Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0383590 | XP_013462024.1 | 95.540 | 583 | 25 | 1 | 1 | 583 | 5 | 586 | 0.0 | 1157 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0383590 | sp|Q94IR2|CCD1_PHAVU | 31.522 | 552 | 323 | 20 | 45 | 575 | 15 | 532 | 5.69e-68 | 233 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0383590 | A0A072V1Z3 | 95.540 | 583 | 25 | 1 | 1 | 583 | 5 | 586 | 0.0 | 1157 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006080 | Msa0383590 | 0.804052 | 2.599710e-49 | -8.615850e-47 |
| Msa0383590 | Msa0521860 | 0.845844 | 3.151313e-59 | -8.615850e-47 |
| Msa0383590 | Msa0685390 | -0.813021 | 3.159590e-51 | -8.615850e-47 |
| Msa0383590 | Msa0689610 | 0.800369 | 1.488381e-48 | -8.615850e-47 |
| Msa0383590 | Msa1356540 | 0.833232 | 6.001607e-56 | -8.615850e-47 |
| Msa0383590 | Msa1361980 | 0.814809 | 1.275330e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0383590 | MtrunA17_Chr3g0140121 | 95.540 | 583 | 25 | 1 | 1 | 583 | 5 | 586 | 0.0 | 1157 |
| Msa0383590 | MtrunA17_Chr8g0352261 | 31.703 | 511 | 301 | 16 | 81 | 575 | 86 | 564 | 1.33e-69 | 235 |
| Msa0383590 | MtrunA17_Chr8g0352301 | 31.009 | 545 | 325 | 17 | 50 | 575 | 52 | 564 | 1.28e-68 | 232 |
| Msa0383590 | MtrunA17_Chr8g0352321 | 30.952 | 546 | 326 | 18 | 50 | 575 | 15 | 529 | 7.18e-66 | 224 |
| Msa0383590 | MtrunA17_Chr8g0352311 | 30.092 | 545 | 330 | 17 | 50 | 575 | 53 | 565 | 1.30e-64 | 221 |
| Msa0383590 | MtrunA17_Chr5g0407951 | 28.807 | 545 | 312 | 19 | 58 | 575 | 75 | 570 | 2.16e-56 | 199 |
| Msa0383590 | MtrunA17_Chr5g0407941 | 28.257 | 545 | 314 | 19 | 58 | 575 | 74 | 568 | 6.41e-55 | 195 |
| Msa0383590 | MtrunA17_Chr8g0376401 | 29.457 | 516 | 300 | 19 | 75 | 575 | 131 | 597 | 4.60e-53 | 191 |
| Msa0383590 | MtrunA17_Chr5g0407931 | 26.888 | 543 | 324 | 17 | 58 | 575 | 115 | 609 | 3.86e-52 | 188 |
| Msa0383590 | MtrunA17_Chr2g0312951 | 27.831 | 521 | 306 | 21 | 75 | 575 | 131 | 601 | 3.36e-47 | 174 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0383590 | AT3G63520.1 | 31.760 | 551 | 312 | 23 | 50 | 575 | 16 | 527 | 8.91e-66 | 224 |
| Msa0383590 | AT4G19170.1 | 27.936 | 562 | 331 | 20 | 41 | 575 | 73 | 587 | 9.68e-57 | 201 |
| Msa0383590 | AT1G30100.1 | 29.688 | 512 | 295 | 20 | 82 | 575 | 116 | 580 | 5.57e-51 | 185 |
| Msa0383590 | AT3G14440.1 | 29.231 | 520 | 300 | 22 | 75 | 575 | 119 | 589 | 1.06e-50 | 184 |
| Msa0383590 | AT1G78390.1 | 30.116 | 518 | 295 | 23 | 75 | 575 | 179 | 646 | 3.89e-50 | 184 |
| Msa0383590 | AT4G18350.1 | 28.166 | 529 | 314 | 21 | 66 | 575 | 93 | 574 | 3.71e-46 | 171 |
| Msa0383590 | AT3G24220.1 | 27.556 | 577 | 333 | 24 | 36 | 575 | 39 | 567 | 3.72e-45 | 169 |
| Msa0383590 | AT4G32810.2 | 23.372 | 522 | 333 | 21 | 98 | 576 | 97 | 594 | 7.95e-14 | 74.7 |
Find 107 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCGTGGTTGGAATTATTTC+TGG | 0.150228 | 3_1:-86505111 | Msa0383590:intron |
| TCTGCAAGACATTTCAATTT+TGG | 0.150521 | 3_1:+86503208 | None:intergenic |
| TTAGCTAGACCTCTATATTT+TGG | 0.194225 | 3_1:+86503663 | None:intergenic |
| TTGGTAGATCAAGTCATATT+TGG | 0.213917 | 3_1:-86505818 | Msa0383590:CDS |
| TGGTGACAAACCAGTTTATA+TGG | 0.241863 | 3_1:-86503900 | Msa0383590:CDS |
| TTCAGCCGATGGAAAGAAAT+TGG | 0.243369 | 3_1:-86505007 | Msa0383590:intron |
| GCCATTTCATACAATAATAA+TGG | 0.270032 | 3_1:-86506994 | Msa0383590:CDS |
| CCTTGAAAACTTTAAACAAT+TGG | 0.286841 | 3_1:-86505342 | Msa0383590:CDS |
| AAATCAACAAATTCTATCTT+TGG | 0.288217 | 3_1:-86505837 | Msa0383590:CDS |
| GTAACTAGCTCCCCTGTAAT+TGG | 0.289575 | 3_1:+86505162 | None:intergenic |
| TGTCTGCTTATCTCTTCAAC+TGG | 0.296246 | 3_1:-86505626 | Msa0383590:CDS |
| CGGATCAGGTTCAGGAATTA+AGG | 0.302842 | 3_1:+86504009 | None:intergenic |
| CAAGCCATTGCTTCCATCTA+AGG | 0.303933 | 3_1:-86506687 | Msa0383590:intron |
| ATATGGTATTCCATCCTTAT+AGG | 0.314768 | 3_1:+86503479 | None:intergenic |
| TCCATTATTATTGTATGAAA+TGG | 0.328717 | 3_1:+86506993 | None:intergenic |
| ACAATGTGAAATGTGCAATT+AGG | 0.334412 | 3_1:+86504413 | None:intergenic |
| ACCACGGCAAAAGGTTTAAC+TGG | 0.338349 | 3_1:+86505126 | None:intergenic |
| TCACAGAAAGCTCCAATTAC+AGG | 0.344001 | 3_1:-86505174 | Msa0383590:intron |
| ACCAATGTGTTTGAGCATTC+AGG | 0.348877 | 3_1:-86505418 | Msa0383590:CDS |
