Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0531010 | KEH28745.1 | 55.652 | 115 | 10 | 3 | 7 | 120 | 21 | 95 | 3.37e-27 | 106 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0531010 | A0A072US92 | 55.652 | 115 | 10 | 3 | 7 | 120 | 21 | 95 | 1.61e-27 | 106 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0531010 | Msa0548240 | 0.815075 | 1.113419e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0531010 | MtrunA17_Chr4g0004031 | 88.636 | 44 | 4 | 1 | 78 | 120 | 1 | 44 | 5.07e-20 | 76.6 |
| Msa0531010 | MtrunA17_Chr3g0089751 | 52.000 | 50 | 22 | 1 | 23 | 70 | 1 | 50 | 5.47e-12 | 57.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 49 sgRNAs with CRISPR-Local
Find 588 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGATGCTGGTTGCTTTAC+AGG | 0.100793 | 4_1:+5119949 | Msa0531010:CDS |
| GTCACTGTTGGTTCAAAATC+TGG | 0.220672 | 4_1:+5127548 | Msa0531010:three_prime_UTR |
| GTTGGTGATGTAGTAGTTTA+TGG | 0.260961 | 4_1:+5127470 | Msa0531010:three_prime_UTR |
| AAATCTGGTTTGAGTGTTCC+TGG | 0.302866 | 4_1:+5127563 | Msa0531010:three_prime_UTR |
| AGACATAATGATTCATTTGT+TGG | 0.316655 | 4_1:-5119903 | None:intergenic |
| AATTTACAGTCTAGAATAAT+AGG | 0.324071 | 4_1:-5127434 | None:intergenic |
| GTTGGTCAGAGAGCTGTTCT+AGG | 0.326408 | 4_1:-5119885 | None:intergenic |
| CCAGTGTCGGCGGAAGCACT+TGG | 0.388532 | 4_1:+5127296 | Msa0531010:CDS |
| TGTGGTTAATTGCATTAATA+CGG | 0.397135 | 4_1:+5127388 | Msa0531010:three_prime_UTR |
| CGGAAGCACTTGGGGTTAGA+TGG | 0.424659 | 4_1:+5127306 | Msa0531010:CDS |
| TCAGTGTTGGCGGAAGCACT+TGG | 0.439691 | 4_1:+5120060 | Msa0531010:CDS |
| GTTTGAGTGTTCCTGGCTGT+TGG | 0.458502 | 4_1:+5127570 | Msa0531010:three_prime_UTR |
| CAGTGTTGGCGGAAGCACTT+GGG | 0.460580 | 4_1:+5120061 | Msa0531010:CDS |
| CCAAGTGCTTCCGCCGACAC+TGG | 0.481678 | 4_1:-5127296 | None:intergenic |
| TCGATGGATTTGAGAATGTA+TGG | 0.482915 | 4_1:+5118038 | None:intergenic |
| CGACACTGGATCAATTTCAA+TGG | 0.484539 | 4_1:-5127282 | None:intergenic |
| CAGTGTCGGCGGAAGCACTT+GGG | 0.485653 | 4_1:+5127297 | Msa0531010:CDS |
| AAAATTGCACCACACCAGAT+TGG | 0.488889 | 4_1:-5120005 | None:intergenic |
| AAAATTGCACCACACCAGAT+TGG | 0.488889 | 4_1:-5127241 | None:intergenic |
| GTCTAGAATAATAGGATCAA+TGG | 0.490603 | 4_1:-5127426 | None:intergenic |
| TACAGGTGGTATAGCTGCAT+GGG | 0.491767 | 4_1:+5119966 | Msa0531010:CDS |
| ATGGTTGCTTATAACCAATC+TGG | 0.492558 | 4_1:+5119991 | Msa0531010:CDS |
| ATGGTTGCTTATAACCAATC+TGG | 0.492558 | 4_1:+5127227 | Msa0531010:CDS |
| TTGTCTTAGTCTGTCACTGT+TGG | 0.501023 | 4_1:+5127536 | Msa0531010:three_prime_UTR |
| TGAAATTGATTCAGTGTTGG+CGG | 0.517755 | 4_1:+5120050 | Msa0531010:CDS |
| TACAGGTGGTATAACTGCAT+GGG | 0.530722 | 4_1:+5127202 | Msa0531010:intron |
| TGGTATAGCTGCATGGGGAA+TGG | 0.533758 | 4_1:+5119972 | Msa0531010:CDS |
| AAGCAATAGCAATACTCTAC+AGG | 0.534860 | 4_1:-5127352 | None:intergenic |
| CAACACTGAATCAATTTCAA+TGG | 0.536676 | 4_1:-5120046 | None:intergenic |
| ATTAACCACAGTTTCAGCAT+TGG | 0.543232 | 4_1:-5127375 | None:intergenic |
| CATTGAAATTGATTCAGTGT+TGG | 0.546286 | 4_1:+5120047 | Msa0531010:CDS |
| TGGTATAACTGCATGGGGAA+TGG | 0.551005 | 4_1:+5127208 | Msa0531010:CDS |
| TTACAGGTGGTATAACTGCA+TGG | 0.576755 | 4_1:+5127201 | Msa0531010:intron |
| TTACAGGTGGTATAGCTGCA+TGG | 0.578550 | 4_1:+5119965 | Msa0531010:CDS |
| CATTAATACGGAATTGAGTG+TGG | 0.583254 | 4_1:+5127400 | Msa0531010:three_prime_UTR |
| AAATTACTTATGAGTCATGT+TGG | 0.583933 | 4_1:+5127452 | Msa0531010:three_prime_UTR |
| TGCTTCCAATGCTGAAACTG+TGG | 0.590669 | 4_1:+5127370 | Msa0531010:three_prime_UTR |
| ACAGTATCAAACCAACAGCC+AGG | 0.604391 | 4_1:-5127581 | None:intergenic |
| GATGCTGGTTGCTTTACAGG+TGG | 0.621302 | 4_1:+5119952 | Msa0531010:CDS |
| TGCTTATAACCAATCTGGTG+TGG | 0.621838 | 4_1:+5119996 | Msa0531010:CDS |
| TGCTTATAACCAATCTGGTG+TGG | 0.621838 | 4_1:+5127232 | Msa0531010:CDS |
| CAGACTAAGACAAAACAGCT+AGG | 0.630550 | 4_1:-5127526 | None:intergenic |
| AGTGTTGGCGGAAGCACTTG+GGG | 0.630922 | 4_1:+5120062 | Msa0531010:CDS |
| CATTGAAATTGATCCAGTGT+CGG | 0.635782 | 4_1:+5127283 | Msa0531010:CDS |
| AGTGTCGGCGGAAGCACTTG+GGG | 0.638389 | 4_1:+5127298 | Msa0531010:CDS |
| TGAAATTGATCCAGTGTCGG+CGG | 0.646558 | 4_1:+5127286 | Msa0531010:CDS |
| ACAGGTGGTATAACTGCATG+GGG | 0.654389 | 4_1:+5127203 | Msa0531010:intron |
| TAATACGGAATTGAGTGTGG+CGG | 0.680911 | 4_1:+5127403 | Msa0531010:three_prime_UTR |
| ACAGGTGGTATAGCTGCATG+GGG | 0.693519 | 4_1:+5119967 | Msa0531010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATAATAAATATGGA+AGG | - | chr4_1:5125404-5125423 | None:intergenic | 10.0% |
| !! | TTGCAAATATATAATAAATA+TGG | - | chr4_1:5125408-5125427 | None:intergenic | 10.0% |
| !! | ATATTATGCATAAATTATAT+GGG | - | chr4_1:5125798-5125817 | None:intergenic | 10.0% |
| !! | TTAATTACTATTAAAATGAA+GGG | - | chr4_1:5126740-5126759 | None:intergenic | 10.0% |
| !! | ATTAATTACTATTAAAATGA+AGG | - | chr4_1:5126739-5126758 | None:intergenic | 10.0% |
| !!! | TTCATTTTAATAGTAATTAA+TGG | + | chr4_1:5126229-5126248 | Msa0531010:intron | 10.0% |
| !!! | TTAATTGATAATAATTGTTA+TGG | + | chr4_1:5126258-5126277 | Msa0531010:intron | 10.0% |
| !!! | TTAATTGATAATAATTGTTA+TGG | - | chr4_1:5126258-5126277 | None:intergenic | 10.0% |
| !!! | TTCATTTTAATAGTAATTAA+TGG | - | chr4_1:5126229-5126248 | None:intergenic | 10.0% |
| !! | ATTAATTACTATTAAAATGA+AGG | + | chr4_1:5126739-5126758 | Msa0531010:intron | 10.0% |
| !! | TTAATTACTATTAAAATGAA+GGG | + | chr4_1:5126740-5126759 | Msa0531010:intron | 10.0% |
| !! | TATATATATATATATGAGAA+GGG | - | chr4_1:5126813-5126832 | None:intergenic | 10.0% |
| !! | ATATATATATATATATGAGA+AGG | - | chr4_1:5126814-5126833 | None:intergenic | 10.0% |
| !! | ATAAACATTATCATTAGAAA+CGG | - | chr4_1:5118102-5118121 | None:intergenic | 15.0% |
| !!! | TTGTATTTTTTTCATCATAA+AGG | + | chr4_1:5118895-5118914 | Msa0531010:intron | 15.0% |
| !!! | TGTATTTTTTTCATCATAAA+GGG | + | chr4_1:5118896-5118915 | Msa0531010:intron | 15.0% |
| !! | AATATGATATAAAAGAGAAT+GGG | - | chr4_1:5119034-5119053 | None:intergenic | 15.0% |
| !! | GATATTATGCATAATTATAT+GGG | - | chr4_1:5119311-5119330 | None:intergenic | 15.0% |
| !! | TTCTTATTCATTAAAAAAAC+TGG | + | chr4_1:5119831-5119850 | Msa0531010:intron | 15.0% |
| !! | TCTTATTCATTAAAAAAACT+GGG | + | chr4_1:5119832-5119851 | Msa0531010:intron | 15.0% |
| !! | TTATGAAATATGATGTTTAT+AGG | + | chr4_1:5119862-5119881 | Msa0531010:intron | 15.0% |
| !! | AAAATAAAAATCATATGACA+GGG | - | chr4_1:5120501-5120520 | None:intergenic | 15.0% |
| !! | AAAAATAAAAATCATATGAC+AGG | - | chr4_1:5120502-5120521 | None:intergenic | 15.0% |
| !!! | TTAATTTTTGTTTATCCAAT+TGG | + | chr4_1:5120782-5120801 | Msa0531010:intron | 15.0% |
| !!! | TTTGACTATGTTTTAATTTT+AGG | - | chr4_1:5121519-5121538 | None:intergenic | 15.0% |
| !!! | GATTAAAAAGTATTTTATGT+TGG | + | chr4_1:5121717-5121736 | Msa0531010:intron | 15.0% |
| !! | AGGATAATATTAGTAAAATA+AGG | + | chr4_1:5121776-5121795 | Msa0531010:intron | 15.0% |
| !! | GGATAAAAATAAAAACAAAT+GGG | - | chr4_1:5122745-5122764 | None:intergenic | 15.0% |
| !! | AAATTAGTAGTATTAATTAG+GGG | - | chr4_1:5122825-5122844 | None:intergenic | 15.0% |
| !! | CAAATTAGTAGTATTAATTA+GGG | - | chr4_1:5122826-5122845 | None:intergenic | 15.0% |
| !! | ACAAATTAGTAGTATTAATT+AGG | - | chr4_1:5122827-5122846 | None:intergenic | 15.0% |
