Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526630 | XP_003601544.1 | 93.902 | 328 | 19 | 1 | 1 | 328 | 1 | 327 | 0.0 | 625 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526630 | G7J8W4 | 93.902 | 328 | 19 | 1 | 1 | 328 | 1 | 327 | 0.0 | 625 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0229840 | Msa0526630 | 0.842837 | 2.025537e-58 | -8.615850e-47 |
| Msa0526630 | Msa1101540 | 0.921043 | 5.927423e-88 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526630 | MtrunA17_Chr3g0120881 | 93.902 | 328 | 19 | 1 | 1 | 328 | 1 | 327 | 0.0 | 625 |
| Msa0526630 | MtrunA17_Chr5g0416081 | 32.618 | 233 | 151 | 4 | 1 | 229 | 3 | 233 | 5.13e-32 | 121 |
| Msa0526630 | MtrunA17_Chr7g0222351 | 25.874 | 286 | 177 | 12 | 5 | 266 | 1 | 275 | 4.18e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526630 | AT1G04960.1 | 42.169 | 332 | 171 | 8 | 1 | 327 | 1 | 316 | 5.47e-80 | 246 |
| Msa0526630 | AT1G04960.2 | 41.083 | 314 | 164 | 8 | 19 | 327 | 36 | 333 | 7.51e-72 | 226 |
| Msa0526630 | AT1G27000.1 | 35.217 | 230 | 146 | 3 | 1 | 229 | 1 | 228 | 6.13e-37 | 134 |
| Msa0526630 | AT2G02730.3 | 32.035 | 231 | 143 | 5 | 1 | 226 | 1 | 222 | 8.66e-33 | 123 |
| Msa0526630 | AT2G02730.1 | 32.035 | 231 | 143 | 5 | 1 | 226 | 1 | 222 | 8.66e-33 | 123 |
| Msa0526630 | AT2G02730.2 | 32.035 | 231 | 143 | 5 | 1 | 226 | 1 | 222 | 8.66e-33 | 123 |
| Msa0526630 | AT1G24265.2 | 30.531 | 226 | 148 | 3 | 5 | 225 | 1 | 222 | 1.21e-23 | 100 |
| Msa0526630 | AT1G24265.1 | 30.531 | 226 | 148 | 3 | 5 | 225 | 1 | 222 | 1.21e-23 | 100 |
| Msa0526630 | AT1G24267.1 | 31.416 | 226 | 146 | 4 | 5 | 225 | 1 | 222 | 8.92e-22 | 94.7 |
| Msa0526630 | AT1G24267.2 | 31.718 | 227 | 145 | 5 | 5 | 225 | 1 | 223 | 1.85e-20 | 90.9 |
| Msa0526630 | AT1G24265.3 | 29.208 | 202 | 134 | 3 | 29 | 225 | 60 | 257 | 8.93e-19 | 86.7 |
Find 106 sgRNAs with CRISPR-Local
Find 471 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCAAATTTCTTTGTTATTA+TGG | 0.049863 | 3_4:+80525180 | None:intergenic |
| TAAAATACTTAAATTAAATT+TGG | 0.190476 | 3_4:+80524775 | None:intergenic |
| GGTGAGCTCTCAATGGTTTC+TGG | 0.202687 | 3_4:+80525202 | None:intergenic |
| CCAAATTTCTTTGTTATTAT+GGG | 0.232916 | 3_4:+80525181 | None:intergenic |
| GAGCAGGGGCATTACTGATT+TGG | 0.334527 | 3_4:-80525083 | Msa0526630:CDS |
| ACCTTAGGGGCTTTCTCCTC+AGG | 0.342947 | 3_4:+80525335 | None:intergenic |
| CCCATAATAACAAAGAAATT+TGG | 0.348898 | 3_4:-80525181 | Msa0526630:CDS |
| AGGCATTCCTTTCTCAGATT+GGG | 0.358700 | 3_4:-80526980 | Msa0526630:CDS |
| GCTAGTTCTGTTGTTATGAA+TGG | 0.364025 | 3_4:-80531177 | Msa0526630:CDS |
| ACATTACAAATTCAGGTATC+TGG | 0.370312 | 3_4:-80526654 | Msa0526630:CDS |
| CTGTTGGCATTTCTGTGAGC+AGG | 0.378616 | 3_4:-80525099 | Msa0526630:CDS |
| TTCTTTGAAGATTATAACTA+AGG | 0.386399 | 3_4:+80524692 | None:intergenic |
| AAGGCATTCCTTTCTCAGAT+TGG | 0.387289 | 3_4:-80526981 | Msa0526630:CDS |
| CAAGCTTGTTGAAGGCAATC+AGG | 0.400468 | 3_4:-80526797 | Msa0526630:intron |
| GTTGGATGGTCTTGGCTTGG+AGG | 0.412438 | 3_4:-80529523 | Msa0526630:CDS |
| ACCTTGTAAACTCCACCATT+TGG | 0.421144 | 3_4:+80526595 | None:intergenic |
| GCTTAAGTTAGTTGATGATC+AGG | 0.424364 | 3_4:-80531115 | Msa0526630:CDS |
| ATGCAGGACATTACAAATTC+AGG | 0.425759 | 3_4:-80526661 | Msa0526630:intron |
| AATAAAGAGTTGGATGGTCT+TGG | 0.429452 | 3_4:-80529531 | Msa0526630:CDS |
| ATTCATTAACATGGAGATGA+TGG | 0.440009 | 3_4:+80524951 | None:intergenic |
| CACCGCTGTTATTGCCGCTC+AGG | 0.440113 | 3_4:-80531067 | Msa0526630:intron |
| GACATTAACAATGGGCCAAA+TGG | 0.445188 | 3_4:-80526610 | Msa0526630:CDS |
| AATAACAGCGGTGTCATATC+CGG | 0.447170 | 3_4:+80531077 | None:intergenic |
| AGAAGAATTGTCATTATAGA+TGG | 0.450133 | 3_4:+80530099 | None:intergenic |
| GTATTACCTACTGCTGCAAT+AGG | 0.451703 | 3_4:-80529917 | Msa0526630:CDS |
| AGACTTATAAGATACTGAAT+TGG | 0.454666 | 3_4:+80524805 | None:intergenic |
| TTGCGGAGTTGTCCTTATCT+AGG | 0.468475 | 3_4:-80530129 | Msa0526630:CDS |
| GCCAAATGGTGGAGTTTACA+AGG | 0.472835 | 3_4:-80526596 | Msa0526630:intron |
| TGTCAATGACATCAGACAAT+TGG | 0.481147 | 3_4:+80531151 | None:intergenic |
| TTTGGAACTATAAATGAGCT+AGG | 0.484947 | 3_4:-80524746 | Msa0526630:three_prime_UTR |
| AGAGTTGGATGGTCTTGGCT+TGG | 0.489401 | 3_4:-80529526 | Msa0526630:CDS |
| AGGGACTTGCAGAACTTACA+AGG | 0.490753 | 3_4:-80526327 | Msa0526630:CDS |
| GATATTGTTACATGCGGTGG+AGG | 0.493713 | 3_4:-80529886 | Msa0526630:CDS |
| GAAAAGCTCAAGCTTGTTGA+AGG | 0.494401 | 3_4:-80526805 | Msa0526630:CDS |
| ACTGCTGCAATAGGAGCTGC+TGG | 0.497908 | 3_4:-80529908 | Msa0526630:CDS |
| ATGAGAACCTTGGAGGAGGC+AGG | 0.500102 | 3_4:+80531315 | None:intergenic |
| TATTATGGGTGAGCTCTCAA+TGG | 0.500584 | 3_4:+80525195 | None:intergenic |
| GGATGGTCTTGGCTTGGAGG+TGG | 0.511954 | 3_4:-80529520 | Msa0526630:CDS |
| TGATGTCATTGACAAGCTTA+AGG | 0.512815 | 3_4:-80531142 | Msa0526630:CDS |
| CTGCTCACAGAAATGCCAAC+AGG | 0.518943 | 3_4:+80525100 | None:intergenic |
| TCCAAGGTTCTCATCCTCGT+TGG | 0.519469 | 3_4:-80531306 | Msa0526630:CDS |
| TTTATTGAAGACATTAACAA+TGG | 0.522580 | 3_4:-80526619 | Msa0526630:CDS |
| AAATCAAATGATGTCTGAGC+TGG | 0.523352 | 3_4:-80526940 | Msa0526630:intron |
| TGTTGGCATTTCTGTGAGCA+GGG | 0.525043 | 3_4:-80525098 | Msa0526630:CDS |
| ATGTAGGGCGGAACGGAAGT+AGG | 0.525891 | 3_4:+80531520 | None:intergenic |
| TGATCAGCCTGCATGATCAA+TGG | 0.528814 | 3_4:-80525033 | Msa0526630:three_prime_UTR |
| AACGAGGATGAGAACCTTGG+AGG | 0.530591 | 3_4:+80531308 | None:intergenic |
| CAGGTTAAGATTTCAACCTC+CGG | 0.532263 | 3_4:-80531096 | Msa0526630:CDS |
| GATCAGCTGTAATTTAAAGA+AGG | 0.534312 | 3_4:+80525051 | None:intergenic |
| CATCACACCCAATCTGAGAA+AGG | 0.536724 | 3_4:+80526973 | None:intergenic |
| TTATTGAAGACATTAACAAT+GGG | 0.537142 | 3_4:-80526618 | Msa0526630:CDS |
| ACCTGAGGAGAAAGCCCCTA+AGG | 0.541700 | 3_4:-80525336 | Msa0526630:intron |
| GTTCTCATCCTCGTTGGAGC+CGG | 0.542164 | 3_4:-80531300 | Msa0526630:intron |
| AAAAGCATATAATAAAGAGT+TGG | 0.546183 | 3_4:-80529541 | Msa0526630:CDS |
| ACTTCCGTTCCGCCCTACAT+AGG | 0.547830 | 3_4:-80531517 | Msa0526630:five_prime_UTR |
| TCTTCTTCTCCGATGTGAAG+CGG | 0.548247 | 3_4:+80531388 | None:intergenic |
| TTGGAACTATAAATGAGCTA+GGG | 0.551880 | 3_4:-80524745 | Msa0526630:three_prime_UTR |
| TGGAACTATAAATGAGCTAG+GGG | 0.559430 | 3_4:-80524744 | Msa0526630:three_prime_UTR |
| AGTTCTGTTGTTATGAATGG+TGG | 0.562314 | 3_4:-80531174 | Msa0526630:CDS |
| ATTAACAATGGGCCAAATGG+TGG | 0.565885 | 3_4:-80526607 | Msa0526630:CDS |
| ACTTTGAATCGCTTGGTCCG+TGG | 0.565947 | 3_4:-80531449 | Msa0526630:five_prime_UTR |
| ACCTACCATGGCTTTACAGA+TGG | 0.571433 | 3_4:-80531340 | Msa0526630:exon |
| ATTTCCTATGTAGGGCGGAA+CGG | 0.579173 | 3_4:+80531513 | None:intergenic |
| AGAACTTACAAGGGCACTTG+AGG | 0.581677 | 3_4:-80526317 | Msa0526630:CDS |
| CTGGATATTGTTACATGCGG+TGG | 0.587309 | 3_4:-80529889 | Msa0526630:CDS |
| GATGGCACCTGCCTCCTCCA+AGG | 0.588504 | 3_4:-80531322 | Msa0526630:CDS |
| CATACAGGTGAAGGAACTGA+AGG | 0.591549 | 3_4:-80527000 | Msa0526630:intron |
| GATGGTCTTAGACCTAGATA+AGG | 0.591561 | 3_4:+80530117 | None:intergenic |
