Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229840 | XP_003601544.1 | 96.330 | 327 | 12 | 0 | 1 | 327 | 1 | 327 | 0.0 | 648 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229840 | G7J8W4 | 96.330 | 327 | 12 | 0 | 1 | 327 | 1 | 327 | 0.0 | 648 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0047820 | Msa0229840 | 0.829797 | 4.210033e-55 | -8.615850e-47 |
| Msa0229840 | Msa0526630 | 0.842837 | 2.025537e-58 | -8.615850e-47 |
| Msa0229840 | Msa1101540 | 0.933918 | 9.010159e-96 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229840 | MtrunA17_Chr3g0120881 | 96.330 | 327 | 12 | 0 | 1 | 327 | 1 | 327 | 0.0 | 648 |
| Msa0229840 | MtrunA17_Chr5g0416081 | 34.052 | 232 | 148 | 3 | 1 | 228 | 3 | 233 | 1.20e-37 | 136 |
| Msa0229840 | MtrunA17_Chr7g0222351 | 24.199 | 281 | 187 | 9 | 5 | 265 | 1 | 275 | 1.27e-14 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229840 | AT1G04960.1 | 43.202 | 331 | 168 | 7 | 1 | 326 | 1 | 316 | 2.26e-85 | 260 |
| Msa0229840 | AT1G04960.2 | 42.173 | 313 | 161 | 7 | 19 | 326 | 36 | 333 | 3.21e-77 | 240 |
| Msa0229840 | AT1G27000.1 | 36.681 | 229 | 143 | 2 | 1 | 228 | 1 | 228 | 1.31e-42 | 149 |
| Msa0229840 | AT2G02730.3 | 32.751 | 229 | 143 | 3 | 1 | 225 | 1 | 222 | 7.05e-37 | 134 |
| Msa0229840 | AT2G02730.1 | 32.751 | 229 | 143 | 3 | 1 | 225 | 1 | 222 | 7.05e-37 | 134 |
| Msa0229840 | AT2G02730.2 | 32.751 | 229 | 143 | 3 | 1 | 225 | 1 | 222 | 7.05e-37 | 134 |
| Msa0229840 | AT1G24265.2 | 28.136 | 295 | 191 | 5 | 5 | 292 | 1 | 281 | 2.43e-26 | 107 |
| Msa0229840 | AT1G24265.1 | 28.136 | 295 | 191 | 5 | 5 | 292 | 1 | 281 | 2.43e-26 | 107 |
| Msa0229840 | AT1G24267.1 | 32.444 | 225 | 144 | 3 | 5 | 224 | 1 | 222 | 2.34e-25 | 104 |
| Msa0229840 | AT1G24267.2 | 32.743 | 226 | 143 | 4 | 5 | 224 | 1 | 223 | 5.26e-24 | 100 |
| Msa0229840 | AT1G24265.3 | 29.851 | 201 | 133 | 2 | 29 | 224 | 60 | 257 | 2.58e-21 | 94.0 |
Find 106 sgRNAs with CRISPR-Local
Find 473 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCAAATTTCTTTGTTATTA+TGG | 0.049863 | 2_2:-1652630 | None:intergenic |
| TAAAATACTTAAATTAAATT+TGG | 0.190476 | 2_2:-1653035 | None:intergenic |
| GGTGAGCTCTCAATGGTTTC+TGG | 0.202687 | 2_2:-1652608 | None:intergenic |
| CCAAATTTCTTTGTTATTAT+GGG | 0.232916 | 2_2:-1652629 | None:intergenic |
| GAGCAGGGGCATTACTGATT+TGG | 0.334527 | 2_2:+1652727 | Msa0229840:CDS |
| ACCTTAGGGGCTTTCTCCTC+AGG | 0.342947 | 2_2:-1652475 | None:intergenic |
| CCCATAATAACAAAGAAATT+TGG | 0.348898 | 2_2:+1652629 | Msa0229840:CDS |
| AGGCATTCCTTTCTCAGATT+GGG | 0.358700 | 2_2:+1650830 | Msa0229840:CDS |
| GCTAGTTCTGTTGTTATGAA+TGG | 0.364025 | 2_2:+1646613 | Msa0229840:CDS |
| ACATTACAAATTCAGGTATC+TGG | 0.370312 | 2_2:+1651156 | Msa0229840:CDS |
| CTGTTGGCATTTCTGTGAGC+AGG | 0.378616 | 2_2:+1652711 | Msa0229840:CDS |
| TTCTTTGAAGATTATAACTA+AGG | 0.386399 | 2_2:-1653118 | None:intergenic |
| AAGGCATTCCTTTCTCAGAT+TGG | 0.387289 | 2_2:+1650829 | Msa0229840:CDS |
| CAAGCTTGTTGAAGGCAATC+AGG | 0.400468 | 2_2:+1651013 | Msa0229840:CDS |
| GTTGGATGGTCTTGGCTTGG+AGG | 0.402244 | 2_2:+1648286 | Msa0229840:CDS |
| GGATGGTCTTGGCTTGGAGG+TGG | 0.409335 | 2_2:+1648289 | Msa0229840:CDS |
| ACCTTGTAAACTCCACCATT+TGG | 0.421144 | 2_2:-1651215 | None:intergenic |
| GCTTAAGTTAGTTGATGATC+AGG | 0.424364 | 2_2:+1646675 | Msa0229840:CDS |
| ATGCAGGACATTACAAATTC+AGG | 0.425759 | 2_2:+1651149 | Msa0229840:intron |
| ATAAAGAGGTTGGATGGTCT+TGG | 0.426125 | 2_2:+1648278 | Msa0229840:CDS |
| ATTCATTAACATGGAGATGA+TGG | 0.440009 | 2_2:-1652859 | None:intergenic |
| CACCGCTGTTATTGCCGCTC+AGG | 0.440113 | 2_2:+1646723 | Msa0229840:CDS |
| GACATTAACAATGGGCCAAA+TGG | 0.445188 | 2_2:+1651200 | Msa0229840:CDS |
| AATAACAGCGGTGTCATATC+CGG | 0.447170 | 2_2:-1646713 | None:intergenic |
| AGAAGAATTGTCATTATAGA+TGG | 0.450133 | 2_2:-1647705 | None:intergenic |
| GTATTACCTACTGCTGCAAT+AGG | 0.451703 | 2_2:+1647888 | Msa0229840:CDS |
| AGACTTATAAGATACTGAAT+TGG | 0.454666 | 2_2:-1653005 | None:intergenic |
| TTGCGGAGTTGTCCTTATCT+AGG | 0.468475 | 2_2:+1647675 | Msa0229840:CDS |
| GCCAAATGGTGGAGTTTACA+AGG | 0.472835 | 2_2:+1651214 | Msa0229840:CDS |
| TGTCAATGACATCAGACAAT+TGG | 0.481147 | 2_2:-1646639 | None:intergenic |
| TTTGGAACTATAAATGAGCT+AGG | 0.484947 | 2_2:+1653064 | Msa0229840:three_prime_UTR |
| GAGGTTGGATGGTCTTGGCT+TGG | 0.486148 | 2_2:+1648283 | Msa0229840:CDS |
| AGGGACTTGCAGAACTTACA+AGG | 0.490753 | 2_2:+1651483 | Msa0229840:intron |
| GATATTGTTACATGCGGTGG+AGG | 0.493713 | 2_2:+1647919 | Msa0229840:CDS |
| GAAAAGCTCAAGCTTGTTGA+AGG | 0.494401 | 2_2:+1651005 | Msa0229840:CDS |
| AAAGCATATAATAAAGAGGT+TGG | 0.496647 | 2_2:+1648268 | Msa0229840:CDS |
| ACTGCTGCAATAGGAGCTGC+TGG | 0.497908 | 2_2:+1647897 | Msa0229840:CDS |
| ATGAGAACCTTGGAGGAGGC+AGG | 0.500102 | 2_2:-1646467 | None:intergenic |
| TATTATGGGTGAGCTCTCAA+TGG | 0.500584 | 2_2:-1652615 | None:intergenic |
| TGATGTCATTGACAAGCTTA+AGG | 0.512815 | 2_2:+1646648 | Msa0229840:CDS |
| CTGCTCACAGAAATGCCAAC+AGG | 0.518943 | 2_2:-1652710 | None:intergenic |
| TCCAAGGTTCTCATCCTCGT+TGG | 0.519469 | 2_2:+1646476 | Msa0229840:CDS |
| TTTATTGAAGACATTAACAA+TGG | 0.522580 | 2_2:+1651191 | Msa0229840:CDS |
| AAATCAAATGATGTCTGAGC+TGG | 0.523352 | 2_2:+1650870 | Msa0229840:CDS |
| TGTTGGCATTTCTGTGAGCA+GGG | 0.525043 | 2_2:+1652712 | Msa0229840:CDS |
| ATGTAGGGCGGAACGGAAGT+AGG | 0.525891 | 2_2:-1646262 | None:intergenic |
| TGATCAGCCTGCATGATCAA+TGG | 0.528814 | 2_2:+1652777 | Msa0229840:three_prime_UTR |
| AACGAGGATGAGAACCTTGG+AGG | 0.530591 | 2_2:-1646474 | None:intergenic |
| CAGGTTAAGATTTCAACCTC+CGG | 0.532263 | 2_2:+1646694 | Msa0229840:CDS |
| GATCAGCTGTAATTTAAAGA+AGG | 0.534312 | 2_2:-1652759 | None:intergenic |
| CATCACACCCAATCTGAGAA+AGG | 0.536724 | 2_2:-1650837 | None:intergenic |
| TTATTGAAGACATTAACAAT+GGG | 0.537142 | 2_2:+1651192 | Msa0229840:CDS |
| ACCTGAGGAGAAAGCCCCTA+AGG | 0.541700 | 2_2:+1652474 | Msa0229840:CDS |
| GTTCTCATCCTCGTTGGAGC+CGG | 0.542164 | 2_2:+1646482 | Msa0229840:CDS |
| CATATAATAAAGAGGTTGGA+TGG | 0.545494 | 2_2:+1648272 | Msa0229840:CDS |
| ACTTCCGTTCCGCCCTACAT+AGG | 0.547830 | 2_2:+1646265 | Msa0229840:five_prime_UTR |
| TCTTCTTCTCCGATGTGAAG+CGG | 0.548247 | 2_2:-1646394 | None:intergenic |
| TTGGAACTATAAATGAGCTA+GGG | 0.551880 | 2_2:+1653065 | Msa0229840:three_prime_UTR |
| TGGAACTATAAATGAGCTAG+GGG | 0.559430 | 2_2:+1653066 | Msa0229840:three_prime_UTR |
| AGTTCTGTTGTTATGAATGG+TGG | 0.562314 | 2_2:+1646616 | Msa0229840:CDS |
| ATTAACAATGGGCCAAATGG+TGG | 0.565885 | 2_2:+1651203 | Msa0229840:CDS |
| ACTTTGAATCGCTTGGTCCG+TGG | 0.565947 | 2_2:+1646333 | Msa0229840:five_prime_UTR |
| ACCTACCATGGCTTTACAGA+TGG | 0.571433 | 2_2:+1646442 | Msa0229840:exon |
| ATTTCCTATGTAGGGCGGAA+CGG | 0.579173 | 2_2:-1646269 | None:intergenic |
| AGAACTTACAAGGGCACTTG+AGG | 0.581677 | 2_2:+1651493 | Msa0229840:CDS |
| CTGGATATTGTTACATGCGG+TGG | 0.587309 | 2_2:+1647916 | Msa0229840:CDS |
