AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0532260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0532260 MtrunA17_Chr4g0005601 81.633 147 26 1 50 195 1 147 6.31e-82 241
Msa0532260 MtrunA17_Chr6g0454961 76.582 158 37 0 38 195 567 724 7.51e-80 258
Msa0532260 MtrunA17_Chr4g0005591 75.625 160 39 0 36 195 607 766 1.68e-79 256
Msa0532260 MtrunA17_Chr4g0005871 75.625 160 39 0 36 195 664 823 4.03e-78 253
Msa0532260 MtrunA17_Chr4g0005871 52.459 61 29 0 1 61 283 343 9.71e-11 60.5
Msa0532260 MtrunA17_Chr6g0454831 75.949 158 38 0 38 195 540 697 7.68e-78 251
Msa0532260 MtrunA17_Chr4g0005891 75.625 160 39 0 36 195 579 738 1.33e-77 251
Msa0532260 MtrunA17_Chr4g0005851 74.684 158 40 0 38 195 570 727 2.25e-77 250
Msa0532260 MtrunA17_Chr4g0014831 70.440 159 47 0 37 195 325 483 4.38e-76 240
Msa0532260 MtrunA17_Chr6g0455551 72.956 159 43 0 37 195 615 773 6.73e-76 246
Msa0532260 MtrunA17_Chr7g0257531 75.168 149 37 0 37 185 199 347 2.98e-75 239
Msa0532260 MtrunA17_Chr6g0455221 72.785 158 43 0 38 195 546 703 2.95e-74 242
Msa0532260 MtrunA17_Chr6g0454851 71.698 159 45 0 37 195 632 790 4.60e-74 241
Msa0532260 MtrunA17_Chr6g0454971 72.500 160 44 0 36 195 579 738 6.65e-74 241
Msa0532260 MtrunA17_Chr6g0454821 71.698 159 45 0 37 195 580 738 7.90e-72 235
Msa0532260 MtrunA17_Chr6g0455191 69.375 160 49 0 36 195 847 1006 8.41e-72 236
Msa0532260 MtrunA17_Chr6g0454931 69.427 157 48 0 37 193 607 763 2.45e-71 231
Msa0532260 MtrunA17_Chr6g0454951 70.440 159 47 0 37 195 626 784 2.87e-70 231
Msa0532260 MtrunA17_Chr6g0455131 67.702 161 52 0 35 195 622 782 1.26e-68 226
Msa0532260 MtrunA17_Chr6g0455211 67.296 159 52 0 37 195 584 742 1.33e-68 226
Msa0532260 MtrunA17_Chr6g0455031 68.553 159 48 1 37 195 559 715 2.17e-66 219
Msa0532260 MtrunA17_Chr6g0455251 66.250 160 52 1 36 195 553 710 9.45e-66 218
Msa0532260 MtrunA17_Chr6g0455251 45.912 159 58 3 41 195 693 827 5.92e-31 119
Msa0532260 MtrunA17_Chr4g0009101 66.456 158 53 0 38 195 1076 1233 3.63e-64 214
Msa0532260 MtrunA17_Chr4g0009141 65.823 158 54 0 38 195 1058 1215 7.12e-63 210
Msa0532260 MtrunA17_Chr4g0009141 45.902 61 33 0 1 61 675 735 5.50e-11 61.2
Msa0532260 MtrunA17_Chr7g0255681 53.646 192 82 2 4 195 1523 1707 1.43e-60 204
Msa0532260 MtrunA17_Chr4g0010711 64.474 152 54 0 44 195 1058 1209 2.03e-60 203
Msa0532260 MtrunA17_Chr4g0009241 64.286 154 55 0 42 195 1087 1240 4.76e-60 202
Msa0532260 MtrunA17_Chr4g0009301 62.581 155 58 0 41 195 1079 1233 6.31e-60 202
Msa0532260 MtrunA17_Chr4g0009361 62.581 155 58 0 41 195 51 205 2.44e-59 197
Msa0532260 MtrunA17_Chr4g0009171 62.581 155 58 0 41 195 539 693 1.50e-58 198
Msa0532260 MtrunA17_Chr4g0009171 61.290 155 60 0 41 195 1266 1420 1.09e-56 192
Msa0532260 MtrunA17_Chr4g0009401 65.584 154 53 0 42 195 1041 1194 5.27e-58 196
Msa0532260 MtrunA17_Chr4g0009041 61.935 155 59 0 41 195 1047 1201 4.97e-57 193
Msa0532260 MtrunA17_Chr7g0234901 53.646 192 82 2 4 195 31 215 6.90e-55 183
Msa0532260 MtrunA17_Chr8g0338841 56.604 159 69 0 37 195 5 163 3.38e-52 174
Msa0532260 MtrunA17_Chr2g0296451 59.091 154 63 0 42 195 61 214 4.21e-51 173
Msa0532260 MtrunA17_Chr8g0352211 56.774 155 67 0 41 195 556 710 7.11e-51 176
Msa0532260 MtrunA17_Chr8g0338901 55.195 154 69 0 42 195 566 719 1.49e-50 175
Msa0532260 MtrunA17_Chr8g0339011 55.975 159 70 0 37 195 534 692 3.35e-49 171
Msa0532260 MtrunA17_Chr8g0338981 56.604 159 69 0 37 195 538 696 5.82e-49 170
Msa0532260 MtrunA17_Chr8g0338881 59.355 155 63 0 41 195 573 727 1.81e-48 169
Msa0532260 MtrunA17_Chr8g0339031 57.792 154 65 0 42 195 555 708 9.80e-47 164
Msa0532260 MtrunA17_Chr8g0339021 51.948 154 74 0 42 195 535 688 1.37e-46 163
Msa0532260 MtrunA17_Chr5g0430541 55.195 154 69 0 42 195 69 222 1.41e-46 161
Msa0532260 MtrunA17_Chr8g0370511 51.299 154 75 0 42 195 545 698 1.02e-45 161
Msa0532260 MtrunA17_Chr3g0085731 56.774 155 67 0 42 196 559 713 2.91e-45 160
Msa0532260 MtrunA17_Chr5g0420331 53.247 154 72 0 42 195 546 699 9.32e-44 155
Msa0532260 MtrunA17_Chr5g0414761 56.129 155 68 0 41 195 330 484 2.90e-43 154
Msa0532260 MtrunA17_Chr5g0420341 51.948 154 74 0 42 195 546 699 7.55e-43 153
Msa0532260 MtrunA17_Chr7g0223531 56.129 155 68 0 41 195 554 708 8.22e-41 147
Msa0532260 MtrunA17_Chr3g0085541 55.639 133 59 0 42 174 558 690 9.81e-41 146
Msa0532260 MtrunA17_Chr6g0455181 72.414 87 24 0 109 195 4 90 1.68e-36 130
Msa0532260 MtrunA17_Chr6g0454901 70.930 86 24 1 37 121 351 436 7.58e-35 127
Msa0532260 MtrunA17_Chr8g0352221 46.753 154 58 1 42 195 539 668 4.78e-31 119
Msa0532260 MtrunA17_Chr6g0454871 61.111 90 35 0 106 195 1 90 2.68e-30 112
Msa0532260 MtrunA17_Chr4g0041441 40.940 149 88 0 45 193 543 691 3.47e-29 114
Msa0532260 MtrunA17_Chr3g0114401 54.545 99 45 0 41 139 425 523 1.69e-28 111
Msa0532260 MtrunA17_Chr4g0041431 38.667 150 92 0 44 193 373 522 3.59e-28 110
Msa0532260 MtrunA17_Chr4g0041611 38.000 150 93 0 44 193 560 709 1.05e-27 109
Msa0532260 MtrunA17_Chr4g0042011 36.129 155 99 0 39 193 554 708 3.15e-27 108
Msa0532260 MtrunA17_Chr6g0486311 39.865 148 88 1 50 196 558 705 4.49e-27 107
Msa0532260 MtrunA17_Chr4g0041941 38.667 150 92 0 44 193 547 696 1.53e-25 103
Msa0532260 MtrunA17_Chr7g0248121 40.260 154 91 1 42 195 552 704 3.33e-25 102
Msa0532260 MtrunA17_Chr7g0248521 40.260 154 91 1 42 195 551 703 4.80e-25 102
Msa0532260 MtrunA17_Chr4g0041231 36.129 155 99 0 40 194 552 706 5.97e-25 101
Msa0532260 MtrunA17_Chr2g0319851 38.217 157 92 2 39 191 583 738 6.02e-25 101
Msa0532260 MtrunA17_Chr4g0041241 33.929 168 102 2 27 193 546 705 9.34e-24 98.2
Msa0532260 MtrunA17_Chr4g0041981 33.540 161 106 1 40 199 62 222 1.11e-23 94.7
Msa0532260 MtrunA17_Chr2g0299561 35.429 175 111 1 21 193 528 702 1.24e-23 97.8
Msa0532260 MtrunA17_Chr6g0486301 39.310 145 87 1 50 193 557 701 1.28e-23 97.8
Msa0532260 MtrunA17_Chr4g0009281 66.129 62 21 0 41 102 112 173 2.28e-23 91.7
Msa0532260 MtrunA17_Chr6g0485991 40.411 146 85 1 50 193 559 704 5.27e-23 95.9
Msa0532260 MtrunA17_Chr7g0256881 42.105 152 86 2 45 195 545 695 7.90e-23 95.5
Msa0532260 MtrunA17_Chr8g0348541 41.611 149 83 3 45 190 560 707 2.70e-22 94.0
Msa0532260 MtrunA17_Chr7g0248511 41.558 154 89 1 42 195 558 710 1.13e-21 92.0
Msa0532260 MtrunA17_Chr6g0482111 30.601 183 116 4 7 186 521 695 2.45e-21 91.3
Msa0532260 MtrunA17_Chr6g0486481 37.931 145 89 1 50 193 560 704 5.71e-21 90.1
Msa0532260 MtrunA17_Chr6g0486271 36.552 145 91 1 44 187 550 694 6.89e-21 89.7
Msa0532260 MtrunA17_Chr2g0298531 35.443 158 97 2 42 195 558 714 6.96e-21 89.7
Msa0532260 MtrunA17_Chr6g0486361 35.811 148 94 1 50 196 557 704 1.22e-20 89.4
Msa0532260 MtrunA17_Chr6g0486731 37.931 145 89 1 50 193 560 704 1.75e-20 88.6
Msa0532260 MtrunA17_Chr7g0242801 35.714 154 95 1 42 191 626 779 1.96e-20 88.6
Msa0532260 MtrunA17_Chr6g0486221 39.516 124 75 0 70 193 586 709 2.34e-20 88.6
Msa0532260 MtrunA17_Chr8g0363851 38.509 161 94 3 38 195 383 541 2.85e-20 88.2
Msa0532260 MtrunA17_Chr8g0342131 34.752 141 86 1 46 180 557 697 3.30e-20 87.8
Msa0532260 MtrunA17_Chr4g0041931 37.857 140 82 2 50 184 569 708 5.06e-20 87.4
Msa0532260 MtrunA17_Chr7g0242751 38.095 147 90 1 50 195 589 735 7.14e-20 87.0
Msa0532260 MtrunA17_Chr8g0350081 36.170 141 87 1 43 180 62 202 7.58e-20 86.7
Msa0532260 MtrunA17_Chr4g0041951 34.965 143 93 0 53 195 612 754 9.35e-20 86.7
Msa0532260 MtrunA17_Chr2g0298291 34.810 158 98 2 42 195 553 709 9.74e-20 86.7
Msa0532260 MtrunA17_Chr3g0119601 40.000 150 85 4 45 190 550 698 1.19e-19 86.3
Msa0532260 MtrunA17_Chr3g0118981 33.136 169 96 2 43 195 559 726 9.46e-19 83.6
Msa0532260 MtrunA17_Chr6g0486521 37.405 131 81 1 65 195 584 713 1.29e-18 83.2
Msa0532260 MtrunA17_Chr8g0338821 50.000 74 37 0 41 114 114 187 1.68e-18 79.3
Msa0532260 MtrunA17_Chr8g0353001 34.043 141 87 1 46 180 553 693 1.81e-18 82.8
Msa0532260 MtrunA17_Chr5g0394041 35.938 128 82 0 50 177 168 295 2.54e-18 82.4
Msa0532260 MtrunA17_Chr8g0342911 33.803 142 88 1 45 180 565 706 2.77e-18 82.4
Msa0532260 MtrunA17_Chr4g0018431 33.735 166 97 2 42 195 561 725 3.04e-18 82.4
Msa0532260 MtrunA17_Chr8g0350111 34.459 148 87 1 43 180 62 209 1.77e-17 80.1
Msa0532260 MtrunA17_Chr4g0020591 35.185 162 97 2 42 196 548 708 2.68e-17 79.7
Msa0532260 MtrunA17_Chr7g0242811 36.054 147 93 1 50 195 586 732 3.73e-17 79.0
Msa0532260 MtrunA17_Chr7g0243031 35.156 128 83 0 50 177 71 198 3.80e-17 79.0
Msa0532260 MtrunA17_Chr3g0119591 39.844 128 75 2 45 171 272 398 3.88e-17 78.6
Msa0532260 MtrunA17_Chr2g0319821 33.333 147 92 1 50 190 595 741 4.82e-17 79.0
Msa0532260 MtrunA17_Chr3g0084721 31.088 193 123 5 3 195 523 705 8.29e-17 78.2
Msa0532260 MtrunA17_Chr3g0081531 33.113 151 97 3 46 195 546 693 9.85e-17 77.8
Msa0532260 MtrunA17_Chr8g0351551 32.394 142 90 1 45 180 552 693 1.21e-16 77.8
Msa0532260 MtrunA17_Chr2g0299811 32.895 152 100 2 42 193 397 546 1.54e-16 77.4
Msa0532260 MtrunA17_Chr3g0084841 30.570 193 124 5 3 195 524 706 3.32e-16 76.3
Msa0532260 MtrunA17_Chr8g0372681 34.028 144 89 1 43 180 549 692 3.80e-16 76.3
Msa0532260 MtrunA17_Chr8g0343661 33.735 166 97 2 42 195 258 422 3.81e-16 76.3
Msa0532260 MtrunA17_Chr4g0010521 32.075 159 103 3 42 200 543 696 5.50e-16 75.9
Msa0532260 MtrunA17_Chr2g0319921 33.588 131 87 0 50 180 566 696 5.60e-16 75.9