| GTTGGCATTTCTGTGAGCAG+GGG | 0.594630 | 3_4:-80525097 | Msa0526630:CDS |
| TATAATGACAATTCTTCTAG+AGG | 0.596108 | 3_4:-80530094 | Msa0526630:intron |
| GCAGCTCCTATTGCAGCAGT+AGG | 0.604279 | 3_4:+80529911 | None:intergenic |
| TGCATATTTCCTATGTAGGG+CGG | 0.604718 | 3_4:+80531508 | None:intergenic |
| GAGACACAAATTCATTAACA+TGG | 0.606227 | 3_4:+80524942 | None:intergenic |
| GAGGATGAGAACCTTGGAGG+AGG | 0.610275 | 3_4:+80531311 | None:intergenic |
| AAGTTAAAAGCAACTATGCA+AGG | 0.611533 | 3_4:+80531468 | None:intergenic |
| GCATATAATAAAGAGTTGGA+TGG | 0.616480 | 3_4:-80529537 | Msa0526630:CDS |
| TCCAACGAGGATGAGAACCT+TGG | 0.617937 | 3_4:+80531305 | None:intergenic |
| ACTGAATCCATTGATCATGC+AGG | 0.618168 | 3_4:+80525026 | None:intergenic |
| TTACTAAATCAAGAGTACAC+AGG | 0.620214 | 3_4:-80525129 | Msa0526630:CDS |
| GTACACAGGGCATATCCTGT+TGG | 0.622120 | 3_4:-80525115 | Msa0526630:CDS |
| GTGTTCATTCCGCTTCACAT+CGG | 0.623766 | 3_4:-80531397 | Msa0526630:five_prime_UTR |
| AGAACTTACGATGGCACCTG+AGG | 0.627951 | 3_4:-80525351 | Msa0526630:CDS |
| AGGTGCCATCTGTAAAGCCA+TGG | 0.628164 | 3_4:+80531335 | None:intergenic |
| TACATCCGACAAGTATCCGA+AGG | 0.629437 | 3_4:+80524834 | None:intergenic |
| TTGAATCGCTTGGTCCGTGG+AGG | 0.630455 | 3_4:-80531446 | Msa0526630:five_prime_UTR |
| TACTAAATCAAGAGTACACA+GGG | 0.632279 | 3_4:-80525128 | Msa0526630:CDS |
| AACGTAACAACAACCTACCA+TGG | 0.645219 | 3_4:-80531352 | Msa0526630:exon |
| TGGTCCGTGGAGGACATAGA+CGG | 0.646769 | 3_4:-80531436 | Msa0526630:five_prime_UTR |
| GCAACTAGCACAAGAAATTG+CGG | 0.652131 | 3_4:-80530146 | Msa0526630:CDS |
| AACAGCGGTGTCATATCCGG+AGG | 0.656806 | 3_4:+80531080 | None:intergenic |
| GCCATCTGTAAAGCCATGGT+AGG | 0.668792 | 3_4:+80531339 | None:intergenic |
| CTGCTGGATATTGTTACATG+CGG | 0.670661 | 3_4:-80529892 | Msa0526630:CDS |
| ATTACCGTCTATGTCCTCCA+CGG | 0.677472 | 3_4:+80531432 | None:intergenic |
| GGGACTTGCAGAACTTACAA+GGG | 0.685663 | 3_4:-80526326 | Msa0526630:CDS |
| TTAAAAGCAACTATGCAAGG+TGG | 0.694802 | 3_4:+80531471 | None:intergenic |
| ATATTGTTACATGCGGTGGA+GGG | 0.695562 | 3_4:-80529885 | Msa0526630:intron |
| TACCTGAGCGGCAATAACAG+CGG | 0.697080 | 3_4:+80531065 | None:intergenic |
| CATAGTATACAAAACCTTAG+GGG | 0.697644 | 3_4:+80525322 | None:intergenic |
| GTGAAGCGGAATGAACACGA+GGG | 0.701523 | 3_4:+80531402 | None:intergenic |
| GAGACTTGAAGAACTTACGA+TGG | 0.705891 | 3_4:-80525360 | Msa0526630:CDS |
| TGTGAAGCGGAATGAACACG+AGG | 0.706796 | 3_4:+80531401 | None:intergenic |
| TGAAGCGGAATGAACACGAG+GGG | 0.707645 | 3_4:+80531403 | None:intergenic |
| CAGAGTAGACAAAACCTTGG+GGG | 0.711472 | 3_4:+80526288 | None:intergenic |
| GAAGAATACCGGCTCCAACG+AGG | 0.738604 | 3_4:+80531292 | None:intergenic |
| GGAACTATAAATGAGCTAGG+GGG | 0.742735 | 3_4:-80524743 | Msa0526630:three_prime_UTR |
| GGAGAAGAAGAAATCGACGA+CGG | 0.745433 | 3_4:-80531376 | Msa0526630:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTGAAATAATATAAATAAA+CGG | + | chr3_4:80525450-80525469 | None:intergenic | 10.0% |
| !! | AAGAATTATTTGAATAATAT+TGG | + | chr3_4:80525953-80525972 | None:intergenic | 10.0% |
| !!! | TAGAAATTTAAAATCATTAT+TGG | + | chr3_4:80527675-80527694 | None:intergenic | 10.0% |
| !!! | TTTATTGTTATTTAGTATTT+AGG | + | chr3_4:80528159-80528178 | None:intergenic | 10.0% |
| !!! | ATGAAATTACTTTTTTTTAT+AGG | + | chr3_4:80528214-80528233 | None:intergenic | 10.0% |
| !!! | TTTTAGTTATTTAGTTTTTA+GGG | + | chr3_4:80528578-80528597 | None:intergenic | 10.0% |
| !!! | ATTTTAGTTATTTAGTTTTT+AGG | + | chr3_4:80528579-80528598 | None:intergenic | 10.0% |
| !! | AAAAAGATGTATAATAAATA+GGG | - | chr3_4:80528840-80528859 | Msa0526630:intron | 10.0% |
| !!! | ATTTTGTTTATTTTTTAGAA+AGG | - | chr3_4:80529745-80529764 | Msa0526630:CDS | 10.0% |
| !!! | GAGAAATTTTATTTTAATTA+TGG | + | chr3_4:80530221-80530240 | None:intergenic | 10.0% |
| !! | TGAACTTAAATTTATATTAA+CGG | - | chr3_4:80530431-80530450 | Msa0526630:intron | 10.0% |
| !! | TATATTGTTTGTTTGTAATT+CGG | - | chr3_4:80525268-80525287 | Msa0526630:intron | 15.0% |
| !!! | TATCTTTTATTTAGAATAAC+AGG | + | chr3_4:80526863-80526882 | None:intergenic | 15.0% |
| !! | ATAATTTATCAATTAGCATA+AGG | - | chr3_4:80526880-80526899 | Msa0526630:intron | 15.0% |
| !!! | GGTTTTAAATTTCATAATTA+GGG | + | chr3_4:80528193-80528212 | None:intergenic | 15.0% |
| !!! | AGGTTTTAAATTTCATAATT+AGG | + | chr3_4:80528194-80528213 | None:intergenic | 15.0% |
| !!! | TTTAGTTATTTAGTTTTTAG+GGG | + | chr3_4:80528577-80528596 | None:intergenic | 15.0% |
| !! | GAAAAAGATGTATAATAAAT+AGG | - | chr3_4:80528839-80528858 | Msa0526630:intron | 15.0% |
| !! | AAAAGATGTATAATAAATAG+GGG | - | chr3_4:80528841-80528860 | Msa0526630:intron | 15.0% |
| !! | AAAGAAATAATTAATGTAGT+TGG | - | chr3_4:80528873-80528892 | Msa0526630:intron | 15.0% |
| !!! | TTTAATAATACCATTTCTTT+TGG | + | chr3_4:80529087-80529106 | None:intergenic | 15.0% |
| !! | TATTAAACTTGAACTTTATT+TGG | - | chr3_4:80529100-80529119 | Msa0526630:intron | 15.0% |
| !! | ATTTACAACAAAAAAAATCA+GGG | + | chr3_4:80529548-80529567 | None:intergenic | 15.0% |
| !! | TATTTACAACAAAAAAAATC+AGG | + | chr3_4:80529549-80529568 | None:intergenic | 15.0% |
| !!! | AAACAATATTTTTTTCTTTC+CGG | + | chr3_4:80530503-80530522 | None:intergenic | 15.0% |
| !!! | TCAAAATTCTACATTCATTT+TGG | - | chr3_4:80525193-80525212 | Msa0526630:CDS | 20.0% |
| !! | ATTAACGAAAAACACATTTA+AGG | - | chr3_4:80525343-80525362 | Msa0526630:CDS | 20.0% |
| !!! | AAAAGCATATAATAAAGAGT+TGG | - | chr3_4:80526691-80526710 | Msa0526630:intron | 20.0% |
| !! | CATGAATTCAATTCTTATTA+AGG | + | chr3_4:80527520-80527539 | None:intergenic | 20.0% |
| !!! | ACATTATTGATTGAATATGT+TGG | + | chr3_4:80527583-80527602 | None:intergenic | 20.0% |
| !!! | AACTAAATGTTTTCATATGA+TGG | - | chr3_4:80528046-80528065 | Msa0526630:intron | 20.0% |
| !! | TAAAATAGGAACAATTCTTA+GGG | + | chr3_4:80528101-80528120 | None:intergenic | 20.0% |
| !! | TTAAAATAGGAACAATTCTT+AGG | + | chr3_4:80528102-80528121 | None:intergenic | 20.0% |
| !! | TACTATTGTAATCAATCATT+CGG | - | chr3_4:80528463-80528482 | Msa0526630:intron | 20.0% |
| !!! | AGAATTTTGATGCATAATAA+GGG | + | chr3_4:80528618-80528637 | None:intergenic | 20.0% |
| !!! | TAGAATTTTGATGCATAATA+AGG | + | chr3_4:80528619-80528638 | None:intergenic | 20.0% |
| !!! | CAAGTTTAAAATTTTCATAC+AGG | - | chr3_4:80529217-80529236 | Msa0526630:intron | 20.0% |
| !! | AAAAAGGTGATTATTCAATT+TGG | + | chr3_4:80529368-80529387 | None:intergenic | 20.0% |
| !!! | TTCAAGTTAGAACATAAAAA+AGG | + | chr3_4:80529384-80529403 | None:intergenic | 20.0% |
| !! | TTTATTGAAGACATTAACAA+TGG | - | chr3_4:80529613-80529632 | Msa0526630:intron | 20.0% |
| !! | TTATTGAAGACATTAACAAT+GGG | - | chr3_4:80529614-80529633 | Msa0526630:intron | 20.0% |
| !! | AATTTCTCAAAATATAGTGT+AGG | + | chr3_4:80530055-80530074 | None:intergenic | 20.0% |
| !! | AGTACTATATGTATATATGT+TGG | - | chr3_4:80530079-80530098 | Msa0526630:intron | 20.0% |
| !! | ACTGAAGTAAAAAATTTACA+AGG | + | chr3_4:80530588-80530607 | None:intergenic | 20.0% |