| !! | ATAATTACTATCATAATTGA+AGG | - | chr4_1:5123796-5123815 | None:intergenic | 15.0% |
| !! | TTCAATTATGATAGTAATTA+TGG | + | chr4_1:5123795-5123814 | Msa0531010:intron | 15.0% |
| !! | TCAATTATGATAGTAATTAT+GGG | + | chr4_1:5123796-5123815 | Msa0531010:intron | 15.0% |
| !!! | ATTTTTTTTTCATCGTAATA+TGG | + | chr4_1:5124722-5124741 | Msa0531010:intron | 15.0% |
| !! | TAAAAAAGATTAATAAAGCA+TGG | - | chr4_1:5125222-5125241 | None:intergenic | 15.0% |
| !! | GATATTATGCATAAATTATA+TGG | - | chr4_1:5125799-5125818 | None:intergenic | 15.0% |
| !! | TATAAAAAGAATTGAGTAAT+TGG | + | chr4_1:5126042-5126061 | Msa0531010:intron | 15.0% |
| !! | AAAATTAAAGATTGAAATTG+AGG | - | chr4_1:5126393-5126412 | None:intergenic | 15.0% |
| !!! | TTTTTCAATTGATTAATGAA+TGG | + | chr4_1:5126510-5126529 | Msa0531010:intron | 15.0% |
| !! | ATATATATATATAGCTTGAA+TGG | + | chr4_1:5126900-5126919 | Msa0531010:intron | 15.0% |
| !!! | GTAAATGTTTTTTTTTAACA+CGG | + | chr4_1:5126947-5126966 | Msa0531010:intron | 15.0% |
| !! | GAAAATAATGATTTATTTGT+TGG | - | chr4_1:5127145-5127164 | None:intergenic | 15.0% |
| !!! | TTGTTTTTATCATGATTATG+AGG | + | chr4_1:5118241-5118260 | Msa0531010:intron | 20.0% |
| !!! | CATTTTCCATATAACAAAAT+CGG | - | chr4_1:5118270-5118289 | None:intergenic | 20.0% |
| !! | AAATTTAGCTATCAGAATAT+TGG | + | chr4_1:5118329-5118348 | Msa0531010:intron | 20.0% |
| !! | ATTGGAATGAATTATAACTT+TGG | + | chr4_1:5118347-5118366 | Msa0531010:intron | 20.0% |
| !! | AAATATTGTTATAGTTGGTT+GGG | - | chr4_1:5118988-5119007 | None:intergenic | 20.0% |
| !! | TTGAGAAATATTGTTATAGT+TGG | - | chr4_1:5118993-5119012 | None:intergenic | 20.0% |
| !! | GAATATGATATAAAAGAGAA+TGG | - | chr4_1:5119035-5119054 | None:intergenic | 20.0% |
| !! | TCAAGCACTTATATTATATT+AGG | + | chr4_1:5119128-5119147 | Msa0531010:intron | 20.0% |
| !! | TAAACTGTCTAAATCAATTA+TGG | - | chr4_1:5119199-5119218 | None:intergenic | 20.0% |
| !!! | ATAATTGATTTAGACAGTTT+AGG | + | chr4_1:5119198-5119217 | Msa0531010:intron | 20.0% |
| !!! | TAATTGATTTAGACAGTTTA+GGG | + | chr4_1:5119199-5119218 | Msa0531010:intron | 20.0% |
| !! | TATTATTACTATCTTACTGA+AGG | + | chr4_1:5119234-5119253 | Msa0531010:intron | 20.0% |
| !! | GGATATTATGCATAATTATA+TGG | - | chr4_1:5119312-5119331 | None:intergenic | 20.0% |
| !!! | AATATCCCATTTTCTATATT+TGG | + | chr4_1:5119325-5119344 | Msa0531010:intron | 20.0% |
| !! | AGATACTATACTATTCAAAT+TGG | + | chr4_1:5119375-5119394 | Msa0531010:intron | 20.0% |
| !! | AGTTTATGAGAATGAAAATT+TGG | + | chr4_1:5119399-5119418 | Msa0531010:intron | 20.0% |
| !! | AATTCTTTCACAATAAAAGT+TGG | - | chr4_1:5119756-5119775 | None:intergenic | 20.0% |
| !!! | CTTTTATTGTGAAAGAATTT+AGG | + | chr4_1:5119757-5119776 | Msa0531010:intron | 20.0% |
| !! | AATTTACAATCATGAATACA+AGG | - | chr4_1:5120179-5120198 | None:intergenic | 20.0% |
| !!! | TAAGAAAGTATTCTATCAAA+TGG | - | chr4_1:5120555-5120574 | None:intergenic | 20.0% |
| !!! | TTTATTGCTACTTTTTTGTT+CGG | - | chr4_1:5120912-5120931 | None:intergenic | 20.0% |
| !! | TATGTATGAAATATTGAGTA+AGG | - | chr4_1:5121373-5121392 | None:intergenic | 20.0% |
| !!! | TTTATGTTGGACTTTAATTT+TGG | + | chr4_1:5121730-5121749 | Msa0531010:intron | 20.0% |
| !!! | TTATGTTGGACTTTAATTTT+GGG | + | chr4_1:5121731-5121750 | Msa0531010:intron | 20.0% |
| !! | AATATTAGTAAAATAAGGAG+TGG | + | chr4_1:5121781-5121800 | Msa0531010:intron | 20.0% |
| !! | ATATTAGTAAAATAAGGAGT+GGG | + | chr4_1:5121782-5121801 | Msa0531010:intron | 20.0% |
| !! | ATTGGATTAACTAGATTAAA+CGG | - | chr4_1:5122147-5122166 | None:intergenic | 20.0% |
| !! | CAAATGTAGAGATATATAAA+AGG | + | chr4_1:5122439-5122458 | Msa0531010:intron | 20.0% |
| !! | TAAAAATAAAAACAAATGGG+TGG | - | chr4_1:5122742-5122761 | None:intergenic | 20.0% |
| !! | GGGATAAAAATAAAAACAAA+TGG | - | chr4_1:5122746-5122765 | None:intergenic | 20.0% |
| !! | AAATAGAAAAGATAAGAGTA+TGG | - | chr4_1:5123435-5123454 | None:intergenic | 20.0% |
| !! | CAATTATGATAGTAATTATG+GGG | + | chr4_1:5123797-5123816 | Msa0531010:intron | 20.0% |
| !! | AACATTATTATCATTCGAAA+CGG | - | chr4_1:5123961-5123980 | None:intergenic | 20.0% |
| !!! | TTGTTTTTATCATGATTATG+AGG | + | chr4_1:5118241-5118260 | Msa0531010:intron | 20.0% |
| !!! | TGTTTTTATCATGATTATGA+GGG | + | chr4_1:5118242-5118261 | Msa0531010:intron | 20.0% |
| !!! | CATTTTCCATATAACAAAAT+CGG | - | chr4_1:5118270-5118289 | None:intergenic | 20.0% |
| !! | ATGAATTATCAATTTGAACT+TGG | + | chr4_1:5124215-5124234 | Msa0531010:intron | 20.0% |
| !! | AAAAAGAATAAATACACACA+AGG | - | chr4_1:5124778-5124797 | None:intergenic | 20.0% |
| !!! | TGTTCTAGTTAAGATATTAT+TGG | + | chr4_1:5124956-5124975 | Msa0531010:intron | 20.0% |
| !! | AATGATATGACACTAATATT+TGG | + | chr4_1:5125156-5125175 | Msa0531010:intron | 20.0% |
| !!! | TACTGAAACTAAATTAGTTT+AGG | - | chr4_1:5125301-5125320 | None:intergenic | 20.0% |
| !! | GAGTTAATATTTAATGCAAT+TGG | + | chr4_1:5125837-5125856 | Msa0531010:intron | 20.0% |
| !! | AATATTTAATGCAATTGGTT+TGG | + | chr4_1:5125842-5125861 | Msa0531010:intron | 20.0% |
| !!! | AGTTTACGAGAAATTTTTTT+TGG | + | chr4_1:5125887-5125906 | Msa0531010:intron | 20.0% |
| !! | AAATTATTGCACATTAAAGT+TGG | - | chr4_1:5127003-5127022 | None:intergenic | 20.0% |
| !!! | CTTTAATGTGCAATAATTTT+AGG | + | chr4_1:5127004-5127023 | Msa0531010:intron | 20.0% |
| !!! | AATTTACAGTCTAGAATAAT+AGG | - | chr4_1:5127437-5127456 | None:intergenic | 20.0% |
| !!! | CGATTTTGTTATATGGAAAA+TGG | + | chr4_1:5118268-5118287 | Msa0531010:intron | 25.0% |
| ! | ATATGGAAAATGGAAGAATT+TGG | + | chr4_1:5118278-5118297 | Msa0531010:intron | 25.0% |
| ! | AATTTGGAAATGAAAAGTCT+TGG | + | chr4_1:5118294-5118313 | Msa0531010:intron | 25.0% |
| ! | GAAATATTGTTATAGTTGGT+TGG | - | chr4_1:5118989-5119008 | None:intergenic | 25.0% |
| !! | TTTTATATCATATTCCCTCT+AGG | + | chr4_1:5119040-5119059 | Msa0531010:intron | 25.0% |
| ! | TACTAGTTAAATAAGCTTCA+CGG | + | chr4_1:5119263-5119282 | Msa0531010:intron | 25.0% |
| ! | TGCATAATTATATGGGTTTA+AGG | - | chr4_1:5119304-5119323 | None:intergenic | 25.0% |
| ! | TTAAGCATATATAGCTAGAA+TGG | + | chr4_1:5119677-5119696 | Msa0531010:intron | 25.0% |
| ! | TTGTGAAAGAATTTAGGTAA+AGG | + | chr4_1:5119763-5119782 | Msa0531010:intron | 25.0% |
| ! | AGACATAATGATTCATTTGT+TGG | - | chr4_1:5119906-5119925 | None:intergenic | 25.0% |
| ! | AAATTACTTAAGACTCATGT+TGG | + | chr4_1:5120194-5120213 | Msa0531010:intron | 25.0% |
| ! | TGTTGAATGAGAAGTTTATT+TGG | + | chr4_1:5120434-5120453 | Msa0531010:intron | 25.0% |
| ! | TAGAATACTTTCTTATCCAT+TGG | + | chr4_1:5120616-5120635 | Msa0531010:intron | 25.0% |
| !!! | ATCCAATTGGTCTTTTTTAT+TGG | + | chr4_1:5120795-5120814 | Msa0531010:intron | 25.0% |
| !!! | TCCAATTGGTCTTTTTTATT+GGG | + | chr4_1:5120796-5120815 | Msa0531010:intron | 25.0% |
| !!! | TTATTGCTACTTTTTTGTTC+GGG | - | chr4_1:5120911-5120930 | None:intergenic | 25.0% |
| ! | CAAAAATGTAACAATTGTTG+TGG | - | chr4_1:5120985-5121004 | None:intergenic | 25.0% |
| !!! | AATGATGGATGAATGAATTT+TGG | - | chr4_1:5121400-5121419 | None:intergenic | 25.0% |
| !!! | AAGTTGTTTTTGAAGAATGA+TGG | - | chr4_1:5121415-5121434 | None:intergenic | 25.0% |
| ! | TATTAGTAAAATAAGGAGTG+GGG | + | chr4_1:5121783-5121802 | Msa0531010:intron | 25.0% |
