Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0531810 | XP_024638685.2 | 97.039 | 304 | 8 | 1 | 1 | 304 | 1 | 303 | 0.0 | 585 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0531810 | A0A396I1V9 | 97.039 | 304 | 8 | 1 | 1 | 304 | 1 | 303 | 0.0 | 585 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0531810 | Msa0942550 | 0.820548 | 6.473263e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0531810 | MtrunA17_Chr4g0005301 | 97.039 | 304 | 8 | 1 | 1 | 304 | 1 | 303 | 0.0 | 585 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0531810 | AT3G08780.1 | 45.016 | 311 | 143 | 7 | 7 | 306 | 6 | 299 | 7.92e-81 | 248 |
| Msa0531810 | AT3G08780.2 | 45.307 | 309 | 141 | 7 | 7 | 304 | 6 | 297 | 1.68e-80 | 246 |
Find 125 sgRNAs with CRISPR-Local
Find 666 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCCCTAATTCTCCGTTTC+CGG | 0.203519 | 4_1:+5914057 | Msa0531810:CDS |
| AGCACCGGAAACGGAGAATT+AGG | 0.227019 | 4_1:-5914061 | None:intergenic |
| GAGGGATTTGAATTGGGATT+AGG | 0.252506 | 4_1:-5913821 | None:intergenic |
| GGCTCCATGGCGGCGGAAAA+TGG | 0.270075 | 4_1:-5913416 | None:intergenic |
| GGTTGATGGTGGAGGAGAAT+TGG | 0.275733 | 4_1:-5913799 | None:intergenic |
| AGGGATTTGAATTGGGATTA+GGG | 0.281463 | 4_1:-5913820 | None:intergenic |
| TGACGGTGGCGAGGAGGGTG+GGG | 0.290935 | 4_1:-5913598 | None:intergenic |
| AAGTTATTCACCGATGATTC+AGG | 0.291186 | 4_1:+5914096 | Msa0531810:CDS |
| TGATGAAGAGGGATTTGAAT+TGG | 0.309752 | 4_1:-5913828 | None:intergenic |
| TGAATTGGGATTAGGGTTGA+TGG | 0.311785 | 4_1:-5913813 | None:intergenic |
| TGGTTGAGAGGTGGTGGAGG+AGG | 0.331963 | 4_1:-5913487 | None:intergenic |
| TTGAAACCGGGTTGAATGAT+TGG | 0.339552 | 4_1:-5913985 | None:intergenic |
| GTTGATGGTGGAGGAGAATT+GGG | 0.347491 | 4_1:-5913798 | None:intergenic |
| GGTGGTGGAGGAGGGAGGAG+AGG | 0.349199 | 4_1:-5913478 | None:intergenic |
| CAAACTCTGAGTATAATTCT+TGG | 0.351406 | 4_1:-5914236 | None:intergenic |
| TCCCTCCTTGGTTGGTTCTC+CGG | 0.356492 | 4_1:+5913707 | Msa0531810:CDS |
| TTAATAATTTCGATTGAAAC+CGG | 0.362748 | 4_1:-5913998 | None:intergenic |
| CCTCATTCCTCCTCCCTCCT+TGG | 0.365897 | 4_1:+5913695 | Msa0531810:CDS |
| TTCTAAGGATCAAAGGGAAT+TGG | 0.368237 | 4_1:+5914156 | Msa0531810:CDS |
| CAAGAATTATACTCAGAGTT+TGG | 0.369134 | 4_1:+5914237 | Msa0531810:CDS |
| TAAGAGGTTGAGTAATTTGA+TGG | 0.370361 | 4_1:+5914204 | Msa0531810:CDS |
| TTCAGCTAAGGTTCTTGAAC+AGG | 0.375440 | 4_1:+5914321 | Msa0531810:CDS |
| GATGAAGAGGGATTTGAATT+GGG | 0.377075 | 4_1:-5913827 | None:intergenic |
| GGAGGAGGGAGGAGAGGGTT+GGG | 0.378427 | 4_1:-5913472 | None:intergenic |
| GGTGACGGTGGCGAGGAGGG+TGG | 0.386005 | 4_1:-5913600 | None:intergenic |
| TAAGATGAAACAGACTTCTA+AGG | 0.389891 | 4_1:+5914141 | Msa0531810:CDS |
| CGGGTTGAATGATTGGGATT+CGG | 0.392950 | 4_1:-5913978 | None:intergenic |
| AGGTGGTTGAGAGGTGGTGG+AGG | 0.397582 | 4_1:-5913490 | None:intergenic |
| GGGTGGTGGCTCCATGGCGG+CGG | 0.398544 | 4_1:-5913423 | None:intergenic |
| TGGAGGTGGTTGAGAGGTGG+TGG | 0.402522 | 4_1:-5913493 | None:intergenic |
| ACATTCTCCGGCCTCCTCTT+CGG | 0.403736 | 4_1:+5913521 | Msa0531810:CDS |
| GTGACGGTGGCGAGGAGGGT+GGG | 0.404733 | 4_1:-5913599 | None:intergenic |
| GATTGAGAATTTGACTACTT+TGG | 0.405183 | 4_1:+5914288 | Msa0531810:CDS |
| GAGGGGAGAACGGCGGCGAC+CGG | 0.413709 | 4_1:-5913726 | None:intergenic |
| GGTTGAGAGGTGGTGGAGGA+GGG | 0.415031 | 4_1:-5913486 | None:intergenic |
| GACGGTGGCGAGGAGGGTGG+GGG | 0.416853 | 4_1:-5913597 | None:intergenic |
| GTGGTGGAGGAGGGAGGAGA+GGG | 0.430349 | 4_1:-5913477 | None:intergenic |
| GCCGGTGACGGTGGCGAGGA+GGG | 0.433101 | 4_1:-5913603 | None:intergenic |
| ATTCCTCCTCCCTCCTTGGT+TGG | 0.434522 | 4_1:+5913699 | Msa0531810:CDS |
| TGAAACCGGGTTGAATGATT+GGG | 0.436969 | 4_1:-5913984 | None:intergenic |
| GCACCGGAAACGGAGAATTA+GGG | 0.437747 | 4_1:-5914060 | None:intergenic |
| GAGGGAGGAGAGGGTTGGGC+CGG | 0.442761 | 4_1:-5913468 | None:intergenic |
| AACATTGGACCGGCATTTCG+TGG | 0.443927 | 4_1:+5914019 | Msa0531810:CDS |
| TGGAGGAGGGAGGAGAGGGT+TGG | 0.447135 | 4_1:-5913473 | None:intergenic |
| GATAAGAGAAAGAATAAACT+AGG | 0.460094 | 4_1:-5913890 | None:intergenic |
| CCGGCATTTCGTGGACATTA+CGG | 0.460139 | 4_1:+5914028 | Msa0531810:CDS |
| GGAGGAGAATTGGGAGAGAG+AGG | 0.460193 | 4_1:-5913789 | None:intergenic |
| TGAGAGGTGGTGGAGGAGGG+AGG | 0.461649 | 4_1:-5913483 | None:intergenic |
| GGGAAGGACGGAGGGGAGAA+CGG | 0.463104 | 4_1:-5913736 | None:intergenic |
| GGGATTAGGGTTGATGGTGG+AGG | 0.470945 | 4_1:-5913807 | None:intergenic |
| TGAGGTTGAGTGGGGTTGTG+AGG | 0.472152 | 4_1:-5913553 | None:intergenic |
| GGCGTTGATATCGCCGGAGG+GGG | 0.476101 | 4_1:-5913651 | None:intergenic |
| CTGAAGGATATGAGGTTAAG+AGG | 0.476899 | 4_1:+5914188 | Msa0531810:CDS |
| ACCCTCCTCGCCACCGTCAC+CGG | 0.477489 | 4_1:+5913602 | Msa0531810:CDS |
| AAGGACGGAGGGGAGAACGG+CGG | 0.482547 | 4_1:-5913733 | None:intergenic |
| GAATCGTCGGTGAGGTTGAG+TGG | 0.484785 | 4_1:-5913563 | None:intergenic |
| CGAAATTATTAACATTGGAC+CGG | 0.486993 | 4_1:+5914009 | Msa0531810:CDS |
| TGACAATCAAGCACCGGAAA+CGG | 0.487508 | 4_1:-5914070 | None:intergenic |
| AGAAGGTGAAGATGATGAAG+AGG | 0.491499 | 4_1:-5913840 | None:intergenic |
| TCAATCGAAATTATTAACAT+TGG | 0.494503 | 4_1:+5914004 | Msa0531810:CDS |
| GGAGAGGGTTGGGCCGGAGA+TGG | 0.496307 | 4_1:-5913462 | None:intergenic |
| ACAGACTTCTAAGGATCAAA+GGG | 0.497223 | 4_1:+5914150 | Msa0531810:CDS |
| GATGAGACGACGGAGGGTGG+TGG | 0.504672 | 4_1:-5913672 | None:intergenic |
| GAGGTTGAGTGGGGTTGTGA+GGG | 0.505771 | 4_1:-5913552 | None:intergenic |
| CAAGGAGGGAGGAGGAATGA+GGG | 0.506473 | 4_1:-5913694 | None:intergenic |
| GAGGCCGGAGAATGTGGAAG+TGG | 0.508769 | 4_1:-5913513 | None:intergenic |
| CCAAGGAGGGAGGAGGAATG+AGG | 0.510220 | 4_1:-5913695 | None:intergenic |
| TTCACGGAGGGAAGGACGGA+GGG | 0.514207 | 4_1:-5913744 | None:intergenic |
| GGAGAATGTGGAAGTGGAGG+TGG | 0.514993 | 4_1:-5913507 | None:intergenic |
| ATGAGGTGATTGAGAATTCA+CGG | 0.515113 | 4_1:-5913760 | None:intergenic |
| AAGTGGAGGTGGTTGAGAGG+TGG | 0.515608 | 4_1:-5913496 | None:intergenic |
| AATCGTCGGTGAGGTTGAGT+GGG | 0.518126 | 4_1:-5913562 | None:intergenic |
| ACCTCCACTTCCACATTCTC+CGG | 0.519836 | 4_1:+5913509 | Msa0531810:CDS |
| GAACCAACCAAGGAGGGAGG+AGG | 0.521865 | 4_1:-5913702 | None:intergenic |
| GAAGGTGAAGATGATGAAGA+GGG | 0.522910 | 4_1:-5913839 | None:intergenic |
| AACAGACTTCTAAGGATCAA+AGG | 0.525556 | 4_1:+5914149 | Msa0531810:CDS |
| TGTTTGTGCTGAAGGATATG+AGG | 0.526001 | 4_1:+5914180 | Msa0531810:CDS |
| AGAGAAAGGAGGAAGTGGTG+AGG | 0.527598 | 4_1:-5913628 | None:intergenic |
| ACCGGAGAACCAACCAAGGA+GGG | 0.529014 | 4_1:-5913708 | None:intergenic |
| GAAGAGGAGGCCGGAGAATG+TGG | 0.531295 | 4_1:-5913519 | None:intergenic |
| ATTGGGATTAGGGTTGATGG+TGG | 0.533376 | 4_1:-5913810 | None:intergenic |
| GGTGGTGTCGGAGGAATCGT+CGG | 0.540121 | 4_1:-5913576 | None:intergenic |
| GAGTAATTTGATGGGTTCTG+AGG | 0.546646 | 4_1:+5914213 | Msa0531810:CDS |
| GGTTGAACAGAGTTCAGCTA+AGG | 0.548443 | 4_1:+5914309 | Msa0531810:CDS |
| GGAGGAAGTGGTGAGGAAGC+CGG | 0.549037 | 4_1:-5913621 | None:intergenic |
| CCGTAATGTCCACGAAATGC+CGG | 0.551028 | 4_1:-5914028 | None:intergenic |
| AGGGATGAGACGACGGAGGG+TGG | 0.555698 | 4_1:-5913675 | None:intergenic |
| CGGTTTGAAATTGATAAACA+CGG | 0.556504 | 4_1:-5913958 | None:intergenic |
| GTGGCGTTGATATCGCCGGA+GGG | 0.559198 | 4_1:-5913653 | None:intergenic |
| GGGTGACGTGGCCGAAGAGG+AGG | 0.560284 | 4_1:-5913532 | None:intergenic |
| ATAAGAGAAAGAATAAACTA+GGG | 0.562165 | 4_1:-5913889 | None:intergenic |
| TAATAATTTCGATTGAAACC+GGG | 0.565915 | 4_1:-5913997 | None:intergenic |
| AGCCGGTGACGGTGGCGAGG+AGG | 0.566651 | 4_1:-5913604 | None:intergenic |
| GGTGGCGTTGATATCGCCGG+AGG | 0.568236 | 4_1:-5913654 | None:intergenic |
| AGTGGTGAGGAAGCCGGTGA+CGG | 0.572667 | 4_1:-5913615 | None:intergenic |
| GCCGGAGAATGTGGAAGTGG+AGG | 0.575664 | 4_1:-5913510 | None:intergenic |
| TTATCGTCGTCCTGAATCAT+CGG | 0.576845 | 4_1:-5914106 | None:intergenic |
| ATGAGGGATGAGACGACGGA+GGG | 0.577403 | 4_1:-5913678 | None:intergenic |
| AGAATTCACGGAGGGAAGGA+CGG | 0.578218 | 4_1:-5913748 | None:intergenic |
| AAGAGGTTGAGTAATTTGAT+GGG | 0.579839 | 4_1:+5914205 | Msa0531810:CDS |
| CGAATCCCAATCATTCAACC+CGG | 0.581144 | 4_1:+5913979 | Msa0531810:CDS |
| GACGTGGCCGAAGAGGAGGC+CGG | 0.582804 | 4_1:-5913528 | None:intergenic |
| GAATTATACTCAGAGTTTGG+AGG | 0.584124 | 4_1:+5914240 | Msa0531810:CDS |
| GAATTGGATGTTTGTGCTGA+AGG | 0.584667 | 4_1:+5914172 | Msa0531810:CDS |
| GGAGAGAGAGGAGAGAGATG+AGG | 0.585087 | 4_1:-5913777 | None:intergenic |
| GGAAGCCGGTGACGGTGGCG+AGG | 0.593369 | 4_1:-5913607 | None:intergenic |
| ATTGAGAATTCACGGAGGGA+AGG | 0.593655 | 4_1:-5913752 | None:intergenic |
| TGAGGGTGACGTGGCCGAAG+AGG | 0.593756 | 4_1:-5913535 | None:intergenic |