| CTTCATGCCAATCTCATTCC+AGG | 0.352333 | 3_1:-86503162 | Msa0383590:CDS |
| TGGTAGATCAAGTCATATTT+GGG | 0.355936 | 3_1:-86505817 | Msa0383590:CDS |
| ACCTTTGGATGGCTAGTAAA+AGG | 0.356860 | 3_1:+86505295 | None:intergenic |
| TTATACATATATACCTTAGA+TGG | 0.357288 | 3_1:+86506674 | None:intergenic |
| TTTGAACTCGGATCAGGTTC+AGG | 0.357490 | 3_1:+86504001 | None:intergenic |
| TAGAAGTCTGTTTAGATCAA+TGG | 0.358208 | 3_1:+86504633 | None:intergenic |
| CTTGAAAACTTTAAACAATT+GGG | 0.359909 | 3_1:-86505341 | Msa0383590:CDS |
| TTGTTTCTGCCTGCCATAGA+AGG | 0.372415 | 3_1:-86505666 | Msa0383590:CDS |
| AGAGTTCCATATGGGTTTCA+TGG | 0.379567 | 3_1:-86503188 | Msa0383590:CDS |
| TATGCAAACTGGAGAGGTTA+AGG | 0.384542 | 3_1:-86503936 | Msa0383590:CDS |
| GGCGAGTGAATTGCCTTCTA+TGG | 0.387807 | 3_1:+86505653 | None:intergenic |
| ATAGGAAAATCCATATAAAC+TGG | 0.403573 | 3_1:+86503890 | None:intergenic |
| GGAAAGAATATGCAAGGATT+GGG | 0.405464 | 3_1:-86504487 | Msa0383590:CDS |
| ACAGGGGAGCTAGTTACATT+AGG | 0.407012 | 3_1:-86505156 | Msa0383590:CDS |
| ACACCCTCTGGAAAATCATT+AGG | 0.408667 | 3_1:+86506522 | None:intergenic |
| GTAGATTAATAAAGTATGAT+AGG | 0.417481 | 3_1:-86504508 | Msa0383590:intron |
| GAAGAGATAAGCAGACAAAA+TGG | 0.421406 | 3_1:+86505632 | None:intergenic |
| AGGAAAGAATATGCAAGGAT+TGG | 0.439667 | 3_1:-86504488 | Msa0383590:CDS |
| ATGTATTCTTCTCAAACATA+TGG | 0.440364 | 3_1:+86503462 | None:intergenic |
| ATGATCAATGAAAACTTTGT+TGG | 0.443863 | 3_1:-86503869 | Msa0383590:CDS |
| CAACGTGCTTGTTGTTATAG+AGG | 0.446103 | 3_1:+86505730 | None:intergenic |
| TAATAATCCTGGAATGAGAT+TGG | 0.446525 | 3_1:+86503155 | None:intergenic |
| ATAATTCCAACCACGGCAAA+AGG | 0.447479 | 3_1:+86505117 | None:intergenic |
| TGCTCCTGTGGAAGAGTTGG+AGG | 0.452956 | 3_1:-86506580 | Msa0383590:CDS |
| ATGTCTTGCAGAGTTCCATA+TGG | 0.467817 | 3_1:-86503197 | Msa0383590:CDS |
| TGGACTTAACAGTTGAGATC+TGG | 0.470277 | 3_1:-86505466 | Msa0383590:intron |
| CTTTGCTCCTGTGGAAGAGT+TGG | 0.475874 | 3_1:-86506583 | Msa0383590:CDS |
| TTGCAGGTACAATGTGATCA+TGG | 0.476501 | 3_1:-86504668 | Msa0383590:intron |
| GGTTATCTCGTTGTCATGAA+TGG | 0.476534 | 3_1:-86503967 | Msa0383590:CDS |
| GCCTTTGTGCCTAGAGATGA+AGG | 0.482935 | 3_1:-86503425 | Msa0383590:CDS |
| ATGGATGCAAGTCACAAGTA+TGG | 0.483562 | 3_1:+86506554 | None:intergenic |
| TAACTCAATCAAATGGTTTG+AGG | 0.487504 | 3_1:-86504441 | Msa0383590:CDS |
| ATGAACCAATTTCTTTCCAT+CGG | 0.488762 | 3_1:+86505002 | None:intergenic |
| GAGGGTGTCTACATTAGAAA+TGG | 0.489802 | 3_1:-86506507 | Msa0383590:intron |
| GCAATGCTAACTCAATCAAA+TGG | 0.498781 | 3_1:-86504448 | Msa0383590:CDS |
| AAGTTGATATCAAACTAAAC+AGG | 0.498972 | 3_1:-86504978 | Msa0383590:CDS |
| CTGTTTAGATCAATGGTTAG+TGG | 0.499613 | 3_1:+86504640 | None:intergenic |
| TGAGTGGTAGAGCTTGCAAT+AGG | 0.500342 | 3_1:+86503809 | None:intergenic |
| CTGGAATGAGATTGGCATGA+AGG | 0.503590 | 3_1:+86503163 | None:intergenic |
| TGTCTTGCAGAGTTCCATAT+GGG | 0.505851 | 3_1:-86503196 | Msa0383590:CDS |
| TGGCGATTGAATATGCAAAC+TGG | 0.506886 | 3_1:-86503947 | Msa0383590:CDS |
| TTTCTAATGTAGACACCCTC+TGG | 0.507299 | 3_1:+86506510 | None:intergenic |
| GTCTGCTTATCTCTTCAACT+GGG | 0.507443 | 3_1:-86505625 | Msa0383590:intron |
| AAGGCTCCATGAAACCCATA+TGG | 0.513364 | 3_1:+86503182 | None:intergenic |
| TCTTCGACACCTTCATCTCT+AGG | 0.513776 | 3_1:+86503416 | None:intergenic |
| CACAGAAAGCTCCAATTACA+GGG | 0.517389 | 3_1:-86505173 | Msa0383590:intron |
| AAGGAGACTTCAGGTAGAGC+TGG | 0.517891 | 3_1:+86506794 | None:intergenic |
| TAACAACAAGCACGTTGAAA+CGG | 0.518758 | 3_1:-86505724 | Msa0383590:CDS |
| TTAGATGTGCCAAAATATAG+AGG | 0.521086 | 3_1:-86503672 | Msa0383590:intron |
| GTTAAGGAGAAAGATCTTTG+TGG | 0.523151 | 3_1:-86503920 | Msa0383590:CDS |
| CATATTTGGGTGGAAGGAGA+AGG | 0.530916 | 3_1:-86505804 | Msa0383590:CDS |
| AGTGAATTGCCTTCTATGGC+AGG | 0.531982 | 3_1:+86505657 | None:intergenic |
| TCAAGTCATATTTGGGTGGA+AGG | 0.542158 | 3_1:-86505810 | Msa0383590:CDS |
| ATACTTGTGACTTGCATCCA+TGG | 0.543461 | 3_1:-86506552 | Msa0383590:CDS |
| GTAGAGTAACTTTGCTCCTG+TGG | 0.544515 | 3_1:-86506592 | Msa0383590:intron |
| CGAGTTCAAAAGAATTTGAG+TGG | 0.546001 | 3_1:-86503988 | Msa0383590:CDS |