| ! | AAAAAATATCTGACCTTGTT+TGG | - | chr4_1:5121914-5121933 | None:intergenic | 25.0% |
| !!! | AACAAGGTCAGATATTTTTT+CGG | + | chr4_1:5121914-5121933 | Msa0531010:intron | 25.0% |
| ! | AATGAAATTAACATAGCCAT+TGG | + | chr4_1:5122078-5122097 | Msa0531010:intron | 25.0% |
| !!! | TACAATTTTGATTGATCCAA+TGG | - | chr4_1:5122097-5122116 | None:intergenic | 25.0% |
| ! | TAGATTAAACGGTTCATATT+AGG | - | chr4_1:5122136-5122155 | None:intergenic | 25.0% |
| ! | TGTTTGAACATTGAGATTAT+TGG | - | chr4_1:5122165-5122184 | None:intergenic | 25.0% |
| ! | TGTGTCTAGTAATTTGAAAA+GGG | - | chr4_1:5122779-5122798 | None:intergenic | 25.0% |
| ! | ATGTGTCTAGTAATTTGAAA+AGG | - | chr4_1:5122780-5122799 | None:intergenic | 25.0% |
| ! | AAGAAATGTGAAAAATGCAA+AGG | + | chr4_1:5122950-5122969 | Msa0531010:intron | 25.0% |
| ! | TGCAAAGGAAAATTACATTA+AGG | + | chr4_1:5122965-5122984 | Msa0531010:intron | 25.0% |
| ! | GCAAAGGAAAATTACATTAA+GGG | + | chr4_1:5122966-5122985 | Msa0531010:intron | 25.0% |
| ! | AAAATTACATTAAGGGATAG+AGG | + | chr4_1:5122973-5122992 | Msa0531010:intron | 25.0% |
| ! | AAATTACATTAAGGGATAGA+GGG | + | chr4_1:5122974-5122993 | Msa0531010:intron | 25.0% |
| !!! | AGGGAGTATTATTTTATCTT+TGG | + | chr4_1:5122993-5123012 | Msa0531010:intron | 25.0% |
| ! | GAATGAAGAATGAGAAATTA+GGG | - | chr4_1:5123373-5123392 | None:intergenic | 25.0% |
| ! | TGAATGAAGAATGAGAAATT+AGG | - | chr4_1:5123374-5123393 | None:intergenic | 25.0% |
| !!! | TTTTCGAGTAAATGATTAAC+GGG | - | chr4_1:5123501-5123520 | None:intergenic | 25.0% |
| !!! | GTTTTCGAGTAAATGATTAA+CGG | - | chr4_1:5123502-5123521 | None:intergenic | 25.0% |
| !! | CAATCATATATGGTGTTTTT+GGG | + | chr4_1:5123722-5123741 | Msa0531010:intron | 25.0% |
| ! | TAATTCAACCAACACTTATA+AGG | + | chr4_1:5123764-5123783 | Msa0531010:intron | 25.0% |
| !!! | TTGATGGATTCAAGAATATA+TGG | + | chr4_1:5123897-5123916 | Msa0531010:intron | 25.0% |
| !!! | ATTTTAGTTCTACTGTCAAT+TGG | + | chr4_1:5123928-5123947 | Msa0531010:intron | 25.0% |
| !!! | TTTTAGTTCTACTGTCAATT+GGG | + | chr4_1:5123929-5123948 | Msa0531010:intron | 25.0% |
| ! | TTCGTTAACACACAAATATT+TGG | - | chr4_1:5124077-5124096 | None:intergenic | 25.0% |
| !! | GTTTTTATCATGATTATGAG+GGG | + | chr4_1:5118243-5118262 | Msa0531010:intron | 25.0% |
| !!! | CGATTTTGTTATATGGAAAA+TGG | + | chr4_1:5118268-5118287 | Msa0531010:intron | 25.0% |
| ! | ATATGGAAAATGGAAGAATT+TGG | + | chr4_1:5118278-5118297 | Msa0531010:intron | 25.0% |
| ! | AATTTGGAAATGAAAAGTCT+TGG | + | chr4_1:5118294-5118313 | Msa0531010:intron | 25.0% |
| ! | AAATTTAGCTATCAGAATCT+TGG | + | chr4_1:5124191-5124210 | Msa0531010:intron | 25.0% |
| ! | AATTCAAACAAGTACATAGT+TGG | - | chr4_1:5124448-5124467 | None:intergenic | 25.0% |
| ! | TTTATATTGATGCATGTACT+TGG | + | chr4_1:5124466-5124485 | Msa0531010:intron | 25.0% |
| ! | ACTTATTTCCAAAAACATCA+TGG | - | chr4_1:5124620-5124639 | None:intergenic | 25.0% |
| !!! | ATACCTGTTTTATTGCATTA+TGG | + | chr4_1:5124676-5124695 | Msa0531010:intron | 25.0% |
| ! | ATCAAATCCAACAATATTGA+TGG | + | chr4_1:5124869-5124888 | Msa0531010:intron | 25.0% |
| ! | CTTATCATTGCTAAATAACT+TGG | + | chr4_1:5125028-5125047 | Msa0531010:intron | 25.0% |
| ! | AAAACAAGTGAAAATCTTAC+AGG | + | chr4_1:5125113-5125132 | Msa0531010:intron | 25.0% |
| ! | AGAAAGAGAAATAAATCCTT+AGG | - | chr4_1:5125492-5125511 | None:intergenic | 25.0% |
| ! | TCTCTTTCTTGATGAAATTA+TGG | + | chr4_1:5125503-5125522 | Msa0531010:intron | 25.0% |
| ! | ATATTTGGTTAGAAGGATAT+CGG | - | chr4_1:5125587-5125606 | None:intergenic | 25.0% |
| ! | TATCCTTCTAACCAAATATT+AGG | + | chr4_1:5125588-5125607 | Msa0531010:intron | 25.0% |
| ! | GAGTAATAACACCTAATATT+TGG | - | chr4_1:5125602-5125621 | None:intergenic | 25.0% |
| ! | AATATAGGTGAAAAACTACA+TGG | - | chr4_1:5125639-5125658 | None:intergenic | 25.0% |
| ! | TCACAAATCAAGTTAGTTAT+CGG | - | chr4_1:5125713-5125732 | None:intergenic | 25.0% |
| !!! | TAACTAACTTGATTTGTGAT+AGG | + | chr4_1:5125714-5125733 | Msa0531010:intron | 25.0% |
| ! | TGCATAAATTATATGGGTTT+AGG | - | chr4_1:5125792-5125811 | None:intergenic | 25.0% |
| ! | AATATTAACTCACCAAGTAT+GGG | - | chr4_1:5125828-5125847 | None:intergenic | 25.0% |
| ! | AAATATTAACTCACCAAGTA+TGG | - | chr4_1:5125829-5125848 | None:intergenic | 25.0% |
| ! | TGATAATAATTGTTATGGTG+AGG | + | chr4_1:5126263-5126282 | Msa0531010:intron | 25.0% |
| ! | GATAATAATTGTTATGGTGA+GGG | + | chr4_1:5126264-5126283 | Msa0531010:intron | 25.0% |
| ! | TAAAGATTGAAATTGAGGAA+TGG | - | chr4_1:5126388-5126407 | None:intergenic | 25.0% |
| ! | TTTCATGGAAATGAAATTCA+TGG | + | chr4_1:5126478-5126497 | Msa0531010:intron | 25.0% |
| ! | TTCATGGAAATGAAATTCAT+GGG | + | chr4_1:5126479-5126498 | Msa0531010:intron | 25.0% |
| ! | GATAATAATTGTTATGGTGA+GGG | - | chr4_1:5126264-5126283 | None:intergenic | 25.0% |
| ! | TGATAATAATTGTTATGGTG+AGG | - | chr4_1:5126263-5126282 | None:intergenic | 25.0% |
| !!! | TGTGCAATAATTTTAGGTAA+AGG | + | chr4_1:5127010-5127029 | Msa0531010:intron | 25.0% |
| ! | TGTTCATTAAAAAACTATGC+AGG | + | chr4_1:5127073-5127092 | Msa0531010:intron | 25.0% |
| ! | TGTGGTTAATTGCATTAATA+CGG | + | chr4_1:5127388-5127407 | Msa0531010:three_prime_UTR | 25.0% |
| ! | AAATTACTTATGAGTCATGT+TGG | + | chr4_1:5127452-5127471 | Msa0531010:three_prime_UTR | 25.0% |
| !!! | ATTTTAGTTCTACTGTGAAC+TGG | + | chr4_1:5118069-5118088 | Msa0531010:intron | 30.0% |
| !!! | TTTTAGTTCTACTGTGAACT+GGG | + | chr4_1:5118070-5118089 | Msa0531010:intron | 30.0% |
| AACATTATCATTAGAAACGG+TGG | - | chr4_1:5118099-5118118 | None:intergenic | 30.0% | |
| ATGAATTATAACTTTGGACC+TGG | + | chr4_1:5118353-5118372 | Msa0531010:intron | 30.0% | |
| AATTCAAACAAGTACATCGT+TGG | - | chr4_1:5118586-5118605 | None:intergenic | 30.0% | |
| TTTATATTGATGTGTGTGCT+TGG | + | chr4_1:5118604-5118623 | Msa0531010:intron | 30.0% | |
| CTTCATTCGAAAAACATCAT+GGG | - | chr4_1:5118757-5118776 | None:intergenic | 30.0% | |
| ACTTCATTCGAAAAACATCA+TGG | - | chr4_1:5118758-5118777 | None:intergenic | 30.0% | |
| AATAGCAGAATGTCATTATC+GGG | - | chr4_1:5118796-5118815 | None:intergenic | 30.0% | |
| CAATAGCAGAATGTCATTAT+CGG | - | chr4_1:5118797-5118816 | None:intergenic | 30.0% | |
| ATTTAGCACAAATGACACAA+CGG | - | chr4_1:5118835-5118854 | None:intergenic | 30.0% | |
| ATACCGCTATTATTGCATTA+TGG | + | chr4_1:5118853-5118872 | Msa0531010:intron | 30.0% | |
| CTACCATAATGCAATAATAG+CGG | - | chr4_1:5118859-5118878 | None:intergenic | 30.0% | |
| TTTCATCATAAAGGGAAAAG+AGG | + | chr4_1:5118904-5118923 | Msa0531010:intron | 30.0% | |
| TGATATAAAAGAGAATGGGA+GGG | - | chr4_1:5119030-5119049 | None:intergenic | 30.0% | |
| ATGATATAAAAGAGAATGGG+AGG | - | chr4_1:5119031-5119050 | None:intergenic | 30.0% | |
| TTCTTAGCGTATGTTATAGT+CGG | + | chr4_1:5119159-5119178 | Msa0531010:intron | 30.0% | |
| CCTCACCAAATATAGAAAAT+GGG | - | chr4_1:5119333-5119352 | None:intergenic | 30.0% | |
| ACCTCACCAAATATAGAAAA+TGG | - | chr4_1:5119334-5119353 | None:intergenic | 30.0% | |
| !! | CAATGAGGTTGATGAAATTA+TGG | + | chr4_1:5119488-5119507 | Msa0531010:intron | 30.0% |
| ACTGAACAAAGCTTAGATTT+AGG | + | chr4_1:5119574-5119593 | Msa0531010:intron | 30.0% | |
| GTACATAATAATCTCGTTGT+TGG | + | chr4_1:5119615-5119634 | Msa0531010:intron | 30.0% | |
| ! | GTTGGTAAAAGTTTCATCAT+TGG | + | chr4_1:5119633-5119652 | Msa0531010:intron | 30.0% |
