924-74804943 | Msa0521860:intron | 35.0% | |
| TAACAACAAGCACGTTGAAA+CGG | - | chr3_4:74805014-74805033 | Msa0521860:CDS | 35.0% | |
| GAAGAGATAAGCAGACAAAA+TGG | + | chr3_4:74805109-74805128 | None:intergenic | 35.0% | |
| TCCCTTAAATTGAATGATGC+CGG | - | chr3_4:74805207-74805226 | Msa0521860:intron | 35.0% | |
| ACCGGCATCATTCAATTTAA+GGG | + | chr3_4:74805211-74805230 | None:intergenic | 35.0% | |
| GACGGTATTATGAACTCATT+TGG | - | chr3_4:74805239-74805258 | Msa0521860:CDS | 35.0% | |
| AATTGGAGCTTTCTGTGATA+TGG | + | chr3_4:74805563-74805582 | None:intergenic | 35.0% | |
| ACCAGAAATAATTCCAACCA+CGG | + | chr3_4:74805632-74805651 | None:intergenic | 35.0% | |
| TTTGTGTAACACCTATGTCA+TGG | + | chr3_4:74805799-74805818 | None:intergenic | 35.0% | |
| ! | ATGACATAGGTGTTACACAA+AGG | - | chr3_4:74805798-74805817 | Msa0521860:intron | 35.0% |
| ! | ACGCAAGTCACTTTATATGT+AGG | - | chr3_4:74805956-74805975 | Msa0521860:CDS | 35.0% |
| CTGTTTAGATCAATGGTTAG+TGG | + | chr3_4:74806103-74806122 | None:intergenic | 35.0% | |
| GATCTAAACAGACTTCTAAG+AGG | - | chr3_4:74806112-74806131 | Msa0521860:intron | 35.0% | |
| TTCAGTTCATATGTACTCAC+TGG | + | chr3_4:74806141-74806160 | None:intergenic | 35.0% | |
| AGGAAAGAATATGCAAGGAT+TGG | - | chr3_4:74806252-74806271 | Msa0521860:CDS | 35.0% | |
| GGAAAGAATATGCAAGGATT+GGG | - | chr3_4:74806253-74806272 | Msa0521860:CDS | 35.0% | |
| GAAAGAATATGCAAGGATTG+GGG | - | chr3_4:74806254-74806273 | Msa0521860:CDS | 35.0% | |
| GCAATGCTAACTCAATCAAA+TGG | - | chr3_4:74806292-74806311 | Msa0521860:CDS | 35.0% | |
| !! | ATAAATGATTCGGTGCTGTT+TGG | - | chr3_4:74806400-74806419 | Msa0521860:CDS | 35.0% |
| AGATTGTTTGGAAGAGCTTA+TGG | + | chr3_4:74806550-74806569 | None:intergenic | 35.0% | |
| ! | AGGGCTGCATTAAATTTTGA+AGG | - | chr3_4:74806652-74806671 | Msa0521860:intron | 35.0% |
| ! | AATTCTTTTGAACTCGGATC+AGG | + | chr3_4:74806748-74806767 | None:intergenic | 35.0% |
| CGAGTTCAAAAGAATTTGAG+TGG | - | chr3_4:74806752-74806771 | Msa0521860:intron | 35.0% | |
| ATTGAATATGCAAACTGGAG+AGG | - | chr3_4:74806798-74806817 | Msa0521860:intron | 35.0% | |
| GTTAAGGAGAAAGATCTTTG+TGG | - | chr3_4:74806820-74806839 | Msa0521860:intron | 35.0% | |
| TGGTGACAAACCAGTTTATA+TGG | - | chr3_4:74806840-74806859 | Msa0521860:intron | 35.0% | |
| GAGAAAAAGACGAACCTATA+AGG | - | chr3_4:74807247-74807266 | Msa0521860:intron | 35.0% | |
| AAAAGACGAACCTATAAGGA+TGG | - | chr3_4:74807251-74807270 | Msa0521860:intron | 35.0% | |
| GATACTAACACATCTCAAGT+AGG | - | chr3_4:74807384-74807403 | Msa0521860:CDS | 35.0% | |
| TAATAATCCTGGAAGGAGAT+TGG | + | chr3_4:74807588-74807607 | None:intergenic | 35.0% | |
| TACTCTACAGCACATTGAAC+AGG | + | chr3_4:74804138-74804157 | None:intergenic | 40.0% | |
| ATGGATGCAAGTCACAAGTA+TGG | + | chr3_4:74804191-74804210 | None:intergenic | 40.0% | |