| GATGGCACCTGCCTCCTCCA+AGG | 0.588504 | 2_2:+1646460 | Msa0229840:CDS |
| CATACAGGTGAAGGAACTGA+AGG | 0.591549 | 2_2:+1650810 | Msa0229840:intron |
| GATGGTCTTAGACCTAGATA+AGG | 0.591561 | 2_2:-1647687 | None:intergenic |
| GTTGGCATTTCTGTGAGCAG+GGG | 0.594630 | 2_2:+1652713 | Msa0229840:CDS |
| TATAATGACAATTCTTCTAG+AGG | 0.596108 | 2_2:+1647710 | Msa0229840:CDS |
| GCAGCTCCTATTGCAGCAGT+AGG | 0.604279 | 2_2:-1647894 | None:intergenic |
| TGCATATTTCCTATGTAGGG+CGG | 0.604718 | 2_2:-1646274 | None:intergenic |
| GAGACACAAATTCATTAACA+TGG | 0.606227 | 2_2:-1652868 | None:intergenic |
| GAGGATGAGAACCTTGGAGG+AGG | 0.610275 | 2_2:-1646471 | None:intergenic |
| AAGTTAAAAGCAACTATGCA+AGG | 0.611533 | 2_2:-1646314 | None:intergenic |
| TCCAACGAGGATGAGAACCT+TGG | 0.617937 | 2_2:-1646477 | None:intergenic |
| ACTGAATCCATTGATCATGC+AGG | 0.618168 | 2_2:-1652784 | None:intergenic |
| TTACTAAATCAAGAGTACAC+AGG | 0.620214 | 2_2:+1652681 | Msa0229840:CDS |
| GTACACAGGGCATATCCTGT+TGG | 0.622120 | 2_2:+1652695 | Msa0229840:CDS |
| GTGTTCATTCCGCTTCACAT+CGG | 0.623766 | 2_2:+1646385 | Msa0229840:five_prime_UTR |
| AGAACTTACGATGGCACCTG+AGG | 0.627951 | 2_2:+1652459 | Msa0229840:CDS |
| AGGTGCCATCTGTAAAGCCA+TGG | 0.628164 | 2_2:-1646447 | None:intergenic |
| TACATCCGACAAGTATCCGA+AGG | 0.629437 | 2_2:-1652976 | None:intergenic |
| TTGAATCGCTTGGTCCGTGG+AGG | 0.630455 | 2_2:+1646336 | Msa0229840:five_prime_UTR |
| TACTAAATCAAGAGTACACA+GGG | 0.632279 | 2_2:+1652682 | Msa0229840:CDS |
| AACGTAACAACAACCTACCA+TGG | 0.645219 | 2_2:+1646430 | Msa0229840:exon |
| TGGTCCGTGGAGGACATAGA+CGG | 0.646769 | 2_2:+1646346 | Msa0229840:five_prime_UTR |
| GCAACTAGCACAAGAAATTG+CGG | 0.652131 | 2_2:+1647658 | Msa0229840:CDS |
| AACAGCGGTGTCATATCCGG+AGG | 0.656806 | 2_2:-1646710 | None:intergenic |
| GCCATCTGTAAAGCCATGGT+AGG | 0.668792 | 2_2:-1646443 | None:intergenic |
| CTGCTGGATATTGTTACATG+CGG | 0.670661 | 2_2:+1647913 | Msa0229840:CDS |
| ATTACCGTCTATGTCCTCCA+CGG | 0.677472 | 2_2:-1646350 | None:intergenic |
| GGGACTTGCAGAACTTACAA+GGG | 0.685663 | 2_2:+1651484 | Msa0229840:intron |
| TTAAAAGCAACTATGCAAGG+TGG | 0.694802 | 2_2:-1646311 | None:intergenic |
| ATATTGTTACATGCGGTGGA+GGG | 0.695562 | 2_2:+1647920 | Msa0229840:CDS |
| TACCTGAGCGGCAATAACAG+CGG | 0.697080 | 2_2:-1646725 | None:intergenic |
| CATAGTATACAAAACCTTAG+GGG | 0.697644 | 2_2:-1652488 | None:intergenic |
| GTGAAGCGGAATGAACACGA+GGG | 0.701523 | 2_2:-1646380 | None:intergenic |
| GAGACTTGAAGAACTTACGA+TGG | 0.705891 | 2_2:+1652450 | Msa0229840:intron |
| TGTGAAGCGGAATGAACACG+AGG | 0.706796 | 2_2:-1646381 | None:intergenic |
| TGAAGCGGAATGAACACGAG+GGG | 0.707645 | 2_2:-1646379 | None:intergenic |
| CAGAGTAGACAAAACCTTGG+GGG | 0.711472 | 2_2:-1651522 | None:intergenic |
| GAAGAATACCGGCTCCAACG+AGG | 0.738604 | 2_2:-1646490 | None:intergenic |
| GGAACTATAAATGAGCTAGG+GGG | 0.742735 | 2_2:+1653067 | Msa0229840:three_prime_UTR |
| GGAGAAGAAGAAATCGACGA+CGG | 0.745433 | 2_2:+1646406 | Msa0229840:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAATTATTTGAATAATAT+TGG | - | chr2_2:1647525-1647544 | None:intergenic | 10.0% |
| !!! | TAGAAATTTAAAATCATTAT+TGG | - | chr2_2:1649253-1649272 | None:intergenic | 10.0% |
| !!! | TTTATTGTTATTTAGTATTT+AGG | - | chr2_2:1649737-1649756 | None:intergenic | 10.0% |
| !!! | ATGAAATTACTTTTTTTTAT+AGG | - | chr2_2:1649792-1649811 | None:intergenic | 10.0% |
| !!! | TTTTAGTTATTTAGTTTTTA+GGG | - | chr2_2:1650156-1650175 | None:intergenic | 10.0% |
| !!! | ATTTTAGTTATTTAGTTTTT+AGG | - | chr2_2:1650157-1650176 | None:intergenic | 10.0% |
| !! | AAAAAGATGTATAATAAATA+GGG | + | chr2_2:1650418-1650437 | Msa0229840:intron | 10.0% |
| !!! | ATTTTGTTTATTTTTTAGAA+AGG | + | chr2_2:1651323-1651342 | Msa0229840:intron | 10.0% |
| !!! | GAGAAATTTTATTTTAATTA+TGG | - | chr2_2:1651799-1651818 | None:intergenic | 10.0% |
| !! | TGAACTTAAATTTATATTAA+CGG | + | chr2_2:1652009-1652028 | Msa0229840:intron | 10.0% |
| !! | TATATTGTTTGTTTGTAATT+CGG | + | chr2_2:1646826-1646845 | Msa0229840:intron | 15.0% |
| !!! | TATCTTTTATTTAGAATAAC+AGG | - | chr2_2:1648440-1648459 | None:intergenic | 15.0% |
| !! | ATAATTTATCAATTAGCATA+AGG | + | chr2_2:1648457-1648476 | Msa0229840:intron | 15.0% |
| !!! | GGTTTTAAATTTCATAATTA+GGG | - | chr2_2:1649771-1649790 | None:intergenic | 15.0% |
| !!! | AGGTTTTAAATTTCATAATT+AGG | - | chr2_2:1649772-1649791 | None:intergenic | 15.0% |
| !!! | TTTAGTTATTTAGTTTTTAG+GGG | - | chr2_2:1650155-1650174 | None:intergenic | 15.0% |
| !! | GAAAAAGATGTATAATAAAT+AGG | + | chr2_2:1650417-1650436 | Msa0229840:intron | 15.0% |
| !! | AAAAGATGTATAATAAATAG+GGG | + | chr2_2:1650419-1650438 | Msa0229840:intron | 15.0% |
| !! | AAAGAAATAATTAATGTAGT+TGG | + | chr2_2:1650451-1650470 | Msa0229840:intron | 15.0% |
| !!! | TTTAATAATACCATTTCTTT+TGG | - | chr2_2:1650665-1650684 | None:intergenic | 15.0% |
| !! | TATTAAACTTGAACTTTATT+TGG | + | chr2_2:1650678-1650697 | Msa0229840:intron | 15.0% |
| !! | ATTTACAACAAAAAAAATCA+GGG | - | chr2_2:1651126-1651145 | None:intergenic | 15.0% |
| !! | TATTTACAACAAAAAAAATC+AGG | - | chr2_2:1651127-1651146 | None:intergenic | 15.0% |
| !!! | AAACAATATTTTTTTCTTTC+CGG | - | chr2_2:1652081-1652100 | None:intergenic | 15.0% |
| !!! | TCAAAATTCTACATTCATTT+TGG | + | chr2_2:1646751-1646770 | Msa0229840:intron | 20.0% |
| !!! | TAGATGTGTTTTTCATTAAT+TGG | - | chr2_2:1646902-1646921 | None:intergenic | 20.0% |
| !! | ATTAATGAAAAACACATCTA+AGG | + | chr2_2:1646902-1646921 | Msa0229840:intron | 20.0% |
| !! | CATGAATTCAATTCTTATTA+AGG | - | chr2_2:1649098-1649117 | None:intergenic | 20.0% |
| !!! | ACATTATTGATTGAATATGT+TGG | - | chr2_2:1649161-1649180 | None:intergenic | 20.0% |
| !!! | AACTAAATGTTTTCATATGA+TGG | + | chr2_2:1649624-1649643 | Msa0229840:intron | 20.0% |
| !! | TAAAATAGGAACAATTCTTA+GGG | - | chr2_2:1649679-1649698 | None:intergenic | 20.0% |
| !! | TTAAAATAGGAACAATTCTT+AGG | - | chr2_2:1649680-1649699 | None:intergenic | 20.0% |
| !! | TACTATTGTAATCAATCATT+CGG | + | chr2_2:1650041-1650060 | Msa0229840:intron | 20.0% |
| !! | TAGTATCATTTAAGTAGATT+AGG | - | chr2_2:1650237-1650256 | None:intergenic | 20.0% |
| !!! | CAAGTTTAAAATTTTCATAC+AGG | + | chr2_2:1650795-1650814 | Msa0229840:intron | 20.0% |
| !! | AAAAAGGTGATTATTCAATT+TGG | - | chr2_2:1650946-1650965 | None:intergenic | 20.0% |
| !!! | TTCAAGTTAGAACATAAAAA+AGG | - | chr2_2:1650962-1650981 | None:intergenic | 20.0% |
| !! | TTTATTGAAGACATTAACAA+TGG | + | chr2_2:1651191-1651210 | Msa0229840:CDS | 20.0% |
| !! | TTATTGAAGACATTAACAAT+GGG | + | chr2_2:1651192-1651211 | Msa0229840:CDS | 20.0% |
| !! | AATTTCTCAAAATATAGTGT+AGG | - | chr2_2:1651633-1651652 | None:intergenic | 20.0% |
| !! | AGTACTATATGTATATATGT+TGG | + | chr2_2:1651657-1651676 | Msa0229840:intron | 20.0% |
| !! | ACTGAAGTAAAAAATTTACA+AGG | - | chr2_2:1652166-1652185 | None:intergenic | 20.0% |
| !!! | CCAAATTTCTTTGTTATTAT+GGG | - | chr2_2:1652632-1652651 | None:intergenic | 20.0% |
