Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0529460 | XP_003604786.1 | 98.065 | 310 | 6 | 0 | 1 | 310 | 1 | 310 | 0.0 | 613 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0529460 | sp|Q5XF09|PT311_ARATH | 75.000 | 296 | 74 | 0 | 13 | 308 | 11 | 306 | 7.26e-163 | 458 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0529460 | G7JR70 | 98.065 | 310 | 6 | 0 | 1 | 310 | 1 | 310 | 0.0 | 613 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0108160 | Msa0529460 | 0.800957 | 1.129198e-48 | -8.615850e-47 |
| Msa0529460 | Msa0669000 | 0.833539 | 5.033337e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0529460 | MtrunA17_Chr4g0008071 | 98.065 | 310 | 6 | 0 | 1 | 310 | 1 | 310 | 0.0 | 613 |
| Msa0529460 | MtrunA17_Chr3g0112981 | 74.098 | 305 | 79 | 0 | 4 | 308 | 16 | 320 | 2.58e-165 | 462 |
| Msa0529460 | MtrunA17_Chr5g0436341 | 73.355 | 304 | 81 | 0 | 5 | 308 | 1 | 304 | 1.13e-164 | 460 |
| Msa0529460 | MtrunA17_Chr8g0382081 | 68.966 | 290 | 90 | 0 | 20 | 309 | 19 | 308 | 1.40e-146 | 414 |
| Msa0529460 | MtrunA17_Chr4g0056661 | 63.176 | 296 | 109 | 0 | 13 | 308 | 53 | 348 | 7.38e-132 | 379 |
| Msa0529460 | MtrunA17_Chr3g0103641 | 75.159 | 157 | 39 | 0 | 152 | 308 | 3 | 159 | 5.34e-82 | 245 |
| Msa0529460 | MtrunA17_Chr3g0103631 | 63.399 | 153 | 56 | 0 | 13 | 165 | 10 | 162 | 1.10e-66 | 206 |
| Msa0529460 | MtrunA17_Chr1g0160071 | 34.915 | 295 | 190 | 1 | 13 | 307 | 14 | 306 | 2.21e-56 | 185 |
| Msa0529460 | MtrunA17_Chr3g0114581 | 34.237 | 295 | 192 | 1 | 13 | 307 | 15 | 307 | 6.06e-56 | 184 |
| Msa0529460 | MtrunA17_Chr2g0307091 | 30.584 | 291 | 192 | 4 | 20 | 306 | 21 | 305 | 9.07e-31 | 118 |
| Msa0529460 | MtrunA17_Chr7g0270591 | 29.066 | 289 | 191 | 6 | 26 | 308 | 28 | 308 | 1.04e-25 | 105 |
| Msa0529460 | MtrunA17_Chr3g0137921 | 28.425 | 292 | 197 | 5 | 20 | 306 | 25 | 309 | 2.50e-25 | 103 |
| Msa0529460 | MtrunA17_Chr4g0058971 | 27.458 | 295 | 198 | 8 | 20 | 307 | 92 | 377 | 6.51e-22 | 94.7 |
| Msa0529460 | MtrunA17_Chr6g0449891 | 29.730 | 296 | 195 | 6 | 19 | 307 | 119 | 408 | 2.96e-21 | 93.2 |
| Msa0529460 | MtrunA17_Chr4g0069261 | 28.374 | 289 | 193 | 6 | 26 | 308 | 24 | 304 | 9.03e-21 | 91.7 |
| Msa0529460 | MtrunA17_Chr4g0063601 | 28.082 | 292 | 170 | 7 | 20 | 306 | 21 | 277 | 8.95e-20 | 87.8 |
| Msa0529460 | MtrunA17_Chr2g0312911 | 27.148 | 291 | 196 | 7 | 26 | 308 | 24 | 306 | 2.57e-19 | 87.0 |
| Msa0529460 | MtrunA17_Chr3g0117501 | 27.852 | 298 | 193 | 8 | 20 | 307 | 117 | 402 | 2.87e-19 | 87.4 |
| Msa0529460 | MtrunA17_Chr4g0046561 | 27.243 | 301 | 199 | 9 | 19 | 308 | 105 | 396 | 5.35e-17 | 80.9 |
| Msa0529460 | MtrunA17_Chr8g0341861 | 23.567 | 314 | 220 | 8 | 6 | 303 | 158 | 467 | 1.92e-16 | 79.7 |
| Msa0529460 | MtrunA17_Chr5g0419001 | 27.869 | 305 | 190 | 13 | 20 | 308 | 111 | 401 | 3.17e-14 | 72.8 |
| Msa0529460 | MtrunA17_Chr2g0288011 | 22.848 | 302 | 206 | 6 | 19 | 308 | 110 | 396 | 4.59e-13 | 69.3 |
| Msa0529460 | MtrunA17_Chr3g0097931 | 21.959 | 296 | 214 | 6 | 19 | 307 | 116 | 401 | 6.50e-13 | 68.6 |
| Msa0529460 | MtrunA17_Chr2g0291851 | 24.828 | 290 | 206 | 7 | 20 | 304 | 110 | 392 | 7.62e-13 | 68.6 |
| Msa0529460 | MtrunA17_Chr2g0326791 | 24.092 | 303 | 194 | 7 | 23 | 308 | 21 | 304 | 5.66e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0529460 | AT3G11320.1 | 75.000 | 296 | 74 | 0 | 13 | 308 | 11 | 306 | 7.38e-164 | 458 |
| Msa0529460 | AT5G05820.1 | 74.324 | 296 | 76 | 0 | 13 | 308 | 11 | 306 | 9.95e-164 | 458 |
| Msa0529460 | AT5G04160.1 | 67.458 | 295 | 94 | 2 | 16 | 309 | 15 | 308 | 7.07e-148 | 418 |
| Msa0529460 | AT3G10290.1 | 65.306 | 294 | 102 | 0 | 16 | 309 | 61 | 354 | 2.66e-143 | 408 |
| Msa0529460 | AT1G12500.1 | 61.667 | 300 | 112 | 1 | 12 | 308 | 55 | 354 | 1.35e-132 | 381 |
| Msa0529460 | AT1G77610.1 | 35.254 | 295 | 189 | 1 | 13 | 307 | 9 | 301 | 1.63e-55 | 183 |