Msa0532260 MtrunA17_Chr8g0353371 30.556 180 117 4 3 181 533 705 6.98e-16 75.5
Msa0532260 MtrunA17_Chr3g0119001 33.735 166 97 3 42 195 556 720 7.64e-16 75.5
Msa0532260 MtrunA17_Chr8g0343671 35.374 147 87 2 42 180 590 736 9.99e-16 75.1
Msa0532260 MtrunA17_Chr3g0104861 33.784 148 85 3 45 180 542 688 1.02e-15 74.7
Msa0532260 MtrunA17_Chr4g0005341 32.704 159 98 2 43 197 62 215 1.09e-15 74.7
Msa0532260 MtrunA17_Chr8g0354721 31.690 142 96 1 45 186 558 698 1.70e-15 74.3
Msa0532260 MtrunA17_Chr1g0153511 27.778 180 118 3 4 181 476 645 2.23e-15 73.9
Msa0532260 MtrunA17_Chr3g0084731 35.099 151 96 2 45 195 555 703 2.80e-15 73.6
Msa0532260 MtrunA17_Chr8g0350061 31.293 147 91 1 44 180 30 176 2.95e-15 73.2
Msa0532260 MtrunA17_Chr2g0330121 33.540 161 99 2 42 195 369 528 3.31e-15 73.6
Msa0532260 MtrunA17_Chr8g0354711 30.882 136 93 1 46 181 555 689 3.41e-15 73.6
Msa0532260 MtrunA17_Chr4g0005291 33.125 160 99 2 43 195 604 762 3.95e-15 73.2
Msa0532260 MtrunA17_Chr2g0299841 30.405 148 93 2 42 180 591 737 4.16e-15 73.2
Msa0532260 MtrunA17_Chr2g0299921 32.692 156 95 3 42 193 548 697 4.75e-15 73.2
Msa0532260 MtrunA17_Chr8g0354681 30.986 142 97 1 45 186 562 702 4.99e-15 72.8
Msa0532260 MtrunA17_Chr2g0299851 32.692 156 95 3 42 193 549 698 5.85e-15 72.8
Msa0532260 MtrunA17_Chr3g0102261 30.625 160 102 2 44 195 561 719 1.34e-14 71.6
Msa0532260 MtrunA17_Chr8g0354701 30.657 137 94 1 45 181 559 694 1.38e-14 71.6
Msa0532260 MtrunA17_Chr3g0102171 29.375 160 104 2 44 195 559 717 1.75e-14 71.2
Msa0532260 MtrunA17_Chr4g0005391 33.544 158 97 2 43 193 594 750 2.43e-14 70.9
Msa0532260 MtrunA17_Chr3g0102271 30.000 160 103 2 44 195 560 718 3.18e-14 70.5
Msa0532260 MtrunA17_Chr8g0342201 34.234 111 67 1 44 148 588 698 4.02e-14 70.1
Msa0532260 MtrunA17_Chr4g0010651 30.405 148 101 2 46 193 549 694 5.35e-14 70.1
Msa0532260 MtrunA17_Chr6g0481011 33.784 148 94 3 50 195 574 719 6.08e-14 69.7
Msa0532260 MtrunA17_Chr4g0005401 29.412 187 103 2 42 199 559 745 8.42e-14 69.3
Msa0532260 MtrunA17_Chr3g0102121 28.931 159 105 2 44 195 561 718 9.20e-14 69.3
Msa0532260 MtrunA17_Chr8g0371711 31.159 138 93 1 46 181 559 696 1.34e-13 68.9
Msa0532260 MtrunA17_Chr8g0343631 32.653 147 91 1 42 180 567 713 1.45e-13 68.6
Msa0532260 MtrunA17_Chr3g0102281 32.331 133 88 2 63 195 587 717 2.34e-13 68.2
Msa0532260 MtrunA17_Chr2g0299881 31.613 155 96 3 43 193 555 703 2.59e-13 68.2
Msa0532260 MtrunA17_Chr6g0474801 29.444 180 117 3 6 181 525 698 2.60e-13 67.8
Msa0532260 MtrunA17_Chr3g0102131 29.375 160 104 2 44 195 561 719 4.31e-13 67.4
Msa0532260 MtrunA17_Chr7g0248201 47.561 82 42 1 114 195 13 93 4.61e-13 65.5
Msa0532260 MtrunA17_Chr6g0482141 27.072 181 120 3 3 181 554 724 4.66e-13 67.4
Msa0532260 MtrunA17_Chr8g0343611 34.959 123 72 2 42 156 382 504 5.61e-13 66.6
Msa0532260 MtrunA17_Chr8g0342731 42.169 83 48 0 74 156 7 89 5.84e-13 67.0
Msa0532260 MtrunA17_Chr3g0084761 28.000 125 89 1 50 174 1 124 6.02e-13 63.2
Msa0532260 MtrunA17_Chr4g0005101 29.747 158 106 2 42 195 585 741 6.15e-13 67.0
Msa0532260 MtrunA17_Chr5g0439951 29.091 165 82 3 42 195 537 677 1.62e-12 65.5
Msa0532260 MtrunA17_Chr8g0342671 37.383 107 67 0 74 180 583 689 1.77e-12 65.5
Msa0532260 MtrunA17_Chr8g0342621 35.772 123 70 1 43 156 544 666 2.06e-12 65.5
Msa0532260 MtrunA17_Chr8g0342691 31.944 144 89 1 46 180 542 685 4.31e-12 64.3
Msa0532260 MtrunA17_Chr6g0455171 69.231 39 12 0 37 75 95 133 4.67e-12 60.8
Msa0532260 MtrunA17_Chr3g0084851 29.801 151 104 2 45 195 557 705 5.69e-12 63.9
Msa0532260 MtrunA17_Chr3g0084151 28.977 176 109 4 18 193 526 685 6.97e-12 63.9
Msa0532260 MtrunA17_Chr4g0005731 35.772 123 69 3 43 156 543 664 1.28e-11 62.8
Msa0532260 MtrunA17_Chr6g0480911 27.374 179 122 3 7 181 529 703 1.63e-11 62.8
Msa0532260 MtrunA17_Chr1g0172811 31.034 145 91 1 42 177 546 690 2.10e-11 62.4
Msa0532260 MtrunA17_Chr4g0006771 27.737 137 79 1 45 181 563 679 2.99e-11 62.0
Msa0532260 MtrunA17_Chr8g0338811 59.184 49 20 0 147 195 1 49 4.14e-11 58.2
Msa0532260 MtrunA17_Chr6g0480981 29.577 142 98 1 47 186 298 439 7.90e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0532260 AT5G36930.4 44.304 158 84 2 42 195 542 699 1.92e-33 126
Msa0532260 AT5G36930.1 44.304 158 84 2 42 195 542 699 1.92e-33 126
Msa0532260 AT5G36930.3 44.304 158 84 2 42 195 542 699 2.17e-33 126
Msa0532260 AT5G36930.2 44.304 158 84 2 42 195 545 702 2.47e-33 126
Msa0532260 AT1G27180.3 39.355 155 90 2 44 195 606 759 9.49e-25 101
Msa0532260 AT1G27180.1 39.355 155 90 2 44 195 768 921 1.11e-24 101
Msa0532260 AT1G27180.2 39.355 155 90 2 44 195 606 759 1.26e-24 101
Msa0532260 AT1G27180.5 39.355 155 90 2 44 195 604 757 1.32e-24 101
Msa0532260 AT1G27180.8 39.355 155 90 2 44 195 604 757 1.32e-24 101
Msa0532260 AT1G27180.7 39.355 155 90 2 44 195 430 583 1.63e-24 100
Msa0532260 AT1G27180.6 39.355 155 90 2 44 195 430 583 1.63e-24 100
Msa0532260 AT1G27180.4 39.355 155 90 2 44 195 430 583 1.63e-24 100
Msa0532260 AT5G17680.1 37.736 159 90 2 43 193 543 700 3.80e-24 99.8
Msa0532260 AT5G17680.2 37.736 159 90 2 43 193 544 701 3.95e-24 99.8
Msa0532260 AT3G25505.1 36.478 159 96 1 42 195 368 526 3.04e-22 94.0
Msa0532260 AT4G12010.1 33.010 206 117 4 2 195 524 720 5.73e-22 93.6
Msa0532260 AT1G27170.1 32.934 167 110 1 31 195 582 748 3.14e-21 91.3
Msa0532260 AT1G27170.2 32.934 167 110 1 31 195 582 748 3.30e-21 91.3
Msa0532260 AT1G63880.2 37.267 161 87 3 45 195 550 706 1.22e-20 89.4
Msa0532260 AT1G63880.1 37.267 161 87 3 45 195 550 706 1.36e-20 89.4
Msa0532260 AT1G31540.3 38.365 159 90 3 45 196 549 706 2.20e-20 89.0
Msa0532260 AT1G31540.1 38.365 159 90 3 45 196 549 706 2.20e-20 89.0
Msa0532260 AT1G31540.2 38.365 159 90 3 45 196 549 706 2.47e-20 88.6
Msa0532260 AT5G38350.1 36.420 162 94 2 42 195 395 555 2.50e-20 88.6
Msa0532260 AT1G56510.1 36.025 161 92 4 42 193 541 699 3.65e-20 88.2
Msa0532260 AT2G14080.1 36.875 160 93 1 42 193 591 750 9.05e-20 87.0
Msa0532260 AT2G14080.2 36.875 160 93 1 42 193 458 617 1.06e-19 87.0
Msa0532260 AT2G16870.3 36.420 162 93 3 42 195 267 426 1.55e-19 86.3
Msa0532260 AT2G16870.2 36.420 162 93 3 42 195 267 426 1.55e-19 86.3
Msa0532260 AT2G16870.1 36.420 162 93 3 42 195 541 700 1.89e-19 86.3
Msa0532260 AT5G46260.1 35.443 158 93 2 41 190 544 700 2.18e-19 85.9
Msa0532260 AT5G40060.1 34.161 161 95 3 45 195 358 517 2.99e-19 85.5
Msa0532260 AT5G40060.2 34.161 161 95 3 45 195 358 517 3.20e-19 85.5
Msa0532260 AT5G41740.3 36.076 158 92 4 43 193 380 535 4.28e-19 85.1
Msa0532260 AT5G38340.3 33.962 159 100 1 42 195 599 757 4.66e-19 85.1
Msa0532260 AT5G38340.1 33.962 159 100 1 42 195 599 757 4.66e-19 85.1
Msa0532260 AT5G38340.2 33.962 159 100 1 42 195 393 551 4.90e-19 85.1
Msa0532260 AT5G41740.2 36.076 158 92 4 43 193 532 687 5.57e-19 84.7
Msa0532260 AT5G41740.1 36.076 158 92 4 43 193 532 687 6.08e-19 84.7
Msa0532260 AT3G04220.3 31.844 179 97 2 42 195 597 775 9.67e-19 84.0
Msa0532260 AT1G63870.1 33.962 159 97 2 42 193 542 699 1.82e-18 83.2
Msa0532260 AT5G44510.2 32.500 200 123 3 5 195 539 735 2.80e-18 82.8
Msa0532260 AT5G44510.4 32.500 200 123 3 5 195 539 735 2.85e-18 82.8
Msa0532260 AT5G44510.1 32.500 200 123 3 5 195 539 735 2.89e-18 82.8
Msa0532260 AT5G44510.3 32.500 200 123 3 5 195 539 735 3.08e-18 82.8
Msa0532260 AT4G12020.4 38.854 157 87 2 47 195 1172 1327 6.43e-18 81.6
Msa0532260 AT4G12020.7 38.854 157 87 2 47 195 1172 1327 6.53e-18 81.6
Msa0532260 AT4G12020.10 38.854 157 87 2 47 195 1172 1327 6.74e-18 81.6
Msa0532260 AT1G63860.2 34.247 146 89 1 46 184 517 662 7.05e-18 81.6
Msa0532260 AT4G12020.6 38.854 157 87 2 47 195 1172 1327 7.18e-18 81.6
Msa0532260 AT4G12020.8 38.854 157 87 2 47 195 1172 1327 7.18e-18 81.6
Msa0532260 AT4G12020.5 38.854 157 87 2 47 195 1105 1260 7.34e-18 81.6
Msa0532260 AT1G63860.6 34.247 146 89 1 46 184 517 662 7.38e-18 81.6
Msa0532260 AT1G63860.4 34.247 146 89 1 46 184 517 662 7.76e-18 81.6
Msa0532260 AT1G63860.5 34.247 146 89 1 46 184 517 662 7.76e-18 81.6
Msa0532260 AT1G63860.3 34.247 146 89 1 46 184 517 662 7.76e-18 81.6
Msa0532260 AT1G63860.1 34.247 146 89 1 46 184 517 662 7.93e-18 81.6
Msa0532260 AT1G63740.1 32.738 168 104 2 38 196 501 668 8.54e-18 81.3
Msa0532260 AT1G63740.2 32.738 168 104 2 38 196 572 739 9.77e-18 81.3
Msa0532260 AT5G46490.2 38.806 134 81 1 60 193 634 766 1.14e-17 80.9
Msa0532260 AT1G65850.2 30.964 197 128 3 5 195 555 749 1.17e-17 80.9
Msa0532260 AT1G65850.3 30.964 197 128 3 5 195 430 624 1.31e-17 80.9
Msa0532260 AT1G65850.1 30.964 197 128 3 5 195 540 734 1.39e-17 80.9
Msa0532260 AT1G63750.1 32.877 146 91 1 46 184 385 530 1.49e-17 80.5
Msa0532260 AT1G63750.2 32.877 146 91 1 46 184 385 530 1.49e-17 80.5
Msa0532260 AT1G63750.3 32.877 146 91 1 46 184 552 697 1.52e-17 80.5
Msa0532260 AT4G19510.10 36.066 122 76 2 74 195 588 707 3.48e-17 79.7
Msa0532260 AT4G08450.1 35.625 160 92 2 46 195 551 709 4.06e-17 79.3
Msa0532260 AT4G19510.2 36.066 122 76 2 74 195 588 707 4.21e-17 79.3
Msa0532260 AT4G19510.3 36.066 122 76 2 74 195 628 747 4.33e-17 79.3
Msa0532260 AT4G19510.9 36.066 122 76 2 74 195 601 720 4.69e-17 79.3
Msa0532260 AT4G08450.2 35.625 160 92 2 46 195 551 709 5.00e-17 79.3
Msa0532260 AT4G19510.5 36.066 122 76 2 74 195 628 747 7.71e-17 78.6