| !!! | ACCAAATTTCTTTGTTATTA+TGG | - | chr2_2:1652633-1652652 | None:intergenic | 20.0% |
| !!! | TTCTTTGAAGATTATAACTA+AGG | - | chr2_2:1653121-1653140 | None:intergenic | 20.0% |
| !! | TTTTGCATATTTCCTATGTA+GGG | - | chr2_2:1646280-1646299 | None:intergenic | 25.0% |
| ! | GAAAAATAAGAGAAGAATAC+CGG | - | chr2_2:1646504-1646523 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTGTTGCAATTTC+AGG | + | chr2_2:1646586-1646605 | Msa0229840:intron | 25.0% |
| ! | AGTTAGTTAGTTAATCAGTT+TGG | - | chr2_2:1646856-1646875 | None:intergenic | 25.0% |
| ! | TACCACTAGGAATAATATTT+CGG | + | chr2_2:1647044-1647063 | Msa0229840:intron | 25.0% |
| !! | AAGTTTCAATTTGATGATTG+CGG | + | chr2_2:1647090-1647109 | Msa0229840:intron | 25.0% |
| ! | CTTAGGATATTTATTCTGTT+TGG | + | chr2_2:1647393-1647412 | Msa0229840:intron | 25.0% |
| ! | ATCAATATAAGAAGAGTAGT+AGG | - | chr2_2:1647465-1647484 | None:intergenic | 25.0% |
| ! | AGAAGAATTGTCATTATAGA+TGG | - | chr2_2:1647708-1647727 | None:intergenic | 25.0% |
| ! | TATAATGACAATTCTTCTAG+AGG | + | chr2_2:1647710-1647729 | Msa0229840:CDS | 25.0% |
| !! | CGAAAAAGCATATAATAAAG+AGG | + | chr2_2:1648264-1648283 | Msa0229840:CDS | 25.0% |
| ! | AAAGCATATAATAAAGAGGT+TGG | + | chr2_2:1648268-1648287 | Msa0229840:CDS | 25.0% |
| ! | ATTTATCAATTAGCATAAGG+TGG | + | chr2_2:1648460-1648479 | Msa0229840:intron | 25.0% |
| !! | TCAATTTTCTTCTTTCACTT+AGG | + | chr2_2:1648551-1648570 | Msa0229840:intron | 25.0% |
| ! | TATGCAAAAAGAGATGTATA+TGG | - | chr2_2:1648676-1648695 | None:intergenic | 25.0% |
| !! | ATATACATCTCTTTTTGCAT+AGG | + | chr2_2:1648675-1648694 | Msa0229840:intron | 25.0% |
| ! | ATCTACTATCTAGCTATTAT+TGG | - | chr2_2:1648727-1648746 | None:intergenic | 25.0% |
| ! | CGTAATTAAATTTGAACATG+AGG | - | chr2_2:1649337-1649356 | None:intergenic | 25.0% |
| !!! | TTTTGAGATATTGAAAGAGA+CGG | - | chr2_2:1649419-1649438 | None:intergenic | 25.0% |
| ! | TTAATCATCAAAAAGTCATG+TGG | + | chr2_2:1649599-1649618 | Msa0229840:intron | 25.0% |
| !!! | AGAATTGTTCCTATTTTAAG+AGG | + | chr2_2:1649681-1649700 | Msa0229840:intron | 25.0% |
| !!! | GAATTGTTCCTATTTTAAGA+GGG | + | chr2_2:1649682-1649701 | Msa0229840:intron | 25.0% |
| ! | ATCATATTCCCTCTTAAAAT+AGG | - | chr2_2:1649693-1649712 | None:intergenic | 25.0% |
| ! | AAATTTCATAATTAGGGCTT+GGG | - | chr2_2:1649765-1649784 | None:intergenic | 25.0% |
| ! | TAAATTTCATAATTAGGGCT+TGG | - | chr2_2:1649766-1649785 | None:intergenic | 25.0% |
| ! | TGTCTAAATGATTAAACTGA+AGG | + | chr2_2:1650068-1650087 | Msa0229840:intron | 25.0% |
| !!! | AAACTGAAGGCTTTTTTTTA+TGG | + | chr2_2:1650081-1650100 | Msa0229840:intron | 25.0% |
| ! | TAAACTAATTCTCTCTCTTA+AGG | - | chr2_2:1650365-1650384 | None:intergenic | 25.0% |
| !!! | GTTTTCCATATGCTATTTAT+TGG | + | chr2_2:1650386-1650405 | Msa0229840:intron | 25.0% |
| ! | AATCACCAATAAATAGCATA+TGG | - | chr2_2:1650394-1650413 | None:intergenic | 25.0% |
| ! | GACTCAAAAAATTCTCAAAA+GGG | + | chr2_2:1650501-1650520 | Msa0229840:intron | 25.0% |
| !! | TCAAAAGGGTCTTATAATTA+GGG | + | chr2_2:1650515-1650534 | Msa0229840:intron | 25.0% |
| !! | CTTTATTTGGTCCTTAATAA+TGG | + | chr2_2:1650691-1650710 | Msa0229840:intron | 25.0% |
| ! | CAAAACATACTCCATTATTA+AGG | - | chr2_2:1650705-1650724 | None:intergenic | 25.0% |
| !! | TGTAAAAATTCATTTTGCCA+AGG | - | chr2_2:1650763-1650782 | None:intergenic | 25.0% |
| !! | TAAAATTTTCATACAGGTGA+AGG | + | chr2_2:1650801-1650820 | Msa0229840:intron | 25.0% |
| !!! | TTTTGTTGTAAATATCATGC+AGG | + | chr2_2:1651133-1651152 | Msa0229840:intron | 25.0% |
| !! | TTCTTATGCAAATTTTGAAC+AGG | + | chr2_2:1651463-1651482 | Msa0229840:intron | 25.0% |
| !! | TCTTATGCAAATTTTGAACA+GGG | + | chr2_2:1651464-1651483 | Msa0229840:intron | 25.0% |
| ! | TTTATTGCCTTTCAATTAAG+TGG | + | chr2_2:1651545-1651564 | Msa0229840:intron | 25.0% |
| ! | TAAGCTTCAAACATATCTAT+TGG | - | chr2_2:1651716-1651735 | None:intergenic | 25.0% |
| ! | ACAAAATGTACTATACATAG+TGG | + | chr2_2:1652208-1652227 | Msa0229840:intron | 25.0% |
| !! | TAGCCAGAAATTTTAAATAG+TGG | - | chr2_2:1652239-1652258 | None:intergenic | 25.0% |
| !! | ACATTTCTAAAAAAACCACA+GGG | - | chr2_2:1652270-1652289 | None:intergenic | 25.0% |
| !! | AACATTTCTAAAAAAACCAC+AGG | - | chr2_2:1652271-1652290 | None:intergenic | 25.0% |
| !! | AATATTGCTCTAGATTATCA+TGG | + | chr2_2:1652370-1652389 | Msa0229840:intron | 25.0% |
| ! | TTGAAATACCCATAAAAACA+AGG | - | chr2_2:1652428-1652447 | None:intergenic | 25.0% |
| ! | ACATAGTATACAAAACCTTA+GGG | - | chr2_2:1652492-1652511 | None:intergenic | 25.0% |
| !! | TTATTTCAAGTATGTGTTTC+AGG | + | chr2_2:1652562-1652581 | Msa0229840:intron | 25.0% |
| !! | TATTTCAAGTATGTGTTTCA+GGG | + | chr2_2:1652563-1652582 | Msa0229840:intron | 25.0% |
| ! | CCCATAATAACAAAGAAATT+TGG | + | chr2_2:1652629-1652648 | Msa0229840:CDS | 25.0% |
| !! | ATTGTCAAGTATTTTTCACA+TGG | + | chr2_2:1652941-1652960 | Msa0229840:three_prime_UTR | 25.0% |
| !! | ATGGATTTGTATTTTTCCTT+CGG | + | chr2_2:1652960-1652979 | Msa0229840:three_prime_UTR | 25.0% |
| ! | AGACTTATAAGATACTGAAT+TGG | - | chr2_2:1653008-1653027 | None:intergenic | 25.0% |
| !!! | TTAAGTATTTTAGCAACGTT+TGG | + | chr2_2:1653046-1653065 | Msa0229840:three_prime_UTR | 25.0% |
| ! | ATAGAATTGATGAAAAACTG+AGG | + | chr2_2:1653091-1653110 | Msa0229840:three_prime_UTR | 25.0% |
| ! | CTTTTGCATATTTCCTATGT+AGG | - | chr2_2:1646281-1646300 | None:intergenic | 30.0% |
| AAGTTAAAAGCAACTATGCA+AGG | - | chr2_2:1646317-1646336 | None:intergenic | 30.0% | |
| ACAATAATTCAAAACCAACG+AGG | - | chr2_2:1646560-1646579 | None:intergenic | 30.0% | |
| !!! | TTTTGTTGCAATTTCAGGTT+TGG | + | chr2_2:1646591-1646610 | Msa0229840:intron | 30.0% |
| !! | GAATTTTGAAAATACCTGAG+CGG | - | chr2_2:1646740-1646759 | None:intergenic | 30.0% |
| !!! | ATTTTGGTTCCTAAATGTGT+TGG | + | chr2_2:1646767-1646786 | Msa0229840:intron | 30.0% |
| TTGTGATTTCGATACATTCA+GGG | - | chr2_2:1646793-1646812 | None:intergenic | 30.0% | |
| TTTGTGATTTCGATACATTC+AGG | - | chr2_2:1646794-1646813 | None:intergenic | 30.0% | |
| GAAATCACAAAAACATCGTT+GGG | + | chr2_2:1646803-1646822 | Msa0229840:intron | 30.0% | |
| AAACACATCTAAGGATCAAA+CGG | + | chr2_2:1646911-1646930 | Msa0229840:intron | 30.0% | |
| GTGTATATCATATTACCACT+AGG | + | chr2_2:1647031-1647050 | Msa0229840:intron | 30.0% | |
| ACCACTAGGAATAATATTTC+GGG | + | chr2_2:1647045-1647064 | Msa0229840:intron | 30.0% | |
| ! | AGTTTCAATTTGATGATTGC+GGG | + | chr2_2:1647091-1647110 | Msa0229840:intron | 30.0% |
| ! | TTACAAAGGTGTATTGAAGT+AGG | + | chr2_2:1647155-1647174 | Msa0229840:intron | 30.0% |
| ! | AAAATTACCTCCTTTTAGCA+TGG | + | chr2_2:1647268-1647287 | Msa0229840:intron | 30.0% |
| ATAAAGAAACAAAGGAGAAG+AGG | + | chr2_2:1647321-1647340 | Msa0229840:intron | 30.0% | |
| TAAAGAAACAAAGGAGAAGA+GGG | + | chr2_2:1647322-1647341 | Msa0229840:intron | 30.0% | |