| Msa0529460 | AT1G21870.1 | 35.811 | 296 | 186 | 3 | 13 | 307 | 15 | 307 | 6.26e-54 | 179 |
| Msa0529460 | AT5G25400.1 | 30.034 | 293 | 191 | 5 | 20 | 306 | 25 | 309 | 3.65e-28 | 112 |
| Msa0529460 | AT5G11230.1 | 30.375 | 293 | 190 | 5 | 20 | 306 | 25 | 309 | 6.94e-28 | 111 |
| Msa0529460 | AT4G32390.1 | 29.897 | 291 | 194 | 4 | 20 | 306 | 25 | 309 | 8.58e-27 | 108 |
| Msa0529460 | AT2G25520.1 | 30.584 | 291 | 192 | 4 | 20 | 306 | 25 | 309 | 1.63e-26 | 107 |
| Msa0529460 | AT3G17430.2 | 29.758 | 289 | 189 | 7 | 26 | 308 | 25 | 305 | 3.57e-25 | 104 |
| Msa0529460 | AT3G17430.1 | 29.758 | 289 | 189 | 7 | 26 | 308 | 25 | 305 | 3.57e-25 | 104 |
| Msa0529460 | AT1G53660.1 | 24.739 | 287 | 205 | 5 | 26 | 308 | 30 | 309 | 5.03e-21 | 92.0 |
| Msa0529460 | AT1G53660.3 | 24.739 | 287 | 205 | 5 | 26 | 308 | 48 | 327 | 6.27e-21 | 92.0 |
| Msa0529460 | AT1G53660.4 | 24.354 | 271 | 196 | 4 | 40 | 308 | 12 | 275 | 1.00e-19 | 87.8 |
| Msa0529460 | AT1G48230.1 | 28.819 | 288 | 189 | 7 | 26 | 306 | 25 | 303 | 1.06e-18 | 85.9 |
| Msa0529460 | AT3G14410.1 | 27.891 | 294 | 190 | 7 | 26 | 308 | 28 | 310 | 1.32e-18 | 85.5 |
| Msa0529460 | AT5G57100.1 | 28.296 | 311 | 205 | 10 | 3 | 308 | 55 | 352 | 3.54e-17 | 81.6 |
| Msa0529460 | AT1G53660.5 | 26.244 | 221 | 155 | 3 | 89 | 308 | 2 | 215 | 4.44e-17 | 79.3 |
| Msa0529460 | AT3G01550.1 | 27.273 | 297 | 198 | 7 | 20 | 307 | 86 | 373 | 2.19e-16 | 79.3 |
| Msa0529460 | AT5G33320.1 | 28.231 | 294 | 195 | 8 | 20 | 306 | 115 | 399 | 5.43e-16 | 78.2 |
| Msa0529460 | AT5G46110.4 | 26.490 | 302 | 202 | 8 | 20 | 310 | 115 | 407 | 7.75e-15 | 75.1 |
| Msa0529460 | AT5G46110.2 | 26.667 | 300 | 200 | 9 | 20 | 308 | 2 | 292 | 8.00e-15 | 73.9 |
| Msa0529460 | AT5G54800.1 | 23.000 | 300 | 204 | 5 | 19 | 306 | 103 | 387 | 1.27e-14 | 74.3 |
| Msa0529460 | AT5G46110.1 | 26.333 | 300 | 201 | 8 | 20 | 308 | 115 | 405 | 1.93e-14 | 73.9 |
| Msa0529460 | AT5G17630.1 | 24.915 | 293 | 210 | 7 | 20 | 308 | 119 | 405 | 1.33e-13 | 71.2 |
| Msa0529460 | AT1G06470.4 | 23.279 | 305 | 214 | 7 | 13 | 303 | 75 | 373 | 1.61e-13 | 70.9 |
| Msa0529460 | AT1G06470.2 | 23.279 | 305 | 214 | 7 | 13 | 303 | 75 | 373 | 1.61e-13 | 70.9 |
| Msa0529460 | AT1G06470.1 | 23.279 | 305 | 214 | 7 | 13 | 303 | 75 | 373 | 1.61e-13 | 70.9 |
| Msa0529460 | AT1G06470.3 | 23.279 | 305 | 214 | 7 | 13 | 303 | 75 | 373 | 1.61e-13 | 70.9 |
| Msa0529460 | AT3G01550.2 | 26.599 | 297 | 195 | 8 | 20 | 307 | 86 | 368 | 3.80e-13 | 69.7 |
| Msa0529460 | AT1G61800.1 | 22.373 | 295 | 214 | 7 | 19 | 307 | 103 | 388 | 8.06e-13 | 68.9 |
| Msa0529460 | AT1G61800.2 | 22.297 | 296 | 215 | 7 | 19 | 308 | 103 | 389 | 9.83e-13 | 68.6 |
| Msa0529460 | AT5G57100.2 | 30.144 | 209 | 134 | 8 | 3 | 207 | 55 | 255 | 1.35e-12 | 67.4 |
| Msa0529460 | AT1G48230.2 | 28.889 | 225 | 150 | 4 | 85 | 306 | 13 | 230 | 1.39e-12 | 67.4 |
| Msa0529460 | AT5G57100.3 | 31.053 | 190 | 121 | 7 | 3 | 190 | 55 | 236 | 5.68e-12 | 65.5 |
| Msa0529460 | AT5G55950.4 | 27.431 | 288 | 184 | 10 | 25 | 303 | 9 | 280 | 8.48e-11 | 62.4 |
Find 71 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTATGTACTCACCATTAT+TGG | 0.215949 | 4_1:-3005172 | Msa0529460:CDS |
| CAAAACCCTGTTTCAATGAT+AGG | 0.233587 | 4_1:-3005202 | Msa0529460:CDS |
| GGTAAGTGCACTTGTATATT+TGG | 0.266413 | 4_1:+3005572 | None:intergenic |
| AATTCCATGGCCAACAATTA+TGG | 0.267430 | 4_1:-3008009 | Msa0529460:CDS |
| TTTCATCATCTGGGTCATTA+TGG | 0.268745 | 4_1:+3008037 | None:intergenic |
| GTTCTAAGTATATCTCTTCT+TGG | 0.293003 | 4_1:+3005129 | None:intergenic |
| TCCTTTGGCTGTAGGCATAT+TGG | 0.298365 | 4_1:-3005028 | Msa0529460:three_prime_UTR |
| TACTGTCCATATGTCCCTTC+GGG | 0.304553 | 4_1:+3004964 | None:intergenic |
| CCCTCCATCAACAATGTTGC+AGG | 0.316998 | 4_1:+3005708 | None:intergenic |
| GAGTTTCATTGATATTTCTT+AGG | 0.317827 | 4_1:-3004922 | Msa0529460:three_prime_UTR |