| AAAAGACGAACCTATAAGGA+TGG | 0.547696 | 3_1:-86503489 | Msa0383590:CDS |
| ATTGGGAACTCAGTGCAGCT+TGG | 0.554608 | 3_1:-86505324 | Msa0383590:CDS |
| GATCTAAACAGACTTCTAAG+AGG | 0.558606 | 3_1:-86504628 | Msa0383590:CDS |
| TGCAGAATTATCTATGTCAA+AGG | 0.558983 | 3_1:-86503619 | Msa0383590:intron |
| CTCAATCAAATGGTTTGAGG+TGG | 0.560444 | 3_1:-86504438 | Msa0383590:CDS |
| TGTAGTCTTTGCCATGACAT+AGG | 0.566145 | 3_1:-86504955 | Msa0383590:CDS |
| GCTTCCTCCAACTCTTCCAC+AGG | 0.568006 | 3_1:+86506576 | None:intergenic |
| TCCTGAATGCTCAAACACAT+TGG | 0.571180 | 3_1:+86505417 | None:intergenic |
| AATCATTAGGAATTCGTCCA+TGG | 0.575693 | 3_1:+86506535 | None:intergenic |
| ATGATAGGAAAGAATATGCA+AGG | 0.577233 | 3_1:-86504493 | Msa0383590:CDS |
| GAAAGAATATGCAAGGATTG+GGG | 0.577458 | 3_1:-86504486 | Msa0383590:CDS |
| GGATCAACAGGTTGTAGTGA+GGG | 0.582027 | 3_1:-86504050 | Msa0383590:intron |
| TCATTGTTAATTACCTTGAG+TGG | 0.583765 | 3_1:+86503793 | None:intergenic |
| GTGTCGAAGAAGATGATGGT+TGG | 0.584534 | 3_1:-86503403 | Msa0383590:CDS |
| ATTGGGGTAATGCCACGCTA+TGG | 0.586172 | 3_1:-86504470 | Msa0383590:CDS |
| GTAAATCGTTGCATTCAGAA+AGG | 0.593636 | 3_1:-86506964 | Msa0383590:CDS |
| TCTATGGCAGGCAGAAACAA+TGG | 0.606534 | 3_1:+86505669 | None:intergenic |
| ATTGCAAGCTCTACCACTCA+AGG | 0.608198 | 3_1:-86503806 | Msa0383590:intron |
| TATACCTTAGATGGAAGCAA+TGG | 0.611961 | 3_1:+86506683 | None:intergenic |
| TTTGTGTAACACCTATGTCA+TGG | 0.612387 | 3_1:+86504944 | None:intergenic |
| GAGTTAGCATTGCCATAGCG+TGG | 0.622537 | 3_1:+86504458 | None:intergenic |
| ATTGAATATGCAAACTGGAG+AGG | 0.626317 | 3_1:-86503942 | Msa0383590:CDS |
| GAAGGTGTCGAAGAAGATGA+TGG | 0.631577 | 3_1:-86503407 | Msa0383590:CDS |
| GGAGCTAGTTACATTAGGTG+TGG | 0.635928 | 3_1:-86505151 | Msa0383590:CDS |
| TAGATCAAGTCATATTTGGG+TGG | 0.640358 | 3_1:-86505814 | Msa0383590:CDS |
| ACCTTCATCTCTAGGCACAA+AGG | 0.642379 | 3_1:+86503424 | None:intergenic |
| ACCAGAAATAATTCCAACCA+CGG | 0.644539 | 3_1:+86505110 | None:intergenic |
| CTAAACAGACTTCTAAGAGG+AGG | 0.658104 | 3_1:-86504625 | Msa0383590:CDS |
| TGGATCAACAGGTTGTAGTG+AGG | 0.666393 | 3_1:-86504051 | Msa0383590:intron |
| ATGACATAGGTGTTACACAA+AGG | 0.697603 | 3_1:-86504942 | Msa0383590:intron |
| GATCAACAGGTTGTAGTGAG+GGG | 0.719118 | 3_1:-86504049 | Msa0383590:intron |
| ACAGAAAGCTCCAATTACAG+GGG | 0.725997 | 3_1:-86505172 | Msa0383590:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTAAAAAATCAAATCA+TGG | - | chr3_1:86504383-86504402 | Msa0383590:intron | 10.0% |
| !!! | AATGTAAAATATGTTTTTTA+TGG | - | chr3_1:86505448-86505467 | Msa0383590:CDS | 10.0% |
| !!! | ATGTAAAATATGTTTTTTAT+GGG | - | chr3_1:86505449-86505468 | Msa0383590:CDS | 10.0% |
| !!! | TTTTCATATAAGTTAAAATA+AGG | - | chr3_1:86505898-86505917 | Msa0383590:intron | 10.0% |
| !! | TTTAGATAGTATATAATCAA+AGG | - | chr3_1:86503724-86503743 | Msa0383590:intron | 15.0% |
| !! | TTAGATAGTATATAATCAAA+GGG | - | chr3_1:86503725-86503744 | Msa0383590:intron | 15.0% |
| !!! | AATGTGTATGTATTTTATAT+CGG | + | chr3_1:86505411-86505430 | None:intergenic | 15.0% |
| !!! | TTTTACATTGCATTTTTTTT+CGG | + | chr3_1:86505437-86505456 | None:intergenic | 15.0% |
| !!! | TATTTAGTTTATTCATGTTT+AGG | - | chr3_1:86505576-86505595 | Msa0383590:intron | 15.0% |
| !!! | ATTTAGTTTATTCATGTTTA+GGG | - | chr3_1:86505577-86505596 | Msa0383590:intron | 15.0% |
| !! | TTCAAATAAGTTAATTCAAA+AGG | - | chr3_1:86506004-86506023 | Msa0383590:intron | 15.0% |
| !! | TTGGTTATTATTAGAATAAA+AGG | - | chr3_1:86506040-86506059 | Msa0383590:intron | 15.0% |
| !! | TGGTTATTATTAGAATAAAA+GGG | - | chr3_1:86506041-86506060 | Msa0383590:intron | 15.0% |
| !! | TCCATTATTATTGTATGAAA+TGG | + | chr3_1:86503158-86503177 | None:intergenic | 20.0% |
| !!! | ACAGTATTTTTCATAGTTTT+GGG | + | chr3_1:86503393-86503412 | None:intergenic | 20.0% |
| !! | TTATACATATATACCTTAGA+TGG | + | chr3_1:86503477-86503496 | None:intergenic | 20.0% |
| !!! | TTGGATTTTTATTTTTTAGC+CGG | - | chr3_1:86503923-86503942 | Msa0383590:CDS | 20.0% |
| !!! | TTCATTGTTATAGTGTTTTT+AGG | - | chr3_1:86503966-86503985 | Msa0383590:CDS | 20.0% |
| !! | CTTAATATATGTATTGCTAA+TGG | - | chr3_1:86504239-86504258 | Msa0383590:intron | 20.0% |
| !! | AAATCAACAAATTCTATCTT+TGG | - | chr3_1:86504311-86504330 | Msa0383590:intron | 20.0% |