| TATAAGAAGAGTAGTAGGTT+TGG | - | chr2_2:1647460-1647479 | None:intergenic | 30.0% | |
| TTTCTTCACAATGAACTTGT+TGG | + | chr2_2:1647598-1647617 | Msa0229840:intron | 30.0% | |
| ! | GCAAATGTCTATTTAACTTC+AGG | + | chr2_2:1647631-1647650 | Msa0229840:intron | 30.0% |
| ! | TGTCTATTTAACTTCAGGTT+CGG | + | chr2_2:1647636-1647655 | Msa0229840:intron | 30.0% |
| ! | TTTTCCTTTCTTTCTTCTGA+TGG | + | chr2_2:1647791-1647810 | Msa0229840:intron | 30.0% |
| TATACCATCAGAAGAAAGAA+AGG | - | chr2_2:1647798-1647817 | None:intergenic | 30.0% | |
| !! | TTGAGTTGAGCTGTAATAAT+TGG | + | chr2_2:1647825-1647844 | Msa0229840:intron | 30.0% |
| ! | AATTGGCCTATGTTAACATT+TGG | + | chr2_2:1647842-1647861 | Msa0229840:intron | 30.0% |
| ! | ATTGGCCTATGTTAACATTT+GGG | + | chr2_2:1647843-1647862 | Msa0229840:intron | 30.0% |
| ATTTGTGAAGAAAAGAAGCT+GGG | - | chr2_2:1647957-1647976 | None:intergenic | 30.0% | |
| TTACATCTCACATCATATTC+TGG | - | chr2_2:1647995-1648014 | None:intergenic | 30.0% | |
| ! | TAGCAGTAAGTAGCTTTTAT+TGG | + | chr2_2:1648150-1648169 | Msa0229840:intron | 30.0% |
| CATATAATAAAGAGGTTGGA+TGG | + | chr2_2:1648272-1648291 | Msa0229840:CDS | 30.0% | |
| GATGTCTTTAACTAGACTAA+TGG | - | chr2_2:1648371-1648390 | None:intergenic | 30.0% | |
| AGTAATTCACATCAACAATG+TGG | + | chr2_2:1648393-1648412 | Msa0229840:intron | 30.0% | |
| ! | TCTTCTTTCACTTAGGATTT+TGG | + | chr2_2:1648558-1648577 | Msa0229840:intron | 30.0% |
| ! | CTTCTTTCACTTAGGATTTT+GGG | + | chr2_2:1648559-1648578 | Msa0229840:intron | 30.0% |
| ! | AATCAAGGTTAGTTGATCAA+GGG | - | chr2_2:1648641-1648660 | None:intergenic | 30.0% |
| ! | AAATCAAGGTTAGTTGATCA+AGG | - | chr2_2:1648642-1648661 | None:intergenic | 30.0% |
| ! | TCAACTAACCTTGATTTTTG+TGG | + | chr2_2:1648645-1648664 | Msa0229840:intron | 30.0% |
| ! | CAACTAACCTTGATTTTTGT+GGG | + | chr2_2:1648646-1648665 | Msa0229840:intron | 30.0% |
| TATAAGTCATTACCAGTCAA+AGG | - | chr2_2:1649122-1649141 | None:intergenic | 30.0% | |
| !!! | AGCTTGAACTTTTTTAAGAG+TGG | - | chr2_2:1649218-1649237 | None:intergenic | 30.0% |
| ACTCTTAAAAAAGTTCAAGC+TGG | + | chr2_2:1649217-1649236 | Msa0229840:intron | 30.0% | |
| ! | TAAAGAAGCATGTTTACCAT+GGG | - | chr2_2:1649518-1649537 | None:intergenic | 30.0% |
| ! | TTAAAGAAGCATGTTTACCA+TGG | - | chr2_2:1649519-1649538 | None:intergenic | 30.0% |
| CCAATTTACATCATATTCCT+CGG | + | chr2_2:1649826-1649845 | Msa0229840:intron | 30.0% | |
| CAATTTACATCATATTCCTC+GGG | + | chr2_2:1649827-1649846 | Msa0229840:intron | 30.0% | |
| AGAGTCAAGGAAAATTCAAA+TGG | + | chr2_2:1649864-1649883 | Msa0229840:intron | 30.0% | |
| CTATGAATACCAAATTGATG+TGG | + | chr2_2:1649924-1649943 | Msa0229840:intron | 30.0% | |
| AATACCAAATTGATGTGGAA+TGG | + | chr2_2:1649929-1649948 | Msa0229840:intron | 30.0% | |
| TTAAAATAGGACCTATTAGG+GGG | - | chr2_2:1650124-1650143 | None:intergenic | 30.0% | |
| CTTAAAATAGGACCTATTAG+GGG | - | chr2_2:1650125-1650144 | None:intergenic | 30.0% | |
| GCTTAAAATAGGACCTATTA+GGG | - | chr2_2:1650126-1650145 | None:intergenic | 30.0% | |
| AGCTTAAAATAGGACCTATT+AGG | - | chr2_2:1650127-1650146 | None:intergenic | 30.0% | |
| AATCACGGGAATTAAGAAAT+TGG | + | chr2_2:1650290-1650309 | Msa0229840:intron | 30.0% | |
| AATGTAGTTGGAAATAGCAA+AGG | + | chr2_2:1650463-1650482 | Msa0229840:intron | 30.0% | |
| ATGTAGTTGGAAATAGCAAA+GGG | + | chr2_2:1650464-1650483 | Msa0229840:intron | 30.0% | |
| GGACTCAAAAAATTCTCAAA+AGG | + | chr2_2:1650500-1650519 | Msa0229840:intron | 30.0% | |
| ! | CTCAAAAGGGTCTTATAATT+AGG | + | chr2_2:1650514-1650533 | Msa0229840:intron | 30.0% |
| !! | TACCATTTCTTTTGGAAACA+CGG | - | chr2_2:1650657-1650676 | None:intergenic | 30.0% |
| TGATTATTCAATTTGGCTAG+AGG | - | chr2_2:1650939-1650958 | None:intergenic | 30.0% | |
| AATCAATCACTTTACTTGAC+AGG | + | chr2_2:1650980-1650999 | Msa0229840:intron | 30.0% | |
| ! | TAAGTTTAACTTTGCAGACA+TGG | + | chr2_2:1651046-1651065 | Msa0229840:intron | 30.0% |
| ! | AAGTTTAACTTTGCAGACAT+GGG | + | chr2_2:1651047-1651066 | Msa0229840:intron | 30.0% |
| ACATTACAAATTCAGGTATC+TGG | + | chr2_2:1651156-1651175 | Msa0229840:CDS | 30.0% | |
| TGTGTATAAGTAGTCACTAA+AGG | + | chr2_2:1651300-1651319 | Msa0229840:intron | 30.0% | |
| TATATTGCTCTGCATTATCA+TGG | + | chr2_2:1651427-1651446 | Msa0229840:intron | 30.0% | |
| ! | ACACCATTGTTGATCTTTTA+AGG | + | chr2_2:1651878-1651897 | Msa0229840:intron | 30.0% |
| ! | CACCATTGTTGATCTTTTAA+GGG | + | chr2_2:1651879-1651898 | Msa0229840:intron | 30.0% |
| AACCCTTAAAAGATCAACAA+TGG | - | chr2_2:1651884-1651903 | None:intergenic | 30.0% | |
| !! | TTTTAAGGGTTAAACTCTCA+AGG | + | chr2_2:1651893-1651912 | Msa0229840:intron | 30.0% |
| TTTAAGGGTTAAACTCTCAA+GGG | + | chr2_2:1651894-1651913 | Msa0229840:intron | 30.0% | |
| ! | CCAGAAATTTTAAATAGTGG+AGG | - | chr2_2:1652236-1652255 | None:intergenic | 30.0% |
| ! | CCTCCACTATTTAAAATTTC+TGG | + | chr2_2:1652233-1652252 | Msa0229840:intron | 30.0% |
| !!! | AATACTGAGCCTTGTTTTTA+TGG | + | chr2_2:1652416-1652435 | Msa0229840:intron | 30.0% |
| !!! | ATACTGAGCCTTGTTTTTAT+GGG | + | chr2_2:1652417-1652436 | Msa0229840:intron | 30.0% |
| CATAGTATACAAAACCTTAG+GGG | - | chr2_2:1652491-1652510 | None:intergenic | 30.0% | |
| GACATAGTATACAAAACCTT+AGG | - | chr2_2:1652493-1652512 | None:intergenic | 30.0% | |
| ! | ATTTCAAGTATGTGTTTCAG+GGG | + | chr2_2:1652564-1652583 | Msa0229840:intron | 30.0% |
| ! | TTACTAAATCAAGAGTACAC+AGG | + | chr2_2:1652681-1652700 | Msa0229840:CDS | 30.0% |
| ! | TACTAAATCAAGAGTACACA+GGG | + | chr2_2:1652682-1652701 | Msa0229840:CDS | 30.0% |
| GATCAGCTGTAATTTAAAGA+AGG | - | chr2_2:1652762-1652781 | None:intergenic | 30.0% | |
| !!! | CAGTGACAGTACTTTTTTTA+CGG | + | chr2_2:1652803-1652822 | Msa0229840:three_prime_UTR | 30.0% |
| ATTCATTAACATGGAGATGA+TGG | - | chr2_2:1652862-1652881 | None:intergenic | 30.0% | |
| GAGACACAAATTCATTAACA+TGG | - | chr2_2:1652871-1652890 | None:intergenic | 30.0% | |
| ! | TTTGGAACTATAAATGAGCT+AGG | + | chr2_2:1653064-1653083 | Msa0229840:three_prime_UTR | 30.0% |
| TTGGAACTATAAATGAGCTA+GGG | + | chr2_2:1653065-1653084 | Msa0229840:three_prime_UTR | 30.0% | |
| TTAAAAGCAACTATGCAAGG+TGG | - | chr2_2:1646314-1646333 | None:intergenic | 35.0% | |
| !!! | GCTTTTAACTTTGAATCGCT+TGG | + | chr2_2:1646326-1646345 | Msa0229840:five_prime_UTR | 35.0% |
| !! | GCTAGTTCTGTTGTTATGAA+TGG | + | chr2_2:1646613-1646632 | Msa0229840:CDS | 35.0% |
| AGTTCTGTTGTTATGAATGG+TGG | + | chr2_2:1646616-1646635 | Msa0229840:CDS | 35.0% | |
| TGTCAATGACATCAGACAAT+TGG | - | chr2_2:1646642-1646661 | None:intergenic | 35.0% | |
| TGATGTCATTGACAAGCTTA+AGG | + | chr2_2:1646648-1646667 | Msa0229840:CDS | 35.0% | |
| !! | GCTTAAGTTAGTTGATGATC+AGG | + | chr2_2:1646675-1646694 | Msa0229840:CDS | 35.0% |
| CGAAATCACAAAAACATCGT+TGG | + | chr2_2:1646802-1646821 | Msa0229840:intron | 35.0% | |
| ACCCGAAATATTATTCCTAG+TGG | - | chr2_2:1647049-1647068 | None:intergenic | 35.0% | |
| ACTTAGTAAGTCCACAGATA+TGG | + | chr2_2:1647132-1647151 | Msa0229840:intron | 35.0% | |
