Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797990 | sp|Q8CFC7|CLASR_MOUSE | 33.813 | 139 | 84 | 1 | 1 | 131 | 1 | 139 | 1.84e-16 | 86.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797990 | G7K6P7 | 95.439 | 592 | 19 | 1 | 1 | 584 | 1 | 592 | 0.0 | 1135 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0667100 | Msa0797990 | 0.824981 | 6.012110e-54 | -8.615850e-47 |
| Msa0715020 | Msa0797990 | 0.811658 | 6.270167e-51 | -8.615850e-47 |
| Msa0756990 | Msa0797990 | 0.859557 | 3.809922e-63 | -8.615850e-47 |
| Msa0797990 | Msa0806900 | 0.837418 | 5.259657e-57 | -8.615850e-47 |
| Msa0797990 | Msa0836610 | 0.879795 | 9.307548e-70 | -8.615850e-47 |
| Msa0797990 | Msa0966650 | 0.800571 | 1.353827e-48 | -8.615850e-47 |
| Msa0797990 | Msa1068790 | 0.801845 | 7.430763e-49 | -8.615850e-47 |
| Msa0174110 | Msa0797990 | 0.801822 | 7.510840e-49 | -8.615850e-47 |
| Msa0532260 | Msa0797990 | 0.814456 | 1.526918e-51 | -8.615850e-47 |
| Msa0537300 | Msa0797990 | 0.800895 | 1.162826e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797990 | MtrunA17_Chr5g0402261 | 96.175 | 549 | 13 | 1 | 1 | 541 | 1 | 549 | 0.0 | 1047 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797990 | AT4G36980.2 | 68.958 | 480 | 129 | 7 | 1 | 466 | 1 | 474 | 1.92e-179 | 517 |
| Msa0797990 | AT4G36980.1 | 68.958 | 480 | 129 | 7 | 1 | 466 | 1 | 474 | 6.62e-179 | 517 |
| Msa0797990 | AT4G36980.4 | 68.958 | 480 | 129 | 7 | 1 | 466 | 1 | 474 | 6.85e-179 | 517 |
| Msa0797990 | AT4G36980.3 | 68.958 | 480 | 128 | 8 | 1 | 466 | 1 | 473 | 7.41e-177 | 512 |
Find 154 sgRNAs with CRISPR-Local
Find 459 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAGAATACATAACTGAATT+TGG | 0.161027 | 5_3:-10449332 | Msa0797990:CDS |
| ATTCAGAAAGTTGACATTTC+AGG | 0.223226 | 5_3:-10447306 | Msa0797990:intron |
| GAGATAATTGCAAAAGAATA+TGG | 0.223621 | 5_3:-10450046 | Msa0797990:CDS |
| AAGTTAAAGGCAAGTGGTTC+TGG | 0.286261 | 5_3:-10448068 | Msa0797990:CDS |
| CAAGTTCTCGCTCCCGTTCT+CGG | 0.286578 | 5_3:-10447482 | Msa0797990:CDS |
| GACCGAGAACGGGTGCGATT+AGG | 0.288278 | 5_3:+10447456 | None:intergenic |
| CTCAGCACTAGCAAAGTTAA+AGG | 0.294524 | 5_3:-10448081 | Msa0797990:CDS |
| ACCGAGAACGGGTGCGATTA+GGG | 0.296244 | 5_3:+10447457 | None:intergenic |
| TAGAATACATAACTGAATTT+GGG | 0.302082 | 5_3:-10449331 | Msa0797990:CDS |
| AACTATCGAAATCAAAATTA+GGG | 0.306989 | 5_3:-10453185 | Msa0797990:intron |
| CTGGAACCCCTGCTTCTACT+TGG | 0.316573 | 5_3:+10447516 | None:intergenic |
| CCCCTAATCGCACCCGTTCT+CGG | 0.323479 | 5_3:-10447458 | Msa0797990:CDS |
| ACATTTCCACTTACAATTGC+AGG | 0.337629 | 5_3:+10449938 | None:intergenic |