| TCACGGAGGGAAGGACGGAG+GGG | 0.594954 | 4_1:-5913743 | None:intergenic |
| CTTAACTGACAATCAAGCAC+CGG | 0.595833 | 4_1:-5914076 | None:intergenic |
| TGGAAGTGGAGGTGGTTGAG+AGG | 0.600806 | 4_1:-5913499 | None:intergenic |
| GGTGAGGAAGCCGGTGACGG+TGG | 0.603918 | 4_1:-5913612 | None:intergenic |
| ATTCACGGAGGGAAGGACGG+AGG | 0.609111 | 4_1:-5913745 | None:intergenic |
| GTGGGGTTGTGAGGGTGACG+TGG | 0.615643 | 4_1:-5913544 | None:intergenic |
| GACCGGAGAACCAACCAAGG+AGG | 0.617300 | 4_1:-5913709 | None:intergenic |
| GGAGAACCAACCAAGGAGGG+AGG | 0.620479 | 4_1:-5913705 | None:intergenic |
| GGTGGTGGCGTTGATATCGC+CGG | 0.624177 | 4_1:-5913657 | None:intergenic |
| AGGAATGAGGGATGAGACGA+CGG | 0.635189 | 4_1:-5913682 | None:intergenic |
| TGGCGTTGATATCGCCGGAG+GGG | 0.635277 | 4_1:-5913652 | None:intergenic |
| GGCGACCGGAGAACCAACCA+AGG | 0.636303 | 4_1:-5913712 | None:intergenic |
| ATCGTCGGTGAGGTTGAGTG+GGG | 0.665011 | 4_1:-5913561 | None:intergenic |
| TGTCGGAGGAATCGTCGGTG+AGG | 0.668295 | 4_1:-5913571 | None:intergenic |
| GGTGATTGAGAATTCACGGA+GGG | 0.669306 | 4_1:-5913756 | None:intergenic |
| AATGAGGGATGAGACGACGG+AGG | 0.680231 | 4_1:-5913679 | None:intergenic |
| AGGTGATTGAGAATTCACGG+AGG | 0.780130 | 4_1:-5913757 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTAAAAAATAAACTTTTT+GGG | + | chr4_1:5914784-5914803 | Msa0531810:intron | 10.0% |
| !!! | AATGATTTTATTTAGAAATA+TGG | + | chr4_1:5915057-5915076 | Msa0531810:intron | 10.0% |
| !!! | TGTTTTAGTTTTAAAATTTT+CGG | + | chr4_1:5916740-5916759 | Msa0531810:intron | 10.0% |
| !!! | ATAATAATTTTATATTCCAA+AGG | - | chr4_1:5917113-5917132 | None:intergenic | 10.0% |
| !!! | AAGAATTTTTCTTAAAAAAT+CGG | - | chr4_1:5917461-5917480 | None:intergenic | 10.0% |
| !!! | GATAATATTTTTTAATTCAA+TGG | + | chr4_1:5918619-5918638 | Msa0531810:intron | 10.0% |
| !!! | AATTGTAAATGTTTTTTTTA+AGG | - | chr4_1:5919242-5919261 | None:intergenic | 10.0% |
| !!! | CAAATTTCATTTTTTAAAAA+TGG | - | chr4_1:5919511-5919530 | None:intergenic | 10.0% |
| !!! | ATTGATTTTATTTAGGAATA+TGG | + | chr4_1:5914673-5914692 | Msa0531810:intron | 15.0% |
| !!! | CCAAAAAGTTTATTTTTTAA+AGG | - | chr4_1:5914786-5914805 | None:intergenic | 15.0% |
| !!! | CCTTTAAAAAATAAACTTTT+TGG | + | chr4_1:5914783-5914802 | Msa0531810:intron | 15.0% |
| !! | TGATTAAATTAACAATTTAG+TGG | + | chr4_1:5914989-5915008 | Msa0531810:intron | 15.0% |
| !!! | TTTTGACTTCTTTTTATTTT+TGG | - | chr4_1:5915512-5915531 | None:intergenic | 15.0% |
| !!! | ATTATGATTTGGATTTTTAT+AGG | + | chr4_1:5916532-5916551 | Msa0531810:intron | 15.0% |
| !! | AAAAAATATATCAGAGTATA+TGG | - | chr4_1:5917218-5917237 | None:intergenic | 15.0% |
| !!! | TTTTGTTGATATATTTATTC+AGG | + | chr4_1:5917649-5917668 | Msa0531810:intron | 15.0% |
| !! | TTTGTTGATATATTTATTCA+GGG | + | chr4_1:5917650-5917669 | Msa0531810:intron | 15.0% |
| !!! | TAACTAAAATTAAAAGTATG+TGG | + | chr4_1:5917774-5917793 | Msa0531810:intron | 15.0% |
| !!! | TGTTATTGTATTTTAGTTTT+TGG | + | chr4_1:5918246-5918265 | Msa0531810:intron | 15.0% |
| !! | AATATATATTCTTCAATGAA+GGG | - | chr4_1:5918561-5918580 | None:intergenic | 15.0% |
| !! | AAATATATATTCTTCAATGA+AGG | - | chr4_1:5918562-5918581 | None:intergenic | 15.0% |
| !!! | TATTTTTACCTAAAATTGAT+CGG | + | chr4_1:5918577-5918596 | Msa0531810:intron | 15.0% |
| !! | AAAAACCCAAATTTAAAAAT+GGG | - | chr4_1:5919536-5919555 | None:intergenic | 15.0% |
| !!! | TATTTTAAAATGAGATGAAA+AGG | - | chr4_1:5919591-5919610 | None:intergenic | 15.0% |
| !! | AAACGATTATTATTTAGAAA+CGG | - | chr4_1:5919715-5919734 | None:intergenic | 15.0% |
| !! | CCAATATAGAAAATTTATAT+CGG | + | chr4_1:5919878-5919897 | Msa0531810:intron | 15.0% |
| !!! | AAATTTTTTTTGTATTAGAG+CGG | - | chr4_1:5920248-5920267 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTCAAAAATAAGG+AGG | - | chr4_1:5920350-5920369 | None:intergenic | 15.0% |
| !! | ATAAGAGAAAGAATAAACTA+GGG | - | chr4_1:5913892-5913911 | None:intergenic | 20.0% |
| !! | TTAATAATTTCGATTGAAAC+CGG | - | chr4_1:5914001-5914020 | None:intergenic | 20.0% |
| !! | TCAATCGAAATTATTAACAT+TGG | + | chr4_1:5914004-5914023 | Msa0531810:CDS | 20.0% |
| !! | ATATGTAGTTCAATATCATT+AGG | + | chr4_1:5914406-5914425 | Msa0531810:intron | 20.0% |
| !!! | ATCATTAGGGTTTTAAATAA+AGG | - | chr4_1:5914576-5914595 | None:intergenic | 20.0% |
| !!! | ATTTTATTTAGGAATATGGT+GGG | + | chr4_1:5914677-5914696 | Msa0531810:intron | 20.0% |
| !! | AATTTAGTGGTATAAAAGTA+GGG | + | chr4_1:5915002-5915021 | Msa0531810:intron | 20.0% |
| !!! | AATACGTTTATTTTTCACAA+GGG | - | chr4_1:5915167-5915186 | None:intergenic | 20.0% |
| !! | TTGTGAAAAATAAACGTATT+GGG | + | chr4_1:5915167-5915186 | Msa0531810:intron | 20.0% |
| !!! | TCAGTTTAGTTTTTCATTTT+TGG | - | chr4_1:5915535-5915554 | None:intergenic | 20.0% |
| !! | AGAATTGAGAAATTATGATT+TGG | + | chr4_1:5916521-5916540 | Msa0531810:intron | 20.0% |
| !!! | AAGTACAATAATTTTCTATC+AGG | - | chr4_1:5916558-5916577 | None:intergenic | 20.0% |
| !!! | TTTTTAAGAAAAATTCTTGC+AGG | + | chr4_1:5917463-5917482 | Msa0531810:intron | 20.0% |
| !! | ATAAGAATAAGAATGAACAT+CGG | - | chr4_1:5917697-5917716 | None:intergenic | 20.0% |
| !! | AGAATATATCTTTGAATGAA+GGG | - | chr4_1:5918443-5918462 | None:intergenic | 20.0% |
| !! | ATATATATTCTTCAATGAAG+GGG | - | chr4_1:5918560-5918579 | None:intergenic | 20.0% |
| !! | TGTTTATCAATTTGAAAACA+TGG | + | chr4_1:5918687-5918706 | Msa0531810:intron | 20.0% |
| !! | ACATGATGTTTATAAAATGA+AGG | - | chr4_1:5918804-5918823 | None:intergenic | 20.0% |
| !!! | TGTGTTAAGTTGAATATTAA+TGG | + | chr4_1:5918910-5918929 | Msa0531810:intron | 20.0% |
| !!! | GTGTTAAGTTGAATATTAAT+GGG | + | chr4_1:5918911-5918930 | Msa0531810:intron | 20.0% |
| !! | GTTAAAAGCTGAATAAATTT+AGG | - | chr4_1:5919115-5919134 | None:intergenic | 20.0% |
| !!! | ACAACAACGTTAAAATTTTT+AGG | + | chr4_1:5919137-5919156 | Msa0531810:intron | 20.0% |
| !!! | CAACAACGTTAAAATTTTTA+GGG | + | chr4_1:5919138-5919157 | Msa0531810:intron | 20.0% |
| !!! | TGTTTTTTTTAAGGTAAATC+AGG | - | chr4_1:5919233-5919252 | None:intergenic | 20.0% |
| !! | AAATTCTTAGATACTTTGAT+CGG | + | chr4_1:5919329-5919348 | Msa0531810:intron | 20.0% |
| !!! | TTTGTTCCCATTTTTAAATT+TGG | + | chr4_1:5919527-5919546 | Msa0531810:intron | 20.0% |
| !!! | TTGTTCCCATTTTTAAATTT+GGG | + | chr4_1:5919528-5919547 | Msa0531810:intron | 20.0% |
| !! | CAAAAACCCAAATTTAAAAA+TGG | - | chr4_1:5919537-5919556 | None:intergenic | 20.0% |
| !!! | CCGATATAAATTTTCTATAT+TGG | - | chr4_1:5919881-5919900 | None:intergenic | 20.0% |
| !!! | AATATTGGCTTTTCAAAAAT+TGG | - | chr4_1:5920097-5920116 | None:intergenic | 20.0% |
| !!! | TGATTTTTACACTCAAATTT+AGG | + | chr4_1:5920211-5920230 | Msa0531810:intron | 20.0% |
| !!! | GATTTTTACACTCAAATTTA+GGG | + | chr4_1:5920212-5920231 | Msa0531810:intron | 20.0% |
| !!! | AAAATTTGTGTAGAGATTTT+AGG | + | chr4_1:5920261-5920280 | Msa0531810:intron | 20.0% |
| !!! | GACTAAAATGAAAAGTTTTT+AGG | - | chr4_1:5920394-5920413 | None:intergenic | 20.0% |
| !!! | AAATTGAAAGATTTTGGAAA+CGG | - | chr4_1:5921214-5921233 | None:intergenic | 20.0% |
| !! | TAAATCAATTTCGTAATAGA+TGG | - | chr4_1:5921425-5921444 | None:intergenic | 20.0% |
| !!! | TTAAAAAAACCTTTTGCATT+TGG | + | chr4_1:5922662-5922681 | Msa0531810:intron | 20.0% |
| !! | GAAAAGTTTATATACGTTTA+TGG | + | chr4_1:5922831-5922850 | Msa0531810:intron | 20.0% |
| !! | CAGAACTTATGAAATATTTA+AGG | + | chr4_1:5922877-5922896 | Msa0531810:intron | 20.0% |
| ! | GATAAGAGAAAGAATAAACT+AGG | - | chr4_1:5913893-5913912 | None:intergenic | 25.0% |
| !!! | TGTGAATTTTGATCAGAAAT+TGG | - | chr4_1:5913920-5913939 | None:intergenic | 25.0% |
| ! | TAATAATTTCGATTGAAACC+GGG | - | chr4_1:5914000-5914019 | None:intergenic | 25.0% |
| !!! | TAGTTTACTTTGTTTTTGTG+TGG | + | chr4_1:5914345-5914364 | Msa0531810:intron | 25.0% |
| ! | AGTTCAATATCATTAGGATT+AGG | + | chr4_1:5914412-5914431 | Msa0531810:intron | 25.0% |
| ! | GTTCAATATCATTAGGATTA+GGG | + | chr4_1:5914413-5914432 | Msa0531810:intron | 25.0% |
| !!! | AAGCGCTATTGATTTTATTT+AGG | + | chr4_1:5914666-5914685 | Msa0531810:intron | 25.0% |
| !!! | GATTTTATTTAGGAATATGG+TGG | + | chr4_1:5914676-5914695 | Msa0531810:intron | 25.0% |
| ! | CAATTTAGTGGTATAAAAGT+AGG | + | chr4_1:5915001-5915020 | Msa0531810:intron | 25.0% |
| !!! | CAATACGTTTATTTTTCACA+AGG | - | chr4_1:5915168-5915187 | None:intergenic | 25.0% |
| ! | CTTGTGAAAAATAAACGTAT+TGG | + | chr4_1:5915166-5915185 | Msa0531810:intron | 25.0% |
| ! | AAAGGACAAAAATGATAAGA+TGG | - | chr4_1:5915341-5915360 | None:intergenic | 25.0% |
| ! | TATAGTCACCATTTAGATTT+CGG | - | chr4_1:5916351-5916370 | None:intergenic | 25.0% |
| ! | AGAAAAATTAAACTCTGCAT+AGG | - | chr4_1:5916585-5916604 | None:intergenic | 25.0% |
| !! | ATCGAAGATATTTTATTCTG+GGG | - | chr4_1:5916671-5916690 | None:intergenic | 25.0% |