| ! | ATACTTGTGACTTGCATCCA+TGG | - | chr3_4:74804190-74804209 | Msa0521860:intron | 40.0% |
| ! | ACACCCTCTGGAAAATCATT+AGG | + | chr3_4:74804223-74804242 | None:intergenic | 40.0% |
| TTTCTAATGTAGACACCCTC+TGG | + | chr3_4:74804235-74804254 | None:intergenic | 40.0% | |
| !! | GAGGGTGTCTACATTAGAAA+TGG | - | chr3_4:74804235-74804254 | Msa0521860:CDS | 40.0% |
| CAACACAAACGCATGATACT+TGG | - | chr3_4:74804494-74804513 | Msa0521860:CDS | 40.0% | |
| ! | TTTTAGCCGGTCAACTTAGA+TGG | - | chr3_4:74804526-74804545 | Msa0521860:CDS | 40.0% |
| ACTGTCCGATCTCAAATCAA+TGG | + | chr3_4:74804592-74804611 | None:intergenic | 40.0% | |
| CCAATCGAAATAAACGATCG+AGG | + | chr3_4:74804650-74804669 | None:intergenic | 40.0% | |
| CCTCGATCGTTTATTTCGAT+TGG | - | chr3_4:74804647-74804666 | Msa0521860:intron | 40.0% | |
| ! | AGTCCTCCAAAAAGTGGATT+TGG | + | chr3_4:74804880-74804899 | None:intergenic | 40.0% |
| GATTTCAGTCCTCCAAAAAG+TGG | + | chr3_4:74804886-74804905 | None:intergenic | 40.0% | |
| TCAAGTCATATTTGGGTGGA+AGG | - | chr3_4:74804928-74804947 | Msa0521860:intron | 40.0% | |
| !! | CAACGTGCTTGTTGTTATAG+AGG | + | chr3_4:74805011-74805030 | None:intergenic | 40.0% |
| TGTCTGCTTATCTCTTCAAC+TGG | - | chr3_4:74805112-74805131 | Msa0521860:intron | 40.0% | |
| GTCTGCTTATCTCTTCAACT+GGG | - | chr3_4:74805113-74805132 | Msa0521860:intron | 40.0% | |
| GACCGGCATCATTCAATTTA+AGG | + | chr3_4:74805212-74805231 | None:intergenic | 40.0% | |
| ! | TAATACCGTCTTTAAGGGAC+CGG | + | chr3_4:74805229-74805248 | None:intergenic | 40.0% |
| TGGACTTAACAGTTGAGATC+TGG | - | chr3_4:74805272-74805291 | Msa0521860:intron | 40.0% | |
| ACCAATGTGTTTGAGCATTC+AGG | - | chr3_4:74805320-74805339 | Msa0521860:intron | 40.0% | |
| TCCTGAATGCTCAAACACAT+TGG | + | chr3_4:74805324-74805343 | None:intergenic | 40.0% | |
| CAAAAAAACCTTTGGATGGC+TGG | + | chr3_4:74805453-74805472 | None:intergenic | 40.0% | |
| !!! | CAGCCATCCAAAGGTTTTTT+TGG | - | chr3_4:74805451-74805470 | Msa0521860:intron | 40.0% |
| TCACAGAAAGCTCCAATTAC+AGG | - | chr3_4:74805565-74805584 | Msa0521860:CDS | 40.0% | |
| CACAGAAAGCTCCAATTACA+GGG | - | chr3_4:74805566-74805585 | Msa0521860:CDS | 40.0% | |
| ACAGAAAGCTCCAATTACAG+GGG | - | chr3_4:74805567-74805586 | Msa0521860:CDS | 40.0% | |
| ATAATTCCAACCACGGCAAA+AGG | + | chr3_4:74805625-74805644 | None:intergenic | 40.0% | |
| TTCAGCCGATGGAAAGAAAT+TGG | - | chr3_4:74805733-74805752 | Msa0521860:CDS | 40.0% | |
| TGTAGTCTTTGCCATGACAT+AGG | - | chr3_4:74805785-74805804 | Msa0521860:intron | 40.0% | |
| TTGCAGGTACAATGTGATCA+TGG | - | chr3_4:74806072-74806091 | Msa0521860:intron | 40.0% | |
| ! | CTAAACAGACTTCTAAGAGG+AGG | - | chr3_4:74806115-74806134 | Msa0521860:intron | 40.0% |
| CTCAATCAAATGGTTTGAGG+TGG | - | chr3_4:74806302-74806321 | Msa0521860:CDS | 40.0% | |