| !!! | CCAAATTTCTTTGTTATTAT+GGG | + | chr3_4:80531054-80531073 | None:intergenic | 20.0% |
| !!! | ACCAAATTTCTTTGTTATTA+TGG | + | chr3_4:80531055-80531074 | None:intergenic | 20.0% |
| !!! | TTCTTTGAAGATTATAACTA+AGG | + | chr3_4:80531543-80531562 | None:intergenic | 20.0% |
| !! | TTTTGCATATTTCCTATGTA+GGG | + | chr3_4:80524730-80524749 | None:intergenic | 25.0% |
| ! | GAAAAATAAGAGAAGAATAC+CGG | + | chr3_4:80524954-80524973 | None:intergenic | 25.0% |
| ! | AGTTAGTTAGTTAATCAGTT+TGG | + | chr3_4:80525298-80525317 | None:intergenic | 25.0% |
| ! | TACCACTAGGAATAATATTT+CGG | - | chr3_4:80525481-80525500 | Msa0526630:intron | 25.0% |
| !! | AAGTTTCAATTTGATGATTG+CGG | - | chr3_4:80525527-80525546 | Msa0526630:intron | 25.0% |
| ! | CTTAGGATATTTATTCTGTT+TGG | - | chr3_4:80525821-80525840 | Msa0526630:intron | 25.0% |
| ! | ATCAATATAAGAAGAGTAGT+AGG | + | chr3_4:80525893-80525912 | None:intergenic | 25.0% |
| ! | AGAAGAATTGTCATTATAGA+TGG | + | chr3_4:80526136-80526155 | None:intergenic | 25.0% |
| ! | TATAATGACAATTCTTCTAG+AGG | - | chr3_4:80526138-80526157 | Msa0526630:intron | 25.0% |
| ! | ATTTATCAATTAGCATAAGG+TGG | - | chr3_4:80526883-80526902 | Msa0526630:intron | 25.0% |
| !! | TCAATTTTCTTCTTTCACTT+AGG | - | chr3_4:80526974-80526993 | Msa0526630:CDS | 25.0% |
| ! | TATGCAAAAAGAGATGTATA+TGG | + | chr3_4:80527099-80527118 | None:intergenic | 25.0% |
| !! | ATATACATCTCTTTTTGCAT+AGG | - | chr3_4:80527098-80527117 | Msa0526630:intron | 25.0% |
| ! | ATCTACTATCTAGCTATTAT+TGG | + | chr3_4:80527150-80527169 | None:intergenic | 25.0% |
| ! | CGTAATTAAATTTGAACATG+AGG | + | chr3_4:80527759-80527778 | None:intergenic | 25.0% |
| !!! | TTTTGAGATATTGAAAGAGA+CGG | + | chr3_4:80527841-80527860 | None:intergenic | 25.0% |
| ! | TTAATCATCAAAAAGTCATG+TGG | - | chr3_4:80528021-80528040 | Msa0526630:intron | 25.0% |
| !!! | AGAATTGTTCCTATTTTAAG+AGG | - | chr3_4:80528103-80528122 | Msa0526630:intron | 25.0% |
| !!! | GAATTGTTCCTATTTTAAGA+GGG | - | chr3_4:80528104-80528123 | Msa0526630:intron | 25.0% |
| ! | ATCATATTCCCTCTTAAAAT+AGG | + | chr3_4:80528115-80528134 | None:intergenic | 25.0% |
| ! | AAATTTCATAATTAGGGCTT+GGG | + | chr3_4:80528187-80528206 | None:intergenic | 25.0% |
| ! | TAAATTTCATAATTAGGGCT+TGG | + | chr3_4:80528188-80528207 | None:intergenic | 25.0% |
| ! | TGTCTAAATGATTAAACTGA+AGG | - | chr3_4:80528490-80528509 | Msa0526630:intron | 25.0% |
| !!! | AAACTGAAGGCTTTTTTTTA+TGG | - | chr3_4:80528503-80528522 | Msa0526630:intron | 25.0% |
| ! | TAAACTAATTCTCTCTCTTA+AGG | + | chr3_4:80528787-80528806 | None:intergenic | 25.0% |
| !!! | GTTTTCCATATGCTATTTAT+TGG | - | chr3_4:80528808-80528827 | Msa0526630:intron | 25.0% |
| ! | AATCACCAATAAATAGCATA+TGG | + | chr3_4:80528816-80528835 | None:intergenic | 25.0% |
| ! | GACTCAAAAAATTCTCAAAA+GGG | - | chr3_4:80528923-80528942 | Msa0526630:intron | 25.0% |
| !! | TCAAAAGGGTCTTATAATTA+GGG | - | chr3_4:80528937-80528956 | Msa0526630:intron | 25.0% |
| !! | CTTTATTTGGTCCTTAATAA+TGG | - | chr3_4:80529113-80529132 | Msa0526630:intron | 25.0% |
| ! | CAAAACATACTCCATTATTA+AGG | + | chr3_4:80529127-80529146 | None:intergenic | 25.0% |
| !! | TGTAAAAATTCATTTTGCCA+AGG | + | chr3_4:80529185-80529204 | None:intergenic | 25.0% |
| !! | TAAAATTTTCATACAGGTGA+AGG | - | chr3_4:80529223-80529242 | Msa0526630:intron | 25.0% |
| !!! | TTTTGTTGTAAATATCATGC+AGG | - | chr3_4:80529555-80529574 | Msa0526630:intron | 25.0% |
| !! | TTCTTATGCAAATTTTGAAC+AGG | - | chr3_4:80529885-80529904 | Msa0526630:intron | 25.0% |
| !! | TCTTATGCAAATTTTGAACA+GGG | - | chr3_4:80529886-80529905 | Msa0526630:CDS | 25.0% |
| ! | TTTATTGCCTTTCAATTAAG+TGG | - | chr3_4:80529967-80529986 | Msa0526630:intron | 25.0% |
| ! | TAAGCTTCAAACATATCTAT+TGG | + | chr3_4:80530138-80530157 | None:intergenic | 25.0% |
| ! | ACAAAATGTACTATACATAG+TGG | - | chr3_4:80530630-80530649 | Msa0526630:intron | 25.0% |
| !! | TAGCCAGAAATTTTAAATAG+TGG | + | chr3_4:80530661-80530680 | None:intergenic | 25.0% |
| !! | ACATTTCTAAAAAAACCACA+GGG | + | chr3_4:80530692-80530711 | None:intergenic | 25.0% |
| !! | AACATTTCTAAAAAAACCAC+AGG | + | chr3_4:80530693-80530712 | None:intergenic | 25.0% |
| !! | AATATTGCTCTAGATTATCA+TGG | - | chr3_4:80530792-80530811 | Msa0526630:intron | 25.0% |
| ! | TTGAAATACCCATAAAAACA+AGG | + | chr3_4:80530850-80530869 | None:intergenic | 25.0% |
| ! | ACATAGTATACAAAACCTTA+GGG | + | chr3_4:80530914-80530933 | None:intergenic | 25.0% |
| !! | TTATTTCAAGTATGTGTTTC+AGG | - | chr3_4:80530984-80531003 | Msa0526630:intron | 25.0% |
| !! | TATTTCAAGTATGTGTTTCA+GGG | - | chr3_4:80530985-80531004 | Msa0526630:intron | 25.0% |
| ! | CCCATAATAACAAAGAAATT+TGG | - | chr3_4:80531051-80531070 | Msa0526630:intron | 25.0% |
| !! | ATTGTCAAGTATTTTTCACA+TGG | - | chr3_4:80531363-80531382 | Msa0526630:five_prime_UTR | 25.0% |
| !! | ATGGATTTGTATTTTTCCTT+CGG | - | chr3_4:80531382-80531401 | Msa0526630:five_prime_UTR | 25.0% |
| ! | AGACTTATAAGATACTGAAT+TGG | + | chr3_4:80531430-80531449 | None:intergenic | 25.0% |
| !!! | TTAAGTATTTTAGCAACGTT+TGG | - | chr3_4:80531468-80531487 | Msa0526630:five_prime_UTR | 25.0% |
| ! | ATAGAATTGATGAAAAACTG+AGG | - | chr3_4:80531513-80531532 | Msa0526630:five_prime_UTR | 25.0% |
| ! | CTTTTGCATATTTCCTATGT+AGG | + | chr3_4:80524731-80524750 | None:intergenic | 30.0% |
| AAGTTAAAAGCAACTATGCA+AGG | + | chr3_4:80524767-80524786 | None:intergenic | 30.0% | |
| ACAATAATTCAAAACCAACG+AGG | + | chr3_4:80525010-80525029 | None:intergenic | 30.0% | |
| !!! | GTGTTTTGTTTTGCAATTTC+AGG | - | chr3_4:80525028-80525047 | Msa0526630:three_prime_UTR | 30.0% |
| !!! | TTGTTTTGCAATTTCAGGTT+TGG | - | chr3_4:80525033-80525052 | Msa0526630:three_prime_UTR | 30.0% |
| !! | GAATTTTGAAAATACCTGAG+CGG | + | chr3_4:80525182-80525201 | None:intergenic | 30.0% |
| !!! | ATTTTGGTTCCTAAATGTGT+TGG | - | chr3_4:80525209-80525228 | Msa0526630:CDS | 30.0% |
| TTGTGATTTCGATACATTCA+GGG | + | chr3_4:80525235-80525254 | None:intergenic | 30.0% | |
| TTTGTGATTTCGATACATTC+AGG | + | chr3_4:80525236-80525255 | None:intergenic | 30.0% | |
| GAAATCACAAAAACATCGTT+GGG | - | chr3_4:80525245-80525264 | Msa0526630:intron | 30.0% | |
| ACCACTAGGAATAATATTTC+GGG | - | chr3_4:80525482-80525501 | Msa0526630:intron | 30.0% | |
| ! | AGTTTCAATTTGATGATTGC+GGG | - | chr3_4:80525528-80525547 | Msa0526630:intron | 30.0% |
| ! | TTACAAAGGTGTATTGAAGT+AGG | - | chr3_4:80525584-80525603 | Msa0526630:intron | 30.0% |
| ! | AAAATTACCTCCTTTTAGCA+TGG | - | chr3_4:80525697-80525716 | Msa0526630:intron | 30.0% |
| ATAAAGAAACAAAGGAGAAG+AGG | - | chr3_4:80525750-80525769 | Msa0526630:intron | 30.0% | |
| TAAAGAAACAAAGGAGAAGA+GGG | - | chr3_4:80525751-80525770 | Msa0526630:intron | 30.0% | |
| TATAAGAAGAGTAGTAGGTT+TGG | + | chr3_4:80525888-80525907 | None:intergenic | 30.0% | |
| TTTCTTCACAATGAACTTGT+TGG | - | chr3_4:80526026-80526045 | Msa0526630:intron | 30.0% | |
| ! | GCAAATGTCTATTTAACTTC+AGG | - | chr3_4:80526059-80526078 | Msa0526630:intron | 30.0% |