| !! | AAAGTTTCATCATTGGTTTC+TGG | + | chr4_1:5119640-5119659 | Msa0531010:intron | 30.0% |
| ATTCATTAAAAAAACTGGGC+AGG | + | chr4_1:5119836-5119855 | Msa0531010:intron | 30.0% | |
| !!! | TTCTTGTTTTTTGTTGATGC+TGG | + | chr4_1:5119937-5119956 | Msa0531010:CDS | 30.0% |
| CAACACTGAATCAATTTCAA+TGG | - | chr4_1:5120049-5120068 | None:intergenic | 30.0% | |
| ! | CATTGAAATTGATTCAGTGT+TGG | + | chr4_1:5120047-5120066 | Msa0531010:CDS | 30.0% |
| TAATATGGAATTGAGTGTGT+TGG | + | chr4_1:5120145-5120164 | Msa0531010:intron | 30.0% | |
| ATCATGAATACAAGGTTCAA+TGG | - | chr4_1:5120171-5120190 | None:intergenic | 30.0% | |
| AGTCTCTTGGTTTAAAAACA+TGG | + | chr4_1:5120285-5120304 | Msa0531010:intron | 30.0% | |
| ! | AAATGAGTTTGAGTTTAGCT+TGG | + | chr4_1:5120403-5120422 | Msa0531010:intron | 30.0% |
| ACTGTACTCTTTAACCTTAA+TGG | + | chr4_1:5120462-5120481 | Msa0531010:intron | 30.0% | |
| CTCTTTAACCTTAATGGTTT+AGG | + | chr4_1:5120468-5120487 | Msa0531010:intron | 30.0% | |
| GTATCAAACCTAAACCATTA+AGG | - | chr4_1:5120479-5120498 | None:intergenic | 30.0% | |
| !!! | TATTAGTTTTTGAGACTCGT+TGG | + | chr4_1:5120575-5120594 | Msa0531010:intron | 30.0% |
| AATAGCTTAACACTGAGATA+TGG | - | chr4_1:5120702-5120721 | None:intergenic | 30.0% | |
| TCCCAATAAAAAAGACCAAT+TGG | - | chr4_1:5120800-5120819 | None:intergenic | 30.0% | |
| !!! | GGTGTTTTTTTGTTTGCTTT+GGG | - | chr4_1:5120890-5120909 | None:intergenic | 30.0% |
| AGAATTCGAAAGATAAAGAG+AGG | + | chr4_1:5121023-5121042 | Msa0531010:intron | 30.0% | |
| !! | AAGAGAGGACTTTTTCTTAA+AGG | + | chr4_1:5121038-5121057 | Msa0531010:intron | 30.0% |
| !! | AGAGAGGACTTTTTCTTAAA+GGG | + | chr4_1:5121039-5121058 | Msa0531010:intron | 30.0% |
| AATGATGCATGTATGTATCA+TGG | - | chr4_1:5121463-5121482 | None:intergenic | 30.0% | |
| TAATGATGAGAGAAAGTGAA+TGG | + | chr4_1:5121695-5121714 | Msa0531010:intron | 30.0% | |
| !!! | GATATTTTTTCGGTTTGGTT+CGG | + | chr4_1:5121924-5121943 | Msa0531010:intron | 30.0% |
| ! | CTCCTTGTATTTTACTCTTT+CGG | - | chr4_1:5122024-5122043 | None:intergenic | 30.0% |
| TGACAAATGAGTAAAACATC+TGG | + | chr4_1:5122209-5122228 | Msa0531010:intron | 30.0% | |
| ! | AGTAAAACATCTGGTGTTAA+CGG | + | chr4_1:5122218-5122237 | Msa0531010:intron | 30.0% |
| TCGTGTGAAGATAAATGAAA+AGG | - | chr4_1:5122375-5122394 | None:intergenic | 30.0% | |
| TTGTAAACGATGTTTGGAAA+AGG | - | chr4_1:5122489-5122508 | None:intergenic | 30.0% | |
| GAGAATTTGTAAACGATGTT+TGG | - | chr4_1:5122495-5122514 | None:intergenic | 30.0% | |
| ! | GCATTTAGAGTTCAATTGAA+TGG | - | chr4_1:5122536-5122555 | None:intergenic | 30.0% |
| ATGACTTACATATTTAAGCG+AGG | - | chr4_1:5122622-5122641 | None:intergenic | 30.0% | |
| TTGAAAAGGGGTTACATTTA+GGG | - | chr4_1:5122766-5122785 | None:intergenic | 30.0% | |
| TTTGAAAAGGGGTTACATTT+AGG | - | chr4_1:5122767-5122786 | None:intergenic | 30.0% | |
| GTGTCTAGTAATTTGAAAAG+GGG | - | chr4_1:5122778-5122797 | None:intergenic | 30.0% | |
| CATACAGACAAAAGACAATT+TGG | + | chr4_1:5122877-5122896 | Msa0531010:intron | 30.0% | |
| GTTCTGATTGAAAATTGATC+AGG | - | chr4_1:5123201-5123220 | None:intergenic | 30.0% | |
| TCTGAATTAGAGATTTGACT+GGG | - | chr4_1:5123323-5123342 | None:intergenic | 30.0% | |
| ATCTGAATTAGAGATTTGAC+TGG | - | chr4_1:5123324-5123343 | None:intergenic | 30.0% | |
| ! | TTTCGAGTAAATGATTAACG+GGG | - | chr4_1:5123500-5123519 | None:intergenic | 30.0% |
| AATCTTTATCGTCGTTCAAA+CGG | - | chr4_1:5123557-5123576 | None:intergenic | 30.0% | |
| ATGAGAATAGAACAGTTATG+TGG | + | chr4_1:5123637-5123656 | Msa0531010:intron | 30.0% | |
| AGGACAATATCTGATCAATT+AGG | + | chr4_1:5123684-5123703 | Msa0531010:intron | 30.0% | |
| GGACAATATCTGATCAATTA+GGG | + | chr4_1:5123685-5123704 | Msa0531010:intron | 30.0% | |
| TGCATGATTGCAATCATATA+TGG | + | chr4_1:5123712-5123731 | Msa0531010:intron | 30.0% | |
| ! | GCAATCATATATGGTGTTTT+TGG | + | chr4_1:5123721-5123740 | Msa0531010:intron | 30.0% |
| !!! | TGTTTTTGGGATTTTGTGTT+TGG | + | chr4_1:5123735-5123754 | Msa0531010:intron | 30.0% |
| TTATGATAGTAATTATGGGG+AGG | + | chr4_1:5123800-5123819 | Msa0531010:intron | 30.0% | |
| !!! | GAGGTGAGAATTTTTAGTTT+CGG | + | chr4_1:5123819-5123838 | Msa0531010:intron | 30.0% |
| ! | TTAGTTTCGGTGATAATGTT+TGG | + | chr4_1:5123832-5123851 | Msa0531010:intron | 30.0% |
| TATCCAAAATTTACCTGTTG+CGG | + | chr4_1:5123860-5123879 | Msa0531010:intron | 30.0% | |
| ATGGATTCAAGAATATATGG+TGG | + | chr4_1:5123900-5123919 | Msa0531010:intron | 30.0% | |
| !!! | GTGATTTTTTCGCTTGATTT+AGG | + | chr4_1:5123990-5124009 | Msa0531010:intron | 30.0% |
| ! | GGCTTTAATTTCAAACACAA+GGG | - | chr4_1:5124242-5124261 | None:intergenic | 30.0% |
| !! | TGGCTTTAATTTCAAACACA+AGG | - | chr4_1:5124243-5124262 | None:intergenic | 30.0% |
| ! | AAGTACATCCATGATGTTTT+TGG | + | chr4_1:5124609-5124628 | Msa0531010:intron | 30.0% |
| CTACCATAATGCAATAAAAC+AGG | - | chr4_1:5124682-5124701 | None:intergenic | 30.0% | |
| ATGCATGATTCTTAAAAGTG+CGG | - | chr4_1:5124748-5124767 | None:intergenic | 30.0% | |
| ACATGTACCATCAATATTGT+TGG | - | chr4_1:5124879-5124898 | None:intergenic | 30.0% | |
| ! | CAATATTGATGGTACATGTT+AGG | + | chr4_1:5124880-5124899 | Msa0531010:intron | 30.0% |
| GGACTAACTACTAATACTAT+TGG | - | chr4_1:5125280-5125299 | None:intergenic | 30.0% | |
| ! | ATTGCACAGTTAATTAGCTT+AGG | - | chr4_1:5125330-5125349 | None:intergenic | 30.0% |
| TAAACCAAGAAAAATAGAGC+AGG | - | chr4_1:5125436-5125455 | None:intergenic | 30.0% | |
| TTTCTTCGTTATCTTTCCTA+AGG | + | chr4_1:5125473-5125492 | Msa0531010:intron | 30.0% | |
| ACACCTAATATTTGGTTAGA+AGG | - | chr4_1:5125594-5125613 | None:intergenic | 30.0% | |
| GAGTTAAGATACTCGAATAT+AGG | - | chr4_1:5125654-5125673 | None:intergenic | 30.0% | |
| !!! | TTTTTTTGGCATACTGAAGT+TGG | + | chr4_1:5125901-5125920 | Msa0531010:intron | 30.0% |
| AATAAAATGAGACCTTAACC+AGG | - | chr4_1:5125954-5125973 | None:intergenic | 30.0% | |
| ! | GGTTAAGGTCTCATTTTATT+AGG | + | chr4_1:5125954-5125973 | Msa0531010:intron | 30.0% |
| GGTTGAGGTTAATGAAATTA+TGG | + | chr4_1:5125975-5125994 | Msa0531010:intron | 30.0% | |
| TGAAATCTAGATGAAGTGAT+GGG | + | chr4_1:5126008-5126027 | Msa0531010:intron | 30.0% | |
| ATTGGACAAAGCATAGATTT+AGG | + | chr4_1:5126060-5126079 | Msa0531010:intron | 30.0% | |
| TAAAATGAAGGGTCATGATT+TGG | - | chr4_1:5126751-5126770 | None:intergenic | 30.0% | |
| AGACTTGTGAAATTGAAAGA+AGG | - | chr4_1:5126299-5126318 | None:intergenic | 30.0% | |
| ATAGAAGAATTAAGCGCATT+GGG | - | chr4_1:5126332-5126351 | None:intergenic | 30.0% | |
| AATAGAAGAATTAAGCGCAT+TGG | - | chr4_1:5126333-5126352 | None:intergenic | 30.0% | |
| ATTGAAATTGAGGAATGGTA+AGG | - | chr4_1:5126383-5126402 | None:intergenic | 30.0% | |
| CATTTCCATGAAAGCAATTT+GGG | - | chr4_1:5126471-5126490 | None:intergenic | 30.0% | |
| TCATTTCCATGAAAGCAATT+TGG | - | chr4_1:5126472-5126491 | None:intergenic | 30.0% | |
| CAAATCTTCCTCTATAGAAA+AGG | + | chr4_1:5126568-5126587 | Msa0531010:intron | 30.0% | |
| ! | CGTTTTTACCTTTTCTATAG+AGG | - | chr4_1:5126579-5126598 | None:intergenic | 30.0% |
| ! | TTGTTGTTAGACTTGAAAGA+AGG | + | chr4_1:5126670-5126689 | Msa0531010:intron | 30.0% |
| TAAAATGAAGGGTCATGATT+TGG | + | chr4_1:5126751-5126770 | Msa0531010:intron | 30.0% | |
| TAAGTCTTTAGACTTACTCT+TGG | + | chr4_1:5126776-5126795 | Msa0531010:intron | 30.0% | |