| !! | TTCTTTTGAGGATGGAGATG+AGG | - | chr3_4:74806353-74806372 | Msa0521860:CDS | 40.0% |
| ! | TGAAGGCATGTCTAATTGTG+TGG | - | chr3_4:74806669-74806688 | Msa0521860:intron | 40.0% |
| GTCTAATTGTGTGGATCAAC+AGG | - | chr3_4:74806678-74806697 | Msa0521860:intron | 40.0% | |
| GGTTATCTCGTTGTCATGAA+TGG | - | chr3_4:74806773-74806792 | Msa0521860:intron | 40.0% | |
| TGGCGATTGAATATGCAAAC+TGG | - | chr3_4:74806793-74806812 | Msa0521860:intron | 40.0% | |
| TATGCAAACTGGAGAGGTTA+AGG | - | chr3_4:74806804-74806823 | Msa0521860:intron | 40.0% | |
| ATGTCTTGCAGAGTTCCATA+TGG | - | chr3_4:74807543-74807562 | Msa0521860:CDS | 40.0% | |
| TGTCTTGCAGAGTTCCATAT+GGG | - | chr3_4:74807544-74807563 | Msa0521860:CDS | 40.0% | |
| AGAGTTCCATATGGGTTTCA+TGG | - | chr3_4:74807552-74807571 | Msa0521860:CDS | 40.0% | |
| CAAGCCATTGCTTCCATCTA+AGG | - | chr3_4:74804055-74804074 | Msa0521860:CDS | 45.0% | |
| GTAGAGTAACTTTGCTCCTG+TGG | - | chr3_4:74804150-74804169 | Msa0521860:intron | 45.0% | |
| TGCGATAAACTCCATTCCCT+AGG | - | chr3_4:74804398-74804417 | Msa0521860:intron | 45.0% | |
| ! | ACAGGTCCATCTAAGTTGAC+CGG | + | chr3_4:74804535-74804554 | None:intergenic | 45.0% |
| !! | GCAGGACCAAATCCACTTTT+TGG | - | chr3_4:74804871-74804890 | Msa0521860:intron | 45.0% |
| !!! | GGACCAAATCCACTTTTTGG+AGG | - | chr3_4:74804874-74804893 | Msa0521860:intron | 45.0% |
| CATATTTGGGTGGAAGGAGA+AGG | - | chr3_4:74804934-74804953 | Msa0521860:intron | 45.0% | |
| TCTATGGCAGGCAGAAACAA+TGG | + | chr3_4:74805072-74805091 | None:intergenic | 45.0% | |
| !! | TTGTTTCTGCCTGCCATAGA+TGG | - | chr3_4:74805072-74805091 | Msa0521860:CDS | 45.0% |
| AGTGAATTGCCATCTATGGC+AGG | + | chr3_4:74805084-74805103 | None:intergenic | 45.0% | |
| ! | ACCTTTTACCAGCCATCCAA+AGG | - | chr3_4:74805442-74805461 | Msa0521860:intron | 45.0% |
| ACCTTTGGATGGCTGGTAAA+AGG | + | chr3_4:74805446-74805465 | None:intergenic | 45.0% | |
| GTAACTAGCTCCCCTGTAAT+TGG | + | chr3_4:74805580-74805599 | None:intergenic | 45.0% | |
| ACAGGGGAGCTAGTTACATT+AGG | - | chr3_4:74805583-74805602 | Msa0521860:CDS | 45.0% | |
| GGAGCTAGTTACATTAGGTG+TGG | - | chr3_4:74805588-74805607 | Msa0521860:CDS | 45.0% | |
| ! | ACCAGTTAAACCTTTTGCCG+TGG | - | chr3_4:74805612-74805631 | Msa0521860:intron | 45.0% |
| ACCACGGCAAAAGGTTTAAC+TGG | + | chr3_4:74805616-74805635 | None:intergenic | 45.0% | |
| ! | GTTAAACCTTTTGCCGTGGT+TGG | - | chr3_4:74805616-74805635 | Msa0521860:intron | 45.0% |
| GCCGTGGTTGGAATTATTTC+TGG | - | chr3_4:74805628-74805647 | Msa0521860:intron | 45.0% | |
| AACTAGTTCATAGGGCGAGA+AGG | - | chr3_4:74805888-74805907 | Msa0521860:intron | 45.0% | |
| TGGATCAACAGGTTGTAGTG+AGG | - | chr3_4:74806689-74806708 | Msa0521860:intron | 45.0% | |