| AATGTAGAGAGTTTGAACCA+TGG | + | chr2_2:1647187-1647206 | Msa0229840:intron | 35.0% | |
| ATGTAGAGAGTTTGAACCAT+GGG | + | chr2_2:1647188-1647207 | Msa0229840:intron | 35.0% | |
| TATCCATCCACTAATCATCT+GGG | - | chr2_2:1647304-1647323 | None:intergenic | 35.0% | |
| TTATCCATCCACTAATCATC+TGG | - | chr2_2:1647305-1647324 | None:intergenic | 35.0% | |
| GTGGATGGATAAAGAAACAA+AGG | + | chr2_2:1647313-1647332 | Msa0229840:intron | 35.0% | |
| AAAGAAACAAAGGAGAAGAG+GGG | + | chr2_2:1647323-1647342 | Msa0229840:intron | 35.0% | |
| GAGTGATGCAAGTATAAATC+AGG | + | chr2_2:1647358-1647377 | Msa0229840:intron | 35.0% | |
| GTTTGTAGAAGAAGTTGTGA+TGG | - | chr2_2:1647745-1647764 | None:intergenic | 35.0% | |
| CATTTGTGAAGAAAAGAAGC+TGG | - | chr2_2:1647958-1647977 | None:intergenic | 35.0% | |
| TTACCACTATTGTGCAGAAT+TGG | + | chr2_2:1648036-1648055 | Msa0229840:intron | 35.0% | |
| TCAAGGGAAAAGTGGTAATA+AGG | - | chr2_2:1648625-1648644 | None:intergenic | 35.0% | |
| TTAGTTGATCAAGGGAAAAG+TGG | - | chr2_2:1648633-1648652 | None:intergenic | 35.0% | |
| ! | ATTCTGACACAATTTTTCCC+TGG | - | chr2_2:1648790-1648809 | None:intergenic | 35.0% |
| ! | TCGAAGTGTTTACATCACAA+AGG | - | chr2_2:1648872-1648891 | None:intergenic | 35.0% |
| ! | AAGCTTGTTTGCTAGTATGT+TGG | + | chr2_2:1648895-1648914 | Msa0229840:intron | 35.0% |
| TTGGATGTAGGCTAACATTA+AGG | - | chr2_2:1649039-1649058 | None:intergenic | 35.0% | |
| AAGTGATAGGATAGTGATGT+TGG | - | chr2_2:1649058-1649077 | None:intergenic | 35.0% | |
| GACTACTACAAGAAAGTGAT+AGG | - | chr2_2:1649071-1649090 | None:intergenic | 35.0% | |
| TTGAATTCATGACCTTTGAC+TGG | + | chr2_2:1649107-1649126 | Msa0229840:intron | 35.0% | |
| !! | ATTTCTAGCATATCCTGTCA+AGG | + | chr2_2:1649266-1649285 | Msa0229840:intron | 35.0% |
| ACGAAATGCAAAACCTTCTT+GGG | - | chr2_2:1649457-1649476 | None:intergenic | 35.0% | |
| AACGAAATGCAAAACCTTCT+TGG | - | chr2_2:1649458-1649477 | None:intergenic | 35.0% | |
| TCTTTAAGTGCAAATTGCTG+TGG | + | chr2_2:1649532-1649551 | Msa0229840:intron | 35.0% | |
| CCGAGGAATATGATGTAAAT+TGG | - | chr2_2:1649829-1649848 | None:intergenic | 35.0% | |
| ! | TTGAATTTTCCTTGACTCTC+TGG | - | chr2_2:1649863-1649882 | None:intergenic | 35.0% |
| ATGATCTTTACTTCACTCAC+AGG | - | chr2_2:1649898-1649917 | None:intergenic | 35.0% | |
| CAAAAGGATACGCTTATTGA+GGG | - | chr2_2:1649964-1649983 | None:intergenic | 35.0% | |
| AGTTTGAGTCAAAGAAGCAA+CGG | - | chr2_2:1649999-1650018 | None:intergenic | 35.0% | |
| TATAAAGCTAACCCCCTAAT+AGG | + | chr2_2:1650110-1650129 | Msa0229840:intron | 35.0% | |
| AGGGGTTTCAAGCTTAAAAT+AGG | - | chr2_2:1650137-1650156 | None:intergenic | 35.0% | |
| GCAAAAGGGTCCTATAATTA+GGG | - | chr2_2:1650267-1650286 | None:intergenic | 35.0% | |
| AGCAAAAGGGTCCTATAATT+AGG | - | chr2_2:1650268-1650287 | None:intergenic | 35.0% | |
| !! | TTCCCGTGATTTTAGCAAAA+GGG | - | chr2_2:1650281-1650300 | None:intergenic | 35.0% |
| !! | ATTCCCGTGATTTTAGCAAA+AGG | - | chr2_2:1650282-1650301 | None:intergenic | 35.0% |
| TGTAGTTGGAAATAGCAAAG+GGG | + | chr2_2:1650465-1650484 | Msa0229840:intron | 35.0% | |
| ! | AGCAAAGGGGTCTTATAAAA+AGG | + | chr2_2:1650478-1650497 | Msa0229840:intron | 35.0% |
| ! | GCAAAGGGGTCTTATAAAAA+GGG | + | chr2_2:1650479-1650498 | Msa0229840:intron | 35.0% |
| ! | AAGGGTCTTATAATTAGGGA+CGG | + | chr2_2:1650519-1650538 | Msa0229840:intron | 35.0% |
| TACCGTGTTTCCAAAAGAAA+TGG | + | chr2_2:1650652-1650671 | Msa0229840:intron | 35.0% | |
| ! | TTTGCAGTTTGCTTAATGCT+AGG | + | chr2_2:1650735-1650754 | Msa0229840:intron | 35.0% |
| AAATCAAATGATGTCTGAGC+TGG | + | chr2_2:1650870-1650889 | Msa0229840:CDS | 35.0% | |
| ATGCAGGACATTACAAATTC+AGG | + | chr2_2:1651149-1651168 | Msa0229840:intron | 35.0% | |
| CTTATACACAACTAGATGAG+TGG | - | chr2_2:1651271-1651290 | None:intergenic | 35.0% | |
| AACAGAGTAGACAAAACCTT+GGG | - | chr2_2:1651527-1651546 | None:intergenic | 35.0% | |
| AAACAGAGTAGACAAAACCT+TGG | - | chr2_2:1651528-1651547 | None:intergenic | 35.0% | |
| TCGAGAACCACTTAATTGAA+AGG | - | chr2_2:1651555-1651574 | None:intergenic | 35.0% | |
| TATGTTGGTATTTGACCAAG+TGG | + | chr2_2:1651672-1651691 | Msa0229840:intron | 35.0% | |
| ATTGGATGATAGATGAGTGT+AGG | - | chr2_2:1651698-1651717 | None:intergenic | 35.0% | |
| ! | GATTTTGTCTCACTTGTAGT+TGG | + | chr2_2:1651758-1651777 | Msa0229840:intron | 35.0% |
| ! | ACTCTAATTTGCAAGTCTAC+TGG | - | chr2_2:1652055-1652074 | None:intergenic | 35.0% |
| ACTTGCAAATTAGAGTTTGC+CGG | + | chr2_2:1652059-1652078 | Msa0229840:intron | 35.0% | |
| AAAAAATCGCAGGCACAAAA+GGG | + | chr2_2:1652832-1652851 | Msa0229840:three_prime_UTR | 35.0% | |
| ! | TTTTTCCTTCGGATACTTGT+CGG | + | chr2_2:1652971-1652990 | Msa0229840:three_prime_UTR | 35.0% |
| TGGAACTATAAATGAGCTAG+GGG | + | chr2_2:1653066-1653085 | Msa0229840:three_prime_UTR | 35.0% | |
| TGCATATTTCCTATGTAGGG+CGG | - | chr2_2:1646277-1646296 | None:intergenic | 40.0% | |
| AACGTAACAACAACCTACCA+TGG | + | chr2_2:1646430-1646449 | Msa0229840:exon | 40.0% | |
| CAGGTTAAGATTTCAACCTC+CGG | + | chr2_2:1646694-1646713 | Msa0229840:CDS | 40.0% | |
| !! | AATAACAGCGGTGTCATATC+CGG | - | chr2_2:1646716-1646735 | None:intergenic | 40.0% |
| GACACATTCAACGATGAAAC+TGG | + | chr2_2:1646987-1647006 | Msa0229840:intron | 40.0% | |
| GTCCACAGATATGGTTACAA+AGG | + | chr2_2:1647141-1647160 | Msa0229840:intron | 40.0% | |
| CACCTTTGTAACCATATCTG+TGG | - | chr2_2:1647146-1647165 | None:intergenic | 40.0% | |
| TGTAGAGAGTTTGAACCATG+GGG | + | chr2_2:1647189-1647208 | Msa0229840:intron | 40.0% | |
| GGGAGTCTTGATGAGAATAT+GGG | + | chr2_2:1647209-1647228 | Msa0229840:intron | 40.0% | |
| AGTCTTGATGAGAATATGGG+AGG | + | chr2_2:1647212-1647231 | Msa0229840:intron | 40.0% | |
| GTCTTGATGAGAATATGGGA+GGG | + | chr2_2:1647213-1647232 | Msa0229840:intron | 40.0% | |
| ATCCAGGTAGTTAGATGATC+AGG | + | chr2_2:1647245-1647264 | Msa0229840:intron | 40.0% | |
| TTCCTGATCATCTAACTACC+TGG | - | chr2_2:1647250-1647269 | None:intergenic | 40.0% | |
| TCAGGTCACTGAAATTGCTT+AGG | + | chr2_2:1647376-1647395 | Msa0229840:intron | 40.0% | |
| GCAACTAGCACAAGAAATTG+CGG | + | chr2_2:1647658-1647677 | Msa0229840:CDS | 40.0% | |
| ! | GATGGTCTTAGACCTAGATA+AGG | - | chr2_2:1647690-1647709 | None:intergenic | 40.0% |
| TATGTTAACATTTGGGCGCA+GGG | + | chr2_2:1647850-1647869 | Msa0229840:intron | 40.0% | |
| GTATTACCTACTGCTGCAAT+AGG | + | chr2_2:1647888-1647907 | Msa0229840:CDS | 40.0% | |
| CTGCTGGATATTGTTACATG+CGG | + | chr2_2:1647913-1647932 | Msa0229840:CDS | 40.0% | |
| ATATTGTTACATGCGGTGGA+GGG | + | chr2_2:1647920-1647939 | Msa0229840:CDS | 40.0% | |
| TGACCAATTCTGCACAATAG+TGG | - | chr2_2:1648042-1648061 | None:intergenic | 40.0% | |
| ATAAAGAGGTTGGATGGTCT+TGG | + | chr2_2:1648278-1648297 | Msa0229840:CDS | 40.0% | |
| TCAATTAGCATAAGGTGGAG+AGG | + | chr2_2:1648465-1648484 | Msa0229840:intron | 40.0% | |