| !! | ATTCTAACGAAAAATGAATT+AGG | + | chr3_1:86504556-86504575 | None:intergenic | 20.0% |
| !! | CTTGAAAACTTTAAACAATT+GGG | - | chr3_1:86504807-86504826 | Msa0383590:intron | 20.0% |
| !!! | ATATTACAAAACTAGTTTGT+AGG | - | chr3_1:86505287-86505306 | Msa0383590:intron | 20.0% |
| !!! | TATTACAAAACTAGTTTGTA+GGG | - | chr3_1:86505288-86505307 | Msa0383590:intron | 20.0% |
| !!! | ATGTGTATGTATTTTATATC+GGG | + | chr3_1:86505410-86505429 | None:intergenic | 20.0% |
| !! | ACATGAATAAACTAAATAGA+AGG | + | chr3_1:86505574-86505593 | None:intergenic | 20.0% |
| !! | GTAGATTAATAAAGTATGAT+AGG | - | chr3_1:86505640-86505659 | Msa0383590:CDS | 20.0% |
| !! | AATCATTTATATAGTACTTC+AGG | + | chr3_1:86505798-86505817 | None:intergenic | 20.0% |
| !!! | GAAGTACTATATAAATGATT+CGG | - | chr3_1:86505798-86505817 | Msa0383590:CDS | 20.0% |
| !! | TAATTATATGCAAGATTGTT+TGG | + | chr3_1:86505970-86505989 | None:intergenic | 20.0% |
| !!! | ATTTATATAGAAAGTACGAA+AGG | + | chr3_1:86506426-86506445 | None:intergenic | 20.0% |
| !! | AATTATATGAAATTACCACT+AGG | + | chr3_1:86506586-86506605 | None:intergenic | 20.0% |
| ! | GCCATTTCATACAATAATAA+TGG | - | chr3_1:86503154-86503173 | Msa0383590:CDS | 25.0% |
| !!! | TGTTTTAACACATTTTTCAC+TGG | - | chr3_1:86503285-86503304 | Msa0383590:intron | 25.0% |
| !! | CACAGTATTTTTCATAGTTT+TGG | + | chr3_1:86503394-86503413 | None:intergenic | 25.0% |
| ! | CAAAACTATGAAAAATACTG+TGG | - | chr3_1:86503392-86503411 | Msa0383590:CDS | 25.0% |
| !! | TAAATTGATTGACGTTTTTG+TGG | - | chr3_1:86503416-86503435 | Msa0383590:CDS | 25.0% |
| ! | AACACTATAACAATGAATAC+AGG | + | chr3_1:86503963-86503982 | None:intergenic | 25.0% |
| ! | TCAAACTCGTTATATTTGTA+TGG | + | chr3_1:86504173-86504192 | None:intergenic | 25.0% |
| !!! | AATATAACGAGTTTGAGTTT+TGG | - | chr3_1:86504177-86504196 | Msa0383590:intron | 25.0% |
| ! | CAATACATATATTAAGTCTC+AGG | + | chr3_1:86504235-86504254 | None:intergenic | 25.0% |
| ! | TACATTGATATATAATGTGC+AGG | - | chr3_1:86504263-86504282 | Msa0383590:intron | 25.0% |
| ! | AAAAATCAAATCATGGAAGT+TGG | - | chr3_1:86504390-86504409 | Msa0383590:CDS | 25.0% |
| ! | GAAAAAATATCAATCTCTTG+TGG | + | chr3_1:86504787-86504806 | None:intergenic | 25.0% |
| !!! | CCAATTGTTTAAAGTTTTCA+AGG | + | chr3_1:86504809-86504828 | None:intergenic | 25.0% |
| ! | CCTTGAAAACTTTAAACAAT+TGG | - | chr3_1:86504806-86504825 | Msa0383590:intron | 25.0% |
| ! | CTTTGCAAAGCAAATATAAT+AGG | + | chr3_1:86504890-86504909 | None:intergenic | 25.0% |
| !!! | TTATTTTTTTTTTCAGCCGA+TGG | - | chr3_1:86505130-86505149 | Msa0383590:CDS | 25.0% |
| !!! | AAGTTGATATCAAACTAAAC+AGG | - | chr3_1:86505170-86505189 | Msa0383590:CDS | 25.0% |
| !!! | TTTATGGGAAATTTTTTTGC+AGG | - | chr3_1:86505464-86505483 | Msa0383590:intron | 25.0% |
| ! | AAAAGGCTCAAATCATATAT+TGG | - | chr3_1:86506021-86506040 | Msa0383590:intron | 25.0% |
| ! | ATAGGAAAATCCATATAAAC+TGG | + | chr3_1:86506261-86506280 | None:intergenic | 25.0% |
| !! | ACAAAGTTTTCATTGATCAT+AGG | + | chr3_1:86506279-86506298 | None:intergenic | 25.0% |
| ! | ATGATCAATGAAAACTTTGT+TGG | - | chr3_1:86506279-86506298 | Msa0383590:intron | 25.0% |
| ! | AATTACATGTTACAATTCTC+TGG | + | chr3_1:86506401-86506420 | None:intergenic | 25.0% |
| ! | TTATCTATGTCAAAGGTAAA+AGG | - | chr3_1:86506536-86506555 | Msa0383590:CDS | 25.0% |
| !! | CATTGATAATAATGCTACTA+AGG | + | chr3_1:86506609-86506628 | None:intergenic | 25.0% |
| ! | ATGTATTCTTCTCAAACATA+TGG | + | chr3_1:86506689-86506708 | None:intergenic | 25.0% |
| !! | AGAAGAATACATTTTGCAAT+GGG | - | chr3_1:86506697-86506716 | Msa0383590:CDS | 25.0% |
| !!! | ACATTTATCGATTTTCTTTC+AGG | - | chr3_1:86506875-86506894 | Msa0383590:intron | 25.0% |
| !! | ATCGATACAAAGAATTTTTC+TGG | - | chr3_1:86506906-86506925 | Msa0383590:intron | 25.0% |
| !!! | AAAGAATTTTTCTGGTGATA+CGG | - | chr3_1:86506914-86506933 | Msa0383590:intron | 25.0% |
| !!! | TCCACTCTTCTCTATTTTTA+AGG | - | chr3_1:86503228-86503247 | Msa0383590:CDS | 30.0% |
| ACCTTAAAAATAGAGAAGAG+TGG | + | chr3_1:86503232-86503251 | None:intergenic | 30.0% | |
| ! | TTTGGGAACATCAATTTTCA+AGG | + | chr3_1:86503376-86503395 | None:intergenic | 30.0% |