| !! | CATCGAAGATATTTTATTCT+GGG | - | chr4_1:5916672-5916691 | None:intergenic | 25.0% |
| ! | GAAATTACTTCTATTCTTTC+AGG | + | chr4_1:5916695-5916714 | Msa0531810:intron | 25.0% |
| ! | TTGATATATTCTTCTTTCGA+GGG | - | chr4_1:5916797-5916816 | None:intergenic | 25.0% |
| ! | TTTGATATATTCTTCTTTCG+AGG | - | chr4_1:5916798-5916817 | None:intergenic | 25.0% |
| ! | CAATTTCTTGAAACTGATTA+TGG | + | chr4_1:5917034-5917053 | Msa0531810:intron | 25.0% |
| !!! | AAATGCGTACTTTTTATATC+TGG | - | chr4_1:5917245-5917264 | None:intergenic | 25.0% |
| !! | TCAGTTTTCAAAACATTACA+TGG | - | chr4_1:5917303-5917322 | None:intergenic | 25.0% |
| ! | AACTGAAGTAATAATCAAAC+TGG | + | chr4_1:5917317-5917336 | Msa0531810:intron | 25.0% |
| ! | AATTAATGTTTCATTACCAC+CGG | - | chr4_1:5917386-5917405 | None:intergenic | 25.0% |
| ! | ATCAATATTATACTTACAGC+TGG | + | chr4_1:5917800-5917819 | Msa0531810:intron | 25.0% |
| ! | ATGCATTGCATTAATATTGA+TGG | + | chr4_1:5918029-5918048 | Msa0531810:intron | 25.0% |
| ! | ATATGACAATCAACAATGTT+CGG | + | chr4_1:5918112-5918131 | Msa0531810:intron | 25.0% |
| ! | CAGAATATATCTTTGAATGA+AGG | - | chr4_1:5918444-5918463 | None:intergenic | 25.0% |
| !! | ATAAAGCACCTTAAAAACTA+CGG | - | chr4_1:5918467-5918486 | None:intergenic | 25.0% |
| ! | CTATGTTTGCAATAACTATT+TGG | + | chr4_1:5918717-5918736 | Msa0531810:intron | 25.0% |
| ! | ATCAAAAGAGTGAATATTAC+CGG | - | chr4_1:5918842-5918861 | None:intergenic | 25.0% |
| ! | TTGAATATTAATGGGATTTG+TGG | + | chr4_1:5918919-5918938 | Msa0531810:intron | 25.0% |
| !! | CATCTCATTTAAGTGTTTTT+GGG | - | chr4_1:5919063-5919082 | None:intergenic | 25.0% |
| !! | TCATCTCATTTAAGTGTTTT+TGG | - | chr4_1:5919064-5919083 | None:intergenic | 25.0% |
| ! | AATCTCTTCTAATTTAACCA+AGG | + | chr4_1:5919088-5919107 | Msa0531810:intron | 25.0% |
| ! | TATTAATGTATGCAAAATGC+TGG | - | chr4_1:5919304-5919323 | None:intergenic | 25.0% |
| ! | AATTCTTAGATACTTTGATC+GGG | + | chr4_1:5919330-5919349 | Msa0531810:intron | 25.0% |
| ! | TTTATAGATCGATTGAAGTT+TGG | - | chr4_1:5919461-5919480 | None:intergenic | 25.0% |
| ! | TCCAATTCTACAATCAATAT+TGG | - | chr4_1:5920112-5920131 | None:intergenic | 25.0% |
| !!! | TTAATTGCTTTCTAGTTGAA+TGG | + | chr4_1:5920143-5920162 | Msa0531810:intron | 25.0% |
| !! | AATAGAAGTGATTGTTTTCT+TGG | - | chr4_1:5920628-5920647 | None:intergenic | 25.0% |
| ! | TAAAACTTTAGACACTAATC+TGG | - | chr4_1:5920960-5920979 | None:intergenic | 25.0% |
| ! | CTTAAGCTTTCTATTTACAA+TGG | + | chr4_1:5921169-5921188 | Msa0531810:intron | 25.0% |
| ! | AACCTGTTAAAAGTTGAAAA+TGG | - | chr4_1:5921304-5921323 | None:intergenic | 25.0% |
| !!! | ATACGAAAAGCATTTAAAGA+AGG | + | chr4_1:5922237-5922256 | Msa0531810:intron | 25.0% |
| !!! | TACGAAAAGCATTTAAAGAA+GGG | + | chr4_1:5922238-5922257 | Msa0531810:intron | 25.0% |
| ! | TCTTTGTTAAAGAATTGAAC+TGG | + | chr4_1:5922457-5922476 | Msa0531810:intron | 25.0% |
| ! | CAATTTGAATTAACTTCTAG+CGG | + | chr4_1:5922618-5922637 | Msa0531810:intron | 25.0% |
| ! | CATTGTGAATTAGTATTTAG+CGG | + | chr4_1:5922699-5922718 | Msa0531810:intron | 25.0% |
| ! | ATTGTGAATTAGTATTTAGC+GGG | + | chr4_1:5922700-5922719 | Msa0531810:intron | 25.0% |
| !! | ATAAACTTTTCTCGAACATT+CGG | - | chr4_1:5922822-5922841 | None:intergenic | 25.0% |
| AATGAAGAAGAAGAAGAAGA+AGG | - | chr4_1:5913860-5913879 | None:intergenic | 30.0% | |
| ! | CGGTTTGAAATTGATAAACA+CGG | - | chr4_1:5913961-5913980 | None:intergenic | 30.0% |
| CGAAATTATTAACATTGGAC+CGG | + | chr4_1:5914009-5914028 | Msa0531810:CDS | 30.0% | |
| TAAGATGAAACAGACTTCTA+AGG | + | chr4_1:5914141-5914160 | Msa0531810:CDS | 30.0% | |
| TAAGAGGTTGAGTAATTTGA+TGG | + | chr4_1:5914204-5914223 | Msa0531810:CDS | 30.0% | |
| AAGAGGTTGAGTAATTTGAT+GGG | + | chr4_1:5914205-5914224 | Msa0531810:CDS | 30.0% | |
| CAAACTCTGAGTATAATTCT+TGG | - | chr4_1:5914239-5914258 | None:intergenic | 30.0% | |
| CAAGAATTATACTCAGAGTT+TGG | + | chr4_1:5914237-5914256 | Msa0531810:CDS | 30.0% | |
| GATTGAGAATTTGACTACTT+TGG | + | chr4_1:5914288-5914307 | Msa0531810:CDS | 30.0% | |
| TAGGATTAGGGTTTAAATTG+TGG | + | chr4_1:5914425-5914444 | Msa0531810:intron | 30.0% | |
| ! | TTTTGGATACCATTATGTTG+CGG | + | chr4_1:5914543-5914562 | Msa0531810:intron | 30.0% |
| CATCATCATCATCATCATTA+GGG | - | chr4_1:5914589-5914608 | None:intergenic | 30.0% | |
| ACATCATCATCATCATCATT+AGG | - | chr4_1:5914590-5914609 | None:intergenic | 30.0% | |
| ! | GATGTTGATTAGAAATGTAG+TGG | + | chr4_1:5914605-5914624 | Msa0531810:intron | 30.0% |
| AAATGTAGTGGTATAAACGT+AGG | + | chr4_1:5914617-5914636 | Msa0531810:intron | 30.0% | |
| AATGTAGTGGTATAAACGTA+GGG | + | chr4_1:5914618-5914637 | Msa0531810:intron | 30.0% | |
| ! | AAATTCAGTTTTCACAACCA+GGG | - | chr4_1:5914852-5914871 | None:intergenic | 30.0% |
| !!! | GTAGTCATGTGTTGTTTTAA+CGG | + | chr4_1:5914878-5914897 | Msa0531810:intron | 30.0% |
| TATCATGTATCCTTCAATCA+GGG | - | chr4_1:5914942-5914961 | None:intergenic | 30.0% | |
| ATATCATGTATCCTTCAATC+AGG | - | chr4_1:5914943-5914962 | None:intergenic | 30.0% | |
| TGAAGGATACATGATATATG+TGG | + | chr4_1:5914946-5914965 | Msa0531810:intron | 30.0% | |
| AGACATCAAAAAGGAAGAAA+AGG | - | chr4_1:5915265-5915284 | None:intergenic | 30.0% | |
| ! | TCTTCCTTTTTGATGTCTTT+CGG | + | chr4_1:5915267-5915286 | Msa0531810:intron | 30.0% |
| AAGGCAATGGAAAAGTTTAA+AGG | - | chr4_1:5915359-5915378 | None:intergenic | 30.0% | |
| ! | TTTAAACTTTTCCATTGCCT+TGG | + | chr4_1:5915358-5915377 | Msa0531810:intron | 30.0% |
| AAGAACAAAACAGAAACAGA+GGG | + | chr4_1:5915573-5915592 | Msa0531810:intron | 30.0% | |
| !! | AAGAAAAAGCGTTCGTAATT+TGG | + | chr4_1:5915798-5915817 | Msa0531810:intron | 30.0% |
| !! | AGAAAAAGCGTTCGTAATTT+GGG | + | chr4_1:5915799-5915818 | Msa0531810:intron | 30.0% |
| TAGAGCTATGTTGTTAAAAG+CGG | - | chr4_1:5915965-5915984 | None:intergenic | 30.0% | |
| ! | TACACCAAGTTTGTCTTTTT+GGG | - | chr4_1:5915991-5916010 | None:intergenic | 30.0% |
| ! | TTACACCAAGTTTGTCTTTT+TGG | - | chr4_1:5915992-5916011 | None:intergenic | 30.0% |
| TATCCTGATTGAGTACAAAT+TGG | + | chr4_1:5916126-5916145 | Msa0531810:intron | 30.0% | |
| AAGGTATGCAATAGTAAATG+TGG | + | chr4_1:5916152-5916171 | Msa0531810:intron | 30.0% | |
| CAATAAACCCGAAATCTAAA+TGG | + | chr4_1:5916340-5916359 | Msa0531810:intron | 30.0% | |
| ATAGTCACCATTTAGATTTC+GGG | - | chr4_1:5916350-5916369 | None:intergenic | 30.0% | |
| ! | TATCCTAATTTTGTAGAACG+AGG | + | chr4_1:5916420-5916439 | Msa0531810:intron | 30.0% |
| ! | TTCTTTTATCAACTGTGAAC+AGG | + | chr4_1:5916601-5916620 | Msa0531810:intron | 30.0% |
| ! | CCATCGAAGATATTTTATTC+TGG | - | chr4_1:5916673-5916692 | None:intergenic | 30.0% |
| CCAGAATAAAATATCTTCGA+TGG | + | chr4_1:5916670-5916689 | Msa0531810:intron | 30.0% | |
| GAATAAAATATCTTCGATGG+TGG | + | chr4_1:5916673-5916692 | Msa0531810:intron | 30.0% | |
| ATATATCAAACCAGTCATGT+TGG | + | chr4_1:5916808-5916827 | Msa0531810:intron | 30.0% | |
| ! | TTTTTCACTTTACATGAGCA+AGG | + | chr4_1:5916897-5916916 | Msa0531810:intron | 30.0% |
| ! | ATTTTCACCGAATTCTTGTA+GGG | + | chr4_1:5917533-5917552 | Msa0531810:intron | 30.0% |
| AATGTACACATGTTACAAGT+TGG | + | chr4_1:5917571-5917590 | Msa0531810:intron | 30.0% | |
| ATCAACATTCACTATTAAGC+TGG | - | chr4_1:5917615-5917634 | None:intergenic | 30.0% | |
| GTTGATATATTTATTCAGGG+AGG | + | chr4_1:5917653-5917672 | Msa0531810:intron | 30.0% | |
| !! | TTTTCCCGTTTTGAACTTTT+GGG | + | chr4_1:5918191-5918210 | Msa0531810:intron | 30.0% |
| GTTACTCTTCAATTTGAAGA+AGG | + | chr4_1:5918268-5918287 | Msa0531810:intron | 30.0% | |
| ACACAAACATAGAATACAGT+TGG | - | chr4_1:5918402-5918421 | None:intergenic | 30.0% | |
| ! | ATATTCTGCCGTAGTTTTTA+AGG | + | chr4_1:5918456-5918475 | Msa0531810:intron | 30.0% |
| ! | TTTTACCTAAAATTGATCGG+AGG | + | chr4_1:5918580-5918599 | Msa0531810:intron | 30.0% |
| ! | CAATAACTATTTGGTGAATC+TGG | + | chr4_1:5918726-5918745 | Msa0531810:intron | 30.0% |
| AATATTACCGGAAGTTAGAT+CGG | - | chr4_1:5918830-5918849 | None:intergenic | 30.0% | |
| ! | ACATACAGTGAGCAATTTTA+CGG | - | chr4_1:5920068-5920087 | None:intergenic | 30.0% |
| AAAATTGCTCACTGTATGTT+TGG | + | chr4_1:5920069-5920088 | Msa0531810:intron | 30.0% | |
| ! | GCCAATATTGATTGTAGAAT+TGG | + | chr4_1:5920108-5920127 | Msa0531810:intron | 30.0% |
| AAAAGTGAGTTCAACGATAA+GGG | - | chr4_1:5920526-5920545 | None:intergenic | 30.0% | |
| AAAAAGTGAGTTCAACGATA+AGG | - | chr4_1:5920527-5920546 | None:intergenic | 30.0% | |
| !!! | TGATTGTTTTCTTGGTTTTG+TGG | - | chr4_1:5920620-5920639 | None:intergenic | 30.0% |
| ! | TCTTTTCTTGTCTTCTGTTT+AGG | + | chr4_1:5920677-5920696 | Msa0531810:intron | 30.0% |
| ! | TTCTGTTTAGGTTAACCTAT+TGG | + | chr4_1:5920689-5920708 | Msa0531810:intron | 30.0% |
| TATGTGAAGGATAATGCTTT+CGG | - | chr4_1:5920810-5920829 | None:intergenic | 30.0% | |
| ! | TTAAGAATGAGAGTATGTGA+AGG | - | chr4_1:5920823-5920842 | None:intergenic | 30.0% |