| CAATTAGCATAAGGTGGAGA+GGG | + | chr2_2:1648466-1648485 | Msa0229840:intron | 40.0% | |
| !! | TAGCACCGAAACAAGCTTTT+AGG | + | chr2_2:1648821-1648840 | Msa0229840:intron | 40.0% |
| ! | GCTTGCCTAAAAGCTTGTTT+CGG | - | chr2_2:1648829-1648848 | None:intergenic | 40.0% |
| GGTCAACCATGATAATTCTG+TGG | - | chr2_2:1648851-1648870 | None:intergenic | 40.0% | |
| AGGAGAGGAATTGTGATAGT+GGG | - | chr2_2:1648970-1648989 | None:intergenic | 40.0% | |
| TAGGAGAGGAATTGTGATAG+TGG | - | chr2_2:1648971-1648990 | None:intergenic | 40.0% | |
| CAACTTTCTTAGGTAGTGCT+AGG | - | chr2_2:1648990-1649009 | None:intergenic | 40.0% | |
| CCTAGAAAGGCAACTTTCTT+AGG | - | chr2_2:1649000-1649019 | None:intergenic | 40.0% | |
| CCTAAGAAAGTTGCCTTTCT+AGG | + | chr2_2:1648997-1649016 | Msa0229840:intron | 40.0% | |
| GGCTAACATTAAGGCAATGT+GGG | - | chr2_2:1649030-1649049 | None:intergenic | 40.0% | |
| AGGCTAACATTAAGGCAATG+TGG | - | chr2_2:1649031-1649050 | None:intergenic | 40.0% | |
| AGGATAGTGATGTTGGATGT+AGG | - | chr2_2:1649051-1649070 | None:intergenic | 40.0% | |
| CACACTGAAACACGAACAAA+GGG | - | chr2_2:1649188-1649207 | None:intergenic | 40.0% | |
| ACACACTGAAACACGAACAA+AGG | - | chr2_2:1649189-1649208 | None:intergenic | 40.0% | |
| GATATTGAAAGAGACGGTCT+GGG | - | chr2_2:1649413-1649432 | None:intergenic | 40.0% | |
| AGATATTGAAAGAGACGGTC+TGG | - | chr2_2:1649414-1649433 | None:intergenic | 40.0% | |
| ! | CCTTTGCTATGTCTACAAGT+AGG | - | chr2_2:1649650-1649669 | None:intergenic | 40.0% |
| CCTACTTGTAGACATAGCAA+AGG | + | chr2_2:1649647-1649666 | Msa0229840:intron | 40.0% | |
| ! | AATTTTCCTTGACTCTCTGG+AGG | - | chr2_2:1649860-1649879 | None:intergenic | 40.0% |
| CTCTCCATTCCACATCAATT+TGG | - | chr2_2:1649936-1649955 | None:intergenic | 40.0% | |
| CAAATTGATGTGGAATGGAG+AGG | + | chr2_2:1649934-1649953 | Msa0229840:intron | 40.0% | |
| CCAAAAGGATACGCTTATTG+AGG | - | chr2_2:1649965-1649984 | None:intergenic | 40.0% | |
| ! | CCTCAATAAGCGTATCCTTT+TGG | + | chr2_2:1649962-1649981 | Msa0229840:intron | 40.0% |
| AAGGGTCCTATAATTAGGGA+CGG | - | chr2_2:1650263-1650282 | None:intergenic | 40.0% | |
| ! | GGACCCTTTTGCTAAAATCA+CGG | + | chr2_2:1650275-1650294 | Msa0229840:intron | 40.0% |
| ! | GACCCTTTTGCTAAAATCAC+GGG | + | chr2_2:1650276-1650295 | Msa0229840:intron | 40.0% |
| ! | AAGGCATTCCTTTCTCAGAT+TGG | + | chr2_2:1650829-1650848 | Msa0229840:CDS | 40.0% |
| AGGCATTCCTTTCTCAGATT+GGG | + | chr2_2:1650830-1650849 | Msa0229840:CDS | 40.0% | |
| !! | GAAAAGCTCAAGCTTGTTGA+AGG | + | chr2_2:1651005-1651024 | Msa0229840:CDS | 40.0% |
| GACATTAACAATGGGCCAAA+TGG | + | chr2_2:1651200-1651219 | Msa0229840:CDS | 40.0% | |
| ATTAACAATGGGCCAAATGG+TGG | + | chr2_2:1651203-1651222 | Msa0229840:CDS | 40.0% | |
| ACCTTGTAAACTCCACCATT+TGG | - | chr2_2:1651218-1651237 | None:intergenic | 40.0% | |
| ATACACAACTAGATGAGTGG+AGG | - | chr2_2:1651268-1651287 | None:intergenic | 40.0% | |
| ACAGAGTAGACAAAACCTTG+GGG | - | chr2_2:1651526-1651545 | None:intergenic | 40.0% | |
| AAACTACAAGTGAGTGAACG+AGG | - | chr2_2:1651858-1651877 | None:intergenic | 40.0% | |
| TCACACACTTTAGCTACGAA+GGG | - | chr2_2:1652127-1652146 | None:intergenic | 40.0% | |
| TTCACACACTTTAGCTACGA+AGG | - | chr2_2:1652128-1652147 | None:intergenic | 40.0% | |
| GAGACTTGAAGAACTTACGA+TGG | + | chr2_2:1652450-1652469 | Msa0229840:intron | 40.0% | |
| TACTTGAAATAAGTCACCGC+TGG | - | chr2_2:1652554-1652573 | None:intergenic | 40.0% | |
| TATTATGGGTGAGCTCTCAA+TGG | - | chr2_2:1652618-1652637 | None:intergenic | 40.0% | |
| ACTGAATCCATTGATCATGC+AGG | - | chr2_2:1652787-1652806 | None:intergenic | 40.0% | |
| ! | CTTTTGTGCCTGCGATTTTT+TGG | - | chr2_2:1652833-1652852 | None:intergenic | 40.0% |
| CAAAAAATCGCAGGCACAAA+AGG | + | chr2_2:1652831-1652850 | Msa0229840:three_prime_UTR | 40.0% | |
| GGAACTATAAATGAGCTAGG+GGG | + | chr2_2:1653067-1653086 | Msa0229840:three_prime_UTR | 40.0% | |
| ATTTCCTATGTAGGGCGGAA+CGG | - | chr2_2:1646272-1646291 | None:intergenic | 45.0% | |
| ATTACCGTCTATGTCCTCCA+CGG | - | chr2_2:1646353-1646372 | None:intergenic | 45.0% | |
| GTGTTCATTCCGCTTCACAT+CGG | + | chr2_2:1646385-1646404 | Msa0229840:five_prime_UTR | 45.0% | |
| TCTTCTTCTCCGATGTGAAG+CGG | - | chr2_2:1646397-1646416 | None:intergenic | 45.0% | |
| GGAGAAGAAGAAATCGACGA+CGG | + | chr2_2:1646406-1646425 | Msa0229840:five_prime_UTR | 45.0% | |
| ! | ACCTACCATGGCTTTACAGA+TGG | + | chr2_2:1646442-1646461 | Msa0229840:exon | 45.0% |
| ! | GCTTTCAAGTGTATCCTCGT+TGG | + | chr2_2:1646543-1646562 | Msa0229840:intron | 45.0% |
| CATTCAGGGCCAACACATTT+AGG | - | chr2_2:1646779-1646798 | None:intergenic | 45.0% | |
| ACACACTCGACGATGAATTC+AGG | + | chr2_2:1646945-1646964 | Msa0229840:intron | 45.0% | |
| CACACTCGACGATGAATTCA+GGG | + | chr2_2:1646946-1646965 | Msa0229840:intron | 45.0% | |
| ATTCTCATCAAGACTCCCCA+TGG | - | chr2_2:1647207-1647226 | None:intergenic | 45.0% | |
| GGGGAGTCTTGATGAGAATA+TGG | + | chr2_2:1647208-1647227 | Msa0229840:intron | 45.0% | |
| ! | TTACCTCCTTTTAGCATGGC+AGG | + | chr2_2:1647272-1647291 | Msa0229840:intron | 45.0% |
| ! | TACCTCCTTTTAGCATGGCA+GGG | + | chr2_2:1647273-1647292 | Msa0229840:intron | 45.0% |
| TTGCGGAGTTGTCCTTATCT+AGG | + | chr2_2:1647675-1647694 | Msa0229840:CDS | 45.0% | |
| CTGCGCCCAAATGTTAACAT+AGG | - | chr2_2:1647851-1647870 | None:intergenic | 45.0% | |
| CTATGTTAACATTTGGGCGC+AGG | + | chr2_2:1647849-1647868 | Msa0229840:intron | 45.0% | |
| ATGTTAACATTTGGGCGCAG+GGG | + | chr2_2:1647851-1647870 | Msa0229840:intron | 45.0% | |
| CTGGATATTGTTACATGCGG+TGG | + | chr2_2:1647916-1647935 | Msa0229840:CDS | 45.0% | |
| GATATTGTTACATGCGGTGG+AGG | + | chr2_2:1647919-1647938 | Msa0229840:CDS | 45.0% | |
| ATATCCATGCTTCAAGCCCA+AGG | + | chr2_2:1648497-1648516 | Msa0229840:intron | 45.0% | |
| TATCCATGCTTCAAGCCCAA+GGG | + | chr2_2:1648498-1648517 | Msa0229840:intron | 45.0% | |
| TGGAGAGCCCACAAAAATCA+AGG | - | chr2_2:1648656-1648675 | None:intergenic | 45.0% | |
| GGCAAGCCACAGAATTATCA+TGG | + | chr2_2:1648842-1648861 | Msa0229840:intron | 45.0% | |
| TTCTTAGGTAGTGCTAGGAG+AGG | - | chr2_2:1648985-1649004 | None:intergenic | 45.0% | |
| !! | TGTGGGCTAGATTCCTAGAA+AGG | - | chr2_2:1649013-1649032 | None:intergenic | 45.0% |
| ATCCTGTCAAGGATGAGCTT+TGG | + | chr2_2:1649277-1649296 | Msa0229840:intron | 45.0% | |
| TCCTGTCAAGGATGAGCTTT+GGG | + | chr2_2:1649278-1649297 | Msa0229840:intron | 45.0% | |
| ! | TTGCAGTTGATGTCCCAAGA+AGG | + | chr2_2:1649441-1649460 | Msa0229840:intron | 45.0% |
| CTACCTCCGTCCCTAATTAT+AGG | + | chr2_2:1650254-1650273 | Msa0229840:intron | 45.0% | |
| ! | GGTCTTATAATTAGGGACGG+AGG | + | chr2_2:1650522-1650541 | Msa0229840:intron | 45.0% |
| ! | TTTGCAGCTCTGACTTCGAT+TGG | + | chr2_2:1650571-1650590 | Msa0229840:intron | 45.0% |
| ! | TTGCAGCTCTGACTTCGATT+GGG | + | chr2_2:1650572-1650591 | Msa0229840:intron | 45.0% |
| AATCCCACTGTCCACTAATG+GGG | - | chr2_2:1650601-1650620 | None:intergenic | 45.0% | |