| ! | AATTCCTAATGATTTTCCAG+AGG | - | chr3_1:86503622-86503641 | Msa0383590:CDS | 30.0% |
| ! | ATTCCTAATGATTTTCCAGA+GGG | - | chr3_1:86503623-86503642 | Msa0383590:CDS | 30.0% |
| ! | TAGCTTGATGATCAATTCAA+GGG | - | chr3_1:86503777-86503796 | Msa0383590:intron | 30.0% |
| !! | TTCAACCATTGATTTGAGAT+CGG | - | chr3_1:86503994-86504013 | Msa0383590:CDS | 30.0% |
| TATATTAAGTCTCAGGCTTA+TGG | + | chr3_1:86504228-86504247 | None:intergenic | 30.0% | |
| TTGGTAGATCAAGTCATATT+TGG | - | chr3_1:86504330-86504349 | Msa0383590:intron | 30.0% | |
| TGGTAGATCAAGTCATATTT+GGG | - | chr3_1:86504331-86504350 | Msa0383590:intron | 30.0% | |
| !!! | TTGCTGTTTCGTAATTTTAG+AGG | + | chr3_1:86504592-86504611 | None:intergenic | 30.0% |
| TCCCTTAAATTGAATGATGT+CGG | - | chr3_1:86504617-86504636 | Msa0383590:intron | 30.0% | |
| ACCGACATCATTCAATTTAA+GGG | + | chr3_1:86504621-86504640 | None:intergenic | 30.0% | |
| GTTCATAATACCGTCTTTAA+GGG | + | chr3_1:86504644-86504663 | None:intergenic | 30.0% | |
| AGTTCATAATACCGTCTTTA+AGG | + | chr3_1:86504645-86504664 | None:intergenic | 30.0% | |
| ACTCATTTGGTTAAATCTTG+TGG | - | chr3_1:86504662-86504681 | Msa0383590:CDS | 30.0% | |
| TAAACCAAAAAACCTTTGGA+TGG | + | chr3_1:86504867-86504886 | None:intergenic | 30.0% | |
| TAGGTAAACCAAAAAACCTT+TGG | + | chr3_1:86504871-86504890 | None:intergenic | 30.0% | |
| ATGAACCAATTTCTTTCCAT+CGG | + | chr3_1:86505149-86505168 | None:intergenic | 30.0% | |
| TAGAAGTCTGTTTAGATCAA+TGG | + | chr3_1:86505518-86505537 | None:intergenic | 30.0% | |
| ATGATAGGAAAGAATATGCA+AGG | - | chr3_1:86505655-86505674 | Msa0383590:CDS | 30.0% | |
| TAACTCAATCAAATGGTTTG+AGG | - | chr3_1:86505707-86505726 | Msa0383590:CDS | 30.0% | |
| ACAATGTGAAATGTGCAATT+AGG | + | chr3_1:86505738-86505757 | None:intergenic | 30.0% | |
| ! | TCACATTGTCAATTCTTTTG+AGG | - | chr3_1:86505749-86505768 | Msa0383590:CDS | 30.0% |
| !! | ATTGTCAATTCTTTTGAGGA+TGG | - | chr3_1:86505753-86505772 | Msa0383590:CDS | 30.0% |
| ! | CACTCAAATTCTTTTGAACT+CGG | + | chr3_1:86506162-86506181 | None:intergenic | 30.0% |
| TCATTGTTAATTACCTTGAG+TGG | + | chr3_1:86506358-86506377 | None:intergenic | 30.0% | |
| TTAGATGTGCCAAAATATAG+AGG | - | chr3_1:86506476-86506495 | Msa0383590:intron | 30.0% | |
| ! | TTAGCTAGACCTCTATATTT+TGG | + | chr3_1:86506488-86506507 | None:intergenic | 30.0% |
| TGCAGAATTATCTATGTCAA+AGG | - | chr3_1:86506529-86506548 | Msa0383590:CDS | 30.0% | |
| ! | TTAACATTTCCTTTTCCTAG+TGG | - | chr3_1:86506568-86506587 | Msa0383590:CDS | 30.0% |
| ATGAAATTACCACTAGGAAA+AGG | + | chr3_1:86506580-86506599 | None:intergenic | 30.0% | |
| ATATGGTATTCCATCCTTAT+AGG | + | chr3_1:86506672-86506691 | None:intergenic | 30.0% | |
| ! | GAGAAGAATACATTTTGCAA+TGG | - | chr3_1:86506696-86506715 | Msa0383590:CDS | 30.0% |
| ! | GAAGAATACATTTTGCAATG+GGG | - | chr3_1:86506698-86506717 | Msa0383590:CDS | 30.0% |
| ! | TCTGCAAGACATTTCAATTT+TGG | + | chr3_1:86506943-86506962 | None:intergenic | 30.0% |
| TAATAATCCTGGAATGAGAT+TGG | + | chr3_1:86506996-86507015 | None:intergenic | 30.0% | |
| GTAAATCGTTGCATTCAGAA+AGG | - | chr3_1:86503184-86503203 | Msa0383590:CDS | 35.0% | |
| !! | TCAATTTTCAAGGAGACTTC+AGG | + | chr3_1:86503366-86503385 | None:intergenic | 35.0% |
| TATACCTTAGATGGAAGCAA+TGG | + | chr3_1:86503468-86503487 | None:intergenic | 35.0% | |
| AATCATTAGGAATTCGTCCA+TGG | + | chr3_1:86503616-86503635 | None:intergenic | 35.0% | |
| ! | CTAGCTTGATGATCAATTCA+AGG | - | chr3_1:86503776-86503795 | Msa0383590:intron | 35.0% |
| TAGATCAAGTCATATTTGGG+TGG | - | chr3_1:86504334-86504353 | Msa0383590:intron | 35.0% | |
| TAACAACAAGCACGTTGAAA+CGG | - | chr3_1:86504424-86504443 | Msa0383590:CDS | 35.0% | |
| GAAGAGATAAGCAGACAAAA+TGG | + | chr3_1:86504519-86504538 | None:intergenic | 35.0% | |
| GACCGACATCATTCAATTTA+AGG | + | chr3_1:86504622-86504641 | None:intergenic | 35.0% | |
| GACGGTATTATGAACTCATT+TGG | - | chr3_1:86504649-86504668 | Msa0383590:CDS | 35.0% | |
| ACCAGAAATAATTCCAACCA+CGG | + | chr3_1:86505041-86505060 | None:intergenic | 35.0% | |
| TTTGTGTAACACCTATGTCA+TGG | + | chr3_1:86505207-86505226 | None:intergenic | 35.0% | |
| ! | ATGACATAGGTGTTACACAA+AGG | - | chr3_1:86505206-86505225 | Msa0383590:intron | 35.0% |
| ! | ACGCAAGTCACTTTATATGT+AGG | - | chr3_1:86505364-86505383 | Msa0383590:CDS | 35.0% |