Msa0532260 AT4G19510.4 36.066 122 76 2 74 195 628 747 7.71e-17 78.6
Msa0532260 AT4G19510.7 36.066 122 76 2 74 195 628 747 7.71e-17 78.6
Msa0532260 AT4G19510.6 36.066 122 76 2 74 195 601 720 8.55e-17 78.6
Msa0532260 AT4G19510.8 36.066 122 76 2 74 195 591 710 9.04e-17 78.6
Msa0532260 AT4G19510.1 36.066 122 76 2 74 195 591 710 9.04e-17 78.6
Msa0532260 AT5G46270.3 35.948 153 89 3 46 190 548 699 1.78e-16 77.4
Msa0532260 AT5G46270.2 35.948 153 89 3 46 190 548 699 1.80e-16 77.4
Msa0532260 AT5G46270.4 35.948 153 89 3 46 190 559 710 1.84e-16 77.4
Msa0532260 AT5G46270.1 35.948 153 89 3 46 190 559 710 1.89e-16 77.4
Msa0532260 AT5G46270.5 35.948 153 89 3 46 190 559 710 1.89e-16 77.4
Msa0532260 AT5G45230.1 40.164 122 71 1 74 195 615 734 1.89e-16 77.4
Msa0532260 AT1G69550.1 31.210 157 103 1 42 193 613 769 2.23e-16 77.4
Msa0532260 AT5G41750.1 30.693 202 118 5 2 193 512 701 2.38e-16 77.0
Msa0532260 AT5G41750.2 30.693 202 118 5 2 193 512 701 2.38e-16 77.0
Msa0532260 AT5G17970.1 35.625 160 93 3 43 193 555 713 2.51e-16 77.0
Msa0532260 AT1G56520.2 36.290 124 76 2 70 193 580 700 3.19e-16 76.6
Msa0532260 AT1G56520.1 36.290 124 76 2 70 193 580 700 3.49e-16 76.6
Msa0532260 AT1G56520.3 36.290 124 76 2 70 193 418 538 3.84e-16 76.6
Msa0532260 AT1G56520.4 36.290 124 76 2 70 193 580 700 4.12e-16 76.6
Msa0532260 AT5G41540.1 34.459 148 88 2 42 181 544 690 8.11e-16 75.5
Msa0532260 AT5G45050.1 35.366 164 93 3 46 197 512 674 1.04e-15 75.5
Msa0532260 AT3G51560.1 33.987 153 92 2 46 190 513 664 1.13e-15 75.1
Msa0532260 AT5G45050.4 35.366 164 93 3 46 197 373 535 1.19e-15 75.1
Msa0532260 AT5G45050.3 35.366 164 93 3 46 197 512 674 1.20e-15 75.1
Msa0532260 AT5G58120.1 30.667 150 97 2 42 184 544 693 1.21e-15 75.1
Msa0532260 AT5G40910.6 34.507 142 90 2 42 181 349 489 1.41e-15 75.1
Msa0532260 AT5G40910.4 34.507 142 90 2 42 181 349 489 1.41e-15 75.1
Msa0532260 AT5G40910.1 34.752 141 89 2 43 181 534 673 1.44e-15 75.1
Msa0532260 AT5G40910.9 34.752 141 89 2 43 181 534 673 1.44e-15 75.1
Msa0532260 AT5G40910.2 34.507 142 90 2 42 181 349 489 1.47e-15 74.7
Msa0532260 AT5G40910.3 34.507 142 90 2 42 181 349 489 1.47e-15 74.7
Msa0532260 AT5G40910.5 34.507 142 90 2 42 181 349 489 1.47e-15 74.7
Msa0532260 AT5G40910.7 34.507 142 90 2 42 181 349 489 1.47e-15 74.7
Msa0532260 AT5G40910.8 34.507 142 90 2 42 181 349 489 1.47e-15 74.7
Msa0532260 AT5G41550.1 33.333 159 96 3 43 193 547 703 1.64e-15 74.7
Msa0532260 AT5G18360.1 36.800 125 78 1 69 193 582 705 1.77e-15 74.7
Msa0532260 AT4G12020.2 36.970 165 87 3 47 195 1172 1335 1.87e-15 74.7
Msa0532260 AT5G11250.3 34.043 141 89 1 45 181 518 658 2.01e-15 74.3
Msa0532260 AT5G11250.1 34.043 141 89 1 45 181 518 658 2.01e-15 74.3
Msa0532260 AT4G12020.3 36.970 165 87 3 47 195 1172 1335 2.14e-15 74.3
Msa0532260 AT5G11250.2 34.043 141 89 1 45 181 600 740 2.17e-15 74.3
Msa0532260 AT4G12020.1 36.970 165 87 3 47 195 1172 1335 2.28e-15 74.3
Msa0532260 AT4G12020.9 36.970 165 87 3 47 195 1172 1335 2.28e-15 74.3
Msa0532260 AT5G45050.2 35.714 154 86 3 46 187 512 664 2.90e-15 73.9
Msa0532260 AT5G49140.1 31.544 149 93 2 42 181 547 695 2.94e-15 73.9
Msa0532260 AT5G45210.5 34.286 140 83 2 46 177 542 680 3.59e-15 73.6
Msa0532260 AT5G45210.4 34.286 140 83 2 46 177 551 689 3.64e-15 73.6
Msa0532260 AT5G45210.1 34.286 140 83 2 46 177 523 661 3.82e-15 73.6
Msa0532260 AT3G44480.2 34.483 116 76 0 66 181 663 778 4.30e-15 73.6
Msa0532260 AT3G44480.4 34.483 116 76 0 66 181 663 778 4.47e-15 73.6
Msa0532260 AT3G44480.1 34.483 116 76 0 66 181 663 778 4.47e-15 73.6
Msa0532260 AT3G44480.3 34.483 116 76 0 66 181 663 778 4.49e-15 73.6
Msa0532260 AT3G44480.5 34.483 116 76 0 66 181 663 778 4.49e-15 73.6
Msa0532260 AT4G14370.1 31.288 163 102 3 36 190 494 654 5.04e-15 73.2
Msa0532260 AT4G14370.2 31.288 163 102 3 36 190 537 697 5.80e-15 73.2
Msa0532260 AT4G14370.3 31.288 163 102 3 36 190 537 697 5.80e-15 73.2
Msa0532260 AT4G36150.1 36.066 122 76 1 74 195 609 728 7.83e-15 72.8
Msa0532260 AT4G19530.2 30.120 166 102 2 42 195 578 741 9.67e-15 72.4
Msa0532260 AT4G19530.1 30.120 166 102 2 42 195 578 741 1.03e-14 72.4
Msa0532260 AT5G46450.1 32.168 143 90 1 46 181 550 692 1.08e-14 72.4
Msa0532260 AT5G46450.3 32.168 143 90 1 46 181 550 692 1.10e-14 72.4
Msa0532260 AT5G46450.2 32.168 143 90 1 46 181 527 669 1.11e-14 72.4
Msa0532260 AT5G17880.2 33.533 167 97 4 41 195 572 736 1.19e-14 72.4
Msa0532260 AT5G17880.1 33.533 167 97 4 41 195 572 736 1.23e-14 72.4
Msa0532260 AT1G72860.3 34.454 119 78 0 79 197 592 710 1.32e-14 72.0
Msa0532260 AT5G51630.5 29.947 187 120 3 2 181 442 624 1.40e-14 72.0
Msa0532260 AT5G51630.5 31.447 159 104 3 41 195 640 797 1.08e-13 69.3
Msa0532260 AT2G17060.2 31.176 170 103 2 38 195 590 757 1.47e-14 72.0
Msa0532260 AT1G72860.2 34.454 119 78 0 79 197 592 710 1.47e-14 72.0
Msa0532260 AT1G56540.2 32.927 164 100 3 38 193 376 537 1.53e-14 72.0
Msa0532260 AT5G51630.4 30.653 199 126 4 2 193 442 635 1.55e-14 72.0
Msa0532260 AT5G51630.4 31.447 159 104 3 41 195 640 797 1.15e-13 69.3
Msa0532260 AT5G51630.6 30.653 199 126 4 2 193 442 635 1.55e-14 72.0
Msa0532260 AT5G51630.6 31.447 159 104 3 41 195 640 797 1.15e-13 69.3
Msa0532260 AT5G51630.2 30.653 199 126 4 2 193 442 635 1.55e-14 72.0
Msa0532260 AT5G51630.2 31.447 159 104 3 41 195 640 797 1.03e-13 69.7
Msa0532260 AT2G17060.1 31.176 170 103 2 38 195 590 757 1.71e-14 71.6
Msa0532260 AT5G51630.3 30.653 199 126 4 2 193 458 651 1.76e-14 71.6
Msa0532260 AT5G51630.3 31.447 159 104 3 41 195 656 813 1.17e-13 69.3
Msa0532260 AT5G51630.1 30.653 199 126 4 2 193 506 699 1.87e-14 71.6
Msa0532260 AT5G51630.1 31.447 159 104 3 41 195 704 861 1.14e-13 69.3
Msa0532260 AT1G56540.1 32.927 164 100 3 38 193 540 701 1.90e-14 71.6
Msa0532260 AT5G46520.2 33.333 162 97 3 41 193 584 743 2.07e-14 71.6
Msa0532260 AT5G46520.1 33.333 162 97 3 41 193 546 705 2.25e-14 71.6
Msa0532260 AT1G64070.1 35.119 168 99 3 36 195 536 701 2.49e-14 71.2
Msa0532260 AT4G36140.1 31.373 153 96 2 46 190 953 1104 2.51e-14 71.2
Msa0532260 AT5G46510.2 33.333 162 97 3 41 193 545 704 2.73e-14 71.2
Msa0532260 AT5G46510.1 33.333 162 97 3 41 193 545 704 2.82e-14 71.2
Msa0532260 AT4G19500.2 34.132 167 100 4 36 193 555 720 2.84e-14 71.2
Msa0532260 AT4G36140.2 31.373 153 96 2 46 190 768 919 2.98e-14 71.2
Msa0532260 AT5G45200.3 32.558 129 85 1 67 195 612 738 3.48e-14 70.9
Msa0532260 AT4G19500.1 34.132 167 100 4 36 193 1078 1243 3.82e-14 70.9
Msa0532260 AT5G45200.1 32.558 129 85 1 67 195 612 738 3.84e-14 70.9
Msa0532260 AT5G45200.2 32.558 129 85 1 67 195 368 494 4.14e-14 70.5
Msa0532260 AT1G72840.1 34.821 112 69 1 57 164 562 673 4.75e-14 70.5
Msa0532260 AT1G72840.4 34.821 112 69 1 57 164 396 507 5.06e-14 70.5
Msa0532260 AT1G72840.2 34.821 112 69 1 57 164 562 673 5.11e-14 70.5
Msa0532260 AT1G72840.3 34.821 112 69 1 57 164 562 673 5.11e-14 70.5
Msa0532260 AT3G25510.2 34.615 130 85 0 66 195 409 538 5.51e-14 70.5
Msa0532260 AT3G25510.1 34.615 130 85 0 66 195 409 538 5.51e-14 70.5
Msa0532260 AT5G45260.1 33.333 144 86 2 46 180 519 661 6.25e-14 70.1
Msa0532260 AT5G45260.2 33.333 144 86 2 46 180 519 661 6.43e-14 70.1
Msa0532260 AT5G45260.3 33.333 144 86 2 46 180 519 661 6.43e-14 70.1
Msa0532260 AT4G16860.1 32.450 151 99 2 45 193 693 842 7.24e-14 70.1
Msa0532260 AT4G16860.2 32.450 151 99 2 45 193 531 680 7.37e-14 70.1
Msa0532260 AT5G22690.3 32.716 162 97 3 45 195 551 711 7.94e-14 69.7
Msa0532260 AT4G16900.3 30.573 157 106 2 45 199 507 662 8.09e-14 69.7
Msa0532260 AT5G22690.4 32.716 162 97 3 45 195 551 711 8.62e-14 69.7
Msa0532260 AT5G22690.1 32.716 162 97 3 45 195 551 711 9.56e-14 69.7
Msa0532260 AT5G22690.2 32.716 162 97 3 45 195 551 711 1.04e-13 69.3
Msa0532260 AT5G48770.1 31.361 169 107 1 39 198 540 708 1.70e-13 68.9
Msa0532260 AT4G16900.2 31.126 151 101 2 45 193 507 656 1.85e-13 68.9
Msa0532260 AT4G16900.1 31.126 151 101 2 45 193 507 656 2.41e-13 68.6
Msa0532260 AT1G63730.1 32.704 159 99 3 42 193 543 700 2.83e-13 68.2
Msa0532260 AT5G44870.1 31.325 166 100 3 42 195 614 777 3.29e-13 68.2
Msa0532260 AT5G44870.2 31.325 166 100 3 42 195 350 513 3.87e-13 67.8
Msa0532260 AT5G18350.1 34.646 127 83 0 70 196 598 724 5.75e-13 67.4
Msa0532260 AT4G16940.6 29.375 160 103 1 4 153 465 624 6.57e-13 67.0
Msa0532260 AT4G16940.2 29.375 160 103 1 4 153 465 624 6.57e-13 67.0
Msa0532260 AT4G16940.3 29.375 160 103 1 4 153 465 624 6.57e-13 67.0
Msa0532260 AT4G16940.5 29.375 160 103 1 4 153 465 624 6.57e-13 67.0
Msa0532260 AT4G16940.1 29.375 160 103 1 4 153 465 624 6.96e-13 67.0
Msa0532260 AT4G16940.4 29.375 160 103 1 4 153 465 624 6.96e-13 67.0
Msa0532260 AT4G09435.2 35.294 102 62 1 59 156 18 119 7.19e-13 66.6
Msa0532260 AT4G09435.1 35.294 102 62 1 59 156 18 119 8.49e-13 66.6
Msa0532260 AT3G44400.2 32.168 143 90 2 46 181 592 734 8.50e-13 67.0
Msa0532260 AT3G44400.1 32.168 143 90 2 46 181 592 734 8.50e-13 67.0
Msa0532260 AT3G44400.4 32.168 143 90 2 46 181 592 734 8.50e-13 67.0
Msa0532260 AT3G44400.5 32.168 143 90 2 46 181 592 734 8.50e-13 67.0
Msa0532260 AT3G44400.3 32.168 143 90 2 46 181 592 734 8.50e-13 67.0
Msa0532260 AT5G46470.1 31.333 150 96 2 44 193 566 708 9.23e-13 66.6
Msa0532260 AT1G17600.1 34.951 103 67 0 59 161 568 670 2.75e-12 65.5