| ! | CGTTTTATCCACAAGATATA+AGG | + | chr4_1:5920868-5920887 | Msa0531810:intron | 30.0% |
| ! | CTTGATTTTAAGCGTAGTAA+CGG | + | chr4_1:5921013-5921032 | Msa0531810:intron | 30.0% |
| !!! | TTCACAATCTTTTCGAGTTT+GGG | - | chr4_1:5921049-5921068 | None:intergenic | 30.0% |
| !!! | ATTCACAATCTTTTCGAGTT+TGG | - | chr4_1:5921050-5921069 | None:intergenic | 30.0% |
| AAGCTTTCTATTTACAATGG+TGG | + | chr4_1:5921172-5921191 | Msa0531810:intron | 30.0% | |
| CTTTAACGAACTTGCAATTA+GGG | + | chr4_1:5921239-5921258 | Msa0531810:intron | 30.0% | |
| TTTAACGAACTTGCAATTAG+GGG | + | chr4_1:5921240-5921259 | Msa0531810:intron | 30.0% | |
| !! | AGCCATTTTCAACTTTTAAC+AGG | + | chr4_1:5921299-5921318 | Msa0531810:intron | 30.0% |
| ATTTATGTACTCCAAGTCTT+TGG | + | chr4_1:5921440-5921459 | Msa0531810:intron | 30.0% | |
| AAAACAAACTTCCAAAGACT+TGG | - | chr4_1:5921454-5921473 | None:intergenic | 30.0% | |
| !!! | CTTTGGAAGTTTGTTTTTTC+CGG | + | chr4_1:5921457-5921476 | Msa0531810:intron | 30.0% |
| CTTCAAAACATCAAGACATA+AGG | - | chr4_1:5922088-5922107 | None:intergenic | 30.0% | |
| ! | AGAATGGAAGAACTTTTGTA+TGG | + | chr4_1:5922150-5922169 | Msa0531810:intron | 30.0% |
| !! | AAAAGCATTTAAAGAAGGGT+TGG | + | chr4_1:5922242-5922261 | Msa0531810:intron | 30.0% |
| TTGACTACATAAAATGCAGA+AGG | + | chr4_1:5922331-5922350 | Msa0531810:intron | 30.0% | |
| GCGACAAAGATACTTATAAT+TGG | + | chr4_1:5922353-5922372 | Msa0531810:intron | 30.0% | |
| ATTGAACTGGACATATATTC+TGG | + | chr4_1:5922470-5922489 | Msa0531810:intron | 30.0% | |
| ATATGTGATCCAAATGCAAA+AGG | - | chr4_1:5922674-5922693 | None:intergenic | 30.0% | |
| CGCTAAATACTAATTCACAA+TGG | - | chr4_1:5922701-5922720 | None:intergenic | 30.0% | |
| ! | TAAACTTTTCTCGAACATTC+GGG | - | chr4_1:5922821-5922840 | None:intergenic | 30.0% |
| !!! | AGATGGCGATTTTTTGTAAC+GGG | - | chr4_1:5913448-5913467 | None:intergenic | 35.0% |
| !!! | GAGATGGCGATTTTTTGTAA+CGG | - | chr4_1:5913449-5913468 | None:intergenic | 35.0% |
| TTACAAAAAATCGCCATCTC+CGG | + | chr4_1:5913449-5913468 | Msa0531810:CDS | 35.0% | |
| ATGAGGTGATTGAGAATTCA+CGG | - | chr4_1:5913763-5913782 | None:intergenic | 35.0% | |
| AGGGATTTGAATTGGGATTA+GGG | - | chr4_1:5913823-5913842 | None:intergenic | 35.0% | |
| GATGAAGAGGGATTTGAATT+GGG | - | chr4_1:5913830-5913849 | None:intergenic | 35.0% | |
| TGATGAAGAGGGATTTGAAT+TGG | - | chr4_1:5913831-5913850 | None:intergenic | 35.0% | |
| AAGTTATTCACCGATGATTC+AGG | + | chr4_1:5914096-5914115 | Msa0531810:CDS | 35.0% | |
| ! | AACAGACTTCTAAGGATCAA+AGG | + | chr4_1:5914149-5914168 | Msa0531810:CDS | 35.0% |
| ! | ACAGACTTCTAAGGATCAAA+GGG | + | chr4_1:5914150-5914169 | Msa0531810:CDS | 35.0% |
| ! | TTCTAAGGATCAAAGGGAAT+TGG | + | chr4_1:5914156-5914175 | Msa0531810:CDS | 35.0% |
| GAATTATACTCAGAGTTTGG+AGG | + | chr4_1:5914240-5914259 | Msa0531810:CDS | 35.0% | |
| TCGCATTGTGATCATTGATA+TGG | + | chr4_1:5914466-5914485 | Msa0531810:intron | 35.0% | |
| ! | GTGAAAAGTGCAGTCAAATT+TGG | + | chr4_1:5914488-5914507 | Msa0531810:intron | 35.0% |
| AGTCTTTAGTGAGAGATAGT+TGG | + | chr4_1:5914754-5914773 | Msa0531810:intron | 35.0% | |
| ! | GAAATTCAGTTTTCACAACC+AGG | - | chr4_1:5914853-5914872 | None:intergenic | 35.0% |
| !! | AACATTGTTGACTCTGATAG+AGG | + | chr4_1:5915223-5915242 | Msa0531810:intron | 35.0% |
| !! | ACATTGTTGACTCTGATAGA+GGG | + | chr4_1:5915224-5915243 | Msa0531810:intron | 35.0% |
| TAGCACATGAGGAATTTCTA+GGG | - | chr4_1:5915293-5915312 | None:intergenic | 35.0% | |
| TGTAAGAAAACTAGCACATG+AGG | - | chr4_1:5915304-5915323 | None:intergenic | 35.0% | |
| AACTAAACTGAAACAGAAGC+TGG | + | chr4_1:5915544-5915563 | Msa0531810:intron | 35.0% | |
| ACTAAACTGAAACAGAAGCT+GGG | + | chr4_1:5915545-5915564 | Msa0531810:intron | 35.0% | |
| CAAGAACAAAACAGAAACAG+AGG | + | chr4_1:5915572-5915591 | Msa0531810:intron | 35.0% | |
| TGCTCTGTTTCACTTTCATT+TGG | - | chr4_1:5915637-5915656 | None:intergenic | 35.0% | |
| AAATGAAAGTGAAACAGAGC+AGG | + | chr4_1:5915636-5915655 | Msa0531810:intron | 35.0% | |
| AATGAAAGTGAAACAGAGCA+GGG | + | chr4_1:5915637-5915656 | Msa0531810:intron | 35.0% | |
| AAACCCCAAAAAGACAAACT+TGG | + | chr4_1:5915984-5916003 | Msa0531810:intron | 35.0% | |
| ! | ACACCAAGTTTGTCTTTTTG+GGG | - | chr4_1:5915990-5916009 | None:intergenic | 35.0% |
| ATAACACACAGTTACAGGAT+TGG | - | chr4_1:5916109-5916128 | None:intergenic | 35.0% | |
| ! | ATTGAGTACAAATTGGCTCA+AGG | + | chr4_1:5916133-5916152 | Msa0531810:intron | 35.0% |
| CAATAGTAAATGTGGTCTCA+AGG | + | chr4_1:5916160-5916179 | Msa0531810:intron | 35.0% | |
| TTAGACAAATGTGGTCCAAT+TGG | - | chr4_1:5916237-5916256 | None:intergenic | 35.0% | |
| AATTGGACCACATTTGTCTA+AGG | + | chr4_1:5916236-5916255 | Msa0531810:intron | 35.0% | |
| ATTGGACCACATTTGTCTAA+GGG | + | chr4_1:5916237-5916256 | Msa0531810:intron | 35.0% | |
| ATCTTACCCTTAGACAAATG+TGG | - | chr4_1:5916246-5916265 | None:intergenic | 35.0% | |
| GATGCCTATTCAATTTCCTT+AGG | - | chr4_1:5916392-5916411 | None:intergenic | 35.0% | |
| TGACCTCGTTCTACAAAATT+AGG | - | chr4_1:5916426-5916445 | None:intergenic | 35.0% | |
| TTTCTCAATTCTCAATAGCG+AGG | - | chr4_1:5916513-5916532 | None:intergenic | 35.0% | |
| ! | AAATCGAGCACTTTTGCTTA+CGG | - | chr4_1:5916879-5916898 | None:intergenic | 35.0% |
| ! | AATTCGGTGAAAATGTCTGT+TGG | - | chr4_1:5917527-5917546 | None:intergenic | 35.0% |
| ! | CATTTTCACCGAATTCTTGT+AGG | + | chr4_1:5917532-5917551 | Msa0531810:intron | 35.0% |
| TACAATCATGACAGTGAGTT+TGG | - | chr4_1:5917984-5918003 | None:intergenic | 35.0% | |
| ! | CAAAAGAAACTTGATGATCC+AGG | - | chr4_1:5918152-5918171 | None:intergenic | 35.0% |
| ! | CTGGATCATCAAGTTTCTTT+TGG | + | chr4_1:5918150-5918169 | Msa0531810:intron | 35.0% |
| !! | CTTTTCCCGTTTTGAACTTT+TGG | + | chr4_1:5918190-5918209 | Msa0531810:intron | 35.0% |
| ATTCGGTCCATCGTAATTTA+TGG | + | chr4_1:5918322-5918341 | Msa0531810:intron | 35.0% | |
| CATTACATGAAGCAAATGCT+AGG | - | chr4_1:5918374-5918393 | None:intergenic | 35.0% | |
| TAACAATGTGACGGTTAATG+TGG | - | chr4_1:5918867-5918886 | None:intergenic | 35.0% | |
| TTAACCGTCACATTGTTAAG+TGG | + | chr4_1:5918869-5918888 | Msa0531810:intron | 35.0% | |
| AACTTAACACATCCATCTTG+AGG | - | chr4_1:5918901-5918920 | None:intergenic | 35.0% | |
| ACTCTAGCCTCAAAAAAGAA+CGG | + | chr4_1:5919032-5919051 | Msa0531810:intron | 35.0% | |
| ! | GCTGAATAAATTTAGGACCT+TGG | - | chr4_1:5919108-5919127 | None:intergenic | 35.0% |
| ! | ATTAATCCTATGAGCCTTGT+GGG | - | chr4_1:5919186-5919205 | None:intergenic | 35.0% |
| CCACTAAGCACAGTTAATAA+TGG | - | chr4_1:5919812-5919831 | None:intergenic | 35.0% | |
| CCATTATTAACTGTGCTTAG+TGG | + | chr4_1:5919809-5919828 | Msa0531810:intron | 35.0% | |
| AATGTTAACTAACACGTCGT+GGG | + | chr4_1:5919847-5919866 | Msa0531810:intron | 35.0% | |
| AGGAAGAATGAATTGCAACA+GGG | - | chr4_1:5919925-5919944 | None:intergenic | 35.0% | |
| AAGGAAGAATGAATTGCAAC+AGG | - | chr4_1:5919926-5919945 | None:intergenic | 35.0% | |
| ! | TTGCGAGTTTGGAATGAATT+CGG | - | chr4_1:5919963-5919982 | None:intergenic | 35.0% |
| ! | AAGTTGAGATCGAGTTTTAC+TGG | - | chr4_1:5920024-5920043 | None:intergenic | 35.0% |
| ATGTGAAGGATAATGCTTTC+GGG | - | chr4_1:5920809-5920828 | None:intergenic | 35.0% | |
| CCAAAGATCCTTATATCTTG+TGG | - | chr4_1:5920879-5920898 | None:intergenic | 35.0% | |
| CCACAAGATATAAGGATCTT+TGG | + | chr4_1:5920876-5920895 | Msa0531810:intron | 35.0% | |
| GAAGAATGCAATGTAAGAGT+AGG | - | chr4_1:5920911-5920930 | None:intergenic | 35.0% | |
| ACATTGCATTCTTCAGACTT+TGG | + | chr4_1:5920917-5920936 | Msa0531810:intron | 35.0% | |
| TCACACAATGTCAAACGATT+AGG | + | chr4_1:5921079-5921098 | Msa0531810:intron | 35.0% | |
| TGACATGTAAACACAGTTGA+CGG | - | chr4_1:5921136-5921155 | None:intergenic | 35.0% | |
| ! | GCTGGCAAATTGAAAGATTT+TGG | - | chr4_1:5921220-5921239 | None:intergenic | 35.0% |
| AATTGCAAGTTCGTTAAAGC+TGG | - | chr4_1:5921238-5921257 | None:intergenic | 35.0% | |
| GCTTTAACGAACTTGCAATT+AGG | + | chr4_1:5921238-5921257 | Msa0531810:intron | 35.0% | |
| TCATGTGCAATTGTGTTGTA+AGG | + | chr4_1:5921335-5921354 | Msa0531810:intron | 35.0% | |
| CATGTGCAATTGTGTTGTAA+GGG | + | chr4_1:5921336-5921355 | Msa0531810:intron | 35.0% | |
| ATGTGCAATTGTGTTGTAAG+GGG | + | chr4_1:5921337-5921356 | Msa0531810:intron | 35.0% | |
| CAGCTTAATAGAAACACAAG+AGG | - | chr4_1:5921571-5921590 | None:intergenic | 35.0% | |
| ! | CTCTTGTGTTTCTATTAAGC+TGG | + | chr4_1:5921569-5921588 | Msa0531810:intron | 35.0% |
| AATAGCTTCAAAACATGCCA+AGG | - | chr4_1:5921657-5921676 | None:intergenic | 35.0% | |
| CTAACTAAAGTAGCACACTT+TGG | + | chr4_1:5921752-5921771 | Msa0531810:intron | 35.0% | |
| TGGTTGTATCCTTTCAAGAA+GGG | + | chr4_1:5921780-5921799 | Msa0531810:intron | 35.0% | |
| ! | TTGTTGTTGGTGTATTGAAG+TGG | + | chr4_1:5921913-5921932 | Msa0531810:intron | 35.0% |