| ! | TGTCTATTTAACTTCAGGTT+CGG | - | chr3_4:80526064-80526083 | Msa0526630:intron | 30.0% |
| ! | TTTTCCTTTCTTTCTTCTGA+TGG | - | chr3_4:80526218-80526237 | Msa0526630:intron | 30.0% |
| TATACCATCAGAAGAAAGAA+AGG | + | chr3_4:80526225-80526244 | None:intergenic | 30.0% | |
| !! | TTGAGTTGAGCTGTAATAAT+TGG | - | chr3_4:80526252-80526271 | Msa0526630:intron | 30.0% |
| ! | AATTGGCCTATGTTAACATT+TGG | - | chr3_4:80526269-80526288 | Msa0526630:intron | 30.0% |
| ! | ATTGGCCTATGTTAACATTT+GGG | - | chr3_4:80526270-80526289 | Msa0526630:intron | 30.0% |
| ATTTGTGAAGAAAAGAAGCT+GGG | + | chr3_4:80526384-80526403 | None:intergenic | 30.0% | |
| TTACATCTCACATCATATTC+TGG | + | chr3_4:80526422-80526441 | None:intergenic | 30.0% | |
| ! | TAGCAGTAAGTAGCTTTTAT+TGG | - | chr3_4:80526577-80526596 | Msa0526630:intron | 30.0% |
| GCATATAATAAAGAGTTGGA+TGG | - | chr3_4:80526695-80526714 | Msa0526630:intron | 30.0% | |
| GATGTCTTTAACTAGACTAA+TGG | + | chr3_4:80526794-80526813 | None:intergenic | 30.0% | |
| AGTAATTCACATCAACAATG+TGG | - | chr3_4:80526816-80526835 | Msa0526630:intron | 30.0% | |
| ! | TCTTCTTTCACTTAGGATTT+TGG | - | chr3_4:80526981-80527000 | Msa0526630:CDS | 30.0% |
| ! | CTTCTTTCACTTAGGATTTT+GGG | - | chr3_4:80526982-80527001 | Msa0526630:CDS | 30.0% |
| ! | AATCAAGGTTAGTTGATCAA+GGG | + | chr3_4:80527064-80527083 | None:intergenic | 30.0% |
| ! | AAATCAAGGTTAGTTGATCA+AGG | + | chr3_4:80527065-80527084 | None:intergenic | 30.0% |
| ! | TCAACTAACCTTGATTTTTG+TGG | - | chr3_4:80527068-80527087 | Msa0526630:intron | 30.0% |
| ! | CAACTAACCTTGATTTTTGT+GGG | - | chr3_4:80527069-80527088 | Msa0526630:intron | 30.0% |
| TATAAGTCATTACCAGTCAA+AGG | + | chr3_4:80527544-80527563 | None:intergenic | 30.0% | |
| !!! | AGCTTGAACTTTTTTAAGAG+TGG | + | chr3_4:80527640-80527659 | None:intergenic | 30.0% |
| ACTCTTAAAAAAGTTCAAGC+TGG | - | chr3_4:80527639-80527658 | Msa0526630:intron | 30.0% | |
| ! | TAAAGAAGCATGTTTACCAT+GGG | + | chr3_4:80527940-80527959 | None:intergenic | 30.0% |
| ! | TTAAAGAAGCATGTTTACCA+TGG | + | chr3_4:80527941-80527960 | None:intergenic | 30.0% |
| CCAATTTACATCATATTCCT+CGG | - | chr3_4:80528248-80528267 | Msa0526630:intron | 30.0% | |
| CAATTTACATCATATTCCTC+GGG | - | chr3_4:80528249-80528268 | Msa0526630:intron | 30.0% | |
| AGAGTCAAGGAAAATTCAAA+TGG | - | chr3_4:80528286-80528305 | Msa0526630:intron | 30.0% | |
| CTATGAATACCAAATTGATG+TGG | - | chr3_4:80528346-80528365 | Msa0526630:intron | 30.0% | |
| AATACCAAATTGATGTGGAA+TGG | - | chr3_4:80528351-80528370 | Msa0526630:intron | 30.0% | |
| TTAAAATAGGACCTATTAGG+GGG | + | chr3_4:80528546-80528565 | None:intergenic | 30.0% | |
| CTTAAAATAGGACCTATTAG+GGG | + | chr3_4:80528547-80528566 | None:intergenic | 30.0% | |
| GCTTAAAATAGGACCTATTA+GGG | + | chr3_4:80528548-80528567 | None:intergenic | 30.0% | |
| AGCTTAAAATAGGACCTATT+AGG | + | chr3_4:80528549-80528568 | None:intergenic | 30.0% | |
| AATCACGGGAATTAAGAAAT+TGG | - | chr3_4:80528712-80528731 | Msa0526630:intron | 30.0% | |
| AATGTAGTTGGAAATAGCAA+AGG | - | chr3_4:80528885-80528904 | Msa0526630:intron | 30.0% | |
| ATGTAGTTGGAAATAGCAAA+GGG | - | chr3_4:80528886-80528905 | Msa0526630:intron | 30.0% | |
| GGACTCAAAAAATTCTCAAA+AGG | - | chr3_4:80528922-80528941 | Msa0526630:intron | 30.0% | |
| ! | CTCAAAAGGGTCTTATAATT+AGG | - | chr3_4:80528936-80528955 | Msa0526630:intron | 30.0% |
| !! | TACCATTTCTTTTGGAAACA+CGG | + | chr3_4:80529079-80529098 | None:intergenic | 30.0% |
| TGATTATTCAATTTGGCTAG+AGG | + | chr3_4:80529361-80529380 | None:intergenic | 30.0% | |
| AATCAATCACTTTACTTGAC+AGG | - | chr3_4:80529402-80529421 | Msa0526630:intron | 30.0% | |
| ! | TAAGTTTAACTTTGCAGACA+TGG | - | chr3_4:80529468-80529487 | Msa0526630:intron | 30.0% |
| ! | AAGTTTAACTTTGCAGACAT+GGG | - | chr3_4:80529469-80529488 | Msa0526630:intron | 30.0% |
| ACATTACAAATTCAGGTATC+TGG | - | chr3_4:80529578-80529597 | Msa0526630:intron | 30.0% | |
| TGTGTATAAGTAGTCACTAA+AGG | - | chr3_4:80529722-80529741 | Msa0526630:CDS | 30.0% | |
| TATATTGCTCTGCATTATCA+TGG | - | chr3_4:80529849-80529868 | Msa0526630:intron | 30.0% | |
| ! | ACACCATTGTTGATCTTTTA+AGG | - | chr3_4:80530300-80530319 | Msa0526630:intron | 30.0% |
| ! | CACCATTGTTGATCTTTTAA+GGG | - | chr3_4:80530301-80530320 | Msa0526630:intron | 30.0% |
| AACCCTTAAAAGATCAACAA+TGG | + | chr3_4:80530306-80530325 | None:intergenic | 30.0% | |
| !! | TTTTAAGGGTTAAACTCTCA+AGG | - | chr3_4:80530315-80530334 | Msa0526630:intron | 30.0% |
| TTTAAGGGTTAAACTCTCAA+GGG | - | chr3_4:80530316-80530335 | Msa0526630:intron | 30.0% | |
| ! | CCAGAAATTTTAAATAGTGG+AGG | + | chr3_4:80530658-80530677 | None:intergenic | 30.0% |
| ! | CCTCCACTATTTAAAATTTC+TGG | - | chr3_4:80530655-80530674 | Msa0526630:intron | 30.0% |
| !!! | AATACTGAGCCTTGTTTTTA+TGG | - | chr3_4:80530838-80530857 | Msa0526630:intron | 30.0% |
| !!! | ATACTGAGCCTTGTTTTTAT+GGG | - | chr3_4:80530839-80530858 | Msa0526630:intron | 30.0% |
| CATAGTATACAAAACCTTAG+GGG | + | chr3_4:80530913-80530932 | None:intergenic | 30.0% | |
| GACATAGTATACAAAACCTT+AGG | + | chr3_4:80530915-80530934 | None:intergenic | 30.0% | |
| ! | ATTTCAAGTATGTGTTTCAG+GGG | - | chr3_4:80530986-80531005 | Msa0526630:intron | 30.0% |
| ! | TTACTAAATCAAGAGTACAC+AGG | - | chr3_4:80531103-80531122 | Msa0526630:CDS | 30.0% |
| ! | TACTAAATCAAGAGTACACA+GGG | - | chr3_4:80531104-80531123 | Msa0526630:CDS | 30.0% |
| GATCAGCTGTAATTTAAAGA+AGG | + | chr3_4:80531184-80531203 | None:intergenic | 30.0% | |
| !!! | CAGTGACAGTACTTTTTTTA+CGG | - | chr3_4:80531225-80531244 | Msa0526630:intron | 30.0% |
| ATTCATTAACATGGAGATGA+TGG | + | chr3_4:80531284-80531303 | None:intergenic | 30.0% | |
| GAGACACAAATTCATTAACA+TGG | + | chr3_4:80531293-80531312 | None:intergenic | 30.0% | |
| ! | TTTGGAACTATAAATGAGCT+AGG | - | chr3_4:80531486-80531505 | Msa0526630:five_prime_UTR | 30.0% |
| TTGGAACTATAAATGAGCTA+GGG | - | chr3_4:80531487-80531506 | Msa0526630:five_prime_UTR | 30.0% | |
| TTAAAAGCAACTATGCAAGG+TGG | + | chr3_4:80524764-80524783 | None:intergenic | 35.0% | |
| !!! | GCTTTTAACTTTGAATCGCT+TGG | - | chr3_4:80524776-80524795 | Msa0526630:three_prime_UTR | 35.0% |
| !! | GCTAGTTCTGTTGTTATGAA+TGG | - | chr3_4:80525055-80525074 | Msa0526630:three_prime_UTR | 35.0% |
| AGTTCTGTTGTTATGAATGG+TGG | - | chr3_4:80525058-80525077 | Msa0526630:three_prime_UTR | 35.0% | |
| TGTCAATGACATCAGACAAT+TGG | + | chr3_4:80525084-80525103 | None:intergenic | 35.0% | |
| TGATGTCATTGACAAGCTTA+AGG | - | chr3_4:80525090-80525109 | Msa0526630:CDS | 35.0% | |
| !! | GCTTAAGTTAGTTGATGATC+AGG | - | chr3_4:80525117-80525136 | Msa0526630:CDS | 35.0% |
| CGAAATCACAAAAACATCGT+TGG | - | chr3_4:80525244-80525263 | Msa0526630:intron | 35.0% | |
| GTGCATAGTATATTACCACT+AGG | - | chr3_4:80525468-80525487 | Msa0526630:intron | 35.0% | |
| ACCCGAAATATTATTCCTAG+TGG | + | chr3_4:80525486-80525505 | None:intergenic | 35.0% | |
| TGTTAGTAAGTCCACAGATA+TGG | - | chr3_4:80525561-80525580 | Msa0526630:intron | 35.0% | |
| AATGTAGAGAGTTTGAACCA+TGG | - | chr3_4:80525616-80525635 | Msa0526630:intron | 35.0% | |