| TCGGGGACATCCGATAAAAT+TGG | 0.318216 | 4_1:+3004982 | None:intergenic |
| AGCATTCCTATCATTGAAAC+AGG | 0.338931 | 4_1:+3005196 | None:intergenic |
| TTACGTTGGAATTTCTGTTA+TGG | 0.357840 | 4_1:-3007859 | Msa0529460:CDS |
| AAGTACTTGTTAAGCAACTA+TGG | 0.374954 | 4_1:-3007939 | Msa0529460:CDS |
| CAACTATGGTTACAAGTTCC+CGG | 0.376826 | 4_1:-3007925 | Msa0529460:CDS |
| TACAAGTGCACTTACCCTTC+AGG | 0.398263 | 4_1:-3005565 | Msa0529460:intron |
| ACTCCCTGCAACATTGTTGA+TGG | 0.399072 | 4_1:-3005712 | Msa0529460:CDS |
| ATACAGTATAACTCCAATAA+TGG | 0.400288 | 4_1:+3005159 | None:intergenic |
| GTGTCGTTTAATCAAGCTAT+TGG | 0.404696 | 4_1:-3007720 | Msa0529460:CDS |
| ATGACAACACCAGCAACAAC+AGG | 0.408451 | 4_1:+3007612 | None:intergenic |
| TTACTGTCCATATGTCCCTT+CGG | 0.416850 | 4_1:+3004963 | None:intergenic |
| GATATAACAACCATAATTGT+TGG | 0.422061 | 4_1:+3007999 | None:intergenic |
| CAATTATGGTTGTTATATCA+TGG | 0.428933 | 4_1:-3007995 | Msa0529460:CDS |
| CAGCCAAAGGACAGATAAGT+TGG | 0.433683 | 4_1:+3005040 | None:intergenic |
| CATGTCGTTGAATTATATTC+CGG | 0.433833 | 4_1:-3007742 | Msa0529460:CDS |
| GTGAGGATATAAGAATTATC+TGG | 0.438539 | 4_1:-3005653 | Msa0529460:CDS |
| CTTATCTGTCCTTTGGCTGT+AGG | 0.438896 | 4_1:-3005036 | Msa0529460:three_prime_UTR |
| AAGCACTGATTTAAATGCTC+TGG | 0.445838 | 4_1:+3006360 | None:intergenic |
| TTTGTTTCTCCGTTGTTTGT+GGG | 0.464908 | 4_1:-3007767 | Msa0529460:CDS |
| GTTGCTATACATGGCTCCTA+TGG | 0.466350 | 4_1:-3005748 | Msa0529460:CDS |
| AGCCAAAGGACAGATAAGTT+GGG | 0.466861 | 4_1:+3005041 | None:intergenic |
| CTGGTGTTGTCATTGCTAGT+GGG | 0.469808 | 4_1:-3007602 | Msa0529460:CDS |
| TAGGAGCCATGTATAGCAAC+AGG | 0.475165 | 4_1:+3005751 | None:intergenic |
| AAACGTGCTTAGAATCACTA+TGG | 0.477245 | 4_1:-3005685 | Msa0529460:CDS |
| AAACTCAAGTCCACATCTAA+AGG | 0.480651 | 4_1:+3004939 | None:intergenic |
| GATGTCCCCGAAGGGACATA+TGG | 0.501393 | 4_1:-3004970 | Msa0529460:three_prime_UTR |
| CAGGTGTTGGGAAATGCAAA+GGG | 0.501511 | 4_1:-3005259 | Msa0529460:CDS |
| CATGGCTCCTATGGCAATGT+TGG | 0.514283 | 4_1:-3005739 | Msa0529460:CDS |
| AATCCAAATAGATGAAAACT+TGG | 0.520000 | 4_1:+3006409 | None:intergenic |
| GTTTCAATGATAGGAATGCT+TGG | 0.522695 | 4_1:-3005193 | Msa0529460:CDS |
| CACTATGGAGCTTGCTAGTG+AGG | 0.523842 | 4_1:-3005670 | Msa0529460:CDS |
| TCAGGTGTTGGGAAATGCAA+AGG | 0.535246 | 4_1:-3005260 | Msa0529460:intron |
| TGATTTAAATGCTCTGGCAG+CGG | 0.537233 | 4_1:+3006366 | None:intergenic |
| TATGAACCTGTTGCTATACA+TGG | 0.537307 | 4_1:-3005757 | Msa0529460:CDS |
| GCCAATATGCCTACAGCCAA+AGG | 0.541751 | 4_1:+3005027 | None:intergenic |
| GCTGGTGTTGTCATTGCTAG+TGG | 0.546107 | 4_1:-3007603 | Msa0529460:CDS |
| ACAACCATAATTGTTGGCCA+TGG | 0.557096 | 4_1:+3008005 | None:intergenic |
| AAACAGTTGTTCAAGATCTG+TGG | 0.559430 | 4_1:-3007804 | Msa0529460:CDS |
| CCCTGCAACATTGTTGATGG+AGG | 0.561463 | 4_1:-3005709 | Msa0529460:CDS |
| GAAGAGATATACTTAGAACT+TGG | 0.565557 | 4_1:-3005125 | Msa0529460:exon |
| TTAGATTGCACATTCTGCAA+AGG | 0.570291 | 4_1:+3007828 | None:intergenic |
| TTCTGTAATTTACATACAAG+AGG | 0.579032 | 4_1:-3005072 | Msa0529460:three_prime_UTR |
| GCCAAAGGACAGATAAGTTG+GGG | 0.586237 | 4_1:+3005042 | None:intergenic |
| GTTCACAAAATATGCAAGAG+AGG | 0.587446 | 4_1:+3005614 | None:intergenic |
| TCATGGTACACTTCAAACAT+TGG | 0.602896 | 4_1:-3007978 | Msa0529460:CDS |
| CCTCCATCAACAATGTTGCA+GGG | 0.603121 | 4_1:+3005709 | None:intergenic |
| AGTAAGACCAACATTGCCAT+AGG | 0.605010 | 4_1:+3005732 | None:intergenic |
| TAACATGATCACAATCGAAG+AGG | 0.621307 | 4_1:-3005096 | Msa0529460:three_prime_UTR |
| CCTGCAACATTGTTGATGGA+GGG | 0.622872 | 4_1:-3005708 | Msa0529460:CDS |
| GGACAGTAAACCTTTAGATG+TGG | 0.628956 | 4_1:-3004949 | Msa0529460:three_prime_UTR |
| CGACATGTTCCCACAAACAA+CGG | 0.631148 | 4_1:+3007758 | None:intergenic |