| GGATCAACAGGTTGTAGTGA+GGG | - | chr3_4:74806690-74806709 | Msa0521860:intron | 45.0% | |
| GATCAACAGGTTGTAGTGAG+GGG | - | chr3_4:74806691-74806710 | Msa0521860:intron | 45.0% | |
| CGGATCAGGTTCAGGAATTA+AGG | + | chr3_4:74806734-74806753 | None:intergenic | 45.0% | |
| TTTGAACTCGGATCAGGTTC+AGG | + | chr3_4:74806742-74806761 | None:intergenic | 45.0% | |
| TGAGTGGTAGAGCTTGCAAT+AGG | + | chr3_4:74806934-74806953 | None:intergenic | 45.0% | |
| ATTGCAAGCTCTACCACTCA+AGG | - | chr3_4:74806934-74806953 | Msa0521860:intron | 45.0% | |
| ACCTTCATCTCTAGGCACAA+AGG | + | chr3_4:74807319-74807338 | None:intergenic | 45.0% | |
| TCTTCGACACCTTCATCTCT+AGG | + | chr3_4:74807327-74807346 | None:intergenic | 45.0% | |
| !! | GAAGGTGTCGAAGAAGATGA+TGG | - | chr3_4:74807333-74807352 | Msa0521860:CDS | 45.0% |
| ! | GTGTCGAAGAAGATGATGGT+TGG | - | chr3_4:74807337-74807356 | Msa0521860:CDS | 45.0% |
| AAGGCTCCATGAAACCCATA+TGG | + | chr3_4:74807561-74807580 | None:intergenic | 45.0% | |
| !! | CTATATAAATATTTATAATA+TGG | - | chr3_4:74807028-74807047 | Msa0521860:intron | 5.0% |
| AAGGAGACTTCAGGTAGAGC+TGG | + | chr3_4:74803951-74803970 | None:intergenic | 50.0% | |
| CTTTGCTCCTGTGGAAGAGT+TGG | - | chr3_4:74804159-74804178 | Msa0521860:intron | 50.0% | |
| TTCTCTCGTGTCCTAGGGAA+TGG | + | chr3_4:74804412-74804431 | None:intergenic | 50.0% | |
| ATTCCCTAGGACACGAGAGA+AGG | - | chr3_4:74804411-74804430 | Msa0521860:CDS | 50.0% | |
| GTTCCTTCTCTCGTGTCCTA+GGG | + | chr3_4:74804417-74804436 | None:intergenic | 50.0% | |
| AGTTCCTTCTCTCGTGTCCT+AGG | + | chr3_4:74804418-74804437 | None:intergenic | 50.0% | |
| GGCGAGTGAATTGCCATCTA+TGG | + | chr3_4:74805088-74805107 | None:intergenic | 50.0% | |
| TGATGCCGGTCCCTTAAAGA+CGG | - | chr3_4:74805221-74805240 | Msa0521860:CDS | 50.0% | |
| ATTGGGAACTCAGTGCAGCT+TGG | - | chr3_4:74805414-74805433 | Msa0521860:intron | 50.0% | |
| ATTGGGGTAATGCCACGCTA+TGG | - | chr3_4:74806270-74806289 | Msa0521860:CDS | 50.0% | |
| GAGTTAGCATTGCCATAGCG+TGG | + | chr3_4:74806285-74806304 | None:intergenic | 50.0% | |
| GCCTTTGTGCCTAGAGATGA+AGG | - | chr3_4:74807315-74807334 | Msa0521860:CDS | 50.0% | |
| CTGGAAGGAGATTGGCATGA+AGG | + | chr3_4:74807580-74807599 | None:intergenic | 50.0% | |
| CTTCATGCCAATCTCCTTCC+AGG | - | chr3_4:74807578-74807597 | Msa0521860:CDS | 50.0% | |
| TGCTCCTGTGGAAGAGTTGG+AGG | - | chr3_4:74804162-74804181 | Msa0521860:intron | 55.0% | |
| GCTTCCTCCAACTCTTCCAC+AGG | + | chr3_4:74804169-74804188 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 74803745 | 74807611 | 74803745 | ID=Msa0521860;Name=Msa0521860 |
| chr3_4 | mRNA | 74803745 | 74807611 | 74803745 | ID=Msa0521860-mRNA-1;Parent=Msa0521860;Name=Msa0521860-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.08|0|1|1|1|13|0|583 |