| ATGTAGAGAGTTTGAACCAT+GGG | - | chr3_4:80525617-80525636 | Msa0526630:intron | 35.0% | |
| TATCCATCCACTAATCATCT+GGG | + | chr3_4:80525733-80525752 | None:intergenic | 35.0% | |
| TTATCCATCCACTAATCATC+TGG | + | chr3_4:80525734-80525753 | None:intergenic | 35.0% | |
| GTGGATGGATAAAGAAACAA+AGG | - | chr3_4:80525742-80525761 | Msa0526630:intron | 35.0% | |
| GAGTGATGCAAGTATAAATC+AGG | - | chr3_4:80525786-80525805 | Msa0526630:intron | 35.0% | |
| GTTTGTAGAAGAAGTTGTGA+TGG | + | chr3_4:80526173-80526192 | None:intergenic | 35.0% | |
| CATTTGTGAAGAAAAGAAGC+TGG | + | chr3_4:80526385-80526404 | None:intergenic | 35.0% | |
| TTACCACTATTGTGCAGAAT+TGG | - | chr3_4:80526463-80526482 | Msa0526630:intron | 35.0% | |
| AATAAAGAGTTGGATGGTCT+TGG | - | chr3_4:80526701-80526720 | Msa0526630:intron | 35.0% | |
| TCAAGGGAAAAGTGGTAATA+AGG | + | chr3_4:80527048-80527067 | None:intergenic | 35.0% | |
| TTAGTTGATCAAGGGAAAAG+TGG | + | chr3_4:80527056-80527075 | None:intergenic | 35.0% | |
| ! | TATTCTGACACAATTTTCCC+TGG | + | chr3_4:80527213-80527232 | None:intergenic | 35.0% |
| ! | TCGAAGTGTTTACATCACAA+AGG | + | chr3_4:80527294-80527313 | None:intergenic | 35.0% |
| ! | AAGCTTGTTTGCTAGTATGT+TGG | - | chr3_4:80527317-80527336 | Msa0526630:intron | 35.0% |
| TTGGATGTAGGCTAACATTA+AGG | + | chr3_4:80527461-80527480 | None:intergenic | 35.0% | |
| AAGTGATAGGATAGTGATGT+TGG | + | chr3_4:80527480-80527499 | None:intergenic | 35.0% | |
| GACTACTACAAGAAAGTGAT+AGG | + | chr3_4:80527493-80527512 | None:intergenic | 35.0% | |
| TTGAATTCATGACCTTTGAC+TGG | - | chr3_4:80527529-80527548 | Msa0526630:intron | 35.0% | |
| !! | ATTTCTAGCATATCCTGTCA+AGG | - | chr3_4:80527688-80527707 | Msa0526630:intron | 35.0% |
| ACGAAATGCAAAACCTTCTT+GGG | + | chr3_4:80527879-80527898 | None:intergenic | 35.0% | |
| AACGAAATGCAAAACCTTCT+TGG | + | chr3_4:80527880-80527899 | None:intergenic | 35.0% | |
| TCTTTAAGTGCAAATTGCTG+TGG | - | chr3_4:80527954-80527973 | Msa0526630:intron | 35.0% | |
| CCGAGGAATATGATGTAAAT+TGG | + | chr3_4:80528251-80528270 | None:intergenic | 35.0% | |
| ! | TTGAATTTTCCTTGACTCTC+TGG | + | chr3_4:80528285-80528304 | None:intergenic | 35.0% |
| ATGATCTTTACTTCACTCAC+AGG | + | chr3_4:80528320-80528339 | None:intergenic | 35.0% | |
| CAAAAGGATACGCTTATTGA+GGG | + | chr3_4:80528386-80528405 | None:intergenic | 35.0% | |
| AGTTTGAGTCAAAGAAGCAA+CGG | + | chr3_4:80528421-80528440 | None:intergenic | 35.0% | |
| TATAAAGCTAACCCCCTAAT+AGG | - | chr3_4:80528532-80528551 | Msa0526630:intron | 35.0% | |
| AGGGGTTTCAAGCTTAAAAT+AGG | + | chr3_4:80528559-80528578 | None:intergenic | 35.0% | |
| GCAAAAGGGTCCTATAATTA+GGG | + | chr3_4:80528689-80528708 | None:intergenic | 35.0% | |
| AGCAAAAGGGTCCTATAATT+AGG | + | chr3_4:80528690-80528709 | None:intergenic | 35.0% | |
| !! | TTCCCGTGATTTTAGCAAAA+GGG | + | chr3_4:80528703-80528722 | None:intergenic | 35.0% |
| !! | ATTCCCGTGATTTTAGCAAA+AGG | + | chr3_4:80528704-80528723 | None:intergenic | 35.0% |
| TGTAGTTGGAAATAGCAAAG+GGG | - | chr3_4:80528887-80528906 | Msa0526630:intron | 35.0% | |
| ! | AGCAAAGGGGTCTTATAAAA+AGG | - | chr3_4:80528900-80528919 | Msa0526630:intron | 35.0% |
| ! | GCAAAGGGGTCTTATAAAAA+GGG | - | chr3_4:80528901-80528920 | Msa0526630:intron | 35.0% |
| ! | AAGGGTCTTATAATTAGGGA+CGG | - | chr3_4:80528941-80528960 | Msa0526630:intron | 35.0% |
| TACCGTGTTTCCAAAAGAAA+TGG | - | chr3_4:80529074-80529093 | Msa0526630:intron | 35.0% | |
| ! | TTTGCAGTTTGCTTAATGCT+AGG | - | chr3_4:80529157-80529176 | Msa0526630:intron | 35.0% |
| AAATCAAATGATGTCTGAGC+TGG | - | chr3_4:80529292-80529311 | Msa0526630:intron | 35.0% | |
| ATGCAGGACATTACAAATTC+AGG | - | chr3_4:80529571-80529590 | Msa0526630:intron | 35.0% | |
| CTTATACACAACTAGATGAG+TGG | + | chr3_4:80529693-80529712 | None:intergenic | 35.0% | |
| AACAGAGTAGACAAAACCTT+GGG | + | chr3_4:80529949-80529968 | None:intergenic | 35.0% | |
| AAACAGAGTAGACAAAACCT+TGG | + | chr3_4:80529950-80529969 | None:intergenic | 35.0% | |
| TCGAGAACCACTTAATTGAA+AGG | + | chr3_4:80529977-80529996 | None:intergenic | 35.0% | |
| TATGTTGGTATTTGACCAAG+TGG | - | chr3_4:80530094-80530113 | Msa0526630:intron | 35.0% | |
| ATTGGATGATAGATGAGTGT+AGG | + | chr3_4:80530120-80530139 | None:intergenic | 35.0% | |
| ! | GATTTTGTCTCACTTGTAGT+TGG | - | chr3_4:80530180-80530199 | Msa0526630:intron | 35.0% |
| ! | ACTCTAATTTGCAAGTCTAC+TGG | + | chr3_4:80530477-80530496 | None:intergenic | 35.0% |
| ACTTGCAAATTAGAGTTTGC+CGG | - | chr3_4:80530481-80530500 | Msa0526630:intron | 35.0% | |
| AAAAAATCGCAGGCACAAAA+GGG | - | chr3_4:80531254-80531273 | Msa0526630:intron | 35.0% | |
| ! | TTTTTCCTTCGGATACTTGT+CGG | - | chr3_4:80531393-80531412 | Msa0526630:five_prime_UTR | 35.0% |
| TGGAACTATAAATGAGCTAG+GGG | - | chr3_4:80531488-80531507 | Msa0526630:five_prime_UTR | 35.0% | |
| TGCATATTTCCTATGTAGGG+CGG | + | chr3_4:80524727-80524746 | None:intergenic | 40.0% | |
| AACGTAACAACAACCTACCA+TGG | - | chr3_4:80524880-80524899 | Msa0526630:three_prime_UTR | 40.0% | |
| CAGGTTAAGATTTCAACCTC+CGG | - | chr3_4:80525136-80525155 | Msa0526630:CDS | 40.0% | |
| !! | AATAACAGCGGTGTCATATC+CGG | + | chr3_4:80525158-80525177 | None:intergenic | 40.0% |
| ACACACTCGATGATGAATTC+AGG | - | chr3_4:80525386-80525405 | Msa0526630:intron | 40.0% | |
| CACACTCGATGATGAATTCA+GGG | - | chr3_4:80525387-80525406 | Msa0526630:intron | 40.0% | |
| GTCCACAGATATGGTTACAA+AGG | - | chr3_4:80525570-80525589 | Msa0526630:intron | 40.0% | |
| CACCTTTGTAACCATATCTG+TGG | + | chr3_4:80525575-80525594 | None:intergenic | 40.0% | |
| TGTAGAGAGTTTGAACCATG+GGG | - | chr3_4:80525618-80525637 | Msa0526630:intron | 40.0% | |
| GGGAGTCTTGATGAGAATAT+GGG | - | chr3_4:80525638-80525657 | Msa0526630:intron | 40.0% | |
| AGTCTTGATGAGAATATGGG+AGG | - | chr3_4:80525641-80525660 | Msa0526630:intron | 40.0% | |
| GTCTTGATGAGAATATGGGA+GGG | - | chr3_4:80525642-80525661 | Msa0526630:intron | 40.0% | |
| ATCCAGGTAGTTAGATGATC+AGG | - | chr3_4:80525674-80525693 | Msa0526630:intron | 40.0% | |
| TTCCTGATCATCTAACTACC+TGG | + | chr3_4:80525679-80525698 | None:intergenic | 40.0% | |
| TCAGGTCACTGAAATTGCTT+AGG | - | chr3_4:80525804-80525823 | Msa0526630:intron | 40.0% | |
| GCAACTAGCACAAGAAATTG+CGG | - | chr3_4:80526086-80526105 | Msa0526630:intron | 40.0% | |
| ! | GATGGTCTTAGACCTAGATA+AGG | + | chr3_4:80526118-80526137 | None:intergenic | 40.0% |
| TATGTTAACATTTGGGCGCA+GGG | - | chr3_4:80526277-80526296 | Msa0526630:intron | 40.0% | |
| GTATTACCTACTGCTGCAAT+AGG | - | chr3_4:80526315-80526334 | Msa0526630:CDS | 40.0% | |
| CTGCTGGATATTGTTACATG+CGG | - | chr3_4:80526340-80526359 | Msa0526630:intron | 40.0% | |
| ATATTGTTACATGCGGTGGA+GGG | - | chr3_4:80526347-80526366 | Msa0526630:intron | 40.0% | |
| TGACCAATTCTGCACAATAG+TGG | + | chr3_4:80526469-80526488 | None:intergenic | 40.0% | |
| TCAATTAGCATAAGGTGGAG+AGG | - | chr3_4:80526888-80526907 | Msa0526630:intron | 40.0% | |
| CAATTAGCATAAGGTGGAGA+GGG | - | chr3_4:80526889-80526908 | Msa0526630:intron | 40.0% | |
| !! | TAGCACCGAAACAAGCTTTT+AGG | - | chr3_4:80527243-80527262 | Msa0526630:intron | 40.0% |