| ! | CAATGACTTCAAGTTATGCA+AGG | - | chr4_1:5922124-5922143 | None:intergenic | 35.0% |
| GAAGTCATTGAAAGTGAGAA+TGG | + | chr4_1:5922134-5922153 | Msa0531810:intron | 35.0% | |
| ! | CCTTCTATGTTTCTGATTTC+CGG | + | chr4_1:5922390-5922409 | Msa0531810:intron | 35.0% |
| ! | CTTCTATGTTTCTGATTTCC+GGG | + | chr4_1:5922391-5922410 | Msa0531810:intron | 35.0% |
| GTATCTTGTCTCAACTTAAG+TGG | + | chr4_1:5922500-5922519 | Msa0531810:intron | 35.0% | |
| TAAGTGGATGTTCTATTGCA+AGG | + | chr4_1:5922516-5922535 | Msa0531810:intron | 35.0% | |
| AGGAACATTGTGATAGAAAC+TGG | + | chr4_1:5922724-5922743 | Msa0531810:intron | 35.0% | |
| TTCCAAGAAAATCGAGTCTT+TGG | + | chr4_1:5922784-5922803 | Msa0531810:intron | 35.0% | |
| ! | ATCCAAAGACTCGATTTTCT+TGG | - | chr4_1:5922789-5922808 | None:intergenic | 35.0% |
| GATAGTCACAGAGAAGTTAA+AGG | + | chr4_1:5922853-5922872 | Msa0531810:intron | 35.0% | |
| !!! | ATGGCGATTTTTTGTAACGG+GGG | - | chr4_1:5913446-5913465 | None:intergenic | 40.0% |
| !!! | GATGGCGATTTTTTGTAACG+GGG | - | chr4_1:5913447-5913466 | None:intergenic | 40.0% |
| TGAATTGGGATTAGGGTTGA+TGG | - | chr4_1:5913816-5913835 | None:intergenic | 40.0% | |
| GAGGGATTTGAATTGGGATT+AGG | - | chr4_1:5913824-5913843 | None:intergenic | 40.0% | |
| GAAGGTGAAGATGATGAAGA+GGG | - | chr4_1:5913842-5913861 | None:intergenic | 40.0% | |
| AGAAGGTGAAGATGATGAAG+AGG | - | chr4_1:5913843-5913862 | None:intergenic | 40.0% | |
| ! | TGAAACCGGGTTGAATGATT+GGG | - | chr4_1:5913987-5914006 | None:intergenic | 40.0% |
| ! | TTGAAACCGGGTTGAATGAT+TGG | - | chr4_1:5913988-5914007 | None:intergenic | 40.0% |
| TATCCCTAATTCTCCGTTTC+CGG | + | chr4_1:5914057-5914076 | Msa0531810:CDS | 40.0% | |
| CTTAACTGACAATCAAGCAC+CGG | - | chr4_1:5914079-5914098 | None:intergenic | 40.0% | |
| TTATCGTCGTCCTGAATCAT+CGG | - | chr4_1:5914109-5914128 | None:intergenic | 40.0% | |
| GAATTGGATGTTTGTGCTGA+AGG | + | chr4_1:5914172-5914191 | Msa0531810:CDS | 40.0% | |
| TGTTTGTGCTGAAGGATATG+AGG | + | chr4_1:5914180-5914199 | Msa0531810:CDS | 40.0% | |
| CTGAAGGATATGAGGTTAAG+AGG | + | chr4_1:5914188-5914207 | Msa0531810:CDS | 40.0% | |
| !! | GAGTAATTTGATGGGTTCTG+AGG | + | chr4_1:5914213-5914232 | Msa0531810:CDS | 40.0% |
| TTCAGCTAAGGTTCTTGAAC+AGG | + | chr4_1:5914321-5914340 | Msa0531810:CDS | 40.0% | |
| TAGGGTTTAAATTGTGGCTG+TGG | + | chr4_1:5914431-5914450 | Msa0531810:intron | 40.0% | |
| ATACCATTATGTTGCGGTTG+TGG | + | chr4_1:5914549-5914568 | Msa0531810:intron | 40.0% | |
| TAGTGGTATAAACGTAGGGA+TGG | + | chr4_1:5914622-5914641 | Msa0531810:intron | 40.0% | |
| ! | TTTAGGAATATGGTGGGATG+TGG | + | chr4_1:5914683-5914702 | Msa0531810:intron | 40.0% |
| AAGTATGCTAGGTCTACAAG+TGG | + | chr4_1:5914718-5914737 | Msa0531810:intron | 40.0% | |
| AGTATGCTAGGTCTACAAGT+GGG | + | chr4_1:5914719-5914738 | Msa0531810:intron | 40.0% | |
| !!! | GTCATGTGTTGTTTTAACGG+TGG | + | chr4_1:5914881-5914900 | Msa0531810:intron | 40.0% |
| ACATGATTGACCCTGATTGA+AGG | + | chr4_1:5914929-5914948 | Msa0531810:intron | 40.0% | |
| TATGGAAGTAAGTCTGCAAG+TGG | + | chr4_1:5915101-5915120 | Msa0531810:intron | 40.0% | |
| ATGGAAGTAAGTCTGCAAGT+GGG | + | chr4_1:5915102-5915121 | Msa0531810:intron | 40.0% | |
| AATGTGGACACTTTAGTGAG+AGG | + | chr4_1:5915128-5915147 | Msa0531810:intron | 40.0% | |
| ACACTTTAGTGAGAGGTAGT+TGG | + | chr4_1:5915135-5915154 | Msa0531810:intron | 40.0% | |
| CTAGCACATGAGGAATTTCT+AGG | - | chr4_1:5915294-5915313 | None:intergenic | 40.0% | |
| ACATTGACATACCAAGGCAA+TGG | - | chr4_1:5915372-5915391 | None:intergenic | 40.0% | |
| GTGCTAACATTGACATACCA+AGG | - | chr4_1:5915378-5915397 | None:intergenic | 40.0% | |
| ATGTCAATGTTAGCACCAGT+TGG | + | chr4_1:5915382-5915401 | Msa0531810:intron | 40.0% | |
| GACGATGGTTGAGAATTAGT+AGG | + | chr4_1:5915448-5915467 | Msa0531810:intron | 40.0% | |
| GTTGACATAGCTGTTGGAAA+TGG | + | chr4_1:5915472-5915491 | Msa0531810:intron | 40.0% | |
| AACAAAACAGAAACAGAGGG+AGG | + | chr4_1:5915576-5915595 | Msa0531810:intron | 40.0% | |
| ACAAAACAGAAACAGAGGGA+GGG | + | chr4_1:5915577-5915596 | Msa0531810:intron | 40.0% | |
| ATCATGGAAGAAACAGAACC+AGG | + | chr4_1:5915608-5915627 | Msa0531810:intron | 40.0% | |
| !! | TTCACTTTCATTTGGTGTCC+TGG | - | chr4_1:5915629-5915648 | None:intergenic | 40.0% |
| AACCCCAAAGATGACAAACT+TGG | + | chr4_1:5916033-5916052 | Msa0531810:intron | 40.0% | |
| ACCCCAAAGATGACAAACTT+GGG | + | chr4_1:5916034-5916053 | Msa0531810:intron | 40.0% | |
| TCAGGATAACACACAGTTAC+AGG | - | chr4_1:5916114-5916133 | None:intergenic | 40.0% | |
| GAGCCAATTTGTACTCAATC+AGG | - | chr4_1:5916132-5916151 | None:intergenic | 40.0% | |
| AGTAAATGTGGTCTCAAGGT+TGG | + | chr4_1:5916164-5916183 | Msa0531810:intron | 40.0% | |
| !!! | TTGGTTCTGTTTTGGCCAAT+TGG | + | chr4_1:5916219-5916238 | Msa0531810:intron | 40.0% |
| !! | AATTAGCCTTGCATTCATGC+TGG | - | chr4_1:5916296-5916315 | None:intergenic | 40.0% |
| TGACTATAGCAGCCCATAAA+CGG | + | chr4_1:5916363-5916382 | Msa0531810:intron | 40.0% | |
| GGAGCCTAAGGAAATTGAAT+AGG | + | chr4_1:5916385-5916404 | Msa0531810:intron | 40.0% | |
| ! | AACCAGTCATGTTGGTTACT+TGG | + | chr4_1:5916816-5916835 | Msa0531810:intron | 40.0% |
| AACCAAGTAACCAACATGAC+TGG | - | chr4_1:5916821-5916840 | None:intergenic | 40.0% | |
| ! | CCGCAAAACTTTTCCTAACA+GGG | - | chr4_1:5916849-5916868 | None:intergenic | 40.0% |
| ! | CCCTGTTAGGAAAAGTTTTG+CGG | + | chr4_1:5916846-5916865 | Msa0531810:intron | 40.0% |
| GATACACCTCTTGAACTTGA+AGG | + | chr4_1:5916974-5916993 | Msa0531810:intron | 40.0% | |
| ACCTCTTGAACTTGAAGGAA+AGG | + | chr4_1:5916979-5916998 | Msa0531810:intron | 40.0% | |
| ! | ACCTTTCCTTCAAGTTCAAG+AGG | - | chr4_1:5916983-5917002 | None:intergenic | 40.0% |
| TCCTAGCTGTATGTAACCTT+TGG | + | chr4_1:5917094-5917113 | Msa0531810:intron | 40.0% | |
| TCCAAAGGTTACATACAGCT+AGG | - | chr4_1:5917098-5917117 | None:intergenic | 40.0% | |
| ACCAATAGTTCACAGTTCAG+TGG | + | chr4_1:5917344-5917363 | Msa0531810:intron | 40.0% | |
| CCAATAGTTCACAGTTCAGT+GGG | + | chr4_1:5917345-5917364 | Msa0531810:intron | 40.0% | |
| TGGGTCAACCATGATTAAAC+CGG | + | chr4_1:5917364-5917383 | Msa0531810:intron | 40.0% | |
| !! | CATTACCACCGGTTTAATCA+TGG | - | chr4_1:5917375-5917394 | None:intergenic | 40.0% |
| CCTAAGACCCTACAAGAATT+CGG | - | chr4_1:5917543-5917562 | None:intergenic | 40.0% | |
| CTCACCCAAAAGTTCAAAAC+GGG | - | chr4_1:5918198-5918217 | None:intergenic | 40.0% | |
| GCTCACCCAAAAGTTCAAAA+CGG | - | chr4_1:5918199-5918218 | None:intergenic | 40.0% | |
| GGGTGAGCTTGTAGTATATA+TGG | + | chr4_1:5918211-5918230 | Msa0531810:intron | 40.0% | |
| GGTCCATCGTAATTTATGGA+AGG | + | chr4_1:5918326-5918345 | Msa0531810:intron | 40.0% | |
| GGACCTTCCATAAATTACGA+TGG | - | chr4_1:5918332-5918351 | None:intergenic | 40.0% | |
| ACATGAAGCAAATGCTAGGA+CGG | - | chr4_1:5918370-5918389 | None:intergenic | 40.0% | |
| ! | TGCTTCCTCCGATCAATTTT+AGG | - | chr4_1:5918588-5918607 | None:intergenic | 40.0% |
| ! | ATGTGTACCGATCTAACTTC+CGG | + | chr4_1:5918820-5918839 | Msa0531810:intron | 40.0% |
| TAACACATCCATCTTGAGGT+GGG | - | chr4_1:5918897-5918916 | None:intergenic | 40.0% | |
| TTAACACATCCATCTTGAGG+TGG | - | chr4_1:5918898-5918917 | None:intergenic | 40.0% | |
| AATGGGATTTGTGGTACTTC+CGG | + | chr4_1:5918928-5918947 | Msa0531810:intron | 40.0% | |
| TCCGGTGATATTTGTTCTAG+CGG | + | chr4_1:5918946-5918965 | Msa0531810:intron | 40.0% | |
| ACCGCTAGAACAAATATCAC+CGG | - | chr4_1:5918950-5918969 | None:intergenic | 40.0% | |
| GATTAATCCTATGAGCCTTG+TGG | - | chr4_1:5919187-5919206 | None:intergenic | 40.0% | |
| GCTTAGTGGAGTAGATAAGA+TGG | + | chr4_1:5919823-5919842 | Msa0531810:intron | 40.0% | |
| CAATGTTAACTAACACGTCG+TGG | + | chr4_1:5919846-5919865 | Msa0531810:intron | 40.0% | |
| GAATTCATTCCAAACTCGCA+AGG | + | chr4_1:5919962-5919981 | Msa0531810:intron | 40.0% | |
| ! | TGGATGATTTTGCAGAAGCT+AGG | + | chr4_1:5920163-5920182 | Msa0531810:intron | 40.0% |
| !! | CGATAAGGGTGTGTTTGTTT+TGG | - | chr4_1:5920512-5920531 | None:intergenic | 40.0% |
| GGTTAACCTATTGGAATGTC+TGG | + | chr4_1:5920698-5920717 | Msa0531810:intron | 40.0% | |
| CGGAATCATTATCTCACAAG+CGG | - | chr4_1:5920726-5920745 | None:intergenic | 40.0% | |
| !! | TCGCTGAGCTTTATTCTCTT+CGG | - | chr4_1:5920755-5920774 | None:intergenic | 40.0% |
| ATTCTTAAACACCAACCACG+CGG | + | chr4_1:5920835-5920854 | Msa0531810:intron | 40.0% | |
| AAGAGCTTGTAGTGTGATAG+AGG | - | chr4_1:5920996-5921015 | None:intergenic | 40.0% | |
| CGATTAGGACTCCATTTCAA+TGG | + | chr4_1:5921094-5921113 | Msa0531810:intron | 40.0% | |
| GTCAACTGTGTTTACATGTC+AGG | + | chr4_1:5921135-5921154 | Msa0531810:intron | 40.0% | |
| ! | TAGACTCAGATAAGGAGTAC+CGG | - | chr4_1:5921479-5921498 | None:intergenic | 40.0% |
| ACTCCTTATCTGAGTCTATC+TGG | + | chr4_1:5921481-5921500 | Msa0531810:intron | 40.0% | |