| ! | ATAGCTTGAATGGACAATTT+TGG | + | chr4_1:5126910-5126929 | Msa0531010:intron | 30.0% |
| TGGACTAATTGCAATGTATA+AGG | - | chr4_1:5126983-5127002 | None:intergenic | 30.0% | |
| ACAAAAAACAATTCAGCAGT+TGG | - | chr4_1:5127167-5127186 | None:intergenic | 30.0% | |
| ! | GTCTAGAATAATAGGATCAA+TGG | - | chr4_1:5127429-5127448 | None:intergenic | 30.0% |
| TTCATCAACACACAAACACT+CGG | - | chr4_1:5118215-5118234 | None:intergenic | 35.0% | |
| TGATTCTCAGAAAGATGCAA+TGG | - | chr4_1:5118401-5118420 | None:intergenic | 35.0% | |
| ! | TTCTGAGAATCATGATACAG+TGG | + | chr4_1:5118409-5118428 | Msa0531010:intron | 35.0% |
| ACGATGCAATTCTCTATAAC+TGG | + | chr4_1:5118453-5118472 | Msa0531010:intron | 35.0% | |
| !! | TGGTTAGGAGTTTTATACTC+TGG | - | chr4_1:5118953-5118972 | None:intergenic | 35.0% |
| ATTGTTATAGTTGGTTGGGA+GGG | - | chr4_1:5118984-5119003 | None:intergenic | 35.0% | |
| TATTGTTATAGTTGGTTGGG+AGG | - | chr4_1:5118985-5119004 | None:intergenic | 35.0% | |
| TTAAATAAGCTTCACGGTGT+TGG | + | chr4_1:5119269-5119288 | Msa0531010:intron | 35.0% | |
| !! | CCCATTTTCTATATTTGGTG+AGG | + | chr4_1:5119330-5119349 | Msa0531010:intron | 35.0% |
| GAGGTAATATTGAATGCAAC+TGG | + | chr4_1:5119349-5119368 | Msa0531010:intron | 35.0% | |
| ! | GGTCTCATTTTATGACAATG+AGG | + | chr4_1:5119473-5119492 | Msa0531010:intron | 35.0% |
| ! | TGAAATCTAGATGAAGTGCT+GGG | + | chr4_1:5119521-5119540 | Msa0531010:intron | 35.0% |
| ATAGCTAGAATGGACAAGTT+TGG | + | chr4_1:5119687-5119706 | Msa0531010:intron | 35.0% | |
| TGGACTAATTGCAATGTACA+AGG | - | chr4_1:5119736-5119755 | None:intergenic | 35.0% | |
| ATGGTTGCTTATAACCAATC+TGG | + | chr4_1:5119991-5120010 | Msa0531010:CDS | 35.0% | |
| ! | TGAAATTGATTCAGTGTTGG+CGG | + | chr4_1:5120050-5120069 | Msa0531010:CDS | 35.0% |
| TGAAGCTGTGGTCATTAATA+TGG | + | chr4_1:5120130-5120149 | Msa0531010:intron | 35.0% | |
| TGAACCAGAAATACAACTAG+AGG | - | chr4_1:5120339-5120358 | None:intergenic | 35.0% | |
| !! | TTTGTTTGCTTTGGGATTGT+TGG | - | chr4_1:5120882-5120901 | None:intergenic | 35.0% |
| !!! | GGGTGTTTTTTTGTTTGCTT+TGG | - | chr4_1:5120891-5120910 | None:intergenic | 35.0% |
| !! | CCAAACAGATTAGTTTGGTT+CGG | - | chr4_1:5121197-5121216 | None:intergenic | 35.0% |
| CCAAACTAATCTGTTTGGTT+CGG | + | chr4_1:5121199-5121218 | Msa0531010:intron | 35.0% | |
| GGATTAACCATAAGTTAGTG+AGG | + | chr4_1:5121752-5121771 | Msa0531010:intron | 35.0% | |
| TAACCATAAGTTAGTGAGGT+AGG | + | chr4_1:5121756-5121775 | Msa0531010:intron | 35.0% | |
| TATCCTACCTCACTAACTTA+TGG | - | chr4_1:5121762-5121781 | None:intergenic | 35.0% | |
| !! | TTATCATCGGATTGGTTCAT+CGG | + | chr4_1:5121806-5121825 | Msa0531010:intron | 35.0% |
| !! | ATCTAGTTTGGTTTGGTTCA+TGG | - | chr4_1:5121856-5121875 | None:intergenic | 35.0% |
| TGAACCAAACCAAACTAGAT+CGG | + | chr4_1:5121856-5121875 | Msa0531010:intron | 35.0% | |
| ! | AAAACCGATCTAGTTTGGTT+TGG | - | chr4_1:5121863-5121882 | None:intergenic | 35.0% |
| CAATCAAAACCGATCTAGTT+TGG | - | chr4_1:5121868-5121887 | None:intergenic | 35.0% | |
| !! | CAAACTAGATCGGTTTTGAT+TGG | + | chr4_1:5121866-5121885 | Msa0531010:intron | 35.0% |
| !!! | TAGATCGGTTTTGATTGGTT+CGG | + | chr4_1:5121871-5121890 | Msa0531010:intron | 35.0% |
| ! | ATATCTGACCTTGTTTGGTT+CGG | - | chr4_1:5121909-5121928 | None:intergenic | 35.0% |
| !!! | GGTCAGATATTTTTTCGGTT+TGG | + | chr4_1:5121919-5121938 | Msa0531010:intron | 35.0% |
| !! | TTTGGTTCGGTTTGTACTTT+CGG | + | chr4_1:5121937-5121956 | Msa0531010:intron | 35.0% |
| CACCGAAAGAGTAAAATACA+AGG | + | chr4_1:5122019-5122038 | Msa0531010:intron | 35.0% | |
| ! | AGAGGAGTGATTTTATGAGA+GGG | + | chr4_1:5122247-5122266 | Msa0531010:intron | 35.0% |
| AACGATGTTTGGAAAAGGTT+GGG | - | chr4_1:5122484-5122503 | None:intergenic | 35.0% | |
| AAACGATGTTTGGAAAAGGT+TGG | - | chr4_1:5122485-5122504 | None:intergenic | 35.0% | |
| TGTAAGTCATGTCTGCAAAT+AGG | + | chr4_1:5122632-5122651 | Msa0531010:intron | 35.0% | |
| GTAAGTCATGTCTGCAAATA+GGG | + | chr4_1:5122633-5122652 | Msa0531010:intron | 35.0% | |
| TAAGTCATGTCTGCAAATAG+GGG | + | chr4_1:5122634-5122653 | Msa0531010:intron | 35.0% | |
| ! | GGAGAGAGTATATAATTGCA+TGG | - | chr4_1:5122705-5122724 | None:intergenic | 35.0% |
| CAAATGGGTGGTTACATATA+TGG | - | chr4_1:5122730-5122749 | None:intergenic | 35.0% | |
| TACCTGAACTGAAACAATGA+GGG | - | chr4_1:5123115-5123134 | None:intergenic | 35.0% | |
| TTACCTGAACTGAAACAATG+AGG | - | chr4_1:5123116-5123135 | None:intergenic | 35.0% | |
| TGTTTCAGTTCAGGTAAAAC+TGG | + | chr4_1:5123119-5123138 | Msa0531010:intron | 35.0% | |
| TGAAATCCGTATGTAAGTCA+TGG | + | chr4_1:5123343-5123362 | Msa0531010:intron | 35.0% | |
| ! | GGTTTTCCATGACTTACATA+CGG | - | chr4_1:5123352-5123371 | None:intergenic | 35.0% |
| AAAATGTACTTACGATGCTG+TGG | - | chr4_1:5123468-5123487 | None:intergenic | 35.0% | |
| AGTAAATGATTAACGGGGAA+GGG | - | chr4_1:5123495-5123514 | None:intergenic | 35.0% | |
| TTGATCAGATATTGTCCTTG+TGG | - | chr4_1:5123682-5123701 | None:intergenic | 35.0% | |
| AACCAACACTTATAAGGTTG+TGG | + | chr4_1:5123770-5123789 | Msa0531010:intron | 35.0% | |
| CAAGCGAAAAAATCACAACT+TGG | - | chr4_1:5123986-5124005 | None:intergenic | 35.0% | |
| CGATTCTCAGAAAGATGTAA+TGG | - | chr4_1:5124263-5124282 | None:intergenic | 35.0% | |
| ACCATGCAATTCTCTATAAC+TGG | + | chr4_1:5124315-5124334 | Msa0531010:intron | 35.0% | |
| TCCAGTTATAGAGAATTGCA+TGG | - | chr4_1:5118457-5118476 | None:intergenic | 35.0% | |
| AGATAACTGAGTTCGAAACA+TGG | - | chr4_1:5124510-5124529 | None:intergenic | 35.0% | |
| ! | ATTGATGGTACATGTTAGGT+TGG | + | chr4_1:5124884-5124903 | Msa0531010:intron | 35.0% |
| ! | GCCTTCTTCATGTCTATTTT+GGG | + | chr4_1:5124978-5124997 | Msa0531010:intron | 35.0% |
| TCCCAAAATAGACATGAAGA+AGG | - | chr4_1:5124982-5125001 | None:intergenic | 35.0% | |
| !!! | CATGTCTATTTTGGGATTCT+TGG | + | chr4_1:5124986-5125005 | Msa0531010:intron | 35.0% |
| !! | TCACTTGCTTTTACACAAAC+AGG | - | chr4_1:5125072-5125091 | None:intergenic | 35.0% |
| !! | CATTCAGAGCATTGCAAAAA+TGG | - | chr4_1:5125140-5125159 | None:intergenic | 35.0% |
| CTAACTCGTAACATATACCA+GGG | - | chr4_1:5125184-5125203 | None:intergenic | 35.0% | |
| CAGCTAAAATCAGTAGCAAA+AGG | - | chr4_1:5125257-5125276 | None:intergenic | 35.0% | |
| !! | GAAACCTGCTCTATTTTTCT+TGG | + | chr4_1:5125429-5125448 | Msa0531010:intron | 35.0% |
| GGATACTATACTACTCGAAT+TGG | + | chr4_1:5125863-5125882 | Msa0531010:intron | 35.0% | |
| TTCATGTTGTGAAAACATCC+TGG | + | chr4_1:5125933-5125952 | Msa0531010:intron | 35.0% | |
| TTGTGAAAACATCCTGGTTA+AGG | + | chr4_1:5125939-5125958 | Msa0531010:intron | 35.0% | |
| !! | GGTCTCATTTTATTAGGTTG+AGG | + | chr4_1:5125960-5125979 | Msa0531010:intron | 35.0% |
| CTGAAATCTAGATGAAGTGA+TGG | + | chr4_1:5126007-5126026 | Msa0531010:intron | 35.0% | |
| AGACTTACTCTTAGAGTCAA+TGG | - | chr4_1:5126184-5126203 | None:intergenic | 35.0% | |
| GTGAATCCAGAATTGTCAAT+GGG | - | chr4_1:5126436-5126455 | None:intergenic | 35.0% | |
| TGTGAATCCAGAATTGTCAA+TGG | - | chr4_1:5126437-5126456 | None:intergenic | 35.0% | |
| TGATTCCCAAATTGCTTTCA+TGG | + | chr4_1:5126463-5126482 | Msa0531010:intron | 35.0% | |
| TGAATTGCCATCGATAGAAA+AGG | + | chr4_1:5126612-5126631 | Msa0531010:intron | 35.0% | |
| ! | CTTTCTTCTGCAGTTTGTTT+GGG | + | chr4_1:5127035-5127054 | Msa0531010:intron | 35.0% |