| ACTGTCCATATGTCCCTTCG+GGG | 0.644992 | 4_1:+3004965 | None:intergenic |
| CAAAGGACAGATAAGTTGGG+GGG | 0.647411 | 4_1:+3005044 | None:intergenic |
| TGCAAAGGGAGCAGTTGCTG+TGG | 0.654421 | 4_1:-3005245 | Msa0529460:CDS |
| GGTATTGAGACATACCTGAA+GGG | 0.655819 | 4_1:+3005551 | None:intergenic |
| TGGTGTTGTCATTGCTAGTG+GGG | 0.656124 | 4_1:-3007601 | Msa0529460:intron |
| GCATTCCTATCATTGAAACA+GGG | 0.659164 | 4_1:+3005197 | None:intergenic |
| AAAGGACAGATAAGTTGGGG+GGG | 0.664213 | 4_1:+3005045 | None:intergenic |
| ATAGCTTGATTAAACGACAC+CGG | 0.690430 | 4_1:+3007723 | None:intergenic |
| CCAAAGGACAGATAAGTTGG+GGG | 0.717067 | 4_1:+3005043 | None:intergenic |
| ACATAACATCATGTGACACA+TGG | 0.730973 | 4_1:+3007893 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAAAAAGACATTTAAT+AGG | - | chr4_1:3007644-3007663 | Msa0529460:CDS | 10.0% |
| !! | AAAAACAATTTGATTATTGA+AGG | + | chr4_1:3006480-3006499 | None:intergenic | 15.0% |
| !! | ATATATTAAACTATGAAACA+CGG | - | chr4_1:3007492-3007511 | Msa0529460:intron | 15.0% |
| !!! | AATTTTTGTCAAATATTTTC+AGG | - | chr4_1:3007669-3007688 | Msa0529460:CDS | 15.0% |
| !!! | GAAATTTTCATTATCTTGTT+TGG | + | chr4_1:3005584-3005603 | None:intergenic | 20.0% |
| !!! | TGTTATGTTAGTTTTAGTAT+TGG | - | chr4_1:3006307-3006326 | Msa0529460:intron | 20.0% |
| !!! | GTTATGTTAGTTTTAGTATT+GGG | - | chr4_1:3006308-3006327 | Msa0529460:intron | 20.0% |
| !! | TATTGAAGGAATTAGAATAT+AGG | + | chr4_1:3006466-3006485 | None:intergenic | 20.0% |
| !! | AATGACAAAACAAATAGAAT+CGG | + | chr4_1:3006863-3006882 | None:intergenic | 20.0% |
| !!! | TTATTTGAAGTGAGTTTAAA+AGG | + | chr4_1:3007139-3007158 | None:intergenic | 20.0% |
| !! | ATTAGACATAAAGTAATCTA+TGG | + | chr4_1:3007420-3007439 | None:intergenic | 20.0% |
| !! | AATTGAGTTTTTCATCATCT+GGG | + | chr4_1:3004922-3004941 | None:intergenic | 25.0% |
| ! | GATATAACAACCATAATTGT+TGG | + | chr4_1:3004951-3004970 | None:intergenic | 25.0% |
| ! | CAATTATGGTTGTTATATCA+TGG | - | chr4_1:3004952-3004971 | Msa0529460:three_prime_UTR | 25.0% |
| ! | AATGAAAATTTCAATCCCAA+AGG | - | chr4_1:3005592-3005611 | Msa0529460:CDS | 25.0% |
| ! | ATGAAAATTTCAATCCCAAA+GGG | - | chr4_1:3005593-3005612 | Msa0529460:CDS | 25.0% |
| ! | TCAATATCATGGAGATATAT+CGG | - | chr4_1:3005735-3005754 | Msa0529460:CDS | 25.0% |
| ! | GAAATTTCCATTATCTTGTT+TGG | + | chr4_1:3005785-3005804 | None:intergenic | 25.0% |
| ! | AATGGAAATTTCAATGTCAA+CGG | - | chr4_1:3005793-3005812 | Msa0529460:intron | 25.0% |
| ! | AAGTATTCCGTCATAATTAT+TGG | - | chr4_1:3005958-3005977 | Msa0529460:intron | 25.0% |
| ! | AGTATTCCGTCATAATTATT+GGG | - | chr4_1:3005959-3005978 | Msa0529460:intron | 25.0% |
| !! | GCAATTTTCATTATCTTGTT+TGG | + | chr4_1:3005988-3006007 | None:intergenic | 25.0% |
| !! | ATTGAAGTTTTCATCATGTT+TGG | + | chr4_1:3006164-3006183 | None:intergenic | 25.0% |
| !!! | GGTTCTTTTTTGTTTTCAAT+AGG | - | chr4_1:3006202-3006221 | Msa0529460:intron | 25.0% |
| ! | AAACTCTCAATATGATGAAT+AGG | + | chr4_1:3006248-3006267 | None:intergenic | 25.0% |
| !!! | ACATACAACATTATTTTTGC+AGG | - | chr4_1:3006510-3006529 | Msa0529460:intron | 25.0% |
| !!! | CATACAACATTATTTTTGCA+GGG | - | chr4_1:3006511-3006530 | Msa0529460:intron | 25.0% |
| ! | AATCCAAATAGATGAAAACT+TGG | + | chr4_1:3006541-3006560 | None:intergenic | 25.0% |
| !!! | TCAAGATATTTTGTTGTCTT+CGG | - | chr4_1:3006609-3006628 | Msa0529460:intron | 25.0% |
| !! | ATGAAATAAGTTGAAATGTG+TGG | + | chr4_1:3007460-3007479 | None:intergenic | 25.0% |
| ! | AGTTTAATATATACAGTGCA+TGG | + | chr4_1:3007484-3007503 | None:intergenic | 25.0% |
| ! | TTTAACGTAATCACATGTAT+TGG | - | chr4_1:3007567-3007586 | Msa0529460:intron | 25.0% |
| ! | ATACAGTATAACTCCAATAA+TGG | + | chr4_1:3007791-3007810 | None:intergenic | 25.0% |
| ! | TTCTGTAATTTACATACAAG+AGG | - | chr4_1:3007875-3007894 | Msa0529460:CDS | 25.0% |