| CTCCTTATCTGAGTCTATCT+GGG | + | chr4_1:5921482-5921501 | Msa0531810:intron | 40.0% | |
| AGAAGTAGAGTCGAGTGAAA+GGG | + | chr4_1:5921543-5921562 | Msa0531810:intron | 40.0% | |
| ! | TGTGTTTCTATTAAGCTGGC+TGG | + | chr4_1:5921573-5921592 | Msa0531810:intron | 40.0% |
| AGTCACTACAACTACTCTTC+AGG | + | chr4_1:5921624-5921643 | Msa0531810:intron | 40.0% | |
| CTTCAAAACATGCCAAGGTA+AGG | - | chr4_1:5921652-5921671 | None:intergenic | 40.0% | |
| GTGGTTGTATCCTTTCAAGA+AGG | + | chr4_1:5921779-5921798 | Msa0531810:intron | 40.0% | |
| ACTAAATGGAGTAGGCTACA+TGG | - | chr4_1:5921879-5921898 | None:intergenic | 40.0% | |
| ATGTAGCCTACTCCATTTAG+TGG | + | chr4_1:5921878-5921897 | Msa0531810:intron | 40.0% | |
| TGTAGCCTACTCCATTTAGT+GGG | + | chr4_1:5921879-5921898 | Msa0531810:intron | 40.0% | |
| CTTATCCCACTAAATGGAGT+AGG | - | chr4_1:5921887-5921906 | None:intergenic | 40.0% | |
| CTACTCCATTTAGTGGGATA+AGG | + | chr4_1:5921885-5921904 | Msa0531810:intron | 40.0% | |
| AAGACATAAGGAGAGAACCT+AGG | - | chr4_1:5922076-5922095 | None:intergenic | 40.0% | |
| ! | GACTTCAAGTTATGCAAGGA+AGG | - | chr4_1:5922120-5922139 | None:intergenic | 40.0% |
| AGCAGCTTCTTTCTTTGACT+TGG | - | chr4_1:5922214-5922233 | None:intergenic | 40.0% | |
| AGTCAAAGAAAGAAGCTGCT+AGG | + | chr4_1:5922214-5922233 | Msa0531810:intron | 40.0% | |
| ATGTAGTCAACTTCTGCCAA+GGG | - | chr4_1:5922321-5922340 | None:intergenic | 40.0% | |
| TATGTAGTCAACTTCTGCCA+AGG | - | chr4_1:5922322-5922341 | None:intergenic | 40.0% | |
| CCGGAAATCAGAAACATAGA+AGG | - | chr4_1:5922393-5922412 | None:intergenic | 40.0% | |
| ! | TGAATTAGTATTTAGCGGGC+AGG | + | chr4_1:5922704-5922723 | Msa0531810:intron | 40.0% |
| ! | TTTTCTCGAACATTCGGGAA+GGG | - | chr4_1:5922816-5922835 | None:intergenic | 40.0% |
| !!! | ATTTTTTGTAACGGGGGTGG+TGG | - | chr4_1:5913440-5913459 | None:intergenic | 45.0% |
| ATTGAGAATTCACGGAGGGA+AGG | - | chr4_1:5913755-5913774 | None:intergenic | 45.0% | |
| GGTGATTGAGAATTCACGGA+GGG | - | chr4_1:5913759-5913778 | None:intergenic | 45.0% | |
| AGGTGATTGAGAATTCACGG+AGG | - | chr4_1:5913760-5913779 | None:intergenic | 45.0% | |
| !! | GTTGATGGTGGAGGAGAATT+GGG | - | chr4_1:5913801-5913820 | None:intergenic | 45.0% |
| !! | ATTGGGATTAGGGTTGATGG+TGG | - | chr4_1:5913813-5913832 | None:intergenic | 45.0% |
| ! | CGGGTTGAATGATTGGGATT+CGG | - | chr4_1:5913981-5914000 | None:intergenic | 45.0% |
| CGAATCCCAATCATTCAACC+CGG | + | chr4_1:5913979-5913998 | Msa0531810:CDS | 45.0% | |
| !! | TGACAATCAAGCACCGGAAA+CGG | - | chr4_1:5914073-5914092 | None:intergenic | 45.0% |
| GGTTGAACAGAGTTCAGCTA+AGG | + | chr4_1:5914309-5914328 | Msa0531810:CDS | 45.0% | |
| GCAGTCAAATTTGGCTGATG+TGG | + | chr4_1:5914497-5914516 | Msa0531810:intron | 45.0% | |
| !! | TGGACTAGTGGAAGTATGCT+AGG | + | chr4_1:5914707-5914726 | Msa0531810:intron | 45.0% |
| GTATGCTAGGTCTACAAGTG+GGG | + | chr4_1:5914720-5914739 | Msa0531810:intron | 45.0% | |
| GTCTACAAGTGGGGAGAATA+TGG | + | chr4_1:5914729-5914748 | Msa0531810:intron | 45.0% | |
| GGAGAGATTCTATCCCTTCT+GGG | + | chr4_1:5914805-5914824 | Msa0531810:intron | 45.0% | |
| GAGAGATTCTATCCCTTCTG+GGG | + | chr4_1:5914806-5914825 | Msa0531810:intron | 45.0% | |
| !! | CTAAAAGAGTGTCCCCAGAA+GGG | - | chr4_1:5914821-5914840 | None:intergenic | 45.0% |
| !! | ACTAAAAGAGTGTCCCCAGA+AGG | - | chr4_1:5914822-5914841 | None:intergenic | 45.0% |
| GTGGTACAAGCATGCTTTGT+CGG | + | chr4_1:5914900-5914919 | Msa0531810:intron | 45.0% | |
| ATGGTGAAGCGTGATGTTGT+TGG | + | chr4_1:5915076-5915095 | Msa0531810:intron | 45.0% | |
| AGCGTGATGTTGTTGGACTA+TGG | + | chr4_1:5915083-5915102 | Msa0531810:intron | 45.0% | |
| TGGAAGTAAGTCTGCAAGTG+GGG | + | chr4_1:5915103-5915122 | Msa0531810:intron | 45.0% | |
| AGGGCCGAAAGACATCAAAA+AGG | - | chr4_1:5915274-5915293 | None:intergenic | 45.0% | |
| !!! | GTCGTGCTTTTGAAACCAAC+TGG | - | chr4_1:5915400-5915419 | None:intergenic | 45.0% |
| TCTCAACCATCGTCAACTAG+TGG | - | chr4_1:5915442-5915461 | None:intergenic | 45.0% | |
| GTAGGAGTTGACATAGCTGT+TGG | + | chr4_1:5915466-5915485 | Msa0531810:intron | 45.0% | |
| AACTGAAACAGAAGCTGGGT+AGG | + | chr4_1:5915549-5915568 | Msa0531810:intron | 45.0% | |
| ! | CATTGTTCACAGCTCTGGTT+TGG | - | chr4_1:5915665-5915684 | None:intergenic | 45.0% |
| GATAGAGTGGAGCCTTGAAA+TGG | + | chr4_1:5915724-5915743 | Msa0531810:intron | 45.0% | |
| AAATAGCACCGCTATTGCGA+TGG | - | chr4_1:5915941-5915960 | None:intergenic | 45.0% | |
| CCCCAAGTTTGTCATCTTTG+GGG | - | chr4_1:5916038-5916057 | None:intergenic | 45.0% | |
| CCCCAAAGATGACAAACTTG+GGG | + | chr4_1:5916035-5916054 | Msa0531810:intron | 45.0% | |
| CCCCCAAGTTTGTCATCTTT+GGG | - | chr4_1:5916039-5916058 | None:intergenic | 45.0% | |
| CCCAAAGATGACAAACTTGG+GGG | + | chr4_1:5916036-5916055 | Msa0531810:intron | 45.0% | |
| TCCCCCAAGTTTGTCATCTT+TGG | - | chr4_1:5916040-5916059 | None:intergenic | 45.0% | |
| AACTTGGGGGACTAGAATCA+TGG | + | chr4_1:5916049-5916068 | Msa0531810:intron | 45.0% | |
| ACACACAGTTACAGGATTGG+AGG | - | chr4_1:5916106-5916125 | None:intergenic | 45.0% | |
| !!! | CTGGAGACTTGGTTCTGTTT+TGG | + | chr4_1:5916211-5916230 | Msa0531810:intron | 45.0% |
| GACTATAGCAGCCCATAAAC+GGG | + | chr4_1:5916364-5916383 | Msa0531810:intron | 45.0% | |
| TTCCTTAGGCTCCCGTTTAT+GGG | - | chr4_1:5916378-5916397 | None:intergenic | 45.0% | |
| TTTCCTTAGGCTCCCGTTTA+TGG | - | chr4_1:5916379-5916398 | None:intergenic | 45.0% | |
| ACTTGGTTCATCACCCTGTT+AGG | + | chr4_1:5916833-5916852 | Msa0531810:intron | 45.0% | |
| ! | GCCGCAAAACTTTTCCTAAC+AGG | - | chr4_1:5916850-5916869 | None:intergenic | 45.0% |
| CCCACTGAACTGTGAACTAT+TGG | - | chr4_1:5917348-5917367 | None:intergenic | 45.0% | |
| GTCAACCATGATTAAACCGG+TGG | + | chr4_1:5917367-5917386 | Msa0531810:intron | 45.0% | |
| CCGAATTCTTGTAGGGTCTT+AGG | + | chr4_1:5917540-5917559 | Msa0531810:intron | 45.0% | |
| GCGAGAACAGATTTATTCGC+AGG | - | chr4_1:5917926-5917945 | None:intergenic | 45.0% | |
| ! | GAAACTTGATGATCCAGGTC+AGG | - | chr4_1:5918147-5918166 | None:intergenic | 45.0% |
| ! | TCGATTTGACTGTGTAGCGT+GGG | + | chr4_1:5918293-5918312 | Msa0531810:intron | 45.0% |
| TGTAGCGTGGGTGAATGATT+CGG | + | chr4_1:5918305-5918324 | Msa0531810:intron | 45.0% | |
| ATGAAGCAAATGCTAGGACG+GGG | - | chr4_1:5918368-5918387 | None:intergenic | 45.0% | |
| CATGAAGCAAATGCTAGGAC+GGG | - | chr4_1:5918369-5918388 | None:intergenic | 45.0% | |
| CCATTGTCTCGTCAAGAGTA+TGG | - | chr4_1:5918766-5918785 | None:intergenic | 45.0% | |
| CCATACTCTTGACGAGACAA+TGG | + | chr4_1:5918763-5918782 | Msa0531810:intron | 45.0% | |
| GGGTCCACTTAACAATGTGA+CGG | - | chr4_1:5918876-5918895 | None:intergenic | 45.0% | |
| AACACATCCATCTTGAGGTG+GGG | - | chr4_1:5918896-5918915 | None:intergenic | 45.0% | |
| GAGGCTAGAGTACGTAGTTA+AGG | - | chr4_1:5919023-5919042 | None:intergenic | 45.0% | |
| !!! | GGTCTCTCCGTTCTTTTTTG+AGG | - | chr4_1:5919042-5919061 | None:intergenic | 45.0% |
| TAACTAACACGTCGTGGGAT+AGG | + | chr4_1:5919852-5919871 | Msa0531810:intron | 45.0% | |
| AATGAATTCGGAACGCTGCT+GGG | - | chr4_1:5919951-5919970 | None:intergenic | 45.0% | |
| GAACACATACCTTGCGAGTT+TGG | - | chr4_1:5919974-5919993 | None:intergenic | 45.0% | |
| TTTATTCTCTTCGGCGACAG+CGG | - | chr4_1:5920746-5920765 | None:intergenic | 45.0% | |
| GAGCAATGTCGCCATTGAAA+TGG | - | chr4_1:5921108-5921127 | None:intergenic | 45.0% | |
| TGCAATTGTGTTGTAAGGGG+TGG | + | chr4_1:5921340-5921359 | Msa0531810:intron | 45.0% | |
| CTCCCAGATAGACTCAGATA+AGG | - | chr4_1:5921487-5921506 | None:intergenic | 45.0% | |
| CAGAAGTAGAGTCGAGTGAA+AGG | + | chr4_1:5921542-5921561 | Msa0531810:intron | 45.0% | |
| ACTCTTCAGGTACCTTACCT+TGG | + | chr4_1:5921637-5921656 | Msa0531810:intron | 45.0% | |
| AGTAGCACACTTTGGTTGAG+TGG | + | chr4_1:5921760-5921779 | Msa0531810:intron | 45.0% | |
| GGTCATAGTCCCTTCTTGAA+AGG | - | chr4_1:5921792-5921811 | None:intergenic | 45.0% | |
| ! | CCAAGCCTTATCCCACTAAA+TGG | - | chr4_1:5921893-5921912 | None:intergenic | 45.0% |
| CCATTTAGTGGGATAAGGCT+TGG | + | chr4_1:5921890-5921909 | Msa0531810:intron | 45.0% | |
| ! | GGATAAGGCTTGGTTGTTGT+TGG | + | chr4_1:5921900-5921919 | Msa0531810:intron | 45.0% |
| CTACTTTACAACAGTCTCCG+AGG | + | chr4_1:5921945-5921964 | Msa0531810:intron | 45.0% | |
| TGAGAGAGCTCAAATCTCCT+CGG | - | chr4_1:5921965-5921984 | None:intergenic | 45.0% | |
| AAGGAGAGAACCTAGGCAAT+GGG | - | chr4_1:5922069-5922088 | None:intergenic | 45.0% | |
| TAAGGAGAGAACCTAGGCAA+TGG | - | chr4_1:5922070-5922089 | None:intergenic | 45.0% | |
| ATGGATTTCGCATGACACTG+AGG | + | chr4_1:5922169-5922188 | Msa0531810:intron | 45.0% | |
| TGGATTTCGCATGACACTGA+GGG | + | chr4_1:5922170-5922189 | Msa0531810:intron | 45.0% | |
| GGAAGTCCACTATTCCATCA+GGG | - | chr4_1:5922284-5922303 | None:intergenic | 45.0% | |