| CTGTTTAGATCAATGGTTAG+TGG | + | chr3_1:86505511-86505530 | None:intergenic | 35.0% | |
| GATCTAAACAGACTTCTAAG+AGG | - | chr3_1:86505520-86505539 | Msa0383590:intron | 35.0% | |
| TTCAGTTCATATGTACTCAC+TGG | + | chr3_1:86505549-86505568 | None:intergenic | 35.0% | |
| AGGAAAGAATATGCAAGGAT+TGG | - | chr3_1:86505660-86505679 | Msa0383590:CDS | 35.0% | |
| GGAAAGAATATGCAAGGATT+GGG | - | chr3_1:86505661-86505680 | Msa0383590:CDS | 35.0% | |
| GAAAGAATATGCAAGGATTG+GGG | - | chr3_1:86505662-86505681 | Msa0383590:CDS | 35.0% | |
| GCAATGCTAACTCAATCAAA+TGG | - | chr3_1:86505700-86505719 | Msa0383590:CDS | 35.0% | |
| !! | ATAAATGATTCGGTGCTGTT+TGG | - | chr3_1:86505808-86505827 | Msa0383590:CDS | 35.0% |
| AGATTGTTTGGAAGAGCTTA+TGG | + | chr3_1:86505958-86505977 | None:intergenic | 35.0% | |
| ! | AGGGCTGCATTAAATTTTGA+AGG | - | chr3_1:86506060-86506079 | Msa0383590:intron | 35.0% |
| ! | AATTCTTTTGAACTCGGATC+AGG | + | chr3_1:86506156-86506175 | None:intergenic | 35.0% |
| CGAGTTCAAAAGAATTTGAG+TGG | - | chr3_1:86506160-86506179 | Msa0383590:intron | 35.0% | |
| ATTGAATATGCAAACTGGAG+AGG | - | chr3_1:86506206-86506225 | Msa0383590:intron | 35.0% | |
| GTTAAGGAGAAAGATCTTTG+TGG | - | chr3_1:86506228-86506247 | Msa0383590:intron | 35.0% | |
| TGGTGACAAACCAGTTTATA+TGG | - | chr3_1:86506248-86506267 | Msa0383590:intron | 35.0% | |
| GAGAAAAAGACGAACCTATA+AGG | - | chr3_1:86506655-86506674 | Msa0383590:intron | 35.0% | |
| AAAAGACGAACCTATAAGGA+TGG | - | chr3_1:86506659-86506678 | Msa0383590:intron | 35.0% | |
| GATACTAACACATCTCAAGT+AGG | - | chr3_1:86506792-86506811 | Msa0383590:CDS | 35.0% | |
| TACTCTACAGCACATTGAAC+AGG | + | chr3_1:86503544-86503563 | None:intergenic | 40.0% | |
| ATGGATGCAAGTCACAAGTA+TGG | + | chr3_1:86503597-86503616 | None:intergenic | 40.0% | |
| ! | ATACTTGTGACTTGCATCCA+TGG | - | chr3_1:86503596-86503615 | Msa0383590:intron | 40.0% |
| ! | ACACCCTCTGGAAAATCATT+AGG | + | chr3_1:86503629-86503648 | None:intergenic | 40.0% |
| TTTCTAATGTAGACACCCTC+TGG | + | chr3_1:86503641-86503660 | None:intergenic | 40.0% | |
| !! | GAGGGTGTCTACATTAGAAA+TGG | - | chr3_1:86503641-86503660 | Msa0383590:CDS | 40.0% |
| CAACACAAACGCATGATACT+TGG | - | chr3_1:86503904-86503923 | Msa0383590:CDS | 40.0% | |
| ! | TTTTAGCCGGTCAACTTAGA+TGG | - | chr3_1:86503936-86503955 | Msa0383590:CDS | 40.0% |
| ACTGTCCGATCTCAAATCAA+TGG | + | chr3_1:86504002-86504021 | None:intergenic | 40.0% | |
| CCAATCGAAATAAACGATCG+AGG | + | chr3_1:86504060-86504079 | None:intergenic | 40.0% | |
| CCTCGATCGTTTATTTCGAT+TGG | - | chr3_1:86504057-86504076 | Msa0383590:intron | 40.0% | |
| ! | AGTCCTCCAAAAAGTGGATT+TGG | + | chr3_1:86504290-86504309 | None:intergenic | 40.0% |
| GATTTCAGTCCTCCAAAAAG+TGG | + | chr3_1:86504296-86504315 | None:intergenic | 40.0% | |
| TCAAGTCATATTTGGGTGGA+AGG | - | chr3_1:86504338-86504357 | Msa0383590:intron | 40.0% | |
| !! | CAACGTGCTTGTTGTTATAG+AGG | + | chr3_1:86504421-86504440 | None:intergenic | 40.0% |
| TGTCTGCTTATCTCTTCAAC+TGG | - | chr3_1:86504522-86504541 | Msa0383590:intron | 40.0% | |
| GTCTGCTTATCTCTTCAACT+GGG | - | chr3_1:86504523-86504542 | Msa0383590:intron | 40.0% | |
| TGGACTTAACAGTTGAGATC+TGG | - | chr3_1:86504682-86504701 | Msa0383590:intron | 40.0% | |
| ACCAATGTGTTTGAGCATTC+AGG | - | chr3_1:86504730-86504749 | Msa0383590:intron | 40.0% | |
| TCCTGAATGCTCAAACACAT+TGG | + | chr3_1:86504734-86504753 | None:intergenic | 40.0% | |
| ! | ACCTTTTACTAGCCATCCAA+AGG | - | chr3_1:86504852-86504871 | Msa0383590:intron | 40.0% |
| ACCTTTGGATGGCTAGTAAA+AGG | + | chr3_1:86504856-86504875 | None:intergenic | 40.0% | |
| !!! | CTAGCCATCCAAAGGTTTTT+TGG | - | chr3_1:86504860-86504879 | Msa0383590:intron | 40.0% |
| TCACAGAAAGCTCCAATTAC+AGG | - | chr3_1:86504974-86504993 | Msa0383590:CDS | 40.0% | |
| CACAGAAAGCTCCAATTACA+GGG | - | chr3_1:86504975-86504994 | Msa0383590:CDS | 40.0% | |
| ACAGAAAGCTCCAATTACAG+GGG | - | chr3_1:86504976-86504995 | Msa0383590:CDS | 40.0% | |
| ATAATTCCAACCACGGCAAA+AGG | + | chr3_1:86505034-86505053 | None:intergenic | 40.0% | |
| TTCAGCCGATGGAAAGAAAT+TGG | - | chr3_1:86505141-86505160 | Msa0383590:CDS | 40.0% | |
| TGTAGTCTTTGCCATGACAT+AGG | - | chr3_1:86505193-86505212 | Msa0383590:intron | 40.0% | |