| ! | AAATTGGAACGATACAAAAA+CGG | + | chr4_1:3007952-3007971 | None:intergenic | 25.0% |
| !! | TTGTATCGTTCCAATTTTAT+CGG | - | chr4_1:3007955-3007974 | Msa0529460:CDS | 25.0% |
| ! | GAGTTTCATTGATATTTCTT+AGG | - | chr4_1:3008025-3008044 | Msa0529460:CDS | 25.0% |
| ! | GAATTGAGTTTTTCATCATC+TGG | + | chr4_1:3004923-3004942 | None:intergenic | 30.0% |
| TGATGAAAAACTCAATTCCA+TGG | - | chr4_1:3004925-3004944 | Msa0529460:three_prime_UTR | 30.0% | |
| ! | AAGTACTTGTTAAGCAACTA+TGG | - | chr4_1:3005008-3005027 | Msa0529460:three_prime_UTR | 30.0% |
| TTACGTTGGAATTTCTGTTA+TGG | - | chr4_1:3005088-3005107 | Msa0529460:three_prime_UTR | 30.0% | |
| CATGTCGTTGAATTATATTC+CGG | - | chr4_1:3005205-3005224 | Msa0529460:CDS | 30.0% | |
| !!! | GAATTGTTTTAGTGCATGAT+TGG | - | chr4_1:3005451-3005470 | Msa0529460:intron | 30.0% |
| ! | TGTAACTTGTCTCAAAATCA+CGG | - | chr4_1:3005530-3005549 | Msa0529460:intron | 30.0% |
| CAATATTCCGCCATAATTAT+CGG | - | chr4_1:3005554-3005573 | Msa0529460:intron | 30.0% | |
| AATATTCCGCCATAATTATC+GGG | - | chr4_1:3005555-3005574 | Msa0529460:intron | 30.0% | |
| GATTGGATTGATACTGAATT+TGG | - | chr4_1:3005664-3005683 | Msa0529460:CDS | 30.0% | |
| TGGATTCCTGATAATTATGA+CGG | + | chr4_1:3005765-3005784 | None:intergenic | 30.0% | |
| ATGGAAATTTCAATGTCAAC+GGG | - | chr4_1:3005794-3005813 | Msa0529460:intron | 30.0% | |
| GAATTGTTTAAGTGCATGAT+TGG | - | chr4_1:3005849-3005868 | Msa0529460:intron | 30.0% | |
| TGGATTCCCAATAATTATGA+CGG | + | chr4_1:3005968-3005987 | None:intergenic | 30.0% | |
| AATGAAAATTGCAGTCTCAA+TGG | - | chr4_1:3005996-3006015 | Msa0529460:intron | 30.0% | |
| ATGAAAATTGCAGTCTCAAT+GGG | - | chr4_1:3005997-3006016 | Msa0529460:intron | 30.0% | |
| ATGAAAACTTCAATCCCAAT+GGG | - | chr4_1:3006170-3006189 | Msa0529460:intron | 30.0% | |
| !! | ATATTTTGTTGTCTTCGGAA+GGG | - | chr4_1:3006614-3006633 | Msa0529460:intron | 30.0% |
| GGTAATGATCTTATTGGATT+TGG | - | chr4_1:3006635-3006654 | Msa0529460:intron | 30.0% | |
| TTCGATCTGATTTACAAAGT+TGG | - | chr4_1:3006743-3006762 | Msa0529460:intron | 30.0% | |
| AAAACAAATAGAATCGGATC+TGG | + | chr4_1:3006857-3006876 | None:intergenic | 30.0% | |
| ! | ATACCTTAAATCAGAAGTGT+CGG | - | chr4_1:3007069-3007088 | Msa0529460:intron | 30.0% |
| ! | TAATTTGCACTTATAGCATG+TGG | + | chr4_1:3007097-3007116 | None:intergenic | 30.0% |
| GTGAGGATATAAGAATTATC+TGG | - | chr4_1:3007294-3007313 | Msa0529460:intron | 30.0% | |
| !!! | TGTGAACCTCACTAATTTTT+TGG | - | chr4_1:3007349-3007368 | Msa0529460:intron | 30.0% |
| AAGTTGAAATGTGTGGAAAA+TGG | + | chr4_1:3007453-3007472 | None:intergenic | 30.0% | |
| !!! | TGTCAAATATTTTCAGGTGT+TGG | - | chr4_1:3007675-3007694 | Msa0529460:CDS | 30.0% |
| !!! | GTCAAATATTTTCAGGTGTT+GGG | - | chr4_1:3007676-3007695 | Msa0529460:CDS | 30.0% |
| ! | GTTCTAAGTATATCTCTTCT+TGG | + | chr4_1:3007821-3007840 | None:intergenic | 30.0% |
| GAAGAGATATACTTAGAACT+TGG | - | chr4_1:3007822-3007841 | Msa0529460:CDS | 30.0% | |
| TTTCATCATCTGGGTCATTA+TGG | + | chr4_1:3004913-3004932 | None:intergenic | 35.0% | |
| AATTCCATGGCCAACAATTA+TGG | - | chr4_1:3004938-3004957 | Msa0529460:three_prime_UTR | 35.0% | |
| TCATGGTACACTTCAAACAT+TGG | - | chr4_1:3004969-3004988 | Msa0529460:three_prime_UTR | 35.0% | |
| ACATAACATCATGTGACACA+TGG | + | chr4_1:3005057-3005076 | None:intergenic | 35.0% | |
| ! | TGTTCAGTTTTCAGTTACGT+TGG | - | chr4_1:3005074-3005093 | Msa0529460:three_prime_UTR | 35.0% |
| TTAGATTGCACATTCTGCAA+AGG | + | chr4_1:3005122-3005141 | None:intergenic | 35.0% | |
| AAACAGTTGTTCAAGATCTG+TGG | - | chr4_1:3005143-3005162 | Msa0529460:CDS | 35.0% | |
| !! | TTTTGTTTCTCCGTTGTTTG+TGG | - | chr4_1:3005179-3005198 | Msa0529460:CDS | 35.0% |
| ! | TTTGTTTCTCCGTTGTTTGT+GGG | - | chr4_1:3005180-3005199 | Msa0529460:CDS | 35.0% |