| AGGAAGTCCACTATTCCATC+AGG | - | chr4_1:5922285-5922304 | None:intergenic | 45.0% | |
| TTTCTGATTTCCGGGTCTAC+TGG | + | chr4_1:5922399-5922418 | Msa0531810:intron | 45.0% | |
| TTCTGATTTCCGGGTCTACT+GGG | + | chr4_1:5922400-5922419 | Msa0531810:intron | 45.0% | |
| TAGTTATGACCCAGTAGACC+CGG | - | chr4_1:5922412-5922431 | None:intergenic | 45.0% | |
| ! | CTTTTCTCGAACATTCGGGA+AGG | - | chr4_1:5922817-5922836 | None:intergenic | 45.0% |
| !! | AATTTAATCAAATATAATAT+TGG | - | chr4_1:5914979-5914998 | None:intergenic | 5.0% |
| !! | TTTAAAAATTAAAATGTAAT+GGG | - | chr4_1:5919378-5919397 | None:intergenic | 5.0% |
| !! | ATTTAAAAATTAAAATGTAA+TGG | - | chr4_1:5919379-5919398 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTCAAAAATA+AGG | - | chr4_1:5920353-5920372 | None:intergenic | 5.0% |
| !! | TTTGAAAAAAAAAAAAATAT+TGG | + | chr4_1:5920357-5920376 | Msa0531810:intron | 5.0% |
| !! | TTGAAAAAAAAAAAAATATT+GGG | + | chr4_1:5920358-5920377 | Msa0531810:intron | 5.0% |
| !!! | TCAATTTTTTTTTATTAAAA+TGG | - | chr4_1:5921714-5921733 | None:intergenic | 5.0% |
| !!! | TTTAATTTTTCATAAAATTT+AGG | - | chr4_1:5922015-5922034 | None:intergenic | 5.0% |
| !!! | ATTAATATTAATTTGTATTT+TGG | - | chr4_1:5922752-5922771 | None:intergenic | 5.0% |
| !!! | GCGATTTTTTGTAACGGGGG+TGG | - | chr4_1:5913443-5913462 | None:intergenic | 50.0% |
| ACCTCCACTTCCACATTCTC+CGG | + | chr4_1:5913509-5913528 | Msa0531810:CDS | 50.0% | |
| AATCGTCGGTGAGGTTGAGT+GGG | - | chr4_1:5913565-5913584 | None:intergenic | 50.0% | |
| AGAGAAAGGAGGAAGTGGTG+AGG | - | chr4_1:5913631-5913650 | None:intergenic | 50.0% | |
| AGGAATGAGGGATGAGACGA+CGG | - | chr4_1:5913685-5913704 | None:intergenic | 50.0% | |
| AGAATTCACGGAGGGAAGGA+CGG | - | chr4_1:5913751-5913770 | None:intergenic | 50.0% | |
| !! | GGTTGATGGTGGAGGAGAAT+TGG | - | chr4_1:5913802-5913821 | None:intergenic | 50.0% |
| AACATTGGACCGGCATTTCG+TGG | + | chr4_1:5914019-5914038 | Msa0531810:CDS | 50.0% | |
| CCGTAATGTCCACGAAATGC+CGG | - | chr4_1:5914031-5914050 | None:intergenic | 50.0% | |
| CCGGCATTTCGTGGACATTA+CGG | + | chr4_1:5914028-5914047 | Msa0531810:CDS | 50.0% | |
| GCACCGGAAACGGAGAATTA+GGG | - | chr4_1:5914063-5914082 | None:intergenic | 50.0% | |
| ! | AGCACCGGAAACGGAGAATT+AGG | - | chr4_1:5914064-5914083 | None:intergenic | 50.0% |
| TTTGGCTGATGTGGCCTCAA+TGG | + | chr4_1:5914506-5914525 | Msa0531810:intron | 50.0% | |
| ! | TGGCGGTCACATTGCAGTTT+TGG | + | chr4_1:5914526-5914545 | Msa0531810:intron | 50.0% |
| GGTCCACAACCGCAACATAA+TGG | - | chr4_1:5914555-5914574 | None:intergenic | 50.0% | |
| ! | GGAATATGGTGGGATGTGGT+TGG | + | chr4_1:5914687-5914706 | Msa0531810:intron | 50.0% |
| GGGAGAGATTCTATCCCTTC+TGG | + | chr4_1:5914804-5914823 | Msa0531810:intron | 50.0% | |
| ! | GGGGACACTCTTTTAGTGAG+AGG | + | chr4_1:5914825-5914844 | Msa0531810:intron | 50.0% |
| ! | CTCTTTTAGTGAGAGGTCCC+TGG | + | chr4_1:5914832-5914851 | Msa0531810:intron | 50.0% |
| ATTGGGAGAGATTCCGTCCT+TGG | + | chr4_1:5915184-5915203 | Msa0531810:intron | 50.0% | |
| !! | TTCCGTCCTTGGTGCTTTGT+CGG | + | chr4_1:5915195-5915214 | Msa0531810:intron | 50.0% |
| ! | TCAAGTCCGACAAAGCACCA+AGG | - | chr4_1:5915204-5915223 | None:intergenic | 50.0% |
| TGACTCTGATAGAGGGATGC+AGG | + | chr4_1:5915231-5915250 | Msa0531810:intron | 50.0% | |
| ACTGAGCCACTAGTTGACGA+TGG | + | chr4_1:5915433-5915452 | Msa0531810:intron | 50.0% | |
| AGGGAGGGAGACTAGAATCA+TGG | + | chr4_1:5915592-5915611 | Msa0531810:intron | 50.0% | |
| AGAGTGGAGCCTTGAAATGG+TGG | + | chr4_1:5915727-5915746 | Msa0531810:intron | 50.0% | |
| GGGATAATTGCGGGGTAGAT+GGG | - | chr4_1:5915874-5915893 | None:intergenic | 50.0% | |
| AGGGATAATTGCGGGGTAGA+TGG | - | chr4_1:5915875-5915894 | None:intergenic | 50.0% | |
| TTCACGGAGGGATAATTGCG+GGG | - | chr4_1:5915882-5915901 | None:intergenic | 50.0% | |
| CTTCACGGAGGGATAATTGC+GGG | - | chr4_1:5915883-5915902 | None:intergenic | 50.0% | |
| CCTTCACGGAGGGATAATTG+CGG | - | chr4_1:5915884-5915903 | None:intergenic | 50.0% | |
| TCAAAACGAGCTTCCTGAGC+TGG | + | chr4_1:5916192-5916211 | Msa0531810:intron | 50.0% | |
| AGCCTTGCATTCATGCTGGA+GGG | - | chr4_1:5916292-5916311 | None:intergenic | 50.0% | |
| ! | TAGCCTTGCATTCATGCTGG+AGG | - | chr4_1:5916293-5916312 | None:intergenic | 50.0% |
| ! | ACTAGCTTAGCAAAGCCAGC+AGG | + | chr4_1:5916464-5916483 | Msa0531810:intron | 50.0% |
| CTAGCTTAGCAAAGCCAGCA+GGG | + | chr4_1:5916465-5916484 | Msa0531810:intron | 50.0% | |
| TTCAGGGAGGAACTTACTCG+AGG | + | chr4_1:5917666-5917685 | Msa0531810:intron | 50.0% | |
| ! | CTCGATTTGACTGTGTAGCG+TGG | + | chr4_1:5918292-5918311 | Msa0531810:intron | 50.0% |
| GGACGGGGAGAAAAAACATC+AGG | - | chr4_1:5918353-5918372 | None:intergenic | 50.0% | |
| !! | GGGAGAGTTTGCTGCCTATT+TGG | + | chr4_1:5919158-5919177 | Msa0531810:intron | 50.0% |
| CTGCCTATTTGGATCCCACA+AGG | + | chr4_1:5919169-5919188 | Msa0531810:intron | 50.0% | |
| ! | GAGCCTTGTGGGATCCAAAT+AGG | - | chr4_1:5919175-5919194 | None:intergenic | 50.0% |
| TTGGATCCCACAAGGCTCAT+AGG | + | chr4_1:5919177-5919196 | Msa0531810:intron | 50.0% | |
| ATGAATTCGGAACGCTGCTG+GGG | - | chr4_1:5919950-5919969 | None:intergenic | 50.0% | |
| GAATGAATTCGGAACGCTGC+TGG | - | chr4_1:5919952-5919971 | None:intergenic | 50.0% | |
| GCGGAACCAGACATTCCAAT+AGG | - | chr4_1:5920707-5920726 | None:intergenic | 50.0% | |
| AAACGCAAGTTTGAACCGCG+TGG | - | chr4_1:5920853-5920872 | None:intergenic | 50.0% | |
| TCAAGAAGGGACTATGACCG+TGG | + | chr4_1:5921793-5921812 | Msa0531810:intron | 50.0% | |
| CAAGAAGGGACTATGACCGT+GGG | + | chr4_1:5921794-5921813 | Msa0531810:intron | 50.0% | |
| ACACCTCAGAGTTGAACCCA+CGG | - | chr4_1:5921813-5921832 | None:intergenic | 50.0% | |
| AGGAGAGAACCTAGGCAATG+GGG | - | chr4_1:5922068-5922087 | None:intergenic | 50.0% | |
| TCCACTATTCCATCAGGGAC+GGG | - | chr4_1:5922279-5922298 | None:intergenic | 50.0% | |
| GTCCACTATTCCATCAGGGA+CGG | - | chr4_1:5922280-5922299 | None:intergenic | 50.0% | |
| !! | CCAAGGGTGAATTTTGACGC+AGG | - | chr4_1:5922305-5922324 | None:intergenic | 50.0% |
| CCTGCGTCAAAATTCACCCT+TGG | + | chr4_1:5922302-5922321 | Msa0531810:intron | 50.0% | |
| AAGTGGAGGTGGTTGAGAGG+TGG | - | chr4_1:5913499-5913518 | None:intergenic | 55.0% | |
| TGGAAGTGGAGGTGGTTGAG+AGG | - | chr4_1:5913502-5913521 | None:intergenic | 55.0% | |
| GGAGAATGTGGAAGTGGAGG+TGG | - | chr4_1:5913510-5913529 | None:intergenic | 55.0% | |
| ACATTCTCCGGCCTCCTCTT+CGG | + | chr4_1:5913521-5913540 | Msa0531810:CDS | 55.0% | |
| GAGGTTGAGTGGGGTTGTGA+GGG | - | chr4_1:5913555-5913574 | None:intergenic | 55.0% | |
| TGAGGTTGAGTGGGGTTGTG+AGG | - | chr4_1:5913556-5913575 | None:intergenic | 55.0% | |
| ATCGTCGGTGAGGTTGAGTG+GGG | - | chr4_1:5913564-5913583 | None:intergenic | 55.0% | |
| GAATCGTCGGTGAGGTTGAG+TGG | - | chr4_1:5913566-5913585 | None:intergenic | 55.0% | |
| ATGAGGGATGAGACGACGGA+GGG | - | chr4_1:5913681-5913700 | None:intergenic | 55.0% | |
| AATGAGGGATGAGACGACGG+AGG | - | chr4_1:5913682-5913701 | None:intergenic | 55.0% | |
| CAAGGAGGGAGGAGGAATGA+GGG | - | chr4_1:5913697-5913716 | None:intergenic | 55.0% | |
| ATTCCTCCTCCCTCCTTGGT+TGG | + | chr4_1:5913699-5913718 | Msa0531810:CDS | 55.0% | |
| ! | TCCCTCCTTGGTTGGTTCTC+CGG | + | chr4_1:5913707-5913726 | Msa0531810:CDS | 55.0% |
| ACCGGAGAACCAACCAAGGA+GGG | - | chr4_1:5913711-5913730 | None:intergenic | 55.0% | |
| GGAGAGAGAGGAGAGAGATG+AGG | - | chr4_1:5913780-5913799 | None:intergenic | 55.0% | |
| GGAGGAGAATTGGGAGAGAG+AGG | - | chr4_1:5913792-5913811 | None:intergenic | 55.0% | |
| !! | GGGATTAGGGTTGATGGTGG+AGG | - | chr4_1:5913810-5913829 | None:intergenic | 55.0% |
| CTGCAATGTGACCGCCATTG+AGG | - | chr4_1:5914523-5914542 | None:intergenic | 55.0% | |
| ! | GTGGGATGTGGTTGGACTAG+TGG | + | chr4_1:5914695-5914714 | Msa0531810:intron | 55.0% |
| GTCTGCAAGTGGGGAGAATG+TGG | + | chr4_1:5915112-5915131 | Msa0531810:intron | 55.0% | |
| ! | GTCCGACAAAGCACCAAGGA+CGG | - | chr4_1:5915200-5915219 | None:intergenic | 55.0% |
| GGCTGCATTGTTCACAGCTC+TGG | - | chr4_1:5915670-5915689 | None:intergenic | 55.0% | |
| AGCTGTGAACAATGCAGCCG+AGG | + | chr4_1:5915671-5915690 | Msa0531810:intron | 55.0% | |
| GTGAACAATGCAGCCGAGGA+TGG | + | chr4_1:5915675-5915694 | Msa0531810:intron | 55.0% | |
| TTCGCAGCTCTCACCATCCT+CGG | - | chr4_1:5915691-5915710 | None:intergenic | 55.0% | |
| AGGATGGTGAGAGCTGCGAA+AGG | + | chr4_1:5915691-5915710 | Msa0531810:intron | 55.0% | |
| AGGTGCAGCTGAGGATAGAG+TGG | + | chr4_1:5915711-5915730 | Msa0531810:intron | 55.0% | |
| CGCGAGGAACCACCATTTCA+AGG | - | chr4_1:5915739-5915758 | None:intergenic | 55.0% | |
| TTTACAGCTTCTGTCGCGCG+AGG | - | chr4_1:5915755-5915774 | None:intergenic | 55.0% | |
| CCGCAATTATCCCTCCGTGA+AGG | + | chr4_1:5915881-5915900 | Msa0531810:intron | 55.0% | |
| AGCTTCCTGAGCTGGAGACT+TGG | + | chr4_1:5916200-5916219 | Msa0531810:intron | 55.0% | |