| TTGCAGGTACAATGTGATCA+TGG | - | chr3_1:86505480-86505499 | Msa0383590:intron | 40.0% | |
| ! | CTAAACAGACTTCTAAGAGG+AGG | - | chr3_1:86505523-86505542 | Msa0383590:intron | 40.0% |
| CTCAATCAAATGGTTTGAGG+TGG | - | chr3_1:86505710-86505729 | Msa0383590:CDS | 40.0% | |
| !! | TTCTTTTGAGGATGGAGATG+AGG | - | chr3_1:86505761-86505780 | Msa0383590:CDS | 40.0% |
| ! | TGAAGGCATGTCTAATTGTG+TGG | - | chr3_1:86506077-86506096 | Msa0383590:intron | 40.0% |
| GTCTAATTGTGTGGATCAAC+AGG | - | chr3_1:86506086-86506105 | Msa0383590:intron | 40.0% | |
| GGTTATCTCGTTGTCATGAA+TGG | - | chr3_1:86506181-86506200 | Msa0383590:intron | 40.0% | |
| TGGCGATTGAATATGCAAAC+TGG | - | chr3_1:86506201-86506220 | Msa0383590:intron | 40.0% | |
| TATGCAAACTGGAGAGGTTA+AGG | - | chr3_1:86506212-86506231 | Msa0383590:intron | 40.0% | |
| ATGTCTTGCAGAGTTCCATA+TGG | - | chr3_1:86506951-86506970 | Msa0383590:CDS | 40.0% | |
| TGTCTTGCAGAGTTCCATAT+GGG | - | chr3_1:86506952-86506971 | Msa0383590:CDS | 40.0% | |
| AGAGTTCCATATGGGTTTCA+TGG | - | chr3_1:86506960-86506979 | Msa0383590:CDS | 40.0% | |
| CAAGCCATTGCTTCCATCTA+AGG | - | chr3_1:86503461-86503480 | Msa0383590:CDS | 45.0% | |
| GTAGAGTAACTTTGCTCCTG+TGG | - | chr3_1:86503556-86503575 | Msa0383590:intron | 45.0% | |
| TGCGATAAACTCCATTCCCT+AGG | - | chr3_1:86503808-86503827 | Msa0383590:CDS | 45.0% | |
| ! | ACAGGTCCATCTAAGTTGAC+CGG | + | chr3_1:86503945-86503964 | None:intergenic | 45.0% |
| !! | GCAGGACCAAATCCACTTTT+TGG | - | chr3_1:86504281-86504300 | Msa0383590:intron | 45.0% |
| !!! | GGACCAAATCCACTTTTTGG+AGG | - | chr3_1:86504284-86504303 | Msa0383590:intron | 45.0% |
| CATATTTGGGTGGAAGGAGA+AGG | - | chr3_1:86504344-86504363 | Msa0383590:intron | 45.0% | |
| TCTATGGCAGGCAGAAACAA+TGG | + | chr3_1:86504482-86504501 | None:intergenic | 45.0% | |
| !! | TTGTTTCTGCCTGCCATAGA+AGG | - | chr3_1:86504482-86504501 | Msa0383590:CDS | 45.0% |
| AGTGAATTGCCTTCTATGGC+AGG | + | chr3_1:86504494-86504513 | None:intergenic | 45.0% | |
| TGATGTCGGTCCCTTAAAGA+CGG | - | chr3_1:86504631-86504650 | Msa0383590:CDS | 45.0% | |
| GTAACTAGCTCCCCTGTAAT+TGG | + | chr3_1:86504989-86505008 | None:intergenic | 45.0% | |
| ACAGGGGAGCTAGTTACATT+AGG | - | chr3_1:86504992-86505011 | Msa0383590:CDS | 45.0% | |
| GGAGCTAGTTACATTAGGTG+TGG | - | chr3_1:86504997-86505016 | Msa0383590:CDS | 45.0% | |
| ! | ACCAGTTAAACCTTTTGCCG+TGG | - | chr3_1:86505021-86505040 | Msa0383590:intron | 45.0% |
| ACCACGGCAAAAGGTTTAAC+TGG | + | chr3_1:86505025-86505044 | None:intergenic | 45.0% | |
| ! | GTTAAACCTTTTGCCGTGGT+TGG | - | chr3_1:86505025-86505044 | Msa0383590:intron | 45.0% |
| GCCGTGGTTGGAATTATTTC+TGG | - | chr3_1:86505037-86505056 | Msa0383590:intron | 45.0% | |
| ! | AACTAGTTTGTAGGGCGAGA+AGG | - | chr3_1:86505296-86505315 | Msa0383590:intron | 45.0% |
| TGGATCAACAGGTTGTAGTG+AGG | - | chr3_1:86506097-86506116 | Msa0383590:intron | 45.0% | |
| GGATCAACAGGTTGTAGTGA+GGG | - | chr3_1:86506098-86506117 | Msa0383590:intron | 45.0% | |
| GATCAACAGGTTGTAGTGAG+GGG | - | chr3_1:86506099-86506118 | Msa0383590:intron | 45.0% | |
| CGGATCAGGTTCAGGAATTA+AGG | + | chr3_1:86506142-86506161 | None:intergenic | 45.0% | |
| TTTGAACTCGGATCAGGTTC+AGG | + | chr3_1:86506150-86506169 | None:intergenic | 45.0% | |
| TGAGTGGTAGAGCTTGCAAT+AGG | + | chr3_1:86506342-86506361 | None:intergenic | 45.0% | |
| ATTGCAAGCTCTACCACTCA+AGG | - | chr3_1:86506342-86506361 | Msa0383590:intron | 45.0% | |
| ACCTTCATCTCTAGGCACAA+AGG | + | chr3_1:86506727-86506746 | None:intergenic | 45.0% | |
| TCTTCGACACCTTCATCTCT+AGG | + | chr3_1:86506735-86506754 | None:intergenic | 45.0% | |
| !! | GAAGGTGTCGAAGAAGATGA+TGG | - | chr3_1:86506741-86506760 | Msa0383590:CDS | 45.0% |
| ! | GTGTCGAAGAAGATGATGGT+TGG | - | chr3_1:86506745-86506764 | Msa0383590:CDS | 45.0% |
| AAGGCTCCATGAAACCCATA+TGG | + | chr3_1:86506969-86506988 | None:intergenic | 45.0% | |
| CTGGAATGAGATTGGCATGA+AGG | + | chr3_1:86506988-86507007 | None:intergenic | 45.0% | |
| CTTCATGCCAATCTCATTCC+AGG | - | chr3_1:86506986-86507005 | Msa0383590:CDS | 45.0% | |
| !! | CTATATAAATATTTATAATA+TGG | - | chr3_1:86506436-86506455 | Msa0383590:intron | 5.0% |