Msa0532260 AT5G38850.1 34.959 123 79 1 74 196 571 692 3.26e-12 65.1
Msa0532260 AT4G19520.3 30.519 154 97 2 46 190 523 675 4.35e-12 64.7
Msa0532260 AT4G16960.1 34.454 119 77 1 69 187 584 701 4.39e-12 64.7
Msa0532260 AT4G19520.1 30.519 154 97 2 46 190 523 675 4.79e-12 64.7
Msa0532260 AT4G19520.5 30.519 154 97 2 46 190 523 675 4.98e-12 64.7
Msa0532260 AT4G19520.2 30.519 154 97 2 46 190 523 675 5.40e-12 64.7
Msa0532260 AT4G19520.4 30.519 154 97 2 46 190 523 675 5.40e-12 64.7
Msa0532260 AT4G16890.5 31.875 160 100 3 42 193 530 688 8.72e-12 63.9
Msa0532260 AT4G16890.5 34.862 109 70 1 87 195 743 850 1.89e-11 62.8
Msa0532260 AT4G16890.2 31.875 160 100 3 42 193 539 697 8.73e-12 63.9
Msa0532260 AT4G16890.3 31.875 160 100 3 42 193 530 688 8.92e-12 63.9
Msa0532260 AT4G16890.3 34.862 109 70 1 87 195 743 850 1.73e-11 63.2
Msa0532260 AT4G16890.1 31.875 160 100 3 42 193 539 697 9.06e-12 63.9
Msa0532260 AT4G16890.1 34.862 109 70 1 87 195 752 859 1.88e-11 62.8
Msa0532260 AT4G16890.4 31.875 160 100 3 42 193 384 542 9.26e-12 63.9
Msa0532260 AT5G45060.2 23.984 246 126 3 4 195 542 780 1.84e-11 62.8
Msa0532260 AT5G45060.1 23.984 246 126 3 4 195 542 780 1.84e-11 62.8
Msa0532260 AT4G16920.4 31.126 151 101 2 45 193 676 825 2.47e-11 62.8
Msa0532260 AT4G16920.7 31.126 151 101 2 45 193 676 825 2.47e-11 62.8
Msa0532260 AT4G16920.9 31.126 151 101 2 45 193 676 825 2.54e-11 62.4
Msa0532260 AT5G18370.1 32.258 124 84 0 70 193 639 762 2.57e-11 62.4
Msa0532260 AT4G16920.6 31.126 151 101 2 45 193 676 825 2.67e-11 62.4
Msa0532260 AT4G16920.3 31.126 151 101 2 45 193 676 825 2.68e-11 62.4
Msa0532260 AT4G16920.5 31.126 151 101 2 45 193 676 825 2.68e-11 62.4
Msa0532260 AT4G16920.2 31.126 151 101 2 45 193 676 825 2.68e-11 62.4
Msa0532260 AT4G16920.8 31.126 151 101 2 45 193 676 825 2.68e-11 62.4
Msa0532260 AT4G16920.1 31.126 151 101 2 45 193 676 825 2.69e-11 62.4
Msa0532260 AT5G45250.1 33.871 124 80 1 72 195 615 736 3.41e-11 62.0
Msa0532260 AT2G17050.1 29.286 140 90 2 46 177 380 518 3.45e-11 62.0
Msa0532260 AT4G16950.6 31.126 151 101 2 45 193 682 831 3.52e-11 62.0
Msa0532260 AT4G16950.2 31.126 151 101 2 45 193 682 831 3.57e-11 62.0
Msa0532260 AT4G16950.5 31.126 151 101 2 45 193 682 831 3.65e-11 62.0
Msa0532260 AT2G17050.2 29.286 140 90 2 46 177 380 518 3.66e-11 62.0
Msa0532260 AT4G16950.3 31.126 151 101 2 45 193 682 831 3.68e-11 62.0
Msa0532260 AT4G16950.4 31.126 151 101 2 45 193 682 831 3.87e-11 62.0
Msa0532260 AT4G16950.1 31.126 151 101 2 45 193 682 831 3.90e-11 62.0
Msa0532260 AT2G17050.3 29.286 140 90 2 46 177 380 518 4.28e-11 62.0

Find 171 sgRNAs with CRISPR-Local

Find 371 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTTATCATGAGACCTTTA+TGG 0.161546 4_1:+6289918 None:intergenic
TGAACCAGTTGGCGAAAATT+TGG 0.190447 4_1:-6288474 Msa0532260:three_prime_UTR
ACTTTCACGAGATGCAATTT+TGG 0.207123 4_1:-6289464 Msa0532260:three_prime_UTR
ACTGGACCACTTCATTTCTT+TGG 0.207684 4_1:-6289089 Msa0532260:three_prime_UTR
AGAGATACAAGCTTATTTAT+AGG 0.242113 4_1:+6286615 None:intergenic
TAATTGAAGGCTAGTCAATT+TGG 0.243002 4_1:+6288799 None:intergenic
CAATGGAAACTAAATTTCTT+TGG 0.245556 4_1:+6291151 None:intergenic
CTTACTCTCCTTAGAGCATT+AGG 0.249720 4_1:+6287873 None:intergenic
ATTTCCTTGTGTGGCTATAA+AGG 0.256730 4_1:-6289691 Msa0532260:three_prime_UTR
CTGTTTAATTATTAACAAAT+TGG 0.272914 4_1:-6289818 Msa0532260:exon
AGGGACCTCTTAAACAGTTT+TGG 0.273509 4_1:+6287356 None:intergenic
CATTGCAGCAGAGTCGTTTC+AGG 0.274257 4_1:-6289042 Msa0532260:three_prime_UTR
CTCGGCTCTTCACATATAAT+TGG 0.281116 4_1:+6289157 None:intergenic
GAACCAGTTGGCGAAAATTT+GGG 0.281243 4_1:-6288473 Msa0532260:three_prime_UTR
CACTTAAAGTCTTATAGTTC+TGG 0.281248 4_1:-6289203 Msa0532260:three_prime_UTR
CTCAGATTGCTTCATCTTGC+TGG 0.281387 4_1:-6291270 Msa0532260:CDS
AAAGATTTATAGACAGCTTA+TGG 0.284677 4_1:-6286533 Msa0532260:three_prime_UTR
CTGGACCACTTCATTTCTTT+GGG 0.290817 4_1:-6289088 Msa0532260:three_prime_UTR
TAGAAAGGTTCTTAGTCTTT+TGG 0.302460 4_1:-6289509 Msa0532260:three_prime_UTR
TGCAAAGAATTCTAAGGAAT+TGG 0.309129 4_1:-6289431 Msa0532260:three_prime_UTR
TCTGCAGGAATGAATGTTAA+AGG 0.310460 4_1:+6291180 None:intergenic
CTCTGAGAACTCTTATTCTA+TGG 0.334523 4_1:-6289841 Msa0532260:CDS
CTTCATGTTCTCAAATGCTT+TGG 0.337558 4_1:+6291296 None:intergenic
CTTCCCTACTGCAGCTGGTC+TGG 0.339703 4_1:-6287293 Msa0532260:three_prime_UTR
TTTAAGTGCAAAGAATTCTA+AGG 0.346843 4_1:-6289437 Msa0532260:three_prime_UTR
TTCCTTCGATCATTCGGTCT+TGG 0.368885 4_1:-6289651 Msa0532260:three_prime_UTR
ACGTCCAACGTGAGCTTGAT+TGG 0.369157 4_1:-6287907 Msa0532260:three_prime_UTR
CTAGAACATATTCATAGAAA+TGG 0.370470 4_1:-6286847 Msa0532260:three_prime_UTR
GCAGAGAGTAGTATCAAATA+TGG 0.372012 4_1:-6288579 Msa0532260:three_prime_UTR
CTAGTCCCCTTCTCGGCTAC+TGG 0.376675 4_1:-6289107 Msa0532260:three_prime_UTR
TTCAACGTATACATGGTTCT+TGG 0.379579 4_1:+6289866 None:intergenic
AGCAGAGTCGTTTCAGGAGG+GGG 0.379621 4_1:-6289036 Msa0532260:three_prime_UTR
CCAACAAGAACATTCTTATC+TGG 0.387749 4_1:+6288437 None:intergenic
AAAGACTAAGAACCTTTCTA+AGG 0.391507 4_1:+6289512 None:intergenic
CTCCTTAGAGCATTAGGATC+AGG 0.393377 4_1:+6287879 None:intergenic
CCAGATAAGAATGTTCTTGT+TGG 0.394164 4_1:-6288437 Msa0532260:three_prime_UTR
AGAAGAACCTTCATAATTGA+AGG 0.395230 4_1:+6288786 None:intergenic
AACTTCTTCCCTACTGCAGC+TGG 0.402892 4_1:-6287298 Msa0532260:three_prime_UTR
CATGTAGGTTTCAGCACTTT+CGG 0.407138 4_1:-6286767 Msa0532260:three_prime_UTR
GGAAGAGGACTTGGAACAAA+TGG 0.409764 4_1:-6289797 Msa0532260:three_prime_UTR
ACTCGAGATTCGACTCTAAC+TGG 0.410087 4_1:+6292365 None:intergenic
GGCACTTCTAGTCCCCTTCT+CGG 0.413999 4_1:-6289114 Msa0532260:three_prime_UTR
AAGTATTTCCTTCGATCATT+CGG 0.418554 4_1:-6289657 Msa0532260:three_prime_UTR
CTTGCTGGTGTACAACTTGA+TGG 0.419917 4_1:-6291255 Msa0532260:CDS
AGTCAAGTTGGCGTGGATCT+TGG 0.424998 4_1:-6287938 Msa0532260:three_prime_UTR
AAATACATACAAGAAATGTT+TGG 0.427922 4_1:-6286695 Msa0532260:three_prime_UTR
CAGTGGGAACTACTTCTTGA+TGG 0.437883 4_1:+6289556 None:intergenic
AAGAATTCAGTTCAAGTCTT+CGG 0.440719 4_1:-6287715 Msa0532260:intron
TGACTAGCCTTCAATTATGA+AGG 0.441670 4_1:-6288793 Msa0532260:three_prime_UTR
TATGGAGATGTCCAGTGGTA+TGG 0.442238 4_1:+6289936 None:intergenic
CTATAAATCTTTCTCAGAGT+TGG 0.442958 4_1:+6286544 None:intergenic
GCCCTGATCCTAATGCTCTA+AGG 0.452702 4_1:-6287881 Msa0532260:three_prime_UTR
TGATTAATCATCACGTATCC+TGG 0.454327 4_1:+6287841 None:intergenic
ACTTAAACAGTATTTGCAAA+TGG 0.456285 4_1:-6287802 Msa0532260:three_prime_UTR
TATTTCCGAGGTCCTTAGAA+AGG 0.456468 4_1:-6289524 Msa0532260:three_prime_UTR
TAACAAATTGGAAGAGGACT+TGG 0.456569 4_1:-6289806 Msa0532260:three_prime_UTR
TTTATAGTTCCTCAAGTGAA+AGG 0.459184 4_1:-6288757 Msa0532260:three_prime_UTR
TGTTCTAGCACATGTCCAAC+AGG 0.459940 4_1:+6286862 None:intergenic
CAGAGATTTCAACGTATACA+TGG 0.467361 4_1:+6289859 None:intergenic
TGTGGTGGTTTCTCGCTCCC+TGG 0.473298 4_1:-6288832 Msa0532260:three_prime_UTR
TACATGGTTCTTGGAAGGTT+AGG 0.473976 4_1:+6289875 None:intergenic
TCCTTAGTTCAAACACCTGC+TGG 0.477280 4_1:-6289604 Msa0532260:three_prime_UTR
TTATTCAAGATCATTGTGTA+GGG 0.478544 4_1:-6286649 Msa0532260:three_prime_UTR
CTTCATTTCTTTGGGTACTA+CGG 0.479932 4_1:-6289080 Msa0532260:three_prime_UTR
ACAAGCTTATTTATAGGAGC+AGG 0.480115 4_1:+6286621 None:intergenic
GGTCTGGATTTGCCGACCGC+AGG 0.480601 4_1:-6287277 Msa0532260:three_prime_UTR
CGTCCAACGTGAGCTTGATT+GGG 0.482135 4_1:-6287906 Msa0532260:three_prime_UTR
CTGAAACGACTCTGCTGCAA+TGG 0.482385 4_1:+6289043 None:intergenic
GTTCGCCACCTTTGAAAATG+AGG 0.482686 4_1:-6288606 Msa0532260:three_prime_UTR
ACCACTGGACATCTCCATAA+AGG 0.482951 4_1:-6289932 Msa0532260:CDS
CACGCCAACTTGACTTTCCT+AGG 0.487454 4_1:+6287946 None:intergenic
TAGAACATATTCATAGAAAT+GGG 0.489919 4_1:-6286846 Msa0532260:three_prime_UTR
CCACATGCTTCAGCAATAAG+AGG 0.491137 4_1:+6287971 None:intergenic
GTTATTCAAGATCATTGTGT+AGG 0.491271 4_1:-6286650 Msa0532260:three_prime_UTR
GGATTAATTGAAATTCATGT+AGG 0.497356 4_1:-6286782 Msa0532260:three_prime_UTR
GCTGCAATGGATGGCAGAGG+GGG 0.497553 4_1:+6289056 None:intergenic
GAAATTTGAGATGGCTGTGT+TGG 0.500053 4_1:-6291212 Msa0532260:CDS
AACACTCAGAGGGGTCATTA+CGG 0.500790 4_1:+6286573 None:intergenic
TGCTTGTATCCTCGACATCA+AGG 0.501201 4_1:+6287336 None:intergenic
ATGGAGATGTCCAGTGGTAT+GGG 0.504712 4_1:+6289937 None:intergenic
GATCACTCTTCAAGTAGAGC+TGG 0.504877 4_1:-6288381 Msa0532260:three_prime_UTR
GAATGAAAGTGAGGATATCA+AGG 0.505347 4_1:-6292447 Msa0532260:CDS
TTATAGTTCCTCAAGTGAAA+GGG 0.505486 4_1:-6288756 Msa0532260:three_prime_UTR
CAATTTGGATAATTATCACC+AGG 0.506623 4_1:+6288814 None:intergenic
ATTGGATATATTTCCTTGTG+TGG 0.506968 4_1:-6289700 Msa0532260:three_prime_UTR
AAATGATTATGTTATGAGGA+AGG 0.509644 4_1:-6288954 Msa0532260:three_prime_UTR
GCAGAGTCGTTTCAGGAGGG+GGG 0.510877 4_1:-6289035 Msa0532260:three_prime_UTR
AAGTTATGCCCTTTCACTTG+AGG 0.512620 4_1:+6288748 None:intergenic
GAGAGTAAGATAAGGAAGCC+AGG 0.517624 4_1:-6287859 Msa0532260:three_prime_UTR
AATTATTAACAAATTGGAAG+AGG 0.521283 4_1:-6289812 Msa0532260:exon
TCCTTAGAGCATTAGGATCA+GGG 0.523289 4_1:+6287880 None:intergenic
GCCAGCAGGTGTTTGAACTA+AGG 0.524331 4_1:+6289603 None:intergenic