| ! | GCTTGCCTAAAAGCTTGTTT+CGG | + | chr3_4:80527251-80527270 | None:intergenic | 40.0% |
| GGTCAACCATGATAATTCTG+TGG | + | chr3_4:80527273-80527292 | None:intergenic | 40.0% | |
| AGGAGAGGAATTGTGATAGT+GGG | + | chr3_4:80527392-80527411 | None:intergenic | 40.0% | |
| TAGGAGAGGAATTGTGATAG+TGG | + | chr3_4:80527393-80527412 | None:intergenic | 40.0% | |
| CAACTTTCTTAGGTAGTGCT+AGG | + | chr3_4:80527412-80527431 | None:intergenic | 40.0% | |
| CCTAGAAAGGCAACTTTCTT+AGG | + | chr3_4:80527422-80527441 | None:intergenic | 40.0% | |
| CCTAAGAAAGTTGCCTTTCT+AGG | - | chr3_4:80527419-80527438 | Msa0526630:intron | 40.0% | |
| GGCTAACATTAAGGCAATGT+GGG | + | chr3_4:80527452-80527471 | None:intergenic | 40.0% | |
| AGGCTAACATTAAGGCAATG+TGG | + | chr3_4:80527453-80527472 | None:intergenic | 40.0% | |
| AGGATAGTGATGTTGGATGT+AGG | + | chr3_4:80527473-80527492 | None:intergenic | 40.0% | |
| CACACTGAAACACGAACAAA+GGG | + | chr3_4:80527610-80527629 | None:intergenic | 40.0% | |
| ACACACTGAAACACGAACAA+AGG | + | chr3_4:80527611-80527630 | None:intergenic | 40.0% | |
| GATATTGAAAGAGACGGTCT+GGG | + | chr3_4:80527835-80527854 | None:intergenic | 40.0% | |
| AGATATTGAAAGAGACGGTC+TGG | + | chr3_4:80527836-80527855 | None:intergenic | 40.0% | |
| ! | CCTTTGCTATGTCTACAAGT+AGG | + | chr3_4:80528072-80528091 | None:intergenic | 40.0% |
| CCTACTTGTAGACATAGCAA+AGG | - | chr3_4:80528069-80528088 | Msa0526630:intron | 40.0% | |
| ! | AATTTTCCTTGACTCTCTGG+AGG | + | chr3_4:80528282-80528301 | None:intergenic | 40.0% |
| CTCTCCATTCCACATCAATT+TGG | + | chr3_4:80528358-80528377 | None:intergenic | 40.0% | |
| CAAATTGATGTGGAATGGAG+AGG | - | chr3_4:80528356-80528375 | Msa0526630:intron | 40.0% | |
| CCAAAAGGATACGCTTATTG+AGG | + | chr3_4:80528387-80528406 | None:intergenic | 40.0% | |
| ! | CCTCAATAAGCGTATCCTTT+TGG | - | chr3_4:80528384-80528403 | Msa0526630:intron | 40.0% |
| AAGGGTCCTATAATTAGGGA+CGG | + | chr3_4:80528685-80528704 | None:intergenic | 40.0% | |
| ! | GGACCCTTTTGCTAAAATCA+CGG | - | chr3_4:80528697-80528716 | Msa0526630:intron | 40.0% |
| ! | GACCCTTTTGCTAAAATCAC+GGG | - | chr3_4:80528698-80528717 | Msa0526630:intron | 40.0% |
| ! | AAGGCATTCCTTTCTCAGAT+TGG | - | chr3_4:80529251-80529270 | Msa0526630:intron | 40.0% |
| AGGCATTCCTTTCTCAGATT+GGG | - | chr3_4:80529252-80529271 | Msa0526630:intron | 40.0% | |
| !! | GAAAAGCTCAAGCTTGTTGA+AGG | - | chr3_4:80529427-80529446 | Msa0526630:intron | 40.0% |
| GACATTAACAATGGGCCAAA+TGG | - | chr3_4:80529622-80529641 | Msa0526630:intron | 40.0% | |
| ATTAACAATGGGCCAAATGG+TGG | - | chr3_4:80529625-80529644 | Msa0526630:intron | 40.0% | |
| ACCTTGTAAACTCCACCATT+TGG | + | chr3_4:80529640-80529659 | None:intergenic | 40.0% | |
| ATACACAACTAGATGAGTGG+AGG | + | chr3_4:80529690-80529709 | None:intergenic | 40.0% | |
| ACAGAGTAGACAAAACCTTG+GGG | + | chr3_4:80529948-80529967 | None:intergenic | 40.0% | |
| AAACTACAAGTGAGTGAACG+AGG | + | chr3_4:80530280-80530299 | None:intergenic | 40.0% | |
| TCACACACTTTAGCTACGAA+GGG | + | chr3_4:80530549-80530568 | None:intergenic | 40.0% | |
| TTCACACACTTTAGCTACGA+AGG | + | chr3_4:80530550-80530569 | None:intergenic | 40.0% | |
| GAGACTTGAAGAACTTACGA+TGG | - | chr3_4:80530872-80530891 | Msa0526630:intron | 40.0% | |
| TACTTGAAATAAGTCACCGC+TGG | + | chr3_4:80530976-80530995 | None:intergenic | 40.0% | |
| TATTATGGGTGAGCTCTCAA+TGG | + | chr3_4:80531040-80531059 | None:intergenic | 40.0% | |
| ACTGAATCCATTGATCATGC+AGG | + | chr3_4:80531209-80531228 | None:intergenic | 40.0% | |
| ! | CTTTTGTGCCTGCGATTTTT+TGG | + | chr3_4:80531255-80531274 | None:intergenic | 40.0% |
| CAAAAAATCGCAGGCACAAA+AGG | - | chr3_4:80531253-80531272 | Msa0526630:intron | 40.0% | |
| GGAACTATAAATGAGCTAGG+GGG | - | chr3_4:80531489-80531508 | Msa0526630:five_prime_UTR | 40.0% | |
| ATTTCCTATGTAGGGCGGAA+CGG | + | chr3_4:80524722-80524741 | None:intergenic | 45.0% | |
| ATTACCGTCTATGTCCTCCA+CGG | + | chr3_4:80524803-80524822 | None:intergenic | 45.0% | |
| GTGTTCATTCCGCTTCACAT+CGG | - | chr3_4:80524835-80524854 | Msa0526630:three_prime_UTR | 45.0% | |
| TCTTCTTCTCCGATGTGAAG+CGG | + | chr3_4:80524847-80524866 | None:intergenic | 45.0% | |
| GGAGAAGAAGAAATCGACGA+CGG | - | chr3_4:80524856-80524875 | Msa0526630:three_prime_UTR | 45.0% | |
| ! | ACCTACCATGGCTTTACAGA+TGG | - | chr3_4:80524892-80524911 | Msa0526630:three_prime_UTR | 45.0% |
| ! | GCTTTCAAGTGTATCCTCGT+TGG | - | chr3_4:80524993-80525012 | Msa0526630:three_prime_UTR | 45.0% |
| CATTCAGGGCCAACACATTT+AGG | + | chr3_4:80525221-80525240 | None:intergenic | 45.0% | |
| ATTCTCATCAAGACTCCCCA+TGG | + | chr3_4:80525636-80525655 | None:intergenic | 45.0% | |
| GGGGAGTCTTGATGAGAATA+TGG | - | chr3_4:80525637-80525656 | Msa0526630:intron | 45.0% | |
| ! | TTACCTCCTTTTAGCATGGC+AGG | - | chr3_4:80525701-80525720 | Msa0526630:intron | 45.0% |
| ! | TACCTCCTTTTAGCATGGCA+GGG | - | chr3_4:80525702-80525721 | Msa0526630:intron | 45.0% |
| AGAAACAAAGGAGAAGAGGG+AGG | - | chr3_4:80525754-80525773 | Msa0526630:intron | 45.0% | |
| TTGCGGAGTTGTCCTTATCT+AGG | - | chr3_4:80526103-80526122 | Msa0526630:intron | 45.0% | |
| CTGCGCCCAAATGTTAACAT+AGG | + | chr3_4:80526278-80526297 | None:intergenic | 45.0% | |
| CTATGTTAACATTTGGGCGC+AGG | - | chr3_4:80526276-80526295 | Msa0526630:intron | 45.0% | |
| ATGTTAACATTTGGGCGCAG+GGG | - | chr3_4:80526278-80526297 | Msa0526630:intron | 45.0% | |
| CTGGATATTGTTACATGCGG+TGG | - | chr3_4:80526343-80526362 | Msa0526630:intron | 45.0% | |
| GATATTGTTACATGCGGTGG+AGG | - | chr3_4:80526346-80526365 | Msa0526630:intron | 45.0% | |
| ATATCCATGCTTCAAGCCCA+AGG | - | chr3_4:80526920-80526939 | Msa0526630:intron | 45.0% | |
| TATCCATGCTTCAAGCCCAA+GGG | - | chr3_4:80526921-80526940 | Msa0526630:intron | 45.0% | |
| TGGAGAGCCCACAAAAATCA+AGG | + | chr3_4:80527079-80527098 | None:intergenic | 45.0% | |
| GGCAAGCCACAGAATTATCA+TGG | - | chr3_4:80527264-80527283 | Msa0526630:intron | 45.0% | |
| TTCTTAGGTAGTGCTAGGAG+AGG | + | chr3_4:80527407-80527426 | None:intergenic | 45.0% | |
| !! | TGTGGGCTAGATTCCTAGAA+AGG | + | chr3_4:80527435-80527454 | None:intergenic | 45.0% |
| ATCCTGTCAAGGATGAGCTT+TGG | - | chr3_4:80527699-80527718 | Msa0526630:intron | 45.0% | |
| TCCTGTCAAGGATGAGCTTT+GGG | - | chr3_4:80527700-80527719 | Msa0526630:intron | 45.0% | |
| ! | TTGCAGTTGATGTCCCAAGA+AGG | - | chr3_4:80527863-80527882 | Msa0526630:intron | 45.0% |
| CTACCTCCGTCCCTAATTAT+AGG | - | chr3_4:80528676-80528695 | Msa0526630:intron | 45.0% | |
| ! | GGTCTTATAATTAGGGACGG+AGG | - | chr3_4:80528944-80528963 | Msa0526630:intron | 45.0% |
| ! | TTTGCAGCTCTGACTTCGAT+TGG | - | chr3_4:80528993-80529012 | Msa0526630:intron | 45.0% |
| ! | TTGCAGCTCTGACTTCGATT+GGG | - | chr3_4:80528994-80529013 | Msa0526630:intron | 45.0% |
| AATCCCACTGTCCACTAATG+GGG | + | chr3_4:80529023-80529042 | None:intergenic | 45.0% | |
| CAATCCCACTGTCCACTAAT+GGG | + | chr3_4:80529024-80529043 | None:intergenic | 45.0% | |
| TTGCTTAATGCTAGGTGCCT+TGG | - | chr3_4:80529165-80529184 | Msa0526630:intron | 45.0% | |