| chr3_4 | exon | 74807513 | 74807611 | 74807513 | ID=Msa0521860-mRNA-1:exon:21300;Parent=Msa0521860-mRNA-1 |
| chr3_4 | exon | 74807280 | 74807420 | 74807280 | ID=Msa0521860-mRNA-1:exon:21299;Parent=Msa0521860-mRNA-1 |
| chr3_4 | exon | 74807100 | 74807202 | 74807100 | ID=Msa0521860-mRNA-1:exon:21298;Parent=Msa0521860-mRNA-1 |
| chr3_4 | exon | 74806222 | 74806481 | 74806222 | ID=Msa0521860-mRNA-1:exon:21297;Parent=Msa0521860-mRNA-1 |
| chr3_4 | exon | 74805893 | 74806072 | 74805893 | ID=Msa0521860-mRNA-1:exon:21296;Parent=Msa0521860-mRNA-1 |
| chr3_4 | exon | 74805707 | 74805785 | 74805707 | ID=Msa0521860-mRNA-1:exon:21295;Parent=Msa0521860-mRNA-1 |
| chr3_4 | exon | 74805537 | 74805618 | 74805537 | ID=Msa0521860-mRNA-1:exon:21294;Parent=Msa0521860-mRNA-1 |
| chr3_4 | exon | 74805216 | 74805278 | 74805216 | ID=Msa0521860-mRNA-1:exon:21293;Parent=Msa0521860-mRNA-1 |
| chr3_4 | exon | 74804982 | 74805120 | 74804982 | ID=Msa0521860-mRNA-1:exon:21292;Parent=Msa0521860-mRNA-1 |
| chr3_4 | exon | 74804401 | 74804656 | 74804401 | ID=Msa0521860-mRNA-1:exon:21291;Parent=Msa0521860-mRNA-1 |
| chr3_4 | exon | 74804214 | 74804284 | 74804214 | ID=Msa0521860-mRNA-1:exon:21290;Parent=Msa0521860-mRNA-1 |
| chr3_4 | exon | 74803955 | 74804110 | 74803955 | ID=Msa0521860-mRNA-1:exon:21289;Parent=Msa0521860-mRNA-1 |
| chr3_4 | exon | 74803745 | 74803867 | 74803745 | ID=Msa0521860-mRNA-1:exon:21288;Parent=Msa0521860-mRNA-1 |
| chr3_4 | CDS | 74807513 | 74807611 | 74807513 | ID=Msa0521860-mRNA-1:cds;Parent=Msa0521860-mRNA-1 |
| chr3_4 | CDS | 74807280 | 74807420 | 74807280 | ID=Msa0521860-mRNA-1:cds;Parent=Msa0521860-mRNA-1 |
| chr3_4 | CDS | 74807100 | 74807202 | 74807100 | ID=Msa0521860-mRNA-1:cds;Parent=Msa0521860-mRNA-1 |
| chr3_4 | CDS | 74806222 | 74806481 | 74806222 | ID=Msa0521860-mRNA-1:cds;Parent=Msa0521860-mRNA-1 |
| chr3_4 | CDS | 74805893 | 74806072 | 74805893 | ID=Msa0521860-mRNA-1:cds;Parent=Msa0521860-mRNA-1 |
| chr3_4 | CDS | 74805707 | 74805785 | 74805707 | ID=Msa0521860-mRNA-1:cds;Parent=Msa0521860-mRNA-1 |
| chr3_4 | CDS | 74805537 | 74805618 | 74805537 | ID=Msa0521860-mRNA-1:cds;Parent=Msa0521860-mRNA-1 |
| chr3_4 | CDS | 74805216 | 74805278 | 74805216 | ID=Msa0521860-mRNA-1:cds;Parent=Msa0521860-mRNA-1 |
| chr3_4 | CDS | 74804982 | 74805120 | 74804982 | ID=Msa0521860-mRNA-1:cds;Parent=Msa0521860-mRNA-1 |
| chr3_4 | CDS | 74804401 | 74804656 | 74804401 | ID=Msa0521860-mRNA-1:cds;Parent=Msa0521860-mRNA-1 |
| chr3_4 | CDS | 74804214 | 74804284 | 74804214 | ID=Msa0521860-mRNA-1:cds;Parent=Msa0521860-mRNA-1 |
| chr3_4 | CDS | 74803955 | 74804110 | 74803955 | ID=Msa0521860-mRNA-1:cds;Parent=Msa0521860-mRNA-1 |
| chr3_4 | CDS | 74803745 | 74803867 | 74803745 | ID=Msa0521860-mRNA-1:cds;Parent=Msa0521860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