AGGTCTCTTCTAATTCGAAT+GGG 0.525288 4_1:-6289311 Msa0532260:three_prime_UTR
TGTTTGGTTTAAGTGAATGT+TGG 0.527371 4_1:-6286679 Msa0532260:three_prime_UTR
TTCGAATTAGAAGAGACCTC+AGG 0.533336 4_1:+6289315 None:intergenic
CGGAAATAGATGACAGACAG+TGG 0.535107 4_1:+6289539 None:intergenic
AGGTTCCAAAACTGTTTAAG+AGG 0.540445 4_1:-6287361 Msa0532260:three_prime_UTR
TAACAAATATATCGACAGCT+TGG 0.543544 4_1:+6289279 None:intergenic
GAGGTCTCTTCTAATTCGAA+TGG 0.543745 4_1:-6289312 Msa0532260:three_prime_UTR
TCTAAATTAATTGAATGTTG+TGG 0.543912 4_1:-6289367 Msa0532260:three_prime_UTR
TCTGCTGCAATGGATGGCAG+AGG 0.546383 4_1:+6289053 None:intergenic
ATCTTTCAAGAAATTTGAGA+TGG 0.547928 4_1:-6291221 Msa0532260:CDS
ACGTATACATGGTTCTTGGA+AGG 0.548965 4_1:+6289870 None:intergenic
AACCAGTTGGCGAAAATTTG+GGG 0.551858 4_1:-6288472 Msa0532260:three_prime_UTR
AAGTGGTCCAGTAGCCGAGA+AGG 0.553569 4_1:+6289100 None:intergenic
TGAAGAGTGATCCTCTTGGC+AGG 0.553675 4_1:+6288392 None:intergenic
CTGCTGCAATGGATGGCAGA+GGG 0.554935 4_1:+6289054 None:intergenic
TAATGCTTTCACTTAAAACA+TGG 0.555001 4_1:+6287772 None:intergenic
ATTCTGTAAACCGTGAAAGT+AGG 0.555555 4_1:+6288870 None:intergenic
TCTGAGGTTTCCCATACCAC+TGG 0.561143 4_1:-6289947 Msa0532260:CDS
CTCATATATGATGAACCAGT+TGG 0.562231 4_1:-6288485 Msa0532260:three_prime_UTR
TGGGAAACCTCAGACAGCCT+TGG 0.562909 4_1:+6289956 None:intergenic
AGGTCGCAACAATTTGAGAA+TGG 0.567579 4_1:+6286738 None:intergenic
GTAGGTTTCAGCACTTTCGG+TGG 0.570554 4_1:-6286764 Msa0532260:three_prime_UTR
AAATCCAGACCAGCTGCAGT+AGG 0.570908 4_1:+6287289 None:intergenic
AAGAATGTTCTTGTTGGTGA+TGG 0.577141 4_1:-6288431 Msa0532260:three_prime_UTR
GCTCTAAGGAGAGTAAGATA+AGG 0.577372 4_1:-6287867 Msa0532260:three_prime_UTR
TGCAGCAGAGTCGTTTCAGG+AGG 0.579723 4_1:-6289039 Msa0532260:three_prime_UTR
AAAGACGTGATATAATTGCC+AGG 0.580688 4_1:-6288309 Msa0532260:intron
CAGCAGAGTCGTTTCAGGAG+GGG 0.581936 4_1:-6289037 Msa0532260:three_prime_UTR
TAAGAGGTCCCTTGATGTCG+AGG 0.582426 4_1:-6287345 Msa0532260:three_prime_UTR
AACGACTCTGCTGCAATGGA+TGG 0.584736 4_1:+6289047 None:intergenic
TAGGTTTCAGCACTTTCGGT+GGG 0.584771 4_1:-6286763 Msa0532260:three_prime_UTR
ATAAGAGATGACATGCCAGC+AGG 0.584813 4_1:+6289589 None:intergenic
TCTGTGACAGAGACACCTGT+TGG 0.585678 4_1:-6286877 Msa0532260:three_prime_UTR
CTACTACACCACAATACACT+CGG 0.585686 4_1:+6289139 None:intergenic
TCGAATTAGAAGAGACCTCA+GGG 0.588385 4_1:+6289316 None:intergenic
ATCCAAGACCGAATGATCGA+AGG 0.594008 4_1:+6289649 None:intergenic
GCAGCAGAGTCGTTTCAGGA+GGG 0.594275 4_1:-6289038 Msa0532260:three_prime_UTR
TTGGATGAGAAACACTCAGA+GGG 0.595328 4_1:+6286563 None:intergenic
GCAGATAACATAACATCAGA+TGG 0.595432 4_1:-6288691 Msa0532260:three_prime_UTR
AGTGGTCCAGTAGCCGAGAA+GGG 0.596021 4_1:+6289101 None:intergenic
TAGTACCCAAAGAAATGAAG+TGG 0.596335 4_1:+6289083 None:intergenic
TAATACTCAAAGATTGTCCA+AGG 0.597568 4_1:-6289973 Msa0532260:CDS
TGGTTCTTGGAAGGTTAGGA+AGG 0.598875 4_1:+6289879 None:intergenic
TGCTGAAGCATGTGGTGCCT+AGG 0.599261 4_1:-6287963 Msa0532260:three_prime_UTR
TGCTGCAATGGATGGCAGAG+GGG 0.604867 4_1:+6289055 None:intergenic
AATCCAGACCAGCTGCAGTA+GGG 0.606835 4_1:+6287290 None:intergenic
TTGAGATGGCTGTGTTGGAA+CGG 0.607844 4_1:-6291207 Msa0532260:CDS
AGATTGTCCAAGGCTGTCTG+AGG 0.609340 4_1:-6289963 Msa0532260:CDS
ACGATTGTCAAGTCATGTGG+TGG 0.618635 4_1:-6288847 Msa0532260:three_prime_UTR
CCTCTTATTGCTGAAGCATG+TGG 0.624394 4_1:-6287971 Msa0532260:three_prime_UTR
TACTTGAAGAGTGATCCTCT+TGG 0.627194 4_1:+6288388 None:intergenic
CTGTCTGTCATCTATTTCCG+AGG 0.628830 4_1:-6289536 Msa0532260:three_prime_UTR
GGTGCCTAGGAAAGTCAAGT+TGG 0.629770 4_1:-6287950 Msa0532260:three_prime_UTR
CACTCGTCGAACATCTAGAG+TGG 0.631564 4_1:-6286455 Msa0532260:three_prime_UTR
GCTTGTATCCTCGACATCAA+GGG 0.631643 4_1:+6287337 None:intergenic
AAGAACCTTTCTAAGGACCT+CGG 0.633037 4_1:+6289519 None:intergenic
TATTCAAGATCATTGTGTAG+GGG 0.633353 4_1:-6286648 Msa0532260:three_prime_UTR
GTGTATTGTGGTGTAGTAGT+TGG 0.636688 4_1:-6289135 Msa0532260:three_prime_UTR
CATTCAGCTCTATAAGAGAG+AGG 0.638242 4_1:-6288630 Msa0532260:three_prime_UTR
GTAGTATCAAATATGGAACC+TGG 0.639177 4_1:-6288572 Msa0532260:three_prime_UTR
GTGGTCCAGTAGCCGAGAAG+GGG 0.639822 4_1:+6289102 None:intergenic
CAGAGTCGTTTCAGGAGGGG+GGG 0.640217 4_1:-6289034 Msa0532260:three_prime_UTR
ACCTTTATGGAGATGTCCAG+TGG 0.643406 4_1:+6289931 None:intergenic
ACAATCTCGACTTTGTCACC+AGG 0.643713 4_1:+6288554 None:intergenic
CCACCTTTGAAAATGAGGAG+TGG 0.645361 4_1:-6288601 Msa0532260:three_prime_UTR
AGTGTCATCTGCAATCAAAG+TGG 0.650441 4_1:+6289765 None:intergenic
AAACAGTCAAAACCTGCGGT+CGG 0.653364 4_1:+6287265 None:intergenic
AAAATGAATGTCCTGCCAAG+AGG 0.655746 4_1:-6288403 Msa0532260:three_prime_UTR
GTGAAGAGCCGAGTGTATTG+TGG 0.662504 4_1:-6289147 Msa0532260:three_prime_UTR
CTAGGAAAGTCAAGTTGGCG+TGG 0.665059 4_1:-6287945 Msa0532260:three_prime_UTR
AATACGATTGTCAAGTCATG+TGG 0.665514 4_1:-6288850 Msa0532260:three_prime_UTR
GGAAATAGATGACAGACAGT+GGG 0.670829 4_1:+6289540 None:intergenic
TAGATGTTCGACGAGTGACG+TGG 0.676500 4_1:+6286461 None:intergenic
AAATCCTTTATAGCCACACA+AGG 0.677762 4_1:+6289687 None:intergenic
AATTTGGATAATTATCACCA+GGG 0.678375 4_1:+6288815 None:intergenic
CTTCCCAATCAAGCTCACGT+TGG 0.678480 4_1:+6287903 None:intergenic
ACCTAAACAGTCAAAACCTG+CGG 0.681249 4_1:+6287261 None:intergenic
TGGATGAGAAACACTCAGAG+GGG 0.744439 4_1:+6286564 None:intergenic
GTTGGATGAGAAACACTCAG+AGG 0.765376 4_1:+6286562 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAATAAATATATAAATAA+AGG + chr4_1:6288765-6288784 None:intergenic 0.0%
!!! AAAAAAAAAAGTTTTATACT+TGG + chr4_1:6288059-6288078 None:intergenic 10.0%
!!! ATAATTTGTTATTTCATTAT+TGG - chr4_1:6288168-6288187 Msa0532260:intron 10.0%
!! AAATAAATAAATCAACATAA+AGG + chr4_1:6291662-6291681 None:intergenic 10.0%
!!! AAATTTGTTTACAATAAAGT+TGG - chr4_1:6286646-6286665 Msa0532260:three_prime_UTR 15.0%
!!! ATCTAAAACTTAAATGAATT+GGG - chr4_1:6288008-6288027 Msa0532260:intron 15.0%
!!! TAATGAGAATTTAAAAGTAT+GGG + chr4_1:6288390-6288409 None:intergenic 15.0%
!!! TTTTTAATACCGATATAAAA+TGG + chr4_1:6288490-6288509 None:intergenic 15.0%
!! CTGTTTAATTATTAACAAAT+TGG - chr4_1:6289073-6289092 Msa0532260:three_prime_UTR 15.0%
!! ATAAAAATGATTATGTTATG+AGG - chr4_1:6289933-6289952 Msa0532260:CDS 15.0%
!!! ACAATTTTAAAAGATCATTT+TGG - chr4_1:6290766-6290785 Msa0532260:intron 15.0%
!!! CAATTTTAAAAGATCATTTT+GGG - chr4_1:6290767-6290786 Msa0532260:intron 15.0%
!!! AATTTTAAAAGATCATTTTG+GGG - chr4_1:6290768-6290787 Msa0532260:intron 15.0%
!!! ATTTTGTTATGATAAGTTTT+TGG - chr4_1:6291932-6291951 Msa0532260:intron 15.0%
!! AAAGAAAATTAAAGTTTGAA+TGG + chr4_1:6291975-6291994 None:intergenic 15.0%
!!! ACATAGCTTTTTTCTTTATT+GGG - chr4_1:6287045-6287064 Msa0532260:intron 20.0%
!! ATATATCCATAACATCATTT+CGG + chr4_1:6287076-6287095 None:intergenic 20.0%
!! ATGGATATATTAAATAGTTG+TGG - chr4_1:6287086-6287105 Msa0532260:intron 20.0%
!!! AATAAAAGAAAAAGTACAAG+AGG + chr4_1:6287319-6287338 None:intergenic 20.0%
!!! AAAAGCTTTGAATATTAGTT+TGG - chr4_1:6287426-6287445 Msa0532260:intron 20.0%
!!! ATTTTGAAAAATTTCACTGA+AGG + chr4_1:6287915-6287934 None:intergenic 20.0%
!!! CATCTAAAACTTAAATGAAT+TGG - chr4_1:6288007-6288026 Msa0532260:intron 20.0%
!!! TTTATAAAGCACTAAAACAT+TGG + chr4_1:6288092-6288111 None:intergenic 20.0%
!! CTAATGAGAATTTAAAAGTA+TGG + chr4_1:6288391-6288410 None:intergenic 20.0%
!!! AACACTTAACCATTTTATAT+CGG - chr4_1:6288478-6288497 Msa0532260:three_prime_UTR 20.0%
!! AATTATTAACAAATTGGAAG+AGG - chr4_1:6289079-6289098 Msa0532260:three_prime_UTR 20.0%
!! TCTAAATTAATTGAATGTTG+TGG - chr4_1:6289524-6289543 Msa0532260:three_prime_UTR 20.0%
!! AACTCAAATTAAATATTACC+TGG + chr4_1:6290603-6290622 None:intergenic 20.0%
!!! ATTTGAATTTCTCTTATTTC+GGG + chr4_1:6290673-6290692 None:intergenic 20.0%
!!! CATTTGAATTTCTCTTATTT+CGG + chr4_1:6290674-6290693 None:intergenic 20.0%
!!! ATTTTAAAAGATCATTTTGG+GGG - chr4_1:6290769-6290788 Msa0532260:intron 20.0%
!! GTTTATGAATTTAATTCTCA+TGG - chr4_1:6290791-6290810 Msa0532260:intron 20.0%
!! ATTAAAAATGCAGACAATTT+GGG - chr4_1:6291138-6291157 Msa0532260:CDS 20.0%
!! AATGAGATAACTAACAAATA+CGG + chr4_1:6291245-6291264 None:intergenic 20.0%
!! ATATAAACTATAATGCTTTC+TGG - chr4_1:6291359-6291378 Msa0532260:intron 20.0%
!! TATAAACTATAATGCTTTCT+GGG - chr4_1:6291360-6291379 Msa0532260:intron 20.0%
!! TTTCTTCTTAATACATAGTA+CGG + chr4_1:6291408-6291427 None:intergenic 20.0%
!!! TTGAGAATTCTATTTTTGAT+TGG - chr4_1:6291481-6291500 Msa0532260:intron 20.0%
!!! TCAAACTTTAATTTTCTTTC+AGG - chr4_1:6291976-6291995 Msa0532260:intron 20.0%
!! TAGAACATATTCATAGAAAT+GGG - chr4_1:6292045-6292064 Msa0532260:intron 20.0%
!! AAATACATACAAGAAATGTT+TGG - chr4_1:6292196-6292215 Msa0532260:intron 20.0%
! TAGAACATCATTTGAAAATG+AGG + chr4_1:6286578-6286597 None:intergenic 25.0%
! TCTAATTATTTGCTTATCTC+TGG + chr4_1:6286713-6286732 None:intergenic 25.0%
! AGAGATAAGCAAATAATTAG+AGG - chr4_1:6286712-6286731 Msa0532260:three_prime_UTR 25.0%
! GAGATAAGCAAATAATTAGA+GGG - chr4_1:6286713-6286732 Msa0532260:three_prime_UTR 25.0%
! AGATAAGCAAATAATTAGAG+GGG - chr4_1:6286714-6286733 Msa0532260:three_prime_UTR 25.0%
! AGTTAACCAAGTATACATAA+TGG - chr4_1:6286741-6286760 Msa0532260:three_prime_UTR 25.0%