| CAATCCCACTGTCCACTAAT+GGG | - | chr2_2:1650602-1650621 | None:intergenic | 45.0% | |
| TTGCTTAATGCTAGGTGCCT+TGG | + | chr2_2:1650743-1650762 | Msa0229840:intron | 45.0% | |
| CATACAGGTGAAGGAACTGA+AGG | + | chr2_2:1650810-1650829 | Msa0229840:intron | 45.0% | |
| CATCACACCCAATCTGAGAA+AGG | - | chr2_2:1650840-1650859 | None:intergenic | 45.0% | |
| !! | CAAGCTTGTTGAAGGCAATC+AGG | + | chr2_2:1651013-1651032 | Msa0229840:CDS | 45.0% |
| ! | GCCAAATGGTGGAGTTTACA+AGG | + | chr2_2:1651214-1651233 | Msa0229840:CDS | 45.0% |
| AGGGACTTGCAGAACTTACA+AGG | + | chr2_2:1651483-1651502 | Msa0229840:intron | 45.0% | |
| GGGACTTGCAGAACTTACAA+GGG | + | chr2_2:1651484-1651503 | Msa0229840:intron | 45.0% | |
| !! | AGAACTTACAAGGGCACTTG+AGG | + | chr2_2:1651493-1651512 | Msa0229840:CDS | 45.0% |
| CAGAGTAGACAAAACCTTGG+GGG | - | chr2_2:1651525-1651544 | None:intergenic | 45.0% | |
| AGGCACATACACCATTGTGT+GGG | + | chr2_2:1651601-1651620 | Msa0229840:intron | 45.0% | |
| ATAGATGAGTGTAGGCCACT+TGG | - | chr2_2:1651690-1651709 | None:intergenic | 45.0% | |
| CTAAAAAAACCACAGGGCAG+CGG | - | chr2_2:1652264-1652283 | None:intergenic | 45.0% | |
| TGTTGGCATTTCTGTGAGCA+GGG | + | chr2_2:1652712-1652731 | Msa0229840:CDS | 45.0% | |
| TGATCAGCCTGCATGATCAA+TGG | + | chr2_2:1652777-1652796 | Msa0229840:three_prime_UTR | 45.0% | |
| ACGGACAACCAAAAAATCGC+AGG | + | chr2_2:1652822-1652841 | Msa0229840:three_prime_UTR | 45.0% | |
| TACATCCGACAAGTATCCGA+AGG | - | chr2_2:1652979-1652998 | None:intergenic | 45.0% | |
| !! | TAAAATACTTAAATTAAATT+TGG | - | chr2_2:1653038-1653057 | None:intergenic | 5.0% |
| ACTTTGAATCGCTTGGTCCG+TGG | + | chr2_2:1646333-1646352 | Msa0229840:five_prime_UTR | 50.0% | |
| TGAAGCGGAATGAACACGAG+GGG | - | chr2_2:1646382-1646401 | None:intergenic | 50.0% | |
| GTGAAGCGGAATGAACACGA+GGG | - | chr2_2:1646383-1646402 | None:intergenic | 50.0% | |
| TGTGAAGCGGAATGAACACG+AGG | - | chr2_2:1646384-1646403 | None:intergenic | 50.0% | |
| GCCATCTGTAAAGCCATGGT+AGG | - | chr2_2:1646446-1646465 | None:intergenic | 50.0% | |
| ! | AGGTGCCATCTGTAAAGCCA+TGG | - | chr2_2:1646450-1646469 | None:intergenic | 50.0% |
| AACGAGGATGAGAACCTTGG+AGG | - | chr2_2:1646477-1646496 | None:intergenic | 50.0% | |
| TCCAAGGTTCTCATCCTCGT+TGG | + | chr2_2:1646476-1646495 | Msa0229840:CDS | 50.0% | |
| TCCAACGAGGATGAGAACCT+TGG | - | chr2_2:1646480-1646499 | None:intergenic | 50.0% | |
| TACCTGAGCGGCAATAACAG+CGG | - | chr2_2:1646728-1646747 | None:intergenic | 50.0% | |
| TGATGAGAATATGGGAGGGC+AGG | + | chr2_2:1647217-1647236 | Msa0229840:intron | 50.0% | |
| TTCCCTGCCATGCTAAAAGG+AGG | - | chr2_2:1647278-1647297 | None:intergenic | 50.0% | |
| ! | TCCTTTTAGCATGGCAGGGA+AGG | + | chr2_2:1647277-1647296 | Msa0229840:intron | 50.0% |
| TCCTTCCCTGCCATGCTAAA+AGG | - | chr2_2:1647281-1647300 | None:intergenic | 50.0% | |
| GGAAGGACCCAGATGATTAG+TGG | + | chr2_2:1647294-1647313 | Msa0229840:intron | 50.0% | |
| GGACCCAGATGATTAGTGGA+TGG | + | chr2_2:1647298-1647317 | Msa0229840:intron | 50.0% | |
| GAAACAAAGGAGAAGAGGGG+AGG | + | chr2_2:1647326-1647345 | Msa0229840:intron | 50.0% | |
| AGAAGAGGGGAGGAAGAGTT+TGG | + | chr2_2:1647336-1647355 | Msa0229840:intron | 50.0% | |
| !! | TTTGGTAGCGAGAGTGAGCA+GGG | + | chr2_2:1647411-1647430 | Msa0229840:intron | 50.0% |
| TGTTAACATTTGGGCGCAGG+GGG | + | chr2_2:1647852-1647871 | Msa0229840:intron | 50.0% | |
| AGATGCGAGATTAGCAGCCA+GGG | + | chr2_2:1648770-1648789 | Msa0229840:intron | 50.0% | |
| GTCAACATCATGCTGTGGTG+AGG | - | chr2_2:1648948-1648967 | None:intergenic | 50.0% | |
| AGTGGGTCAACATCATGCTG+TGG | - | chr2_2:1648953-1648972 | None:intergenic | 50.0% | |
| TCCCAAAGCTCATCCTTGAC+AGG | - | chr2_2:1649282-1649301 | None:intergenic | 50.0% | |
| ! | ACGGTCTGGGACATCAAATG+CGG | - | chr2_2:1649400-1649419 | None:intergenic | 50.0% |
| TTCGTTTGCATGCTTGACCC+AGG | + | chr2_2:1649472-1649491 | Msa0229840:intron | 50.0% | |
| TTGCATGCTTGACCCAGGAT+AGG | + | chr2_2:1649477-1649496 | Msa0229840:intron | 50.0% | |
| TGACCCAGGATAGGTAACCT+TGG | + | chr2_2:1649486-1649505 | Msa0229840:intron | 50.0% | |
| GCTCCAAGGTTACCTATCCT+GGG | - | chr2_2:1649492-1649511 | None:intergenic | 50.0% | |
| TGCTCCAAGGTTACCTATCC+TGG | - | chr2_2:1649493-1649512 | None:intergenic | 50.0% | |
| !! | TTTACCATGGGAGTGCTCCA+AGG | - | chr2_2:1649506-1649525 | None:intergenic | 50.0% |
| GAATCTCCTCCAGAGAGTCA+AGG | + | chr2_2:1649851-1649870 | Msa0229840:intron | 50.0% | |
| GGTCCTATAATTAGGGACGG+AGG | - | chr2_2:1650260-1650279 | None:intergenic | 50.0% | |
| ATCCCACTGTCCACTAATGG+GGG | - | chr2_2:1650600-1650619 | None:intergenic | 50.0% | |
| CCAATCCCACTGTCCACTAA+TGG | - | chr2_2:1650603-1650622 | None:intergenic | 50.0% | |
| ! | CCATTAGTGGACAGTGGGAT+TGG | + | chr2_2:1650600-1650619 | Msa0229840:intron | 50.0% |
| ACTTGAGGAAAAAGCCCCCA+AGG | + | chr2_2:1651508-1651527 | Msa0229840:CDS | 50.0% | |
| GAGGCACATACACCATTGTG+TGG | + | chr2_2:1651600-1651619 | Msa0229840:intron | 50.0% | |
| AGAACTTACGATGGCACCTG+AGG | + | chr2_2:1652459-1652478 | Msa0229840:CDS | 50.0% | |
| GTTCTCGAACTTGTAGCCAG+CGG | + | chr2_2:1652535-1652554 | Msa0229840:intron | 50.0% | |
| GGTGAGCTCTCAATGGTTTC+TGG | - | chr2_2:1652611-1652630 | None:intergenic | 50.0% | |
| GTACACAGGGCATATCCTGT+TGG | + | chr2_2:1652695-1652714 | Msa0229840:CDS | 50.0% | |
| CTGCTCACAGAAATGCCAAC+AGG | - | chr2_2:1652713-1652732 | None:intergenic | 50.0% | |
| CTGTTGGCATTTCTGTGAGC+AGG | + | chr2_2:1652711-1652730 | Msa0229840:CDS | 50.0% | |
| GTTGGCATTTCTGTGAGCAG+GGG | + | chr2_2:1652713-1652732 | Msa0229840:CDS | 50.0% | |
| !! | GAGCAGGGGCATTACTGATT+TGG | + | chr2_2:1652727-1652746 | Msa0229840:CDS | 50.0% |
| ATGTAGGGCGGAACGGAAGT+AGG | - | chr2_2:1646265-1646284 | None:intergenic | 55.0% | |
| ACTTCCGTTCCGCCCTACAT+AGG | + | chr2_2:1646265-1646284 | Msa0229840:five_prime_UTR | 55.0% | |
| TTGAATCGCTTGGTCCGTGG+AGG | + | chr2_2:1646336-1646355 | Msa0229840:five_prime_UTR | 55.0% | |
| TGGTCCGTGGAGGACATAGA+CGG | + | chr2_2:1646346-1646365 | Msa0229840:five_prime_UTR | 55.0% | |
| ATGAGAACCTTGGAGGAGGC+AGG | - | chr2_2:1646470-1646489 | None:intergenic | 55.0% | |
| GAGGATGAGAACCTTGGAGG+AGG | - | chr2_2:1646474-1646493 | None:intergenic | 55.0% | |
| GTTCTCATCCTCGTTGGAGC+CGG | + | chr2_2:1646482-1646501 | Msa0229840:CDS | 55.0% | |
| !! | GAAGAATACCGGCTCCAACG+AGG | - | chr2_2:1646493-1646512 | None:intergenic | 55.0% |
| !! | AACAGCGGTGTCATATCCGG+AGG | - | chr2_2:1646713-1646732 | None:intergenic | 55.0% |
| !! | GTTTGGTAGCGAGAGTGAGC+AGG | + | chr2_2:1647410-1647429 | Msa0229840:intron | 55.0% |
| GCAGCTCCTATTGCAGCAGT+AGG | - | chr2_2:1647897-1647916 | None:intergenic | 55.0% | |
| ACTGCTGCAATAGGAGCTGC+TGG | + | chr2_2:1647897-1647916 | Msa0229840:CDS | 55.0% | |
| ! | GAGGTTGGATGGTCTTGGCT+TGG | + | chr2_2:1648283-1648302 | Msa0229840:CDS | 55.0% |
| !! | GTTGGATGGTCTTGGCTTGG+AGG | + | chr2_2:1648286-1648305 | Msa0229840:CDS | 55.0% |