| ATAGCTTGATTAAACGACAC+CGG | + | chr4_1:3005227-3005246 | None:intergenic | 35.0% | |
| !! | GTGTCGTTTAATCAAGCTAT+TGG | - | chr4_1:3005227-3005246 | Msa0529460:CDS | 35.0% |
| GCAAAAACAGCAGTGAAAAA+AGG | + | chr4_1:3005263-3005282 | None:intergenic | 35.0% | |
| TGTTGTGAGTAGAAAAAGAG+AGG | - | chr4_1:3005286-3005305 | Msa0529460:intron | 35.0% | |
| GTTTGGATTCCCGATAATTA+TGG | + | chr4_1:3005567-3005586 | None:intergenic | 35.0% | |
| AATCCCAAAGGGTGATAAAT+AGG | - | chr4_1:3005604-3005623 | Msa0529460:CDS | 35.0% | |
| TGACCTATTTATCACCCTTT+GGG | + | chr4_1:3005610-3005629 | None:intergenic | 35.0% | |
| TTGACCTATTTATCACCCTT+TGG | + | chr4_1:3005611-3005630 | None:intergenic | 35.0% | |
| TGAATTGTTTAGCGCATGAT+TGG | - | chr4_1:3005647-3005666 | Msa0529460:CDS | 35.0% | |
| TGGATTGATACTGAATTTGG+TGG | - | chr4_1:3005667-3005686 | Msa0529460:CDS | 35.0% | |
| GTGTACTTGTCTCAATATCA+TGG | - | chr4_1:3005724-3005743 | Msa0529460:CDS | 35.0% | |
| GGTATTCCGTCATAATTATC+AGG | - | chr4_1:3005756-3005775 | Msa0529460:CDS | 35.0% | |
| CAGGAATCCAAACAAGATAA+TGG | - | chr4_1:3005775-3005794 | Msa0529460:CDS | 35.0% | |
| AATGTCAACGGGTGATAAAT+AGG | - | chr4_1:3005805-3005824 | Msa0529460:intron | 35.0% | |
| !! | AAATAGGTCGATGCTAGTTT+TGG | - | chr4_1:3005821-3005840 | Msa0529460:intron | 35.0% |
| GATTGGATTGACACTGAATT+TGG | - | chr4_1:3005866-3005885 | Msa0529460:intron | 35.0% | |
| !!! | GAACTGTTTTAGTGCATGTT+TGG | - | chr4_1:3006052-3006071 | Msa0529460:intron | 35.0% |
| TTAGTGCATGTTTGGATTGA+CGG | - | chr4_1:3006060-3006079 | Msa0529460:intron | 35.0% | |
| GATGAAAACTTCAATCCCAA+TGG | - | chr4_1:3006169-3006188 | Msa0529460:intron | 35.0% | |
| TGAAAACTTCAATCCCAATG+GGG | - | chr4_1:3006171-3006190 | Msa0529460:intron | 35.0% | |
| ATGAATAGGATTACCTCTTG+TGG | + | chr4_1:3006234-3006253 | None:intergenic | 35.0% | |
| !! | CATATTTGCTATAGTGGAAG+AGG | + | chr4_1:3006273-3006292 | None:intergenic | 35.0% |
| ! | GAGCCAAGTTTTCATCTATT+TGG | - | chr4_1:3006535-3006554 | Msa0529460:intron | 35.0% |
| !! | AAGCACTGATTTAAATGCTC+TGG | + | chr4_1:3006590-3006609 | None:intergenic | 35.0% |
| !! | GATATTTTGTTGTCTTCGGA+AGG | - | chr4_1:3006613-3006632 | Msa0529460:intron | 35.0% |
| GATTTGGATTCTTTGCAGAT+AGG | - | chr4_1:3006651-3006670 | Msa0529460:intron | 35.0% | |
| ! | ATCAGATCGAAAAAGTACGT+TGG | + | chr4_1:3006734-3006753 | None:intergenic | 35.0% |
| TAGAATCGGATCTGGATTAT+GGG | + | chr4_1:3006849-3006868 | None:intergenic | 35.0% | |
| ATAGAATCGGATCTGGATTA+TGG | + | chr4_1:3006850-3006869 | None:intergenic | 35.0% | |
| TATGAACCTGTTGCTATACA+TGG | - | chr4_1:3007190-3007209 | Msa0529460:intron | 35.0% | |
| AAACGTGCTTAGAATCACTA+TGG | - | chr4_1:3007262-3007281 | Msa0529460:intron | 35.0% | |
| GTTCACAAAATATGCAAGAG+AGG | + | chr4_1:3007336-3007355 | None:intergenic | 35.0% | |
| TGGTCACCAAAAAATTAGTG+AGG | + | chr4_1:3007358-3007377 | None:intergenic | 35.0% | |
| GGTAAGTGCACTTGTATATT+TGG | + | chr4_1:3007378-3007397 | None:intergenic | 35.0% | |
| ! | TGCTCTGAGTAAATGTTTAG+TGG | + | chr4_1:3007618-3007637 | None:intergenic | 35.0% |
| CAAAACCCTGTTTCAATGAT+AGG | - | chr4_1:3007745-3007764 | Msa0529460:CDS | 35.0% | |
| GCATTCCTATCATTGAAACA+GGG | + | chr4_1:3007753-3007772 | None:intergenic | 35.0% | |
| AGCATTCCTATCATTGAAAC+AGG | + | chr4_1:3007754-3007773 | None:intergenic | 35.0% | |
| GTTTCAATGATAGGAATGCT+TGG | - | chr4_1:3007754-3007773 | Msa0529460:CDS | 35.0% | |
| TAACATGATCACAATCGAAG+AGG | - | chr4_1:3007851-3007870 | Msa0529460:CDS | 35.0% | |
| AAACTCAAGTCCACATCTAA+AGG | + | chr4_1:3008011-3008030 | None:intergenic | 35.0% | |
| ACAACCATAATTGTTGGCCA+TGG | + | chr4_1:3004945-3004964 | None:intergenic | 40.0% | |
| CAACTATGGTTACAAGTTCC+CGG | - | chr4_1:3005022-3005041 | Msa0529460:three_prime_UTR | 40.0% | |
| TGACACATGGTGAGAAAAAC+CGG | + | chr4_1:3005044-3005063 | None:intergenic | 40.0% | |