| CATACAGGTGAAGGAACTGA+AGG | - | chr3_4:80529232-80529251 | Msa0526630:intron | 45.0% | |
| CATCACACCCAATCTGAGAA+AGG | + | chr3_4:80529262-80529281 | None:intergenic | 45.0% | |
| !! | CAAGCTTGTTGAAGGCAATC+AGG | - | chr3_4:80529435-80529454 | Msa0526630:intron | 45.0% |
| ! | GCCAAATGGTGGAGTTTACA+AGG | - | chr3_4:80529636-80529655 | Msa0526630:intron | 45.0% |
| AGGGACTTGCAGAACTTACA+AGG | - | chr3_4:80529905-80529924 | Msa0526630:CDS | 45.0% | |
| GGGACTTGCAGAACTTACAA+GGG | - | chr3_4:80529906-80529925 | Msa0526630:CDS | 45.0% | |
| !! | AGAACTTACAAGGGCACTTG+AGG | - | chr3_4:80529915-80529934 | Msa0526630:CDS | 45.0% |
| CAGAGTAGACAAAACCTTGG+GGG | + | chr3_4:80529947-80529966 | None:intergenic | 45.0% | |
| AGGCACATACACCATTGTGT+GGG | - | chr3_4:80530023-80530042 | Msa0526630:intron | 45.0% | |
| ATAGATGAGTGTAGGCCACT+TGG | + | chr3_4:80530112-80530131 | None:intergenic | 45.0% | |
| CTAAAAAAACCACAGGGCAG+CGG | + | chr3_4:80530686-80530705 | None:intergenic | 45.0% | |
| TGTTGGCATTTCTGTGAGCA+GGG | - | chr3_4:80531134-80531153 | Msa0526630:CDS | 45.0% | |
| TGATCAGCCTGCATGATCAA+TGG | - | chr3_4:80531199-80531218 | Msa0526630:intron | 45.0% | |
| ACGGACAACCAAAAAATCGC+AGG | - | chr3_4:80531244-80531263 | Msa0526630:intron | 45.0% | |
| TACATCCGACAAGTATCCGA+AGG | + | chr3_4:80531401-80531420 | None:intergenic | 45.0% | |
| !! | TAAAATACTTAAATTAAATT+TGG | + | chr3_4:80531460-80531479 | None:intergenic | 5.0% |
| ACTTTGAATCGCTTGGTCCG+TGG | - | chr3_4:80524783-80524802 | Msa0526630:three_prime_UTR | 50.0% | |
| TGAAGCGGAATGAACACGAG+GGG | + | chr3_4:80524832-80524851 | None:intergenic | 50.0% | |
| GTGAAGCGGAATGAACACGA+GGG | + | chr3_4:80524833-80524852 | None:intergenic | 50.0% | |
| TGTGAAGCGGAATGAACACG+AGG | + | chr3_4:80524834-80524853 | None:intergenic | 50.0% | |
| GCCATCTGTAAAGCCATGGT+AGG | + | chr3_4:80524896-80524915 | None:intergenic | 50.0% | |
| ! | AGGTGCCATCTGTAAAGCCA+TGG | + | chr3_4:80524900-80524919 | None:intergenic | 50.0% |
| AACGAGGATGAGAACCTTGG+AGG | + | chr3_4:80524927-80524946 | None:intergenic | 50.0% | |
| TCCAAGGTTCTCATCCTCGT+TGG | - | chr3_4:80524926-80524945 | Msa0526630:three_prime_UTR | 50.0% | |
| TCCAACGAGGATGAGAACCT+TGG | + | chr3_4:80524930-80524949 | None:intergenic | 50.0% | |
| TACCTGAGCGGCAATAACAG+CGG | + | chr3_4:80525170-80525189 | None:intergenic | 50.0% | |
| TGATGAGAATATGGGAGGGC+AGG | - | chr3_4:80525646-80525665 | Msa0526630:intron | 50.0% | |
| TTCCCTGCCATGCTAAAAGG+AGG | + | chr3_4:80525707-80525726 | None:intergenic | 50.0% | |
| ! | TCCTTTTAGCATGGCAGGGA+AGG | - | chr3_4:80525706-80525725 | Msa0526630:intron | 50.0% |
| TCCTTCCCTGCCATGCTAAA+AGG | + | chr3_4:80525710-80525729 | None:intergenic | 50.0% | |
| GGAAGGACCCAGATGATTAG+TGG | - | chr3_4:80525723-80525742 | Msa0526630:intron | 50.0% | |
| GGACCCAGATGATTAGTGGA+TGG | - | chr3_4:80525727-80525746 | Msa0526630:intron | 50.0% | |
| GAGAAGAGGGAGGAAGAGTT+TGG | - | chr3_4:80525764-80525783 | Msa0526630:intron | 50.0% | |
| !! | TGTTTGGTAGCGAGAGTGAG+CGG | - | chr3_4:80525837-80525856 | Msa0526630:intron | 50.0% |
| TGTTAACATTTGGGCGCAGG+GGG | - | chr3_4:80526279-80526298 | Msa0526630:intron | 50.0% | |
| ! | AGAGTTGGATGGTCTTGGCT+TGG | - | chr3_4:80526706-80526725 | Msa0526630:intron | 50.0% |
| AGATGCGAGATTAGCAGCCA+GGG | - | chr3_4:80527193-80527212 | Msa0526630:intron | 50.0% | |
| GTCAACATCATGCTGTGGTG+AGG | + | chr3_4:80527370-80527389 | None:intergenic | 50.0% | |
| AGTGGGTCAACATCATGCTG+TGG | + | chr3_4:80527375-80527394 | None:intergenic | 50.0% | |
| TCCCAAAGCTCATCCTTGAC+AGG | + | chr3_4:80527704-80527723 | None:intergenic | 50.0% | |
| ! | ACGGTCTGGGACATCAAATG+CGG | + | chr3_4:80527822-80527841 | None:intergenic | 50.0% |
| TTCGTTTGCATGCTTGACCC+AGG | - | chr3_4:80527894-80527913 | Msa0526630:intron | 50.0% | |
| TTGCATGCTTGACCCAGGAT+AGG | - | chr3_4:80527899-80527918 | Msa0526630:intron | 50.0% | |
| TGACCCAGGATAGGTAACCT+TGG | - | chr3_4:80527908-80527927 | Msa0526630:intron | 50.0% | |
| GCTCCAAGGTTACCTATCCT+GGG | + | chr3_4:80527914-80527933 | None:intergenic | 50.0% | |
| TGCTCCAAGGTTACCTATCC+TGG | + | chr3_4:80527915-80527934 | None:intergenic | 50.0% | |
| !! | TTTACCATGGGAGTGCTCCA+AGG | + | chr3_4:80527928-80527947 | None:intergenic | 50.0% |
| GAATCTCCTCCAGAGAGTCA+AGG | - | chr3_4:80528273-80528292 | Msa0526630:intron | 50.0% | |
| GGTCCTATAATTAGGGACGG+AGG | + | chr3_4:80528682-80528701 | None:intergenic | 50.0% | |
| ATCCCACTGTCCACTAATGG+GGG | + | chr3_4:80529022-80529041 | None:intergenic | 50.0% | |
| CCAATCCCACTGTCCACTAA+TGG | + | chr3_4:80529025-80529044 | None:intergenic | 50.0% | |
| ! | CCATTAGTGGACAGTGGGAT+TGG | - | chr3_4:80529022-80529041 | Msa0526630:intron | 50.0% |
| ACTTGAGGAAAAAGCCCCCA+AGG | - | chr3_4:80529930-80529949 | Msa0526630:CDS | 50.0% | |
| GAGGCACATACACCATTGTG+TGG | - | chr3_4:80530022-80530041 | Msa0526630:intron | 50.0% | |
| AGAACTTACGATGGCACCTG+AGG | - | chr3_4:80530881-80530900 | Msa0526630:intron | 50.0% | |
| GTTCTCGAACTTGTAGCCAG+CGG | - | chr3_4:80530957-80530976 | Msa0526630:intron | 50.0% | |
| GGTGAGCTCTCAATGGTTTC+TGG | + | chr3_4:80531033-80531052 | None:intergenic | 50.0% | |
| GTACACAGGGCATATCCTGT+TGG | - | chr3_4:80531117-80531136 | Msa0526630:CDS | 50.0% | |
| CTGCTCACAGAAATGCCAAC+AGG | + | chr3_4:80531135-80531154 | None:intergenic | 50.0% | |
| CTGTTGGCATTTCTGTGAGC+AGG | - | chr3_4:80531133-80531152 | Msa0526630:CDS | 50.0% | |
| GTTGGCATTTCTGTGAGCAG+GGG | - | chr3_4:80531135-80531154 | Msa0526630:CDS | 50.0% | |
| !! | GAGCAGGGGCATTACTGATT+TGG | - | chr3_4:80531149-80531168 | Msa0526630:CDS | 50.0% |
| ATGTAGGGCGGAACGGAAGT+AGG | + | chr3_4:80524715-80524734 | None:intergenic | 55.0% | |
| ACTTCCGTTCCGCCCTACAT+AGG | - | chr3_4:80524715-80524734 | Msa0526630:three_prime_UTR | 55.0% | |
| TTGAATCGCTTGGTCCGTGG+AGG | - | chr3_4:80524786-80524805 | Msa0526630:three_prime_UTR | 55.0% | |
| TGGTCCGTGGAGGACATAGA+CGG | - | chr3_4:80524796-80524815 | Msa0526630:three_prime_UTR | 55.0% | |
| ATGAGAACCTTGGAGGAGGC+AGG | + | chr3_4:80524920-80524939 | None:intergenic | 55.0% | |
| GAGGATGAGAACCTTGGAGG+AGG | + | chr3_4:80524924-80524943 | None:intergenic | 55.0% | |
| GTTCTCATCCTCGTTGGAGC+CGG | - | chr3_4:80524932-80524951 | Msa0526630:three_prime_UTR | 55.0% | |
| !! | GAAGAATACCGGCTCCAACG+AGG | + | chr3_4:80524943-80524962 | None:intergenic | 55.0% |
| !! | AACAGCGGTGTCATATCCGG+AGG | + | chr3_4:80525155-80525174 | None:intergenic | 55.0% |
| !! | GTTTGGTAGCGAGAGTGAGC+GGG | - | chr3_4:80525838-80525857 | Msa0526630:intron | 55.0% |
| !! | TTTGGTAGCGAGAGTGAGCG+GGG | - | chr3_4:80525839-80525858 | Msa0526630:intron | 55.0% |
| GCAGCTCCTATTGCAGCAGT+AGG | + | chr3_4:80526324-80526343 | None:intergenic | 55.0% | |
| ACTGCTGCAATAGGAGCTGC+TGG | - | chr3_4:80526324-80526343 | Msa0526630:CDS | 55.0% | |
| !! | GTTGGATGGTCTTGGCTTGG+AGG | - | chr3_4:80526709-80526728 | Msa0526630:intron | 55.0% |
| AAGCCCTTGGGCTTGAAGCA+TGG | + | chr3_4:80526927-80526946 | None:intergenic | 55.0% | |