| AAGCCCTTGGGCTTGAAGCA+TGG | - | chr2_2:1648504-1648523 | None:intergenic | 55.0% | |
| ! | AGCCCAAGGGCTTGTTTGAG+AGG | + | chr2_2:1648511-1648530 | Msa0229840:intron | 55.0% |
| ! | GCCCAAGGGCTTGTTTGAGA+GGG | + | chr2_2:1648512-1648531 | Msa0229840:intron | 55.0% |
| GCCCTCTCAAACAAGCCCTT+GGG | - | chr2_2:1648516-1648535 | None:intergenic | 55.0% | |
| CAGATGCGAGATTAGCAGCC+AGG | + | chr2_2:1648769-1648788 | Msa0229840:intron | 55.0% | |
| ATCCAACTGCGACCCTACAC+AGG | + | chr2_2:1648922-1648941 | Msa0229840:intron | 55.0% | |
| ! | CGGTCTGGGACATCAAATGC+GGG | - | chr2_2:1649399-1649418 | None:intergenic | 55.0% |
| ! | GTAACCTTGGAGCACTCCCA+TGG | + | chr2_2:1649499-1649518 | Msa0229840:intron | 55.0% |
| ! | TCCCCCCATTAGTGGACAGT+GGG | + | chr2_2:1650595-1650614 | Msa0229840:intron | 55.0% |
| TCCCACTGTCCACTAATGGG+GGG | - | chr2_2:1650599-1650618 | None:intergenic | 55.0% | |
| !! | GGATTGGTCCTCCGAACAGT+CGG | + | chr2_2:1650616-1650635 | Msa0229840:intron | 55.0% |
| GTAGGCATGTGCCCACACAA+TGG | - | chr2_2:1651615-1651634 | None:intergenic | 55.0% | |
| ACCTGAGGAGAAAGCCCCTA+AGG | + | chr2_2:1652474-1652493 | Msa0229840:CDS | 55.0% | |
| ACCTTAGGGGCTTTCTCCTC+AGG | - | chr2_2:1652478-1652497 | None:intergenic | 55.0% | |
| CACCGCTGTTATTGCCGCTC+AGG | + | chr2_2:1646723-1646742 | Msa0229840:CDS | 60.0% | |
| GGGAGGGCAGGAAAAGATCC+AGG | + | chr2_2:1647229-1647248 | Msa0229840:intron | 60.0% | |
| !! | GGATGGTCTTGGCTTGGAGG+TGG | + | chr2_2:1648289-1648308 | Msa0229840:CDS | 60.0% |
| CGCCCTCTCAAACAAGCCCT+TGG | - | chr2_2:1648517-1648536 | None:intergenic | 60.0% | |
| GCTGTGGTGAGGCCTGTGTA+GGG | - | chr2_2:1648937-1648956 | None:intergenic | 60.0% | |
| TGCTGTGGTGAGGCCTGTGT+AGG | - | chr2_2:1648938-1648957 | None:intergenic | 60.0% | |
| ! | CTCTGGAGGAGATTCTCCCG+AGG | - | chr2_2:1649846-1649865 | None:intergenic | 60.0% |
| !! | ACGGAGCACTGCACGCCAAA+AGG | - | chr2_2:1649980-1649999 | None:intergenic | 60.0% |
| CGATTGGGTCCCCCCATTAG+TGG | + | chr2_2:1650587-1650606 | Msa0229840:intron | 60.0% | |
| ! | GTCCCCCCATTAGTGGACAG+TGG | + | chr2_2:1650594-1650613 | Msa0229840:intron | 60.0% |
| TCCTCCGAACAGTCGGTCCT+TGG | + | chr2_2:1650623-1650642 | Msa0229840:intron | 60.0% | |
| CCTCCGAACAGTCGGTCCTT+GGG | + | chr2_2:1650624-1650643 | Msa0229840:intron | 60.0% | |
| GAAACACGGTATCCCGCCCA+AGG | - | chr2_2:1650643-1650662 | None:intergenic | 60.0% | |
| TCTCGAACTCCTAGCCCCTG+TGG | + | chr2_2:1651569-1651588 | Msa0229840:intron | 60.0% | |
| AACTCCTAGCCCCTGTGGCA+GGG | + | chr2_2:1651574-1651593 | Msa0229840:intron | 60.0% | |
| GATGGCACCTGCCTCCTCCA+AGG | + | chr2_2:1646460-1646479 | Msa0229840:CDS | 65.0% | |
| GGCCTGTGTAGGGTCGCAGT+TGG | - | chr2_2:1648927-1648946 | None:intergenic | 65.0% | |
| CCCAAGGACCGACTGTTCGG+AGG | - | chr2_2:1650627-1650646 | None:intergenic | 65.0% | |
| CCGCCCAAGGACCGACTGTT+CGG | - | chr2_2:1650630-1650649 | None:intergenic | 65.0% | |
| CCGAACAGTCGGTCCTTGGG+CGG | + | chr2_2:1650627-1650646 | Msa0229840:intron | 65.0% | |
| CGAACAGTCGGTCCTTGGGC+GGG | + | chr2_2:1650628-1650647 | Msa0229840:intron | 65.0% | |
| GAACTCCTAGCCCCTGTGGC+AGG | + | chr2_2:1651573-1651592 | Msa0229840:intron | 65.0% | |
| ACTCCTAGCCCCTGTGGCAG+GGG | + | chr2_2:1651575-1651594 | Msa0229840:intron | 65.0% | |
| CCTAGCCCCTGTGGCAGGGG+CGG | + | chr2_2:1651578-1651597 | Msa0229840:intron | 75.0% | |
| TGCCTCCGCCCCTGCCACAG+GGG | - | chr2_2:1651586-1651605 | None:intergenic | 75.0% | |
| GTGCCTCCGCCCCTGCCACA+GGG | - | chr2_2:1651587-1651606 | None:intergenic | 75.0% | |
| TGTGCCTCCGCCCCTGCCAC+AGG | - | chr2_2:1651588-1651607 | None:intergenic | 75.0% | |
| CTGGCTACGCCGCTGCCCTG+TGG | + | chr2_2:1652252-1652271 | Msa0229840:intron | 75.0% | |
| ! | CCGCCCCTGCCACAGGGGCT+AGG | - | chr2_2:1651581-1651600 | None:intergenic | 80.0% |
| ! | AGCCCCTGTGGCAGGGGCGG+AGG | + | chr2_2:1651581-1651600 | Msa0229840:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 1646215 | 1653167 | 1646215 | ID=Msa0229840;Name=Msa0229840 |
| chr2_2 | mRNA | 1646215 | 1653167 | 1646215 | ID=Msa0229840-mRNA-1;Parent=Msa0229840;Name=Msa0229840-mRNA-1;_AED=0.08;_eAED=0.08;_QI=234|1|1|1|1|1|12|413|327 |
| chr2_2 | exon | 1646215 | 1646503 | 1646215 | ID=Msa0229840-mRNA-1:exon:546;Parent=Msa0229840-mRNA-1 |
| chr2_2 | exon | 1646608 | 1646744 | 1646608 | ID=Msa0229840-mRNA-1:exon:547;Parent=Msa0229840-mRNA-1 |
| chr2_2 | exon | 1647653 | 1647731 | 1647653 | ID=Msa0229840-mRNA-1:exon:548;Parent=Msa0229840-mRNA-1 |
| chr2_2 | exon | 1647871 | 1647941 | 1647871 | ID=Msa0229840-mRNA-1:exon:549;Parent=Msa0229840-mRNA-1 |
| chr2_2 | exon | 1648053 | 1648154 | 1648053 | ID=Msa0229840-mRNA-1:exon:550;Parent=Msa0229840-mRNA-1 |
| chr2_2 | exon | 1648260 | 1648349 | 1648260 | ID=Msa0229840-mRNA-1:exon:551;Parent=Msa0229840-mRNA-1 |
| chr2_2 | exon | 1650817 | 1650891 | 1650817 | ID=Msa0229840-mRNA-1:exon:552;Parent=Msa0229840-mRNA-1 |
| chr2_2 | exon | 1651002 | 1651034 | 1651002 | ID=Msa0229840-mRNA-1:exon:553;Parent=Msa0229840-mRNA-1 |
| chr2_2 | exon | 1651155 | 1651235 | 1651155 | ID=Msa0229840-mRNA-1:exon:554;Parent=Msa0229840-mRNA-1 |
| chr2_2 | exon | 1651485 | 1651529 | 1651485 | ID=Msa0229840-mRNA-1:exon:555;Parent=Msa0229840-mRNA-1 |
| chr2_2 | exon | 1652451 | 1652495 | 1652451 | ID=Msa0229840-mRNA-1:exon:556;Parent=Msa0229840-mRNA-1 |
| chr2_2 | exon | 1652584 | 1653167 | 1652584 | ID=Msa0229840-mRNA-1:exon:557;Parent=Msa0229840-mRNA-1 |
| chr2_2 | five_prime_UTR | 1646215 | 1646448 | 1646215 | ID=Msa0229840-mRNA-1:five_prime_utr;Parent=Msa0229840-mRNA-1 |
| chr2_2 | CDS | 1646449 | 1646503 | 1646449 | ID=Msa0229840-mRNA-1:cds;Parent=Msa0229840-mRNA-1 |
| chr2_2 | CDS | 1646608 | 1646744 | 1646608 | ID=Msa0229840-mRNA-1:cds;Parent=Msa0229840-mRNA-1 |
| chr2_2 | CDS | 1647653 | 1647731 | 1647653 | ID=Msa0229840-mRNA-1:cds;Parent=Msa0229840-mRNA-1 |
| chr2_2 | CDS | 1647871 | 1647941 | 1647871 | ID=Msa0229840-mRNA-1:cds;Parent=Msa0229840-mRNA-1 |
| chr2_2 | CDS | 1648053 | 1648154 | 1648053 | ID=Msa0229840-mRNA-1:cds;Parent=Msa0229840-mRNA-1 |
| chr2_2 | CDS | 1648260 | 1648349 | 1648260 | ID=Msa0229840-mRNA-1:cds;Parent=Msa0229840-mRNA-1 |
| chr2_2 | CDS | 1650817 | 1650891 | 1650817 | ID=Msa0229840-mRNA-1:cds;Parent=Msa0229840-mRNA-1 |
| chr2_2 | CDS | 1651002 | 1651034 | 1651002 | ID=Msa0229840-mRNA-1:cds;Parent=Msa0229840-mRNA-1 |
| chr2_2 | CDS | 1651155 | 1651235 | 1651155 | ID=Msa0229840-mRNA-1:cds;Parent=Msa0229840-mRNA-1 |
| chr2_2 | CDS | 1651485 | 1651529 | 1651485 | ID=Msa0229840-mRNA-1:cds;Parent=Msa0229840-mRNA-1 |
| chr2_2 | CDS | 1652451 | 1652495 | 1652451 | ID=Msa0229840-mRNA-1:cds;Parent=Msa0229840-mRNA-1 |
| chr2_2 | CDS | 1652584 | 1652754 | 1652584 | ID=Msa0229840-mRNA-1:cds;Parent=Msa0229840-mRNA-1 |
| chr2_2 | three_prime_UTR | 1652755 | 1653167 | 1652755 | ID=Msa0229840-mRNA-1:three_prime_utr;Parent=Msa0229840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