| TGAGTAGAAAAAGAGAGGCT+TGG | - | chr4_1:3005291-3005310 | Msa0529460:intron | 40.0% | |
| GAGTAGAAAAAGAGAGGCTT+GGG | - | chr4_1:3005292-3005311 | Msa0529460:intron | 40.0% | |
| TGGATTCCCGATAATTATGG+CGG | + | chr4_1:3005564-3005583 | None:intergenic | 40.0% | |
| AGTCTCAATGGGTGAGAAAT+AGG | - | chr4_1:3006008-3006027 | Msa0529460:intron | 40.0% | |
| TTCGTTCAAGCTTCAAAGTG+TGG | - | chr4_1:3006115-3006134 | Msa0529460:intron | 40.0% | |
| AATCCCAATGGGGAGAAATA+TGG | - | chr4_1:3006181-3006200 | Msa0529460:intron | 40.0% | |
| GAACCATATTTCTCCCCATT+GGG | + | chr4_1:3006187-3006206 | None:intergenic | 40.0% | |
| AGAACCATATTTCTCCCCAT+TGG | + | chr4_1:3006188-3006207 | None:intergenic | 40.0% | |
| AATAGGATTACCTCTTGTGG+AGG | + | chr4_1:3006231-3006250 | None:intergenic | 40.0% | |
| !! | CCTGTGCATATTTGCTATAG+TGG | + | chr4_1:3006279-3006298 | None:intergenic | 40.0% |
| CCACTATAGCAAATATGCAC+AGG | - | chr4_1:3006276-3006295 | Msa0529460:intron | 40.0% | |
| TGATTTAAATGCTCTGGCAG+CGG | + | chr4_1:3006584-3006603 | None:intergenic | 40.0% | |
| CGGAAGGGTAATGATCTTAT+TGG | - | chr4_1:3006629-3006648 | Msa0529460:intron | 40.0% | |
| AAGACATGTCATGTCACTGA+CGG | - | chr4_1:3006945-3006964 | Msa0529460:intron | 40.0% | |
| TTCGTTGTTCAACACAGACA+AGG | + | chr4_1:3007048-3007067 | None:intergenic | 40.0% | |
| AGTAAGACCAACATTGCCAT+AGG | + | chr4_1:3007218-3007237 | None:intergenic | 40.0% | |
| ! | GGTATTGAGACATACCTGAA+GGG | + | chr4_1:3007399-3007418 | None:intergenic | 40.0% |
| ! | TGGTATTGAGACATACCTGA+AGG | + | chr4_1:3007400-3007419 | None:intergenic | 40.0% |
| !! | CACATGTATTGGTGTTGTGT+CGG | - | chr4_1:3007578-3007597 | Msa0529460:intron | 40.0% |
| GGCTATGTACTCACCATTAT+TGG | - | chr4_1:3007775-3007794 | Msa0529460:CDS | 40.0% | |
| AGCCAAAGGACAGATAAGTT+GGG | + | chr4_1:3007909-3007928 | None:intergenic | 40.0% | |
| TTACTGTCCATATGTCCCTT+CGG | + | chr4_1:3007987-3008006 | None:intergenic | 40.0% | |
| GGACAGTAAACCTTTAGATG+TGG | - | chr4_1:3007998-3008017 | Msa0529460:CDS | 40.0% | |
| GACACATGGTGAGAAAAACC+GGG | + | chr4_1:3005043-3005062 | None:intergenic | 45.0% | |
| CGACATGTTCCCACAAACAA+CGG | + | chr4_1:3005192-3005211 | None:intergenic | 45.0% | |
| ! | ACTCTTTTGCCTGTTGTTGC+TGG | - | chr4_1:3005326-3005345 | Msa0529460:intron | 45.0% |
| ATGACAACACCAGCAACAAC+AGG | + | chr4_1:3005338-3005357 | None:intergenic | 45.0% | |
| !! | CTGGTGTTGTCATTGCTAGT+GGG | - | chr4_1:3005345-3005364 | Msa0529460:intron | 45.0% |
| !! | TGGTGTTGTCATTGCTAGTG+GGG | - | chr4_1:3005346-3005365 | Msa0529460:intron | 45.0% |
| GTTTGGATTGACGGTGAGTT+TGG | - | chr4_1:3006069-3006088 | Msa0529460:intron | 45.0% | |
| CAATAGGTTTCCTCCACAAG+AGG | - | chr4_1:3006218-3006237 | Msa0529460:intron | 45.0% | |
| TGAGTCGTCAACTCTTGATC+AGG | + | chr4_1:3006707-3006726 | None:intergenic | 45.0% | |
| AATCGGATCTGGATTATGGG+CGG | + | chr4_1:3006846-3006865 | None:intergenic | 45.0% | |
| GTCAGTGACATGACATGTCT+TGG | + | chr4_1:3006946-3006965 | None:intergenic | 45.0% | |
| ! | GCACCGACACTTCTGATTTA+AGG | + | chr4_1:3007075-3007094 | None:intergenic | 45.0% |
| TAGGAGCCATGTATAGCAAC+AGG | + | chr4_1:3007199-3007218 | None:intergenic | 45.0% | |
| GTTGCTATACATGGCTCCTA+TGG | - | chr4_1:3007199-3007218 | Msa0529460:intron | 45.0% | |
| ACTCCCTGCAACATTGTTGA+TGG | - | chr4_1:3007235-3007254 | Msa0529460:intron | 45.0% | |
| CCTCCATCAACAATGTTGCA+GGG | + | chr4_1:3007241-3007260 | None:intergenic | 45.0% | |
| ! | CCTGCAACATTGTTGATGGA+GGG | - | chr4_1:3007239-3007258 | Msa0529460:intron | 45.0% |
| TACAAGTGCACTTACCCTTC+AGG | - | chr4_1:3007382-3007401 | Msa0529460:intron | 45.0% | |
| !! | TCAGGTGTTGGGAAATGCAA+AGG | - | chr4_1:3007687-3007706 | Msa0529460:CDS | 45.0% |
| !! | CAGGTGTTGGGAAATGCAAA+GGG | - | chr4_1:3007688-3007707 | Msa0529460:CDS | 45.0% |