| ! | AGCCCAAGGGCTTGTTTGAG+AGG | - | chr3_4:80526934-80526953 | Msa0526630:intron | 55.0% |
| ! | GCCCAAGGGCTTGTTTGAGA+GGG | - | chr3_4:80526935-80526954 | Msa0526630:intron | 55.0% |
| GCCCTCTCAAACAAGCCCTT+GGG | + | chr3_4:80526939-80526958 | None:intergenic | 55.0% | |
| CAGATGCGAGATTAGCAGCC+AGG | - | chr3_4:80527192-80527211 | Msa0526630:intron | 55.0% | |
| ATCCAACTGCGACCCTACAC+AGG | - | chr3_4:80527344-80527363 | Msa0526630:intron | 55.0% | |
| ! | CGGTCTGGGACATCAAATGC+GGG | + | chr3_4:80527821-80527840 | None:intergenic | 55.0% |
| ! | GTAACCTTGGAGCACTCCCA+TGG | - | chr3_4:80527921-80527940 | Msa0526630:intron | 55.0% |
| ! | TCCCCCCATTAGTGGACAGT+GGG | - | chr3_4:80529017-80529036 | Msa0526630:intron | 55.0% |
| TCCCACTGTCCACTAATGGG+GGG | + | chr3_4:80529021-80529040 | None:intergenic | 55.0% | |
| !! | GGATTGGTCCTCCGAACAGT+CGG | - | chr3_4:80529038-80529057 | Msa0526630:intron | 55.0% |
| GTAGGCATGTGCCCACACAA+TGG | + | chr3_4:80530037-80530056 | None:intergenic | 55.0% | |
| ACCTGAGGAGAAAGCCCCTA+AGG | - | chr3_4:80530896-80530915 | Msa0526630:intron | 55.0% | |
| ACCTTAGGGGCTTTCTCCTC+AGG | + | chr3_4:80530900-80530919 | None:intergenic | 55.0% | |
| CACCGCTGTTATTGCCGCTC+AGG | - | chr3_4:80525165-80525184 | Msa0526630:CDS | 60.0% | |
| GGGAGGGCAGGAAAAGATCC+AGG | - | chr3_4:80525658-80525677 | Msa0526630:intron | 60.0% | |
| !! | GGATGGTCTTGGCTTGGAGG+TGG | - | chr3_4:80526712-80526731 | Msa0526630:intron | 60.0% |
| CGCCCTCTCAAACAAGCCCT+TGG | + | chr3_4:80526940-80526959 | None:intergenic | 60.0% | |
| GCTGTGGTGAGGCCTGTGTA+GGG | + | chr3_4:80527359-80527378 | None:intergenic | 60.0% | |
| TGCTGTGGTGAGGCCTGTGT+AGG | + | chr3_4:80527360-80527379 | None:intergenic | 60.0% | |
| ! | CTCTGGAGGAGATTCTCCCG+AGG | + | chr3_4:80528268-80528287 | None:intergenic | 60.0% |
| !! | ACGGAGCACTGCACGCCAAA+AGG | + | chr3_4:80528402-80528421 | None:intergenic | 60.0% |
| CGATTGGGTCCCCCCATTAG+TGG | - | chr3_4:80529009-80529028 | Msa0526630:intron | 60.0% | |
| ! | GTCCCCCCATTAGTGGACAG+TGG | - | chr3_4:80529016-80529035 | Msa0526630:intron | 60.0% |
| TCCTCCGAACAGTCGGTCCT+TGG | - | chr3_4:80529045-80529064 | Msa0526630:intron | 60.0% | |
| CCTCCGAACAGTCGGTCCTT+GGG | - | chr3_4:80529046-80529065 | Msa0526630:intron | 60.0% | |
| GAAACACGGTATCCCGCCCA+AGG | + | chr3_4:80529065-80529084 | None:intergenic | 60.0% | |
| TCTCGAACTCCTAGCCCCTG+TGG | - | chr3_4:80529991-80530010 | Msa0526630:intron | 60.0% | |
| AACTCCTAGCCCCTGTGGCA+GGG | - | chr3_4:80529996-80530015 | Msa0526630:intron | 60.0% | |
| GATGGCACCTGCCTCCTCCA+AGG | - | chr3_4:80524910-80524929 | Msa0526630:three_prime_UTR | 65.0% | |
| GGCCTGTGTAGGGTCGCAGT+TGG | + | chr3_4:80527349-80527368 | None:intergenic | 65.0% | |
| CCCAAGGACCGACTGTTCGG+AGG | + | chr3_4:80529049-80529068 | None:intergenic | 65.0% | |
| CCGCCCAAGGACCGACTGTT+CGG | + | chr3_4:80529052-80529071 | None:intergenic | 65.0% | |
| CCGAACAGTCGGTCCTTGGG+CGG | - | chr3_4:80529049-80529068 | Msa0526630:intron | 65.0% | |
| CGAACAGTCGGTCCTTGGGC+GGG | - | chr3_4:80529050-80529069 | Msa0526630:intron | 65.0% | |
| GAACTCCTAGCCCCTGTGGC+AGG | - | chr3_4:80529995-80530014 | Msa0526630:intron | 65.0% | |
| ACTCCTAGCCCCTGTGGCAG+GGG | - | chr3_4:80529997-80530016 | Msa0526630:intron | 65.0% | |
| CCTAGCCCCTGTGGCAGGGG+CGG | - | chr3_4:80530000-80530019 | Msa0526630:intron | 75.0% | |
| TGCCTCCGCCCCTGCCACAG+GGG | + | chr3_4:80530008-80530027 | None:intergenic | 75.0% | |
| GTGCCTCCGCCCCTGCCACA+GGG | + | chr3_4:80530009-80530028 | None:intergenic | 75.0% | |
| TGTGCCTCCGCCCCTGCCAC+AGG | + | chr3_4:80530010-80530029 | None:intergenic | 75.0% | |
| CTGGCTACGCCGCTGCCCTG+TGG | - | chr3_4:80530674-80530693 | Msa0526630:intron | 75.0% | |
| ! | CCGCCCCTGCCACAGGGGCT+AGG | + | chr3_4:80530003-80530022 | None:intergenic | 80.0% |
| ! | AGCCCCTGTGGCAGGGGCGG+AGG | - | chr3_4:80530003-80530022 | Msa0526630:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 80524665 | 80531589 | 80524665 | ID=Msa0526630;Name=Msa0526630 |
| chr3_4 | mRNA | 80524665 | 80531589 | 80524665 | ID=Msa0526630-mRNA-1;Parent=Msa0526630;Name=Msa0526630-mRNA-1;_AED=0.10;_eAED=0.10;_QI=234|0.90|0.91|1|1|1|12|413|328 |
| chr3_4 | exon | 80524665 | 80525248 | 80524665 | ID=Msa0526630-mRNA-1:exon:24221;Parent=Msa0526630-mRNA-1 |
| chr3_4 | exon | 80525337 | 80525381 | 80525337 | ID=Msa0526630-mRNA-1:exon:24220;Parent=Msa0526630-mRNA-1 |
| chr3_4 | exon | 80526303 | 80526347 | 80526303 | ID=Msa0526630-mRNA-1:exon:24219;Parent=Msa0526630-mRNA-1 |
| chr3_4 | exon | 80526597 | 80526677 | 80526597 | ID=Msa0526630-mRNA-1:exon:24218;Parent=Msa0526630-mRNA-1 |
| chr3_4 | exon | 80526798 | 80526830 | 80526798 | ID=Msa0526630-mRNA-1:exon:24217;Parent=Msa0526630-mRNA-1 |
| chr3_4 | exon | 80526941 | 80527015 | 80526941 | ID=Msa0526630-mRNA-1:exon:24216;Parent=Msa0526630-mRNA-1 |
| chr3_4 | exon | 80529482 | 80529570 | 80529482 | ID=Msa0526630-mRNA-1:exon:24215;Parent=Msa0526630-mRNA-1 |
| chr3_4 | exon | 80529669 | 80529774 | 80529669 | ID=Msa0526630-mRNA-1:exon:24214;Parent=Msa0526630-mRNA-1 |
| chr3_4 | exon | 80529886 | 80529956 | 80529886 | ID=Msa0526630-mRNA-1:exon:24213;Parent=Msa0526630-mRNA-1 |
| chr3_4 | exon | 80530095 | 80530173 | 80530095 | ID=Msa0526630-mRNA-1:exon:24212;Parent=Msa0526630-mRNA-1 |
| chr3_4 | exon | 80531068 | 80531204 | 80531068 | ID=Msa0526630-mRNA-1:exon:24211;Parent=Msa0526630-mRNA-1 |
| chr3_4 | exon | 80531301 | 80531589 | 80531301 | ID=Msa0526630-mRNA-1:exon:24210;Parent=Msa0526630-mRNA-1 |
| chr3_4 | five_prime_UTR | 80531356 | 80531589 | 80531356 | ID=Msa0526630-mRNA-1:five_prime_utr;Parent=Msa0526630-mRNA-1 |
| chr3_4 | CDS | 80531301 | 80531355 | 80531301 | ID=Msa0526630-mRNA-1:cds;Parent=Msa0526630-mRNA-1 |
| chr3_4 | CDS | 80531068 | 80531204 | 80531068 | ID=Msa0526630-mRNA-1:cds;Parent=Msa0526630-mRNA-1 |
| chr3_4 | CDS | 80530095 | 80530173 | 80530095 | ID=Msa0526630-mRNA-1:cds;Parent=Msa0526630-mRNA-1 |
| chr3_4 | CDS | 80529886 | 80529956 | 80529886 | ID=Msa0526630-mRNA-1:cds;Parent=Msa0526630-mRNA-1 |
| chr3_4 | CDS | 80529669 | 80529774 | 80529669 | ID=Msa0526630-mRNA-1:cds;Parent=Msa0526630-mRNA-1 |
| chr3_4 | CDS | 80529482 | 80529570 | 80529482 | ID=Msa0526630-mRNA-1:cds;Parent=Msa0526630-mRNA-1 |
| chr3_4 | CDS | 80526941 | 80527015 | 80526941 | ID=Msa0526630-mRNA-1:cds;Parent=Msa0526630-mRNA-1 |
| chr3_4 | CDS | 80526798 | 80526830 | 80526798 | ID=Msa0526630-mRNA-1:cds;Parent=Msa0526630-mRNA-1 |
| chr3_4 | CDS | 80526597 | 80526677 | 80526597 | ID=Msa0526630-mRNA-1:cds;Parent=Msa0526630-mRNA-1 |
| chr3_4 | CDS | 80526303 | 80526347 | 80526303 | ID=Msa0526630-mRNA-1:cds;Parent=Msa0526630-mRNA-1 |
| chr3_4 | CDS | 80525337 | 80525381 | 80525337 | ID=Msa0526630-mRNA-1:cds;Parent=Msa0526630-mRNA-1 |
| chr3_4 | CDS | 80525078 | 80525248 | 80525078 | ID=Msa0526630-mRNA-1:cds;Parent=Msa0526630-mRNA-1 |
| chr3_4 | three_prime_UTR | 80524665 | 80525077 | 80524665 | ID=Msa0526630-mRNA-1:three_prime_utr;Parent=Msa0526630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