!! CATTTTCCATTATGTATACT+TGG + chr4_1:6286750-6286769 None:intergenic 25.0%
!! CAAGTATACATAATGGAAAA+TGG - chr4_1:6286748-6286767 Msa0532260:three_prime_UTR 25.0%
! ATTTGAGAAAAAATTTCGCT+TGG + chr4_1:6286827-6286846 None:intergenic 25.0%
! AAGTTGAAAATAAGCTATGA+TGG - chr4_1:6286987-6287006 Msa0532260:intron 25.0%
! TAAAGAAAAAAGCTATGTCA+AGG + chr4_1:6287043-6287062 None:intergenic 25.0%
!!! GACATAGCTTTTTTCTTTAT+TGG - chr4_1:6287044-6287063 Msa0532260:intron 25.0%
!! TTTTATCATCAACAGTTACA+AGG + chr4_1:6287154-6287173 None:intergenic 25.0%
! TATTTGTCAGAACAAAATGT+AGG - chr4_1:6287291-6287310 Msa0532260:three_prime_UTR 25.0%
!! ATGAAACCAAACAATTTTAC+TGG + chr4_1:6287472-6287491 None:intergenic 25.0%
! ATCTTTCAAGAAATTTGAGA+TGG - chr4_1:6287670-6287689 Msa0532260:intron 25.0%
! CAATGGAAACTAAATTTCTT+TGG + chr4_1:6287743-6287762 None:intergenic 25.0%
!! ACAGCAATATCAAATTTTTG+TGG - chr4_1:6287772-6287791 Msa0532260:three_prime_UTR 25.0%
!! CAATATCAAATTTTTGTGGA+AGG - chr4_1:6287776-6287795 Msa0532260:three_prime_UTR 25.0%
!! AAATCAGTTTTCCTATGAAA+AGG - chr4_1:6288113-6288132 Msa0532260:intron 25.0%
!! TGAATCAACATGAAATTTTC+AGG - chr4_1:6288219-6288238 Msa0532260:intron 25.0%
! TAAATATAACTCGTTTGATC+GGG + chr4_1:6288251-6288270 None:intergenic 25.0%
! CTAAATATAACTCGTTTGAT+CGG + chr4_1:6288252-6288271 None:intergenic 25.0%
! ATATCGTAAAAACATTGCAA+AGG - chr4_1:6288296-6288315 Msa0532260:intron 25.0%
!! ACTATTTTACTTACCACTAA+AGG - chr4_1:6288525-6288544 Msa0532260:three_prime_UTR 25.0%
!! ATAATACTAGTTTGTACGAA+AGG + chr4_1:6288742-6288761 None:intergenic 25.0%
! AAAATGTAAGAAGAGAACTT+AGG + chr4_1:6288796-6288815 None:intergenic 25.0%
!!! AGTATTAGCTTTTCAAGATT+AGG + chr4_1:6288905-6288924 None:intergenic 25.0%
! AATTTATCATGAGACCTTTA+TGG + chr4_1:6288976-6288995 None:intergenic 25.0%
!! TTTTACCTTGTTAGTGAAAA+GGG + chr4_1:6289167-6289186 None:intergenic 25.0%
!! TTTTTACCTTGTTAGTGAAA+AGG + chr4_1:6289168-6289187 None:intergenic 25.0%
! CTAACAAGGTAAAAAACAAT+TGG - chr4_1:6289173-6289192 Msa0532260:three_prime_UTR 25.0%
! TTTAAGTGCAAAGAATTCTA+AGG - chr4_1:6289454-6289473 Msa0532260:three_prime_UTR 25.0%
! AAATGATTATGTTATGAGGA+AGG - chr4_1:6289937-6289956 Msa0532260:CDS 25.0%
! AATTTGGATAATTATCACCA+GGG + chr4_1:6290079-6290098 None:intergenic 25.0%
!! TTTGAATTTCTCTTATTTCG+GGG + chr4_1:6290672-6290691 None:intergenic 25.0%
! ACTTAAACAGTATTTGCAAA+TGG - chr4_1:6291089-6291108 Msa0532260:intron 25.0%
! TAATGCTTTCACTTAAAACA+TGG + chr4_1:6291122-6291141 None:intergenic 25.0%
! CATTAAAAATGCAGACAATT+TGG - chr4_1:6291137-6291156 Msa0532260:CDS 25.0%
! AATTCTCAATGAAAGAATCT+TGG + chr4_1:6291470-6291489 None:intergenic 25.0%
!!! AGAATTCTATTTTTGATTGG+TGG - chr4_1:6291484-6291503 Msa0532260:intron 25.0%
!!! TATTTTTGATTGGTGGAATT+TGG - chr4_1:6291491-6291510 Msa0532260:intron 25.0%
!! CGGATTACAATTTAAAACTT+TGG + chr4_1:6291790-6291809 None:intergenic 25.0%
! TTTAAATTGTAATCCGTTAC+TGG - chr4_1:6291794-6291813 Msa0532260:intron 25.0%
! TTAAATTGTAATCCGTTACT+GGG - chr4_1:6291795-6291814 Msa0532260:intron 25.0%
!!! GATTTTAGAACCTAAGTTAA+GGG - chr4_1:6291817-6291836 Msa0532260:intron 25.0%
! CTAGAACATATTCATAGAAA+TGG - chr4_1:6292044-6292063 Msa0532260:intron 25.0%
! ATTAATCCAGCAAAAATTGA+GGG + chr4_1:6292097-6292116 None:intergenic 25.0%
! AATTAATCCAGCAAAAATTG+AGG + chr4_1:6292098-6292117 None:intergenic 25.0%
! GGATTAATTGAAATTCATGT+AGG - chr4_1:6292109-6292128 Msa0532260:intron 25.0%
!! CTTTTCGATAAAATTCATGT+AGG + chr4_1:6292176-6292195 None:intergenic 25.0%
! TTATTCAAGATCATTGTGTA+GGG - chr4_1:6292242-6292261 Msa0532260:intron 25.0%
! AGAGATACAAGCTTATTTAT+AGG + chr4_1:6292279-6292298 None:intergenic 25.0%
! AAAGATTTATAGACAGCTTA+TGG - chr4_1:6292358-6292377 Msa0532260:intron 25.0%
TCAAATGATGTTCTACTACT+AGG - chr4_1:6286583-6286602 Msa0532260:three_prime_UTR 30.0%
CAAATGATGTTCTACTACTA+GGG - chr4_1:6286584-6286603 Msa0532260:three_prime_UTR 30.0%
TTGATAGACAGGTAACAAAA+TGG - chr4_1:6286915-6286934 Msa0532260:intron 30.0%
TGATAGACAGGTAACAAAAT+GGG - chr4_1:6286916-6286935 Msa0532260:intron 30.0%
! TTCTTTTGCACTTGATCATT+GGG + chr4_1:6286969-6286988 None:intergenic 30.0%
TTAAATGATGATATCGAGAG+AGG - chr4_1:6287011-6287030 Msa0532260:intron 30.0%
!!! AGCTTTTTTCTTTATTGGGA+TGG - chr4_1:6287049-6287068 Msa0532260:intron 30.0%
TTTCTTTGGTAAAAATCTGC+AGG + chr4_1:6287729-6287748 None:intergenic 30.0%
! AAAAATTTCACTGAAGGTAC+TGG + chr4_1:6287909-6287928 None:intergenic 30.0%
AACTTAAATGAATTGGGAGA+TGG - chr4_1:6288014-6288033 Msa0532260:intron 30.0%
ACTTAAATGAATTGGGAGAT+GGG - chr4_1:6288015-6288034 Msa0532260:intron 30.0%
! TCCTATGAAAAGGTATGAAA+TGG - chr4_1:6288123-6288142 Msa0532260:intron 30.0%
! ACCATTTCATACCTTTTCAT+AGG + chr4_1:6288127-6288146 None:intergenic 30.0%
GTATGAAATGGTCATGATAA+TGG - chr4_1:6288135-6288154 Msa0532260:intron 30.0%
GTAAAAACATTGCAAAGGAA+AGG - chr4_1:6288301-6288320 Msa0532260:intron 30.0%
! AAAAGTATGGGATGACAAAT+AGG + chr4_1:6288378-6288397 None:intergenic 30.0%
CATACATGGATCATTACATT+CGG - chr4_1:6288417-6288436 Msa0532260:three_prime_UTR 30.0%
CAATTATGACTAACCTTTAG+TGG + chr4_1:6288541-6288560 None:intergenic 30.0%
AAGACAATTAGCAGAAATCA+TGG - chr4_1:6288678-6288697 Msa0532260:three_prime_UTR 30.0%
AGACAATTAGCAGAAATCAT+GGG - chr4_1:6288679-6288698 Msa0532260:three_prime_UTR 30.0%
! TTACATTTTTGTTCTTGCAG+AGG - chr4_1:6288807-6288826 Msa0532260:three_prime_UTR 30.0%
TAGGCATGTTTGAAAAATCT+GGG + chr4_1:6288886-6288905 None:intergenic 30.0%
TTAGGCATGTTTGAAAAATC+TGG + chr4_1:6288887-6288906 None:intergenic 30.0%
TAATACTCAAAGATTGTCCA+AGG - chr4_1:6288918-6288937 Msa0532260:three_prime_UTR 30.0%
ATTGGATATATTTCCTTGTG+TGG - chr4_1:6289191-6289210 Msa0532260:three_prime_UTR 30.0%
AAGTATTTCCTTCGATCATT+CGG - chr4_1:6289234-6289253 Msa0532260:three_prime_UTR 30.0%
AAAGACTAAGAACCTTTCTA+AGG + chr4_1:6289382-6289401 None:intergenic 30.0%
!! TAGAAAGGTTCTTAGTCTTT+TGG - chr4_1:6289382-6289401 Msa0532260:three_prime_UTR 30.0%
! TGCAAAGAATTCTAAGGAAT+TGG - chr4_1:6289460-6289479 Msa0532260:three_prime_UTR 30.0%
TAACAAATATATCGACAGCT+TGG + chr4_1:6289615-6289634 None:intergenic 30.0%
! CACTTAAAGTCTTATAGTTC+TGG - chr4_1:6289688-6289707 Msa0532260:three_prime_UTR 30.0%
CAATTTGGATAATTATCACC+AGG + chr4_1:6290080-6290099 None:intergenic 30.0%
! TAATTGAAGGCTAGTCAATT+TGG + chr4_1:6290095-6290114 None:intergenic 30.0%
AGAAGAACCTTCATAATTGA+AGG + chr4_1:6290108-6290127 None:intergenic 30.0%
TTTATAGTTCCTCAAGTGAA+AGG - chr4_1:6290134-6290153 Msa0532260:intron 30.0%
TTATAGTTCCTCAAGTGAAA+GGG - chr4_1:6290135-6290154 Msa0532260:intron 30.0%
!!! TCGAGATTGTTGTTGTTTTT+GGG - chr4_1:6290350-6290369 Msa0532260:intron 30.0%
! TTGAATTTCTCTTATTTCGG+GGG + chr4_1:6290671-6290690 None:intergenic 30.0%
! AAATTCAAATGATAGCTCTG+TGG - chr4_1:6290683-6290702 Msa0532260:intron 30.0%
TAAAACCTGTAATTCACAGT+CGG + chr4_1:6290874-6290893 None:intergenic 30.0%
AAGAATTCAGTTCAAGTCTT+CGG - chr4_1:6291176-6291195 Msa0532260:CDS 30.0%
!!! CTTTCTTTTAAGATGAGTAC+TGG + chr4_1:6291317-6291336 None:intergenic 30.0%
CAGTACTCATCTTAAAAGAA+AGG - chr4_1:6291315-6291334 Msa0532260:CDS 30.0%
! CTTTTTCTTCAATGTTTAGC+AGG + chr4_1:6291726-6291745 None:intergenic 30.0%
! AAAACTTTGGTGATATGACA+AGG + chr4_1:6291777-6291796 None:intergenic 30.0%
!!! GGATTTTAGAACCTAAGTTA+AGG - chr4_1:6291816-6291835 Msa0532260:intron 30.0%
GATTTCAAAACCCTTAACTT+AGG + chr4_1:6291830-6291849 None:intergenic 30.0%
! TGTTTGGTTTAAGTGAATGT+TGG - chr4_1:6292212-6292231 Msa0532260:intron 30.0%
GTTATTCAAGATCATTGTGT+AGG - chr4_1:6292241-6292260 Msa0532260:intron 30.0%
TATTCAAGATCATTGTGTAG+GGG - chr4_1:6292243-6292262 Msa0532260:intron 30.0%
CTATAAATCTTTCTCAGAGT+TGG + chr4_1:6292350-6292369 None:intergenic 30.0%
GCTAGATATGATTCAACTAC+TGG - chr4_1:6286549-6286568 Msa0532260:three_prime_UTR 35.0%
! ACAATAAAGTTGGTCGCAAA+TGG - chr4_1:6286656-6286675 Msa0532260:three_prime_UTR 35.0%
!! AGTCTCTTGAGCTTTTTAGT+TGG - chr4_1:6286780-6286799 Msa0532260:three_prime_UTR 35.0%
ACAATACTCGACAACATTTC+TGG + chr4_1:6286852-6286871 None:intergenic 35.0%
! AGAAATGTTGTCGAGTATTG+TGG - chr4_1:6286851-6286870 Msa0532260:three_prime_UTR 35.0%
! GAAATGTTGTCGAGTATTGT+GGG - chr4_1:6286852-6286871 Msa0532260:three_prime_UTR 35.0%
! AAATGTTGTCGAGTATTGTG+GGG - chr4_1:6286853-6286872 Msa0532260:three_prime_UTR 35.0%
TACCTGTCTATCAAACAAGT+AGG + chr4_1:6286909-6286928 None:intergenic 35.0%
! AACAAAATGGGAGTGTGTAT+TGG - chr4_1:6286928-6286947 Msa0532260:intron 35.0%
! CTTCTTTTGCACTTGATCAT+TGG + chr4_1:6286970-6286989 None:intergenic 35.0%
! TGTGGTCTTTTTGCAGAAAT+CGG - chr4_1:6287104-6287123 Msa0532260:intron 35.0%
!! CATGATTTGCTACGAGATAT+GGG - chr4_1:6287188-6287207 Msa0532260:intron 35.0%
! GTTTCTTTGGTGATTTCTCA+CGG + chr4_1:6287226-6287245 None:intergenic 35.0%
GTGCTTCCAGTAAAATTGTT+TGG - chr4_1:6287463-6287482 Msa0532260:intron 35.0%
TGTGAAACACTTAGGATATG+AGG + chr4_1:6287513-6287532 None:intergenic 35.0%
TCATATCCTAAGTGTTTCAC+AGG - chr4_1:6287512-6287531 Msa0532260:intron 35.0%
CATATCCTAAGTGTTTCACA+GGG - chr4_1:6287513-6287532 Msa0532260:intron 35.0%
CTTCATGTTCTCAAATGCTT+TGG + chr4_1:6287598-6287617 None:intergenic 35.0%