| ATGGTTGCTTATAACCAATC+TGG | + | chr4_1:5119991-5120010 | Msa0531010:CDS | 35.0% | |
| CATTGAAATTGATCCAGTGT+CGG | + | chr4_1:5127283-5127302 | Msa0531010:CDS | 35.0% | |
| AAGCAATAGCAATACTCTAC+AGG | - | chr4_1:5127355-5127374 | None:intergenic | 35.0% | |
| ATTAACCACAGTTTCAGCAT+TGG | - | chr4_1:5127378-5127397 | None:intergenic | 35.0% | |
| CATTAATACGGAATTGAGTG+TGG | + | chr4_1:5127400-5127419 | Msa0531010:three_prime_UTR | 35.0% | |
| !! | GTTGGTGATGTAGTAGTTTA+TGG | + | chr4_1:5127470-5127489 | Msa0531010:three_prime_UTR | 35.0% |
| GTCATTGTTTCGCTTGACTT+AGG | + | chr4_1:5118128-5118147 | Msa0531010:intron | 40.0% | |
| !! | AGGCGACCGATTTTGTTATA+TGG | + | chr4_1:5118261-5118280 | Msa0531010:intron | 40.0% |
| AATTCAAAATGCAAGCGACC+AGG | - | chr4_1:5118374-5118393 | None:intergenic | 40.0% | |
| GAATCATGATACAGTGGTGT+TGG | + | chr4_1:5118415-5118434 | Msa0531010:intron | 40.0% | |
| AGAGAATTGCATCGTCTTGT+AGG | - | chr4_1:5118448-5118467 | None:intergenic | 40.0% | |
| GAACGATTATGTCGAAAGCT+TGG | + | chr4_1:5118532-5118551 | Msa0531010:intron | 40.0% | |
| CATCATGGGTGTACTTGAAT+TGG | - | chr4_1:5118743-5118762 | None:intergenic | 40.0% | |
| !! | TAGGAGTTTTATACTCTGGC+AGG | - | chr4_1:5118949-5118968 | None:intergenic | 40.0% |
| ACACTGATAAGACACCTAGA+GGG | - | chr4_1:5119057-5119076 | None:intergenic | 40.0% | |
| CCTTATTCTCACAACTCACA+AGG | - | chr4_1:5119105-5119124 | None:intergenic | 40.0% | |
| CCTTGTGAGTTGTGAGAATA+AGG | + | chr4_1:5119102-5119121 | Msa0531010:intron | 40.0% | |
| CCTTAACCAAGATCTTCTCA+CGG | - | chr4_1:5119455-5119474 | None:intergenic | 40.0% | |
| CTGAAATCTAGATGAAGTGC+TGG | + | chr4_1:5119520-5119539 | Msa0531010:intron | 40.0% | |
| TGCTTATAACCAATCTGGTG+TGG | + | chr4_1:5119996-5120015 | Msa0531010:CDS | 40.0% | |
| AAAATTGCACCACACCAGAT+TGG | - | chr4_1:5120008-5120027 | None:intergenic | 40.0% | |
| ! | CAGCATCGAAAATACTGTTC+AGG | - | chr4_1:5120112-5120131 | None:intergenic | 40.0% |
| ! | TATTTTCGATGCTGAAGCTG+TGG | + | chr4_1:5120118-5120137 | Msa0531010:intron | 40.0% |
| TTGGCCTCTAGTTGTATTTC+TGG | + | chr4_1:5120332-5120351 | Msa0531010:intron | 40.0% | |
| ATTCTTTAGACACGCTGCAA+TGG | - | chr4_1:5121008-5121027 | None:intergenic | 40.0% | |
| TCACAAGATCAAGCACACTT+AGG | + | chr4_1:5121063-5121082 | Msa0531010:intron | 40.0% | |
| CACAAGATCAAGCACACTTA+GGG | + | chr4_1:5121064-5121083 | Msa0531010:intron | 40.0% | |
| ACAAGATCAAGCACACTTAG+GGG | + | chr4_1:5121065-5121084 | Msa0531010:intron | 40.0% | |
| ! | CGATGAAGATTTCATCGGTT+CGG | - | chr4_1:5121133-5121152 | None:intergenic | 40.0% |
| CGAACCGATGAAATCTTCAT+CGG | + | chr4_1:5121131-5121150 | Msa0531010:intron | 40.0% | |
| CGAACCGATGAAGATTTCAT+CGG | - | chr4_1:5121138-5121157 | None:intergenic | 40.0% | |
| ! | CGATGAAATCTTCATCGGTT+CGG | + | chr4_1:5121136-5121155 | Msa0531010:intron | 40.0% |
| !! | AAATCTTCATCGGTTCGGAT+TGG | + | chr4_1:5121141-5121160 | Msa0531010:intron | 40.0% |
| CCGAACCAAACTAATCTGTT+TGG | + | chr4_1:5121194-5121213 | Msa0531010:intron | 40.0% | |
| ! | CCGAACCAAACAGATTAGTT+TGG | - | chr4_1:5121202-5121221 | None:intergenic | 40.0% |
| !! | CTAATCTGTTTGGTTCGGTT+TGG | + | chr4_1:5121204-5121223 | Msa0531010:intron | 40.0% |
| !! | TTTGGATTGGTTCGGTTGAT+CGG | + | chr4_1:5121222-5121241 | Msa0531010:intron | 40.0% |
| AACCAATTGTTCATCACCAC+CGG | - | chr4_1:5121604-5121623 | None:intergenic | 40.0% | |
| ! | GTGGTGATGAACAATTGGTT+TGG | + | chr4_1:5121604-5121623 | Msa0531010:intron | 40.0% |
| !! | GATGAACAATTGGTTTGGTG+TGG | + | chr4_1:5121609-5121628 | Msa0531010:intron | 40.0% |
| !! | AATTGGTTTGGTGTGGTTGA+TGG | + | chr4_1:5121616-5121635 | Msa0531010:intron | 40.0% |
| ATAAGGAGTGGGGTTATCAT+CGG | + | chr4_1:5121793-5121812 | Msa0531010:intron | 40.0% | |
| GTTTCAAACCGAACCAAACA+AGG | + | chr4_1:5121898-5121917 | Msa0531010:intron | 40.0% | |
| GTTTGTACTTTCGGTTTCGT+TGG | + | chr4_1:5121946-5121965 | Msa0531010:intron | 40.0% | |
| ! | ATCCAATGGAAGTGTGCTTA+GGG | - | chr4_1:5121993-5122012 | None:intergenic | 40.0% |
| ! | AATCCAATGGAAGTGTGCTT+AGG | - | chr4_1:5121994-5122013 | None:intergenic | 40.0% |
| ! | GCACACTTCCATTGGATTTT+CGG | + | chr4_1:5121996-5122015 | Msa0531010:intron | 40.0% |
| CTCATAAAATCACTCCTCTC+AGG | - | chr4_1:5122246-5122265 | None:intergenic | 40.0% | |
| ! | GAGAGGAGTGATTTTATGAG+AGG | + | chr4_1:5122246-5122265 | Msa0531010:intron | 40.0% |
| CTTAAGAGACGAAGAAGTGA+AGG | - | chr4_1:5122404-5122423 | None:intergenic | 40.0% | |
| TCTGCAAATAGGGGTTACAT+AGG | + | chr4_1:5122643-5122662 | Msa0531010:intron | 40.0% | |
| TGGGTGGTTACATATATGGA+CGG | - | chr4_1:5122726-5122745 | None:intergenic | 40.0% | |
| TGCTCGTAATCTTGCTGATA+TGG | + | chr4_1:5123022-5123041 | Msa0531010:intron | 40.0% | |
| GTGATTAGATGATGTGTCCA+TGG | + | chr4_1:5123047-5123066 | Msa0531010:intron | 40.0% | |
| TCCATGGTGAATACGACTAA+AGG | + | chr4_1:5123063-5123082 | Msa0531010:intron | 40.0% | |
| ACCTTTAGTCGTATTCACCA+TGG | - | chr4_1:5123067-5123086 | None:intergenic | 40.0% | |
| AACCCTCATTGTTTCAGTTC+AGG | + | chr4_1:5123110-5123129 | Msa0531010:intron | 40.0% | |
| GAGTAAATGATTAACGGGGA+AGG | - | chr4_1:5123496-5123515 | None:intergenic | 40.0% | |
| ! | CTCTAGGAAGGGTGATATTA+TGG | - | chr4_1:5123524-5123543 | None:intergenic | 40.0% |
| ! | GTAGTAAGGATCTCTAGGAA+GGG | - | chr4_1:5123535-5123554 | None:intergenic | 40.0% |
| AAACGGTAGTAAGGATCTCT+AGG | - | chr4_1:5123540-5123559 | None:intergenic | 40.0% | |
| ! | TAGCCGCAACAGGTAAATTT+TGG | - | chr4_1:5123866-5123885 | None:intergenic | 40.0% |
| AAAATTTACCTGTTGCGGCT+AGG | + | chr4_1:5123865-5123884 | Msa0531010:intron | 40.0% | |
| !! | AGGGGACCGATTTTGTTATA+TGG | + | chr4_1:5124123-5124142 | Msa0531010:intron | 40.0% |
| ! | TTCTGAGAATCGTGATACAG+TGG | + | chr4_1:5124271-5124290 | Msa0531010:intron | 40.0% |
| GAATTATCCAGAAGATGCGT+TGG | + | chr4_1:5124363-5124382 | Msa0531010:intron | 40.0% | |
| GAAGGATTATGTCGAAAGCT+TGG | + | chr4_1:5124394-5124413 | Msa0531010:intron | 40.0% | |
| AAACATGGTAACAGGATCGA+TGG | - | chr4_1:5124495-5124514 | None:intergenic | 40.0% | |
| TGAGTTCGAAACATGGTAAC+AGG | - | chr4_1:5124503-5124522 | None:intergenic | 40.0% | |
| CATCATGGATGTACTTGAAC+TGG | - | chr4_1:5124605-5124624 | None:intergenic | 40.0% | |
| TCATACTGTTGTGTCATCTG+TGG | + | chr4_1:5124650-5124669 | Msa0531010:intron | 40.0% | |
| ACGAATCCTGTTAGACAAGA+GGG | - | chr4_1:5124817-5124836 | None:intergenic | 40.0% | |
| AACGAATCCTGTTAGACAAG+AGG | - | chr4_1:5124818-5124837 | None:intergenic | 40.0% | |
| !! | ATGGTACATGTTAGGTTGGT+AGG | + | chr4_1:5124888-5124907 | Msa0531010:intron | 40.0% |
| ! | GGCCTTCTTCATGTCTATTT+TGG | + | chr4_1:5124977-5124996 | Msa0531010:intron | 40.0% |
| ! | GACACTAATATTTGGTTCCC+TGG | + | chr4_1:5125164-5125183 | Msa0531010:intron | 40.0% |
| GCTAACTCGTAACATATACC+AGG | - | chr4_1:5125185-5125204 | None:intergenic | 40.0% | |
| GGATATCGGTGTAAACAGAA+AGG | - | chr4_1:5125573-5125592 | None:intergenic | 40.0% | |
| CCAATATCTAGACAAGCTTC+AGG | - | chr4_1:5125676-5125695 | None:intergenic | 40.0% | |
| CCTGAAGCTTGTCTAGATAT+TGG | + | chr4_1:5125673-5125692 | Msa0531010:intron | 40.0% | |
| AATATCCCACTTCCCATACT+TGG | + | chr4_1:5125813-5125832 | Msa0531010:intron | 40.0% | |
| TTGTGTCCCATTGACAATTC+TGG | + | chr4_1:5126427-5126446 | Msa0531010:intron | 40.0% | |