| AAGGAGACTTCAGGTAGAGC+TGG | + | chr3_1:86503357-86503376 | None:intergenic | 50.0% | |
| CTTTGCTCCTGTGGAAGAGT+TGG | - | chr3_1:86503565-86503584 | Msa0383590:intron | 50.0% | |
| TTCTCTCGTGTCCTAGGGAA+TGG | + | chr3_1:86503822-86503841 | None:intergenic | 50.0% | |
| ATTCCCTAGGACACGAGAGA+AGG | - | chr3_1:86503821-86503840 | Msa0383590:CDS | 50.0% | |
| GTTCCTTCTCTCGTGTCCTA+GGG | + | chr3_1:86503827-86503846 | None:intergenic | 50.0% | |
| AGTTCCTTCTCTCGTGTCCT+AGG | + | chr3_1:86503828-86503847 | None:intergenic | 50.0% | |
| GGCGAGTGAATTGCCTTCTA+TGG | + | chr3_1:86504498-86504517 | None:intergenic | 50.0% | |
| ATTGGGAACTCAGTGCAGCT+TGG | - | chr3_1:86504824-86504843 | Msa0383590:intron | 50.0% | |
| ATTGGGGTAATGCCACGCTA+TGG | - | chr3_1:86505678-86505697 | Msa0383590:CDS | 50.0% | |
| GAGTTAGCATTGCCATAGCG+TGG | + | chr3_1:86505693-86505712 | None:intergenic | 50.0% | |
| GCCTTTGTGCCTAGAGATGA+AGG | - | chr3_1:86506723-86506742 | Msa0383590:CDS | 50.0% | |
| TGCTCCTGTGGAAGAGTTGG+AGG | - | chr3_1:86503568-86503587 | Msa0383590:intron | 55.0% | |
| GCTTCCTCCAACTCTTCCAC+AGG | + | chr3_1:86503575-86503594 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 86503151 | 86507019 | 86503151 | ID=Msa0383590;Name=Msa0383590 |
| chr3_1 | mRNA | 86503151 | 86507019 | 86503151 | ID=Msa0383590-mRNA-1;Parent=Msa0383590;Name=Msa0383590-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.08|0|1|1|1|13|0|583 |
| chr3_1 | exon | 86506921 | 86507019 | 86506921 | ID=Msa0383590-mRNA-1:exon:22937;Parent=Msa0383590-mRNA-1 |
| chr3_1 | exon | 86506688 | 86506828 | 86506688 | ID=Msa0383590-mRNA-1:exon:22936;Parent=Msa0383590-mRNA-1 |
| chr3_1 | exon | 86506508 | 86506610 | 86506508 | ID=Msa0383590-mRNA-1:exon:22935;Parent=Msa0383590-mRNA-1 |
| chr3_1 | exon | 86505626 | 86505885 | 86505626 | ID=Msa0383590-mRNA-1:exon:22934;Parent=Msa0383590-mRNA-1 |
| chr3_1 | exon | 86505297 | 86505476 | 86505297 | ID=Msa0383590-mRNA-1:exon:22933;Parent=Msa0383590-mRNA-1 |
| chr3_1 | exon | 86505112 | 86505190 | 86505112 | ID=Msa0383590-mRNA-1:exon:22932;Parent=Msa0383590-mRNA-1 |
| chr3_1 | exon | 86504943 | 86505024 | 86504943 | ID=Msa0383590-mRNA-1:exon:22931;Parent=Msa0383590-mRNA-1 |
| chr3_1 | exon | 86504622 | 86504684 | 86504622 | ID=Msa0383590-mRNA-1:exon:22930;Parent=Msa0383590-mRNA-1 |
| chr3_1 | exon | 86504388 | 86504526 | 86504388 | ID=Msa0383590-mRNA-1:exon:22929;Parent=Msa0383590-mRNA-1 |
| chr3_1 | exon | 86503807 | 86504062 | 86503807 | ID=Msa0383590-mRNA-1:exon:22928;Parent=Msa0383590-mRNA-1 |
| chr3_1 | exon | 86503620 | 86503690 | 86503620 | ID=Msa0383590-mRNA-1:exon:22927;Parent=Msa0383590-mRNA-1 |
| chr3_1 | exon | 86503361 | 86503516 | 86503361 | ID=Msa0383590-mRNA-1:exon:22926;Parent=Msa0383590-mRNA-1 |
| chr3_1 | exon | 86503151 | 86503273 | 86503151 | ID=Msa0383590-mRNA-1:exon:22925;Parent=Msa0383590-mRNA-1 |
| chr3_1 | CDS | 86506921 | 86507019 | 86506921 | ID=Msa0383590-mRNA-1:cds;Parent=Msa0383590-mRNA-1 |
| chr3_1 | CDS | 86506688 | 86506828 | 86506688 | ID=Msa0383590-mRNA-1:cds;Parent=Msa0383590-mRNA-1 |
| chr3_1 | CDS | 86506508 | 86506610 | 86506508 | ID=Msa0383590-mRNA-1:cds;Parent=Msa0383590-mRNA-1 |
| chr3_1 | CDS | 86505626 | 86505885 | 86505626 | ID=Msa0383590-mRNA-1:cds;Parent=Msa0383590-mRNA-1 |
| chr3_1 | CDS | 86505297 | 86505476 | 86505297 | ID=Msa0383590-mRNA-1:cds;Parent=Msa0383590-mRNA-1 |
| chr3_1 | CDS | 86505112 | 86505190 | 86505112 | ID=Msa0383590-mRNA-1:cds;Parent=Msa0383590-mRNA-1 |
| chr3_1 | CDS | 86504943 | 86505024 | 86504943 | ID=Msa0383590-mRNA-1:cds;Parent=Msa0383590-mRNA-1 |
| chr3_1 | CDS | 86504622 | 86504684 | 86504622 | ID=Msa0383590-mRNA-1:cds;Parent=Msa0383590-mRNA-1 |
| chr3_1 | CDS | 86504388 | 86504526 | 86504388 | ID=Msa0383590-mRNA-1:cds;Parent=Msa0383590-mRNA-1 |
| chr3_1 | CDS | 86503807 | 86504062 | 86503807 | ID=Msa0383590-mRNA-1:cds;Parent=Msa0383590-mRNA-1 |
| chr3_1 | CDS | 86503620 | 86503690 | 86503620 | ID=Msa0383590-mRNA-1:cds;Parent=Msa0383590-mRNA-1 |
| chr3_1 | CDS | 86503361 | 86503516 | 86503361 | ID=Msa0383590-mRNA-1:cds;Parent=Msa0383590-mRNA-1 |
| chr3_1 | CDS | 86503151 | 86503273 | 86503151 | ID=Msa0383590-mRNA-1:cds;Parent=Msa0383590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