| ! | AAAGGACAGATAAGTTGGGG+GGG | + | chr4_1:3007905-3007924 | None:intergenic | 45.0% |
| ! | CAAAGGACAGATAAGTTGGG+GGG | + | chr4_1:3007906-3007925 | None:intergenic | 45.0% |
| ! | CCAAAGGACAGATAAGTTGG+GGG | + | chr4_1:3007907-3007926 | None:intergenic | 45.0% |
| GCCAAAGGACAGATAAGTTG+GGG | + | chr4_1:3007908-3007927 | None:intergenic | 45.0% | |
| CAGCCAAAGGACAGATAAGT+TGG | + | chr4_1:3007910-3007929 | None:intergenic | 45.0% | |
| CTTATCTGTCCTTTGGCTGT+AGG | - | chr4_1:3007911-3007930 | Msa0529460:CDS | 45.0% | |
| TCCTTTGGCTGTAGGCATAT+TGG | - | chr4_1:3007919-3007938 | Msa0529460:CDS | 45.0% | |
| TCGGGGACATCCGATAAAAT+TGG | + | chr4_1:3007968-3007987 | None:intergenic | 45.0% | |
| ! | ATTTTATCGGATGTCCCCGA+AGG | - | chr4_1:3007968-3007987 | Msa0529460:CDS | 45.0% |
| ! | TTTTATCGGATGTCCCCGAA+GGG | - | chr4_1:3007969-3007988 | Msa0529460:CDS | 45.0% |
| TACTGTCCATATGTCCCTTC+GGG | + | chr4_1:3007986-3008005 | None:intergenic | 45.0% | |
| !!! | TTATAATTTTAAGATTTTTT+TGG | - | chr4_1:3005395-3005414 | Msa0529460:intron | 5.0% |
| !! | GCTGGTGTTGTCATTGCTAG+TGG | - | chr4_1:3005344-3005363 | Msa0529460:intron | 50.0% |
| CAACTCTTGATCAGGCTGTC+TGG | + | chr4_1:3006699-3006718 | None:intergenic | 50.0% | |
| TAGTCCAGACTGCGTTACTG+TGG | - | chr4_1:3006793-3006812 | Msa0529460:intron | 50.0% | |
| TCTGGATTATGGGCGGTCAA+TGG | + | chr4_1:3006839-3006858 | None:intergenic | 50.0% | |
| CATGGCTCCTATGGCAATGT+TGG | - | chr4_1:3007208-3007227 | Msa0529460:intron | 50.0% | |
| ! | CCCTGCAACATTGTTGATGG+AGG | - | chr4_1:3007238-3007257 | Msa0529460:intron | 50.0% |
| CCCTCCATCAACAATGTTGC+AGG | + | chr4_1:3007242-3007261 | None:intergenic | 50.0% | |
| !! | CACTATGGAGCTTGCTAGTG+AGG | - | chr4_1:3007277-3007296 | Msa0529460:intron | 50.0% |
| !! | TTGTGTCGGTGTCAACGTGT+TGG | - | chr4_1:3007592-3007611 | Msa0529460:intron | 50.0% |
| CCCCCAACTTATCTGTCCTT+TGG | - | chr4_1:3007904-3007923 | Msa0529460:CDS | 50.0% | |
| GCCAATATGCCTACAGCCAA+AGG | + | chr4_1:3007923-3007942 | None:intergenic | 50.0% | |
| ACTGTCCATATGTCCCTTCG+GGG | + | chr4_1:3007985-3008004 | None:intergenic | 50.0% | |
| GTTGCCACAGTAACGCAGTC+TGG | + | chr4_1:3006800-3006819 | None:intergenic | 55.0% | |
| TGCAAAGGGAGCAGTTGCTG+TGG | - | chr4_1:3007702-3007721 | Msa0529460:CDS | 55.0% | |
| GATGTCCCCGAAGGGACATA+TGG | - | chr4_1:3007977-3007996 | Msa0529460:CDS | 55.0% | |
| ! | GGACAGATAAGTTGGGGGGG+TGG | + | chr4_1:3007902-3007921 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 3004885 | 3008084 | 3004885 | ID=Msa0529460;Name=Msa0529460 |
| chr4_1 | mRNA | 3004885 | 3008084 | 3004885 | ID=Msa0529460-mRNA-1;Parent=Msa0529460;Name=Msa0529460-mRNA-1;_AED=0.01;_eAED=0.01;_QI=30|1|1|1|0.66|1|4|247|310 |
| chr4_1 | exon | 3004885 | 3005278 | 3004885 | ID=Msa0529460-mRNA-1:exon:858;Parent=Msa0529460-mRNA-1 |
| chr4_1 | exon | 3005566 | 3005794 | 3005566 | ID=Msa0529460-mRNA-1:exon:857;Parent=Msa0529460-mRNA-1 |
| chr4_1 | exon | 3006334 | 3006437 | 3006334 | ID=Msa0529460-mRNA-1:exon:856;Parent=Msa0529460-mRNA-1 |
| chr4_1 | exon | 3007602 | 3008084 | 3007602 | ID=Msa0529460-mRNA-1:exon:855;Parent=Msa0529460-mRNA-1 |
| chr4_1 | five_prime_UTR | 3008055 | 3008084 | 3008055 | ID=Msa0529460-mRNA-1:five_prime_utr;Parent=Msa0529460-mRNA-1 |
| chr4_1 | CDS | 3007602 | 3008054 | 3007602 | ID=Msa0529460-mRNA-1:cds;Parent=Msa0529460-mRNA-1 |
| chr4_1 | CDS | 3006334 | 3006437 | 3006334 | ID=Msa0529460-mRNA-1:cds;Parent=Msa0529460-mRNA-1 |
| chr4_1 | CDS | 3005566 | 3005794 | 3005566 | ID=Msa0529460-mRNA-1:cds;Parent=Msa0529460-mRNA-1 |
| chr4_1 | CDS | 3005132 | 3005278 | 3005132 | ID=Msa0529460-mRNA-1:cds;Parent=Msa0529460-mRNA-1 |
| chr4_1 | three_prime_UTR | 3004885 | 3005131 | 3004885 | ID=Msa0529460-mRNA-1:three_prime_utr;Parent=Msa0529460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