TCTGCAGGAATGAATGTTAA+AGG + chr4_1:6287714-6287733 None:intergenic 35.0%
!!! ATTGCTGTTTTCTAGCTCAA+TGG + chr4_1:6287760-6287779 None:intergenic 35.0%
GCACTAAAACATTGGATAAG+AGG + chr4_1:6288084-6288103 None:intergenic 35.0%
CTCATTAGAATGCTCATACA+TGG - chr4_1:6288403-6288422 Msa0532260:three_prime_UTR 35.0%
TGTAAGAAGAGAACTTAGGT+AGG + chr4_1:6288792-6288811 None:intergenic 35.0%
AGGCATGTTTGAAAAATCTG+GGG + chr4_1:6288885-6288904 None:intergenic 35.0%
TTCAACGTATACATGGTTCT+TGG + chr4_1:6289028-6289047 None:intergenic 35.0%
CAGAGATTTCAACGTATACA+TGG + chr4_1:6289035-6289054 None:intergenic 35.0%
! CTCTGAGAACTCTTATTCTA+TGG - chr4_1:6289050-6289069 Msa0532260:three_prime_UTR 35.0%
TAACAAATTGGAAGAGGACT+TGG - chr4_1:6289085-6289104 Msa0532260:three_prime_UTR 35.0%
ATTTCCTTGTGTGGCTATAA+AGG - chr4_1:6289200-6289219 Msa0532260:three_prime_UTR 35.0%
AAATCCTTTATAGCCACACA+AGG + chr4_1:6289207-6289226 None:intergenic 35.0%
! ACTTTCACGAGATGCAATTT+TGG - chr4_1:6289427-6289446 Msa0532260:three_prime_UTR 35.0%
CAGAAACTAAAAAATCCCTG+AGG - chr4_1:6289560-6289579 Msa0532260:three_prime_UTR 35.0%
AGGTCTCTTCTAATTCGAAT+GGG - chr4_1:6289580-6289599 Msa0532260:three_prime_UTR 35.0%
TAGTACCCAAAGAAATGAAG+TGG + chr4_1:6289811-6289830 None:intergenic 35.0%
CTTCATTTCTTTGGGTACTA+CGG - chr4_1:6289811-6289830 Msa0532260:exon 35.0%
! CAATTTTGAGCCTACTTTCA+CGG - chr4_1:6290011-6290030 Msa0532260:CDS 35.0%
ATTCTGTAAACCGTGAAAGT+AGG + chr4_1:6290024-6290043 None:intergenic 35.0%
AATACGATTGTCAAGTCATG+TGG - chr4_1:6290041-6290060 Msa0532260:CDS 35.0%
!! TGACTAGCCTTCAATTATGA+AGG - chr4_1:6290098-6290117 Msa0532260:intron 35.0%
GCAGATAACATAACATCAGA+TGG - chr4_1:6290200-6290219 Msa0532260:intron 35.0%
! AGATGGACTCAAAAATGTGT+TGG - chr4_1:6290217-6290236 Msa0532260:intron 35.0%
GCAGAGAGTAGTATCAAATA+TGG - chr4_1:6290312-6290331 Msa0532260:intron 35.0%
GTAGTATCAAATATGGAACC+TGG - chr4_1:6290319-6290338 Msa0532260:intron 35.0%
!!! GTCGAGATTGTTGTTGTTTT+TGG - chr4_1:6290349-6290368 Msa0532260:intron 35.0%
CTCATATATGATGAACCAGT+TGG - chr4_1:6290406-6290425 Msa0532260:intron 35.0%
CCAACAAGAACATTCTTATC+TGG + chr4_1:6290457-6290476 None:intergenic 35.0%
CCAGATAAGAATGTTCTTGT+TGG - chr4_1:6290454-6290473 Msa0532260:intron 35.0%
! AAGAATGTTCTTGTTGGTGA+TGG - chr4_1:6290460-6290479 Msa0532260:intron 35.0%
AAAGACGTGATATAATTGCC+AGG - chr4_1:6290582-6290601 Msa0532260:intron 35.0%
! ATTTGAGTTAATCGCCAGTT+TGG - chr4_1:6290614-6290633 Msa0532260:intron 35.0%
AGCACAAATACAAGGTTTAC+AGG + chr4_1:6290819-6290838 None:intergenic 35.0%
!! AGGTTTTATGCGTATACTCA+TGG - chr4_1:6290886-6290905 Msa0532260:intron 35.0%
! TTTTATGCGTATACTCATGG+TGG - chr4_1:6290889-6290908 Msa0532260:intron 35.0%
TGATTAATCATCACGTATCC+TGG + chr4_1:6291053-6291072 None:intergenic 35.0%
!!! TTGGTTTTGCTGTATTGTGT+AGG - chr4_1:6291510-6291529 Msa0532260:intron 35.0%
AGGTTCCAAAACTGTTTAAG+AGG - chr4_1:6291530-6291549 Msa0532260:intron 35.0%
!! AGGTTCTAAAATCCCAGTAA+CGG + chr4_1:6291810-6291829 None:intergenic 35.0%
CAAAAATTGAGGGTTGGAAT+GGG + chr4_1:6292087-6292106 None:intergenic 35.0%
ACAAGCTTATTTATAGGAGC+AGG + chr4_1:6292273-6292292 None:intergenic 35.0%
GGTACTACAGAAAAATCACT+TGG + chr4_1:6292412-6292431 None:intergenic 35.0%
ATGTTCTACTACTAGGGATG+TGG - chr4_1:6286590-6286609 Msa0532260:three_prime_UTR 40.0%
TGTTCTACTACTAGGGATGT+GGG - chr4_1:6286591-6286610 Msa0532260:three_prime_UTR 40.0%
! AAAGTTGGTCGCAAATGGTT+TGG - chr4_1:6286661-6286680 Msa0532260:three_prime_UTR 40.0%
! AATGTTGTCGAGTATTGTGG+GGG - chr4_1:6286854-6286873 Msa0532260:three_prime_UTR 40.0%
TATCAAACAAGTAGGACCCA+AGG + chr4_1:6286901-6286920 None:intergenic 40.0%
GTCCTACTTGTTTGATAGAC+AGG - chr4_1:6286904-6286923 Msa0532260:intron 40.0%
GATGGACCGAAATGATGTTA+TGG - chr4_1:6287067-6287086 Msa0532260:intron 40.0%
!! GCATGATTTGCTACGAGATA+TGG - chr4_1:6287187-6287206 Msa0532260:intron 40.0%
TAGCAGGTTATGGTTTCATG+AGG - chr4_1:6287256-6287275 Msa0532260:intron 40.0%
!!! TGAGGGACTAGTTTTGAAGT+TGG - chr4_1:6287548-6287567 Msa0532260:intron 40.0%
! GAAATTTGAGATGGCTGTGT+TGG - chr4_1:6287679-6287698 Msa0532260:intron 40.0%
! ATTTTTGTGGAAGGAGATGC+AGG - chr4_1:6287785-6287804 Msa0532260:three_prime_UTR 40.0%
!! AGGTACTGGCAGAATTAGAA+AGG + chr4_1:6287895-6287914 None:intergenic 40.0%
TACATTCGGAAATGTAGCCT+TGG - chr4_1:6288431-6288450 Msa0532260:three_prime_UTR 40.0%
CTTTCAAAACCATCCAACCA+AGG + chr4_1:6288451-6288470 None:intergenic 40.0%
! ATTTTTGTTCTTGCAGAGGC+TGG - chr4_1:6288811-6288830 Msa0532260:three_prime_UTR 40.0%
TACATGGTTCTTGGAAGGTT+AGG + chr4_1:6289019-6289038 None:intergenic 40.0%
ACGTATACATGGTTCTTGGA+AGG + chr4_1:6289024-6289043 None:intergenic 40.0%
AGTGTCATCTGCAATCAAAG+TGG + chr4_1:6289129-6289148 None:intergenic 40.0%
! AAGTGCCCTTTTCACTAACA+AGG - chr4_1:6289159-6289178 Msa0532260:three_prime_UTR 40.0%
GGAAATAGATGACAGACAGT+GGG + chr4_1:6289354-6289373 None:intergenic 40.0%
TATTTCCGAGGTCCTTAGAA+AGG - chr4_1:6289367-6289386 Msa0532260:three_prime_UTR 40.0%
! AAGAACCTTTCTAAGGACCT+CGG + chr4_1:6289375-6289394 None:intergenic 40.0%
!! CTTAGTCTTTTGGTAGAGTG+CGG - chr4_1:6289392-6289411 Msa0532260:three_prime_UTR 40.0%
TCGAATTAGAAGAGACCTCA+GGG + chr4_1:6289578-6289597 None:intergenic 40.0%
TTCGAATTAGAAGAGACCTC+AGG + chr4_1:6289579-6289598 None:intergenic 40.0%
GAGGTCTCTTCTAATTCGAA+TGG - chr4_1:6289579-6289598 Msa0532260:three_prime_UTR 40.0%
CTCGGCTCTTCACATATAAT+TGG + chr4_1:6289737-6289756 None:intergenic 40.0%
CTACTACACCACAATACACT+CGG + chr4_1:6289755-6289774 None:intergenic 40.0%
GTGTATTGTGGTGTAGTAGT+TGG - chr4_1:6289756-6289775 Msa0532260:three_prime_UTR 40.0%
ACTGGACCACTTCATTTCTT+TGG - chr4_1:6289802-6289821 Msa0532260:three_prime_UTR 40.0%
CTGGACCACTTCATTTCTTT+GGG - chr4_1:6289803-6289822 Msa0532260:three_prime_UTR 40.0%
AAGTTATGCCCTTTCACTTG+AGG + chr4_1:6290146-6290165 None:intergenic 40.0%
CATTCAGCTCTATAAGAGAG+AGG - chr4_1:6290261-6290280 Msa0532260:intron 40.0%
TGAACCAGTTGGCGAAAATT+TGG - chr4_1:6290417-6290436 Msa0532260:intron 40.0%
GAACCAGTTGGCGAAAATTT+GGG - chr4_1:6290418-6290437 Msa0532260:intron 40.0%
AACCAGTTGGCGAAAATTTG+GGG - chr4_1:6290419-6290438 Msa0532260:intron 40.0%
AAAATGAATGTCCTGCCAAG+AGG - chr4_1:6290488-6290507 Msa0532260:intron 40.0%
TACTTGAAGAGTGATCCTCT+TGG + chr4_1:6290506-6290525 None:intergenic 40.0%
CAACTAGCAGCACAAATACA+AGG + chr4_1:6290827-6290846 None:intergenic 40.0%
! TGTATTTGTGCTGCTAGTTG+TGG - chr4_1:6290827-6290846 Msa0532260:intron 40.0%
AGTTTCCGACTGTGAATTAC+AGG - chr4_1:6290866-6290885 Msa0532260:intron 40.0%
! TCCTTAGAGCATTAGGATCA+GGG + chr4_1:6291014-6291033 None:intergenic 40.0%
! CTTACTCTCCTTAGAGCATT+AGG + chr4_1:6291021-6291040 None:intergenic 40.0%
!! GCTCTAAGGAGAGTAAGATA+AGG - chr4_1:6291024-6291043 Msa0532260:intron 40.0%
! AGGGACCTCTTAAACAGTTT+TGG + chr4_1:6291538-6291557 None:intergenic 40.0%
ACCTAAACAGTCAAAACCTG+CGG + chr4_1:6291633-6291652 None:intergenic 40.0%
! TTGGTGATATGACAAGGATC+TGG + chr4_1:6291771-6291790 None:intergenic 40.0%
GCAAAAATTGAGGGTTGGAA+TGG + chr4_1:6292088-6292107 None:intergenic 40.0%
! TTCCAACCCTCAATTTTTGC+TGG - chr4_1:6292088-6292107 Msa0532260:intron 40.0%
ATCCAGCAAAAATTGAGGGT+TGG + chr4_1:6292093-6292112 None:intergenic 40.0%
CATGTAGGTTTCAGCACTTT+CGG - chr4_1:6292124-6292143 Msa0532260:intron 40.0%
AGGTCGCAACAATTTGAGAA+TGG + chr4_1:6292156-6292175 None:intergenic 40.0%
TTGGATGAGAAACACTCAGA+GGG + chr4_1:6292331-6292350 None:intergenic 40.0%
ACTCGAGATTCGACTCTAAC+TGG + chr4_1:6286529-6286548 None:intergenic 45.0%
GTTCTACTACTAGGGATGTG+GGG - chr4_1:6286592-6286611 Msa0532260:three_prime_UTR 45.0%
!! GTCGCAAATGGTTTGGTTCA+GGG - chr4_1:6286668-6286687 Msa0532260:three_prime_UTR 45.0%
TTACAAGGCTTCGCTCAACA+AGG + chr4_1:6287139-6287158 None:intergenic 45.0%
CTACGCTTCTCGAGTTTCTT+TGG + chr4_1:6287239-6287258 None:intergenic 45.0%
CTCAGATTGCTTCATCTTGC+TGG - chr4_1:6287621-6287640 Msa0532260:intron 45.0%
CTTGCTGGTGTACAACTTGA+TGG - chr4_1:6287636-6287655 Msa0532260:intron 45.0%
TTGAGATGGCTGTGTTGGAA+CGG - chr4_1:6287684-6287703 Msa0532260:intron 45.0%
! TTCGGAAATGTAGCCTTGGT+TGG - chr4_1:6288435-6288454 Msa0532260:three_prime_UTR 45.0%
! GAAATGTAGCCTTGGTTGGA+TGG - chr4_1:6288439-6288458 Msa0532260:three_prime_UTR 45.0%
CGTTGTATCGTGTGTTTCGT+GGG + chr4_1:6288610-6288629 None:intergenic 45.0%
ATGGAGATGTCCAGTGGTAT+GGG + chr4_1:6288957-6288976 None:intergenic 45.0%
TATGGAGATGTCCAGTGGTA+TGG + chr4_1:6288958-6288977 None:intergenic 45.0%
ACCACTGGACATCTCCATAA+AGG - chr4_1:6288959-6288978 Msa0532260:three_prime_UTR 45.0%
ACCTTTATGGAGATGTCCAG+TGG + chr4_1:6288963-6288982 None:intergenic 45.0%
TGGTTCTTGGAAGGTTAGGA+AGG + chr4_1:6289015-6289034 None:intergenic 45.0%
GGAAGAGGACTTGGAACAAA+TGG - chr4_1:6289094-6289113 Msa0532260:three_prime_UTR 45.0%
TTCCTTCGATCATTCGGTCT+TGG - chr4_1:6289240-6289259 Msa0532260:three_prime_UTR 45.0%
ATCCAAGACCGAATGATCGA+AGG + chr4_1:6289245-6289264 None:intergenic 45.0%
TCCTTAGTTCAAACACCTGC+TGG - chr4_1:6289287-6289306 Msa0532260:three_prime_UTR 45.0%
ATAAGAGATGACATGCCAGC+AGG + chr4_1:6289305-6289324 None:intergenic 45.0%
CAGTGGGAACTACTTCTTGA+TGG + chr4_1:6289338-6289357 None:intergenic 45.0%