| ! | CATTGCTCCTTTTCTATCGA+TGG | - | chr4_1:5126622-5126641 | None:intergenic | 40.0% |
| ! | TTGTTATGGTGAGGGTTTTG+TGG | - | chr4_1:5126272-5126291 | None:intergenic | 40.0% |
| AGACTTACTCTTGGAGTCAA+TGG | + | chr4_1:5126785-5126804 | Msa0531010:intron | 40.0% | |
| CCAAACAAACTGCAGAAGAA+AGG | - | chr4_1:5127037-5127056 | None:intergenic | 40.0% | |
| ! | CCTTTCTTCTGCAGTTTGTT+TGG | + | chr4_1:5127034-5127053 | Msa0531010:intron | 40.0% |
| TTACAGGTGGTATAACTGCA+TGG | + | chr4_1:5127201-5127220 | Msa0531010:intron | 40.0% | |
| TACAGGTGGTATAACTGCAT+GGG | + | chr4_1:5127202-5127221 | Msa0531010:intron | 40.0% | |
| TGCTTATAACCAATCTGGTG+TGG | + | chr4_1:5119996-5120015 | Msa0531010:CDS | 40.0% | |
| AAAATTGCACCACACCAGAT+TGG | - | chr4_1:5120008-5120027 | None:intergenic | 40.0% | |
| CGACACTGGATCAATTTCAA+TGG | - | chr4_1:5127285-5127304 | None:intergenic | 40.0% | |
| TAATACGGAATTGAGTGTGG+CGG | + | chr4_1:5127403-5127422 | Msa0531010:three_prime_UTR | 40.0% | |
| CAGACTAAGACAAAACAGCT+AGG | - | chr4_1:5127529-5127548 | None:intergenic | 40.0% | |
| TTGTCTTAGTCTGTCACTGT+TGG | + | chr4_1:5127536-5127555 | Msa0531010:three_prime_UTR | 40.0% | |
| !! | GTCACTGTTGGTTCAAAATC+TGG | + | chr4_1:5127548-5127567 | Msa0531010:three_prime_UTR | 40.0% |
| ! | AAATCTGGTTTGAGTGTTCC+TGG | + | chr4_1:5127563-5127582 | Msa0531010:three_prime_UTR | 40.0% |
| CTGGAGAACTAACAGAGCAA+AGG | + | chr4_1:5118472-5118491 | Msa0531010:intron | 45.0% | |
| ! | AGGACACTTTTATTGACCGC+AGG | + | chr4_1:5118492-5118511 | Msa0531010:intron | 45.0% |
| TTATTGACCGCAGGATACGT+TGG | + | chr4_1:5118501-5118520 | Msa0531010:intron | 45.0% | |
| !! | GGCAGGAGTGTTCAAACATT+TGG | - | chr4_1:5118932-5118951 | None:intergenic | 45.0% |
| CACACTGATAAGACACCTAG+AGG | - | chr4_1:5119058-5119077 | None:intergenic | 45.0% | |
| TTCATGCCGTGAGAAGATCT+TGG | + | chr4_1:5119446-5119465 | Msa0531010:intron | 45.0% | |
| CCGTGAGAAGATCTTGGTTA+AGG | + | chr4_1:5119452-5119471 | Msa0531010:intron | 45.0% | |
| ! | GTTGATGCTGGTTGCTTTAC+AGG | + | chr4_1:5119949-5119968 | Msa0531010:CDS | 45.0% |
| TTACAGGTGGTATAGCTGCA+TGG | + | chr4_1:5119965-5119984 | Msa0531010:CDS | 45.0% | |
| TACAGGTGGTATAGCTGCAT+GGG | + | chr4_1:5119966-5119985 | Msa0531010:CDS | 45.0% | |
| ACTGTTGCTCACAACTTAGC+TGG | + | chr4_1:5120254-5120273 | Msa0531010:intron | 45.0% | |
| !! | GCTGGTTTGTCTTAGTCTCT+TGG | + | chr4_1:5120272-5120291 | Msa0531010:intron | 45.0% |
| TACAACTAGAGGCCAAGCAA+AGG | - | chr4_1:5120328-5120347 | None:intergenic | 45.0% | |
| GCGTCGGATAATTAAGCCAA+TGG | - | chr4_1:5120635-5120654 | None:intergenic | 45.0% | |
| TAATTATCCGACGCCTCACA+TGG | + | chr4_1:5120641-5120660 | Msa0531010:intron | 45.0% | |
| GAGATATGGTTCAGCCATGT+GGG | - | chr4_1:5120688-5120707 | None:intergenic | 45.0% | |
| TGAGATATGGTTCAGCCATG+TGG | - | chr4_1:5120689-5120708 | None:intergenic | 45.0% | |
| GATGCGTTGAGAGTTTGGAA+GGG | - | chr4_1:5120828-5120847 | None:intergenic | 45.0% | |
| ! | AAGCACACTTAGGGGTGTAA+CGG | + | chr4_1:5121073-5121092 | Msa0531010:intron | 45.0% |
| !! | TGTAACGGTTCGGTTTGGAT+TGG | + | chr4_1:5121088-5121107 | Msa0531010:intron | 45.0% |
| !! | TTCATCGGTTCGGATTGGTT+CGG | + | chr4_1:5121146-5121165 | Msa0531010:intron | 45.0% |
| !! | CTGTTTGGTTCGGTTTGGAT+TGG | + | chr4_1:5121209-5121228 | Msa0531010:intron | 45.0% |
| !! | TGGTTCGGTTTGGATTGGTT+CGG | + | chr4_1:5121214-5121233 | Msa0531010:intron | 45.0% |
| CAAGAGATAAACGATCGCAG+CGG | + | chr4_1:5121575-5121594 | Msa0531010:intron | 45.0% | |
| !! | TTTGGTGTGGTTGATGGCTA+GGG | + | chr4_1:5121622-5121641 | Msa0531010:intron | 45.0% |
| !! | GGATTGGTTCATCGGTTTCA+CGG | + | chr4_1:5121814-5121833 | Msa0531010:intron | 45.0% |
| !!! | CGGTTTTGATTGGTTCGGAT+CGG | + | chr4_1:5121876-5121895 | Msa0531010:intron | 45.0% |
| ! | TCCAATGGAAGTGTGCTTAG+GGG | - | chr4_1:5121992-5122011 | None:intergenic | 45.0% |
| !! | TTTCGGTGCCGAAAATCCAA+TGG | - | chr4_1:5122007-5122026 | None:intergenic | 45.0% |
| TTCTCACCGAAATCCTATCC+CGG | + | chr4_1:5123295-5123314 | Msa0531010:intron | 45.0% | |
| TTAGAGATTTGACTGGGAGC+CGG | - | chr4_1:5123317-5123336 | None:intergenic | 45.0% | |
| ! | GGTAGTAAGGATCTCTAGGA+AGG | - | chr4_1:5123536-5123555 | None:intergenic | 45.0% |
| TCGTCGTTCAAACGGTAGTA+AGG | - | chr4_1:5123549-5123568 | None:intergenic | 45.0% | |
| AAAGATTGTCGCGAGGTTGT+TGG | + | chr4_1:5123570-5123589 | Msa0531010:intron | 45.0% | |
| !! | TGTTGGTTCGTGCAATGGAT+TGG | + | chr4_1:5123587-5123606 | Msa0531010:intron | 45.0% |
| TTGTGGCAGGATTCCAGAAA+CGG | - | chr4_1:5123665-5123684 | None:intergenic | 45.0% | |
| TCAGATATTGTCCTTGTGGC+AGG | - | chr4_1:5123678-5123697 | None:intergenic | 45.0% | |
| GGCCACAACCTTATAAGTGT+TGG | - | chr4_1:5123775-5123794 | None:intergenic | 45.0% | |
| GAATCGTGATACAGTGGTGT+TGG | + | chr4_1:5124277-5124296 | Msa0531010:intron | 45.0% | |
| TAGAGAACCAACGCATCTTC+TGG | - | chr4_1:5124373-5124392 | None:intergenic | 45.0% | |
| !! | GATGCGTTGGTTCTCTATGA+AGG | + | chr4_1:5124376-5124395 | Msa0531010:intron | 45.0% |
| ACTCACCAAGTATGGGAAGT+GGG | - | chr4_1:5125821-5125840 | None:intergenic | 45.0% | |
| AACTCACCAAGTATGGGAAG+TGG | - | chr4_1:5125822-5125841 | None:intergenic | 45.0% | |
| AGGAATGGTAAGGTTGTCGA+AGG | - | chr4_1:5126373-5126392 | None:intergenic | 45.0% | |
| ! | GTTGATGCTGCTTGCTTTAC+AGG | + | chr4_1:5127185-5127204 | Msa0531010:intron | 45.0% |
| ACAGGTGGTATAACTGCATG+GGG | + | chr4_1:5127203-5127222 | Msa0531010:intron | 45.0% | |
| TGGTATAACTGCATGGGGAA+TGG | + | chr4_1:5127208-5127227 | Msa0531010:CDS | 45.0% | |
| ! | GTGTGGTGCAATTTTCAGCT+TGG | + | chr4_1:5120013-5120032 | Msa0531010:CDS | 45.0% |
| ! | TGAAATTGATCCAGTGTCGG+CGG | + | chr4_1:5127286-5127305 | Msa0531010:CDS | 45.0% |
| TGCTTCCAATGCTGAAACTG+TGG | + | chr4_1:5127370-5127389 | Msa0531010:three_prime_UTR | 45.0% | |
| ACAGTATCAAACCAACAGCC+AGG | - | chr4_1:5127584-5127603 | None:intergenic | 45.0% | |
| TTCTCATAACCTGGAGGAGG+AGG | - | chr4_1:5118176-5118195 | None:intergenic | 50.0% | |
| TCCTCCTCCAGGTTATGAGA+AGG | + | chr4_1:5118175-5118194 | Msa0531010:intron | 50.0% | |
| ACCTTCTCATAACCTGGAGG+AGG | - | chr4_1:5118179-5118198 | None:intergenic | 50.0% | |
| TCCTCCAGGTTATGAGAAGG+TGG | + | chr4_1:5118178-5118197 | Msa0531010:intron | 50.0% | |
| TAGAGAGCCAACGTATCCTG+CGG | - | chr4_1:5118511-5118530 | None:intergenic | 50.0% | |
| GTTGGTCAGAGAGCTGTTCT+AGG | - | chr4_1:5119888-5119907 | None:intergenic | 50.0% | |
| ! | GATGCTGGTTGCTTTACAGG+TGG | + | chr4_1:5119952-5119971 | Msa0531010:CDS | 50.0% |
| ACAGGTGGTATAGCTGCATG+GGG | + | chr4_1:5119967-5119986 | Msa0531010:CDS | 50.0% | |
| TGGTATAGCTGCATGGGGAA+TGG | + | chr4_1:5119972-5119991 | Msa0531010:CDS | 50.0% | |
| ! | GAGTGTTCCTAGCCTTTGCT+TGG | + | chr4_1:5120313-5120332 | Msa0531010:intron | 50.0% |
| GTCATAACCATGTGAGGCGT+CGG | - | chr4_1:5120651-5120670 | None:intergenic | 50.0% | |
| AGGCGAGTCATAACCATGTG+AGG | - | chr4_1:5120657-5120676 | None:intergenic | 50.0% | |
| TCGCCTATTACTCTCCCACA+TGG | + | chr4_1:5120671-5120690 | Msa0531010:intron | 50.0% | |
| CAGCCATGTGGGAGAGTAAT+AGG | - | chr4_1:5120677-5120696 | None:intergenic | 50.0% | |
| CGATGCGTTGAGAGTTTGGA+AGG | - | chr4_1:5120829-5120848 | None:intergenic | 50.0% | |