| CAGAACCAAGTCTCCAGCTC+AGG | - | chr4_1:5916208-5916227 | None:intergenic | 55.0% | |
| ! | TGCTGGAGGGCTAAGAGTGT+AGG | - | chr4_1:5916279-5916298 | None:intergenic | 55.0% |
| AGCCCTCCAGCATGAATGCA+AGG | + | chr4_1:5916287-5916306 | Msa0531810:intron | 55.0% | |
| AGCCCATAAACGGGAGCCTA+AGG | + | chr4_1:5916373-5916392 | Msa0531810:intron | 55.0% | |
| TGTTCGCAACAAAGCCCTGC+TGG | - | chr4_1:5916482-5916501 | None:intergenic | 55.0% | |
| TCGGAGTTATGTGCCTGACC+TGG | + | chr4_1:5918131-5918150 | Msa0531810:intron | 55.0% | |
| AAGTGGACCCCACCTCAAGA+TGG | + | chr4_1:5918886-5918905 | Msa0531810:intron | 55.0% | |
| GCAAGTTTGAACCGCGTGGT+TGG | - | chr4_1:5920849-5920868 | None:intergenic | 55.0% | |
| TGACCGTGGGTTCAACTCTG+AGG | + | chr4_1:5921807-5921826 | Msa0531810:intron | 55.0% | |
| ACTTGCATCCCCCATTGCCT+AGG | + | chr4_1:5922056-5922075 | Msa0531810:intron | 55.0% | |
| GGAGAGAACCTAGGCAATGG+GGG | - | chr4_1:5922067-5922086 | None:intergenic | 55.0% | |
| ACCCGTCCCTGATGGAATAG+TGG | + | chr4_1:5922275-5922294 | Msa0531810:intron | 55.0% | |
| ! | CTCTCCATTTTCCGCCGCCA+TGG | + | chr4_1:5913412-5913431 | Msa0531810:exon | 60.0% |
| !! | GGTTGAGAGGTGGTGGAGGA+GGG | - | chr4_1:5913489-5913508 | None:intergenic | 60.0% |
| !! | TGGTTGAGAGGTGGTGGAGG+AGG | - | chr4_1:5913490-5913509 | None:intergenic | 60.0% |
| ! | AGGTGGTTGAGAGGTGGTGG+AGG | - | chr4_1:5913493-5913512 | None:intergenic | 60.0% |
| TGGAGGTGGTTGAGAGGTGG+TGG | - | chr4_1:5913496-5913515 | None:intergenic | 60.0% | |
| GCCGGAGAATGTGGAAGTGG+AGG | - | chr4_1:5913513-5913532 | None:intergenic | 60.0% | |
| GAGGCCGGAGAATGTGGAAG+TGG | - | chr4_1:5913516-5913535 | None:intergenic | 60.0% | |
| GAAGAGGAGGCCGGAGAATG+TGG | - | chr4_1:5913522-5913541 | None:intergenic | 60.0% | |
| TGTCGGAGGAATCGTCGGTG+AGG | - | chr4_1:5913574-5913593 | None:intergenic | 60.0% | |
| ! | GGTGGTGTCGGAGGAATCGT+CGG | - | chr4_1:5913579-5913598 | None:intergenic | 60.0% |
| AGTGGTGAGGAAGCCGGTGA+CGG | - | chr4_1:5913618-5913637 | None:intergenic | 60.0% | |
| GGAGGAAGTGGTGAGGAAGC+CGG | - | chr4_1:5913624-5913643 | None:intergenic | 60.0% | |
| GGGGGAGAGAAAGGAGGAAG+TGG | - | chr4_1:5913636-5913655 | None:intergenic | 60.0% | |
| TCCTCCTTTCTCTCCCCCTC+CGG | + | chr4_1:5913638-5913657 | Msa0531810:CDS | 60.0% | |
| !! | TGGCGTTGATATCGCCGGAG+GGG | - | chr4_1:5913655-5913674 | None:intergenic | 60.0% |
| !! | GTGGCGTTGATATCGCCGGA+GGG | - | chr4_1:5913656-5913675 | None:intergenic | 60.0% |
| !! | GGTGGTGGCGTTGATATCGC+CGG | - | chr4_1:5913660-5913679 | None:intergenic | 60.0% |
| CCAAGGAGGGAGGAGGAATG+AGG | - | chr4_1:5913698-5913717 | None:intergenic | 60.0% | |
| CCTCATTCCTCCTCCCTCCT+TGG | + | chr4_1:5913695-5913714 | Msa0531810:CDS | 60.0% | |
| GAACCAACCAAGGAGGGAGG+AGG | - | chr4_1:5913705-5913724 | None:intergenic | 60.0% | |
| GGAGAACCAACCAAGGAGGG+AGG | - | chr4_1:5913708-5913727 | None:intergenic | 60.0% | |
| GACCGGAGAACCAACCAAGG+AGG | - | chr4_1:5913712-5913731 | None:intergenic | 60.0% | |
| TTCACGGAGGGAAGGACGGA+GGG | - | chr4_1:5913747-5913766 | None:intergenic | 60.0% | |
| ATTCACGGAGGGAAGGACGG+AGG | - | chr4_1:5913748-5913767 | None:intergenic | 60.0% | |
| GGCTGATGTGGCCTCAATGG+CGG | + | chr4_1:5914509-5914528 | Msa0531810:intron | 60.0% | |
| ! | AGCTGCGAAAGGTGCAGCTG+AGG | + | chr4_1:5915702-5915721 | Msa0531810:intron | 60.0% |
| GTTGCAGACGCCTTCACGGA+GGG | - | chr4_1:5915894-5915913 | None:intergenic | 60.0% | |
| !! | CTCCGTGAAGGCGTCTGCAA+CGG | + | chr4_1:5915893-5915912 | Msa0531810:intron | 60.0% |
| GCACCGCTATTGCGATGGAG+CGG | - | chr4_1:5915936-5915955 | None:intergenic | 60.0% | |
| TTCGGAACGCTGCTGGGGTA+AGG | - | chr4_1:5919945-5919964 | None:intergenic | 60.0% | |
| CCATCAGGGACGGGTGAAGA+TGG | - | chr4_1:5922270-5922289 | None:intergenic | 60.0% | |
| CCATCTTCACCCGTCCCTGA+TGG | + | chr4_1:5922267-5922286 | Msa0531810:intron | 60.0% | |
| GGCTCCATGGCGGCGGAAAA+TGG | - | chr4_1:5913419-5913438 | None:intergenic | 65.0% | |
| ! | TAACGGGGGTGGTGGCTCCA+TGG | - | chr4_1:5913432-5913451 | None:intergenic | 65.0% |
| GGAGGAGGGAGGAGAGGGTT+GGG | - | chr4_1:5913475-5913494 | None:intergenic | 65.0% | |
| TGGAGGAGGGAGGAGAGGGT+TGG | - | chr4_1:5913476-5913495 | None:intergenic | 65.0% | |
| ! | GTGGTGGAGGAGGGAGGAGA+GGG | - | chr4_1:5913480-5913499 | None:intergenic | 65.0% |
| !! | TGAGAGGTGGTGGAGGAGGG+AGG | - | chr4_1:5913486-5913505 | None:intergenic | 65.0% |
| TGAGGGTGACGTGGCCGAAG+AGG | - | chr4_1:5913538-5913557 | None:intergenic | 65.0% | |
| GTGGGGTTGTGAGGGTGACG+TGG | - | chr4_1:5913547-5913566 | None:intergenic | 65.0% | |
| ATCGCCGGAGGGGGAGAGAA+AGG | - | chr4_1:5913645-5913664 | None:intergenic | 65.0% | |
| !! | GGCGTTGATATCGCCGGAGG+GGG | - | chr4_1:5913654-5913673 | None:intergenic | 65.0% |
| !! | GGTGGCGTTGATATCGCCGG+AGG | - | chr4_1:5913657-5913676 | None:intergenic | 65.0% |
| GATGAGACGACGGAGGGTGG+TGG | - | chr4_1:5913675-5913694 | None:intergenic | 65.0% | |
| AGGGATGAGACGACGGAGGG+TGG | - | chr4_1:5913678-5913697 | None:intergenic | 65.0% | |
| GGCGACCGGAGAACCAACCA+AGG | - | chr4_1:5913715-5913734 | None:intergenic | 65.0% | |
| AAGGACGGAGGGGAGAACGG+CGG | - | chr4_1:5913736-5913755 | None:intergenic | 65.0% | |
| GGGAAGGACGGAGGGGAGAA+CGG | - | chr4_1:5913739-5913758 | None:intergenic | 65.0% | |
| TCACGGAGGGAAGGACGGAG+GGG | - | chr4_1:5913746-5913765 | None:intergenic | 65.0% | |
| CGTTGCAGACGCCTTCACGG+AGG | - | chr4_1:5915895-5915914 | None:intergenic | 65.0% | |
| GGCCGTTGCAGACGCCTTCA+CGG | - | chr4_1:5915898-5915917 | None:intergenic | 65.0% | |
| TTGCGATGGAGCGGCGCAGA+GGG | - | chr4_1:5915927-5915946 | None:intergenic | 65.0% | |
| ATTGCGATGGAGCGGCGCAG+AGG | - | chr4_1:5915928-5915947 | None:intergenic | 65.0% | |
| GCGCCGCTCCATCGCAATAG+CGG | + | chr4_1:5915930-5915949 | Msa0531810:intron | 65.0% | |
| GGAGAGGGTTGGGCCGGAGA+TGG | - | chr4_1:5913465-5913484 | None:intergenic | 70.0% | |
| GAGGGAGGAGAGGGTTGGGC+CGG | - | chr4_1:5913471-5913490 | None:intergenic | 70.0% | |
| !! | GGTGGTGGAGGAGGGAGGAG+AGG | - | chr4_1:5913481-5913500 | None:intergenic | 70.0% |
| GACGTGGCCGAAGAGGAGGC+CGG | - | chr4_1:5913531-5913550 | None:intergenic | 70.0% | |
| GGGTGACGTGGCCGAAGAGG+AGG | - | chr4_1:5913535-5913554 | None:intergenic | 70.0% | |
| GAGGAGGGTGGGGGTGGTGT+CGG | - | chr4_1:5913591-5913610 | None:intergenic | 70.0% | |
| TGACGGTGGCGAGGAGGGTG+GGG | - | chr4_1:5913601-5913620 | None:intergenic | 70.0% | |
| GTGACGGTGGCGAGGAGGGT+GGG | - | chr4_1:5913602-5913621 | None:intergenic | 70.0% | |
| ACCCTCCTCGCCACCGTCAC+CGG | + | chr4_1:5913602-5913621 | Msa0531810:CDS | 70.0% | |
| ! | GGTGAGGAAGCCGGTGACGG+TGG | - | chr4_1:5913615-5913634 | None:intergenic | 70.0% |
| GCCGGAGGGGGAGAGAAAGG+AGG | - | chr4_1:5913642-5913661 | None:intergenic | 70.0% | |
| GAGCGGCGCAGAGGGAGTAG+CGG | - | chr4_1:5915919-5915938 | None:intergenic | 70.0% | |
| ! | GGGTGGTGGCTCCATGGCGG+CGG | - | chr4_1:5913426-5913445 | None:intergenic | 75.0% |
| ! | CGGGGGTGGTGGCTCCATGG+CGG | - | chr4_1:5913429-5913448 | None:intergenic | 75.0% |
| ! | GAGGGTGGGGGTGGTGTCGG+AGG | - | chr4_1:5913588-5913607 | None:intergenic | 75.0% |
| GACGGTGGCGAGGAGGGTGG+GGG | - | chr4_1:5913600-5913619 | None:intergenic | 75.0% | |
| ! | GGTGACGGTGGCGAGGAGGG+TGG | - | chr4_1:5913603-5913622 | None:intergenic | 75.0% |
| ! | GCCGGTGACGGTGGCGAGGA+GGG | - | chr4_1:5913606-5913625 | None:intergenic | 75.0% |
| ! | AGCCGGTGACGGTGGCGAGG+AGG | - | chr4_1:5913607-5913626 | None:intergenic | 75.0% |
| ! | GGAAGCCGGTGACGGTGGCG+AGG | - | chr4_1:5913610-5913629 | None:intergenic | 75.0% |
| GAGGGGAGAACGGCGGCGAC+CGG | - | chr4_1:5913729-5913748 | None:intergenic | 75.0% | |
| ! | GGTGGCGAGGAGGGTGGGGG+TGG | - | chr4_1:5913597-5913616 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 5913324 | 5922990 | 5913324 | ID=Msa0531810;Name=Msa0531810 |
| chr4_1 | mRNA | 5913324 | 5922990 | 5913324 | ID=Msa0531810-mRNA-1;Parent=Msa0531810;Name=Msa0531810-mRNA-1;_AED=0.16;_eAED=0.16;_QI=107|0|0.33|0.33|1|1|3|0|307 |
| chr4_1 | exon | 5913324 | 5914342 | 5913324 | ID=Msa0531810-mRNA-1:exon:1980;Parent=Msa0531810-mRNA-1 |
| chr4_1 | exon | 5916436 | 5916441 | 5916436 | ID=Msa0531810-mRNA-1:exon:1981;Parent=Msa0531810-mRNA-1 |
| chr4_1 | exon | 5922985 | 5922990 | 5922985 | ID=Msa0531810-mRNA-1:exon:1982;Parent=Msa0531810-mRNA-1 |
| chr4_1 | five_prime_UTR | 5913324 | 5913430 | 5913324 | ID=Msa0531810-mRNA-1:five_prime_utr;Parent=Msa0531810-mRNA-1 |
| chr4_1 | CDS | 5913431 | 5914342 | 5913431 | ID=Msa0531810-mRNA-1:cds;Parent=Msa0531810-mRNA-1 |
| chr4_1 | CDS | 5916436 | 5916441 | 5916436 | ID=Msa0531810-mRNA-1:cds;Parent=Msa0531810-mRNA-1 |
| chr4_1 | CDS | 5922985 | 5922990 | 5922985 | ID=Msa0531810-mRNA-1:cds;Parent=Msa0531810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