CGGAAATAGATGACAGACAG+TGG + chr4_1:6289355-6289374 None:intergenic 45.0%
CTGTCTGTCATCTATTTCCG+AGG - chr4_1:6289355-6289374 Msa0532260:three_prime_UTR 45.0%
ACGATTGTCAAGTCATGTGG+TGG - chr4_1:6290044-6290063 Msa0532260:CDS 45.0%
! GTTCGCCACCTTTGAAAATG+AGG - chr4_1:6290285-6290304 Msa0532260:intron 45.0%
! CCACTCCTCATTTTCAAAGG+TGG + chr4_1:6290293-6290312 None:intergenic 45.0%
! CCACCTTTGAAAATGAGGAG+TGG - chr4_1:6290290-6290309 Msa0532260:intron 45.0%
! CTGCCACTCCTCATTTTCAA+AGG + chr4_1:6290296-6290315 None:intergenic 45.0%
ACAATCTCGACTTTGTCACC+AGG + chr4_1:6290340-6290359 None:intergenic 45.0%
GATCACTCTTCAAGTAGAGC+TGG - chr4_1:6290510-6290529 Msa0532260:intron 45.0%
GGAAAATTGCAGGACCAAAC+TGG + chr4_1:6290631-6290650 None:intergenic 45.0%
TAACAGCGCAGGAAAATTGC+AGG + chr4_1:6290641-6290660 None:intergenic 45.0%
CCACATGCTTCAGCAATAAG+AGG + chr4_1:6290923-6290942 None:intergenic 45.0%
CCTCTTATTGCTGAAGCATG+TGG - chr4_1:6290920-6290939 Msa0532260:intron 45.0%
! CTCCTTAGAGCATTAGGATC+AGG + chr4_1:6291015-6291034 None:intergenic 45.0%
GAGAGTAAGATAAGGAAGCC+AGG - chr4_1:6291032-6291051 Msa0532260:intron 45.0%
TCGTGAGTAAATGCAGCAGA+GGG + chr4_1:6291211-6291230 None:intergenic 45.0%
TTCGTGAGTAAATGCAGCAG+AGG + chr4_1:6291212-6291231 None:intergenic 45.0%
GCTTGTATCCTCGACATCAA+GGG + chr4_1:6291557-6291576 None:intergenic 45.0%
TGCTTGTATCCTCGACATCA+AGG + chr4_1:6291558-6291577 None:intergenic 45.0%
AAACAGTCAAAACCTGCGGT+CGG + chr4_1:6291629-6291648 None:intergenic 45.0%
!!! ACCGCAGGTTTTGACTGTTT+AGG - chr4_1:6291629-6291648 Msa0532260:intron 45.0%
TGTTCTAGCACATGTCCAAC+AGG + chr4_1:6292032-6292051 None:intergenic 45.0%
TAGGTTTCAGCACTTTCGGT+GGG - chr4_1:6292128-6292147 Msa0532260:intron 45.0%
AACACTCAGAGGGGTCATTA+CGG + chr4_1:6292321-6292340 None:intergenic 45.0%
TGGATGAGAAACACTCAGAG+GGG + chr4_1:6292330-6292349 None:intergenic 45.0%
GTTGGATGAGAAACACTCAG+AGG + chr4_1:6292332-6292351 None:intergenic 45.0%
!!! TTTTTTATTTTAAAATTTAG+TGG + chr4_1:6287979-6287998 None:intergenic 5.0%
ACTACTAGGGATGTGGGGTA+TGG - chr4_1:6286597-6286616 Msa0532260:three_prime_UTR 50.0%
CTACTAGGGATGTGGGGTAT+GGG - chr4_1:6286598-6286617 Msa0532260:three_prime_UTR 50.0%
!! GGTCGCAAATGGTTTGGTTC+AGG - chr4_1:6286667-6286686 Msa0532260:three_prime_UTR 50.0%
! AGAAACTCGAGAAGCGTAGC+AGG - chr4_1:6287240-6287259 Msa0532260:intron 50.0%
! TCGAGAAGCGTAGCAGGTTA+TGG - chr4_1:6287246-6287265 Msa0532260:intron 50.0%
GTGCACCCTGTGAAACACTT+AGG + chr4_1:6287521-6287540 None:intergenic 50.0%
GCGTTGTATCGTGTGTTTCG+TGG + chr4_1:6288611-6288630 None:intergenic 50.0%
AGATTGTCCAAGGCTGTCTG+AGG - chr4_1:6288928-6288947 Msa0532260:three_prime_UTR 50.0%
! TCTGAGGTTTCCCATACCAC+TGG - chr4_1:6288944-6288963 Msa0532260:three_prime_UTR 50.0%
GCCAGCAGGTGTTTGAACTA+AGG + chr4_1:6289291-6289310 None:intergenic 50.0%
GTGAAGAGCCGAGTGTATTG+TGG - chr4_1:6289744-6289763 Msa0532260:three_prime_UTR 50.0%
AACGACTCTGCTGCAATGGA+TGG + chr4_1:6289847-6289866 None:intergenic 50.0%
CTGAAACGACTCTGCTGCAA+TGG + chr4_1:6289851-6289870 None:intergenic 50.0%
CATTGCAGCAGAGTCGTTTC+AGG - chr4_1:6289849-6289868 Msa0532260:CDS 50.0%
! TGCCCCAAATTTTCGCCAAC+TGG + chr4_1:6290424-6290443 None:intergenic 50.0%
TGAAGAGTGATCCTCTTGGC+AGG + chr4_1:6290502-6290521 None:intergenic 50.0%
GGGGATTAACTTAACAGCGC+AGG + chr4_1:6290652-6290671 None:intergenic 50.0%
GGTGCCTAGGAAAGTCAAGT+TGG - chr4_1:6290941-6290960 Msa0532260:intron 50.0%
CACGCCAACTTGACTTTCCT+AGG + chr4_1:6290948-6290967 None:intergenic 50.0%
!! CTAGGAAAGTCAAGTTGGCG+TGG - chr4_1:6290946-6290965 Msa0532260:intron 50.0%
!! AGTCAAGTTGGCGTGGATCT+TGG - chr4_1:6290953-6290972 Msa0532260:intron 50.0%
ACGTCCAACGTGAGCTTGAT+TGG - chr4_1:6290984-6291003 Msa0532260:intron 50.0%
CGTCCAACGTGAGCTTGATT+GGG - chr4_1:6290985-6291004 Msa0532260:intron 50.0%
CTTCCCAATCAAGCTCACGT+TGG + chr4_1:6290991-6291010 None:intergenic 50.0%
GCCCTGATCCTAATGCTCTA+AGG - chr4_1:6291010-6291029 Msa0532260:intron 50.0%
TAAGAGGTCCCTTGATGTCG+AGG - chr4_1:6291546-6291565 Msa0532260:intron 50.0%
AACTTCTTCCCTACTGCAGC+TGG - chr4_1:6291593-6291612 Msa0532260:intron 50.0%
AATCCAGACCAGCTGCAGTA+GGG + chr4_1:6291604-6291623 None:intergenic 50.0%
AAATCCAGACCAGCTGCAGT+AGG + chr4_1:6291605-6291624 None:intergenic 50.0%
TCTGTGACAGAGACACCTGT+TGG - chr4_1:6292014-6292033 Msa0532260:intron 50.0%
GTAGGTTTCAGCACTTTCGG+TGG - chr4_1:6292127-6292146 Msa0532260:intron 50.0%
TAGATGTTCGACGAGTGACG+TGG + chr4_1:6292433-6292452 None:intergenic 50.0%
CACTCGTCGAACATCTAGAG+TGG - chr4_1:6292436-6292455 Msa0532260:CDS 50.0%
! ATGTGGGGTATGGGAGGCAT+TGG - chr4_1:6286607-6286626 Msa0532260:three_prime_UTR 55.0%
ACAGGGTGCACAAGCTGTTG+AGG - chr4_1:6287530-6287549 Msa0532260:intron 55.0%
CAGGGTGCACAAGCTGTTGA+GGG - chr4_1:6287531-6287550 Msa0532260:intron 55.0%
TGGGAAACCTCAGACAGCCT+TGG + chr4_1:6288938-6288957 None:intergenic 55.0%
GGCACTTCTAGTCCCCTTCT+CGG - chr4_1:6289777-6289796 Msa0532260:three_prime_UTR 55.0%
AGTGGTCCAGTAGCCGAGAA+GGG + chr4_1:6289793-6289812 None:intergenic 55.0%
AAGTGGTCCAGTAGCCGAGA+AGG + chr4_1:6289794-6289813 None:intergenic 55.0%
TGCTGCAATGGATGGCAGAG+GGG + chr4_1:6289839-6289858 None:intergenic 55.0%
CTGCTGCAATGGATGGCAGA+GGG + chr4_1:6289840-6289859 None:intergenic 55.0%
TCTGCTGCAATGGATGGCAG+AGG + chr4_1:6289841-6289860 None:intergenic 55.0%
TGCAGCAGAGTCGTTTCAGG+AGG - chr4_1:6289852-6289871 Msa0532260:CDS 55.0%
GCAGCAGAGTCGTTTCAGGA+GGG - chr4_1:6289853-6289872 Msa0532260:CDS 55.0%
CAGCAGAGTCGTTTCAGGAG+GGG - chr4_1:6289854-6289873 Msa0532260:CDS 55.0%
AGCAGAGTCGTTTCAGGAGG+GGG - chr4_1:6289855-6289874 Msa0532260:CDS 55.0%
TGCTGAAGCATGTGGTGCCT+AGG - chr4_1:6290928-6290947 Msa0532260:intron 55.0%
CTAGGGATGTGGGGTATGGG+AGG - chr4_1:6286601-6286620 Msa0532260:three_prime_UTR 60.0%
CCAAGGACTTCCAGAGCCAG+CGG + chr4_1:6286884-6286903 None:intergenic 60.0%
!! CGCTGGCTCTGGAAGTCCTT+GGG - chr4_1:6286882-6286901 Msa0532260:three_prime_UTR 60.0%
CTAGTCCCCTTCTCGGCTAC+TGG - chr4_1:6289784-6289803 Msa0532260:three_prime_UTR 60.0%
GTGGTCCAGTAGCCGAGAAG+GGG + chr4_1:6289792-6289811 None:intergenic 60.0%
GCTGCAATGGATGGCAGAGG+GGG + chr4_1:6289838-6289857 None:intergenic 60.0%
GCAGAGTCGTTTCAGGAGGG+GGG - chr4_1:6289856-6289875 Msa0532260:CDS 60.0%
CAGAGTCGTTTCAGGAGGGG+GGG - chr4_1:6289857-6289876 Msa0532260:CDS 60.0%
TGTGGTGGTTTCTCGCTCCC+TGG - chr4_1:6290059-6290078 Msa0532260:CDS 60.0%
CTTCCCTACTGCAGCTGGTC+TGG - chr4_1:6291598-6291617 Msa0532260:intron 60.0%
GTATTGTGGGGGACTGCCGC+TGG - chr4_1:6286865-6286884 Msa0532260:three_prime_UTR 65.0%
!! CCGCTGGCTCTGGAAGTCCT+TGG - chr4_1:6286881-6286900 Msa0532260:three_prime_UTR 65.0%
GGTCTGGATTTGCCGACCGC+AGG - chr4_1:6291614-6291633 Msa0532260:intron 65.0%
!! TGGGGGACTGCCGCTGGCTC+TGG - chr4_1:6286871-6286890 Msa0532260:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 6286445 6292468 6286445 ID=Msa0532260;Name=Msa0532260
chr4_1 mRNA 6286445 6292468 6286445 ID=Msa0532260-mRNA-1;Parent=Msa0532260;Name=Msa0532260-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0.8|0.66|1|0.4|0|6|2416|200
chr4_1 exon 6286445 6286915 6286445 ID=Msa0532260-mRNA-1:exon:2280;Parent=Msa0532260-mRNA-1
chr4_1 exon 6287263 6287381 6287263 ID=Msa0532260-mRNA-1:exon:2279;Parent=Msa0532260-mRNA-1
chr4_1 exon 6287716 6288025 6287716 ID=Msa0532260-mRNA-1:exon:2278;Parent=Msa0532260-mRNA-1
chr4_1 exon 6288310 6290086 6288310 ID=Msa0532260-mRNA-1:exon:2277;Parent=Msa0532260-mRNA-1
chr4_1 exon 6291107 6291346 6291107 ID=Msa0532260-mRNA-1:exon:2276;Parent=Msa0532260-mRNA-1
chr4_1 exon 6292367 6292468 6292367 ID=Msa0532260-mRNA-1:exon:2275;Parent=Msa0532260-mRNA-1
chr4_1 CDS 6292367 6292468 6292367 ID=Msa0532260-mRNA-1:cds;Parent=Msa0532260-mRNA-1
chr4_1 CDS 6291107 6291346 6291107 ID=Msa0532260-mRNA-1:cds;Parent=Msa0532260-mRNA-1
chr4_1 CDS 6289826 6290086 6289826 ID=Msa0532260-mRNA-1:cds;Parent=Msa0532260-mRNA-1
chr4_1 three_prime_UTR 6288310 6289825 6288310 ID=Msa0532260-mRNA-1:three_prime_utr;Parent=Msa0532260-mRNA-1
chr4_1 three_prime_UTR 6287716 6288025 6287716 ID=Msa0532260-mRNA-1:three_prime_utr;Parent=Msa0532260-mRNA-1
chr4_1 three_prime_UTR 6287263 6287381 6287263 ID=Msa0532260-mRNA-1:three_prime_utr;Parent=Msa0532260-mRNA-1
chr4_1 three_prime_UTR 6286445 6286915 6286445 ID=Msa0532260-mRNA-1:three_prime_utr;Parent=Msa0532260-mRNA-1
Gene Sequence

>Msa0532260

AATGAAAGTGAGGATATCAAGGATATTGTTGAAAAAGTTACACATTTGCTTGACAAGACAGACTTGTTCATTGCTGATCATCCAGTTAGAGTCGAATCTCGATTGGCAGCTAATGCAAAATGTTTTAGTACCAAAGCATTTGAGAACATGAAGAAACTCAGATTGCTTCATCTTGCTGGTGTACAACTTGATGGAGATTTTAAATATCTTTCAAGAAATTTGAGATGGCTGTGTTGGAACGGATTTCCTTTAACATTCATTCCTGCAGATTTTTACCAAAGAAATTTAGTTTCCATTGAGCTAGAAAACAGCAATATCAAATTTTTGTGGAAGGAGATGCAGAGGCTGGAGAATCTAAAATTTCTCAATCTTAGTCATTCTCATTGTTTAGTACAGACCCCAGATTTTTCAAACATGCCTAATCTTGAAAAGCTAATACTCAAAGATTGTCCAAGGCTGTCTGAGGTTTCCCATACCACTGGACATCTCCATAAAGGTCTCATGATAAATTTGAAAGACTGTATTAGCCTTCCTAACCTTCCAAGAACCATGTATACGTTGAAATCTCTGAGAACTCTTATTCTATGGCTGTTTAATTATTAA
Protein sequence

>Msa0532260

NESEDIKDIVEKVTHLLDKTDLFIADHPVRVESRLAANAKCFSTKAFENMKKLRLLHLAGVQLDGDFKYLSRNLRWLCWNGFPLTFIPADFYQRNLVSIELENSNIKFLWKEMQRLENLKFLNLSHSHCLVQTPDFSNMPNLEKLILKDCPRLSEVSHTTGHLHKGLMINLKDCISLPNLPRTMYTLKSLRTLILWLFNY*