| GAGACGATGCGTTGAGAGTT+TGG | - | chr4_1:5120833-5120852 | None:intergenic | 50.0% | |
| ! | CACTTAGGGGTGTAACGGTT+CGG | + | chr4_1:5121078-5121097 | Msa0531010:intron | 50.0% |
| CGCTGCGATCGTTTATCTCT+TGG | - | chr4_1:5121577-5121596 | None:intergenic | 50.0% | |
| !! | GTTTGGTGTGGTTGATGGCT+AGG | + | chr4_1:5121621-5121640 | Msa0531010:intron | 50.0% |
| GAGTGGGGTTATCATCGGAT+TGG | + | chr4_1:5121798-5121817 | Msa0531010:intron | 50.0% | |
| ! | AGTGTGCTTAGGGGTGTAAG+CGG | - | chr4_1:5121983-5122002 | None:intergenic | 50.0% |
| ACCCCTAAGCACACTTCCAT+TGG | + | chr4_1:5121988-5122007 | Msa0531010:intron | 50.0% | |
| !! | AGGAGCGCTGAGAGAGTAAA+TGG | + | chr4_1:5122039-5122058 | Msa0531010:intron | 50.0% |
| GAGTAAATGGACACATGCGC+AGG | + | chr4_1:5122052-5122071 | Msa0531010:intron | 50.0% | |
| ! | TGGTGTTAACGGATCCTGAG+AGG | + | chr4_1:5122229-5122248 | Msa0531010:intron | 50.0% |
| TCAGCAAGATTACGAGCACG+TGG | - | chr4_1:5123020-5123039 | None:intergenic | 50.0% | |
| GAACCGCTCCGATGAATTCA+CGG | + | chr4_1:5123217-5123236 | Msa0531010:intron | 50.0% | |
| ATTTCGGTGAGAACCTCGTC+CGG | - | chr4_1:5123288-5123307 | None:intergenic | 50.0% | |
| TAGAGATTTGACTGGGAGCC+GGG | - | chr4_1:5123316-5123335 | None:intergenic | 50.0% | |
| CGACGATAAAGATTGTCGCG+AGG | + | chr4_1:5123563-5123582 | Msa0531010:intron | 50.0% | |
| !! | GAGGTTGTTGGTTCGTGCAA+TGG | + | chr4_1:5123582-5123601 | Msa0531010:intron | 50.0% |
| CAGTTATGTGGCTCCGTTTC+TGG | + | chr4_1:5123649-5123668 | Msa0531010:intron | 50.0% | |
| !! | GTTTCTGGAATCCTGCCACA+AGG | + | chr4_1:5123664-5123683 | Msa0531010:intron | 50.0% |
| ATTTACCTGTTGCGGCTAGG+AGG | + | chr4_1:5123868-5123887 | Msa0531010:intron | 50.0% | |
| GGCTAGGAGGTTGTCTTTGA+TGG | + | chr4_1:5123881-5123900 | Msa0531010:intron | 50.0% | |
| CACACAATTGCTTCCTCCTC+CGG | + | chr4_1:5124025-5124044 | Msa0531010:intron | 50.0% | |
| ACACAATTGCTTCCTCCTCC+GGG | + | chr4_1:5124026-5124045 | Msa0531010:intron | 50.0% | |
| ACATTCTCATAACCCGGAGG+AGG | - | chr4_1:5124041-5124060 | None:intergenic | 50.0% | |
| TCCTCCGGGTTATGAGAATG+TGG | + | chr4_1:5124040-5124059 | Msa0531010:intron | 50.0% | |
| CGTGCCACATTCTCATAACC+CGG | - | chr4_1:5124047-5124066 | None:intergenic | 50.0% | |
| GCTTCACCCTCTTGTCTAAC+AGG | + | chr4_1:5124808-5124827 | Msa0531010:intron | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr4_1:5126126-5126145 | Msa0531010:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+GGG | + | chr4_1:5126127-5126146 | Msa0531010:intron | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+GGG | + | chr4_1:5126126-5126145 | Msa0531010:intron | 50.0% | |
| TGGTCAGAGAGAGCTGTTCT+AGG | - | chr4_1:5127125-5127144 | None:intergenic | 50.0% | |
| ! | GATGCTGCTTGCTTTACAGG+TGG | + | chr4_1:5127188-5127207 | Msa0531010:intron | 50.0% |
| GTTTGAGTGTTCCTGGCTGT+TGG | + | chr4_1:5127570-5127589 | Msa0531010:three_prime_UTR | 50.0% | |
| ACACAATTGCCTCCTCCTCC+AGG | + | chr4_1:5118164-5118183 | Msa0531010:intron | 55.0% | |
| GCCACCTTCTCATAACCTGG+AGG | - | chr4_1:5118182-5118201 | None:intergenic | 55.0% | |
| CGTGCCACCTTCTCATAACC+TGG | - | chr4_1:5118185-5118204 | None:intergenic | 55.0% | |
| GGGAGGGTTTCTCTCTGGTT+AGG | - | chr4_1:5118968-5118987 | None:intergenic | 55.0% | |
| TGGTTGGGAGGGTTTCTCTC+TGG | - | chr4_1:5118973-5118992 | None:intergenic | 55.0% | |
| !! | TCAGTGTTGGCGGAAGCACT+TGG | + | chr4_1:5120060-5120079 | Msa0531010:CDS | 55.0% |
| !! | CAGTGTTGGCGGAAGCACTT+GGG | + | chr4_1:5120061-5120080 | Msa0531010:CDS | 55.0% |
| !! | AGTGTTGGCGGAAGCACTTG+GGG | + | chr4_1:5120062-5120081 | Msa0531010:CDS | 55.0% |
| !! | CGGAAGCACTTGGGGTTAGT+AGG | + | chr4_1:5120070-5120089 | Msa0531010:intron | 55.0% |
| CTAGAGGCCAAGCAAAGGCT+AGG | - | chr4_1:5120323-5120342 | None:intergenic | 55.0% | |
| !! | AGGGGTGTAACGGTTCGGTT+TGG | + | chr4_1:5121083-5121102 | Msa0531010:intron | 55.0% |
| GAGATAAACGATCGCAGCGG+TGG | + | chr4_1:5121578-5121597 | Msa0531010:intron | 55.0% | |
| ! | GGCCGGTGGTGATGAACAAT+TGG | + | chr4_1:5121599-5121618 | Msa0531010:intron | 55.0% |
| ! | GCTTAGGGGTGTAAGCGGTT+CGG | - | chr4_1:5121978-5121997 | None:intergenic | 55.0% |
| GGCTTTGCGACTGTGCTGTA+AGG | - | chr4_1:5123180-5123199 | None:intergenic | 55.0% | |
| ACGCCGTGAATTCATCGGAG+CGG | - | chr4_1:5123223-5123242 | None:intergenic | 55.0% | |
| CGGAGACGCCGTGAATTCAT+CGG | - | chr4_1:5123228-5123247 | None:intergenic | 55.0% | |
| ! | TCTGACGGCGGTGATGGTTT+GGG | - | chr4_1:5123258-5123277 | None:intergenic | 55.0% |
| ! | TTCTGACGGCGGTGATGGTT+TGG | - | chr4_1:5123259-5123278 | None:intergenic | 55.0% |
| TTTCGGTGAGAACCTCGTCC+GGG | - | chr4_1:5123287-5123306 | None:intergenic | 55.0% | |
| TGGGAGCCGGGATAGGATTT+CGG | - | chr4_1:5123304-5123323 | None:intergenic | 55.0% | |
| ATTTGACTGGGAGCCGGGAT+AGG | - | chr4_1:5123311-5123330 | None:intergenic | 55.0% | |
| GCCACATTCTCATAACCCGG+AGG | - | chr4_1:5124044-5124063 | None:intergenic | 55.0% | |
| !! | CGGAAGCACTTGGGGTTAGA+TGG | + | chr4_1:5127306-5127325 | Msa0531010:CDS | 55.0% |
| TAAACGATCGCAGCGGTGGC+CGG | + | chr4_1:5121582-5121601 | Msa0531010:intron | 60.0% | |
| AGGGTTTCTGACGGCGGTGA+TGG | - | chr4_1:5123264-5123283 | None:intergenic | 60.0% | |
| TCGTCCGGGAGGGTTTCTGA+CGG | - | chr4_1:5123273-5123292 | None:intergenic | 60.0% | |
| GACAACCTCCTAGCCGCAAC+AGG | - | chr4_1:5123876-5123895 | None:intergenic | 60.0% | |
| !! | CAGTGTCGGCGGAAGCACTT+GGG | + | chr4_1:5127297-5127316 | Msa0531010:CDS | 60.0% |
| !! | AGTGTCGGCGGAAGCACTTG+GGG | + | chr4_1:5127298-5127317 | Msa0531010:CDS | 60.0% |
| ACCGCCGTCAGAAACCCTCC+CGG | + | chr4_1:5123266-5123285 | Msa0531010:intron | 65.0% | |
| TCCGGGAGGGTTTCTGACGG+CGG | - | chr4_1:5123270-5123289 | None:intergenic | 65.0% | |
| GTCAGAAACCCTCCCGGACG+AGG | + | chr4_1:5123272-5123291 | Msa0531010:intron | 65.0% | |
| GGTGAGAACCTCGTCCGGGA+GGG | - | chr4_1:5123283-5123302 | None:intergenic | 65.0% | |
| CCAAGTGCTTCCGCCGACAC+TGG | - | chr4_1:5127299-5127318 | None:intergenic | 65.0% | |
| !! | CCAGTGTCGGCGGAAGCACT+TGG | + | chr4_1:5127296-5127315 | Msa0531010:CDS | 65.0% |
| CGGTGAGAACCTCGTCCGGG+AGG | - | chr4_1:5123284-5123303 | None:intergenic | 70.0% | |
| ACGATCGCAGCGGTGGCCGG+TGG | + | chr4_1:5121585-5121604 | Msa0531010:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 5118053 | 5127637 | 5118053 | ID=Msa0531010;Name=Msa0531010 |
| chr4_1 | mRNA | 5118053 | 5127637 | 5118053 | ID=Msa0531010-mRNA-1;Parent=Msa0531010;Name=Msa0531010-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0|0.33|0.66|0|0|3|279|120 |
| chr4_1 | exon | 5118053 | 5118059 | 5118053 | ID=Msa0531010-mRNA-1:exon:1553;Parent=Msa0531010-mRNA-1 |
| chr4_1 | exon | 5119884 | 5120087 | 5119884 | ID=Msa0531010-mRNA-1:exon:1554;Parent=Msa0531010-mRNA-1 |
| chr4_1 | exon | 5127207 | 5127637 | 5127207 | ID=Msa0531010-mRNA-1:exon:1555;Parent=Msa0531010-mRNA-1 |
| chr4_1 | CDS | 5118053 | 5118059 | 5118053 | ID=Msa0531010-mRNA-1:cds;Parent=Msa0531010-mRNA-1 |
| chr4_1 | CDS | 5119884 | 5120087 | 5119884 | ID=Msa0531010-mRNA-1:cds;Parent=Msa0531010-mRNA-1 |
| chr4_1 | CDS | 5127207 | 5127358 | 5127207 | ID=Msa0531010-mRNA-1:cds;Parent=Msa0531010-mRNA-1 |
| chr4_1 | three_prime_UTR | 5127359 | 5127637 | 5127359 | ID=Msa0531010-mRNA-1:three_prime_utr;Parent=Msa0531010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