| AATATCTTGTTTCCCATTCC+AGG | 0.340245 | 5_3:+10451723 | None:intergenic |
| CACCTGGGAGAACGAGAATA+AGG | 0.360202 | 5_3:+10447396 | None:intergenic |
| CACCCCAAGAGAGACTTAAA+AGG | 0.365422 | 5_3:-10448007 | Msa0797990:CDS |
| TTGCATGTCGATCCTGCTTC+TGG | 0.366742 | 5_3:-10448931 | Msa0797990:CDS |
| CAAAATCAATCTCAATTGTC+AGG | 0.371934 | 5_3:-10453253 | Msa0797990:five_prime_UTR |
| TGATGTAGCACACGAGTTCC+AGG | 0.390478 | 5_3:+10449750 | None:intergenic |
| GGTGTTTCTTTCTTCTCCCC+TGG | 0.396918 | 5_3:+10448026 | None:intergenic |
| ATTGCTCCCAAGTGGTTAGA+AGG | 0.397816 | 5_3:-10447205 | Msa0797990:CDS |
| AAGCTTATTCTCGTTCTAGA+AGG | 0.405006 | 5_3:-10449559 | Msa0797990:intron |
| TAGGAGTCTTTGGTTTGCTT+CGG | 0.406206 | 5_3:+10449357 | None:intergenic |
| GCGATTAGGGGACCGAGAAC+GGG | 0.414338 | 5_3:+10447470 | None:intergenic |
| TCTTTCTTCTCCCCTGGTTG+AGG | 0.418033 | 5_3:+10448032 | None:intergenic |
| CTGTATTGCAGGTCATCATC+TGG | 0.420609 | 5_3:-10448970 | Msa0797990:intron |
| GGGAAATTCATTCATTCATC+GGG | 0.421739 | 5_3:-10453232 | Msa0797990:five_prime_UTR |
| GTATGGTTGGCTTGTTTACA+TGG | 0.422177 | 5_3:-10450014 | Msa0797990:CDS |
| TCCTCAGGATACCCTGGAAT+GGG | 0.422424 | 5_3:-10451735 | Msa0797990:intron |
| TAACAATCCTTGTTGATCTT+CGG | 0.423578 | 5_3:+10452935 | None:intergenic |
| TGGGTGATGGTATACCTTAC+GGG | 0.429124 | 5_3:+10448871 | None:intergenic |
| ACAAGCCAAGAAAAGAGAAC+AGG | 0.429228 | 5_3:-10447848 | Msa0797990:CDS |
| TGCAAATGGAGCAGCAGCCT+TGG | 0.433833 | 5_3:+10451189 | None:intergenic |
| AACCTGTGAGTAAGATCCTT+TGG | 0.435314 | 5_3:+10450192 | None:intergenic |
| GCGAGAAGGGGACCGAGAAC+GGG | 0.441052 | 5_3:+10447446 | None:intergenic |
| CAAAAGAATATGGGGTCAAA+AGG | 0.442771 | 5_3:-10450036 | Msa0797990:CDS |
| CCCAACCTGTCTGATGCAAA+TGG | 0.449975 | 5_3:+10451175 | None:intergenic |
| TGTGATTTGCGAGAATTTGA+AGG | 0.450230 | 5_3:-10453143 | Msa0797990:five_prime_UTR |
| CGAGAAGCTACACGGATACC+TGG | 0.457347 | 5_3:-10449768 | Msa0797990:CDS |
| CTCCTTATTCTCGTTCTCCC+AGG | 0.459604 | 5_3:-10447398 | Msa0797990:intron |
| GGCAAGAAGGTCGGAGAAGA+AGG | 0.460367 | 5_3:-10453102 | Msa0797990:CDS |
| AGATAATTGCAAAAGAATAT+GGG | 0.462979 | 5_3:-10450045 | Msa0797990:CDS |
| ATAGGCGTCGCAGCCGCAGC+AGG | 0.465591 | 5_3:-10447777 | Msa0797990:CDS |
| AAGGATCTTACTCACAGGTT+GGG | 0.468137 | 5_3:-10450189 | Msa0797990:CDS |
| CTGCTCCATTTGCATCAGAC+AGG | 0.468882 | 5_3:-10451180 | Msa0797990:intron |
| AGGGAAATTCATTCATTCAT+CGG | 0.473574 | 5_3:-10453233 | Msa0797990:five_prime_UTR |
| TATATACATGCAGGGAATCA+AGG | 0.473761 | 5_3:-10449598 | Msa0797990:intron |
| TAAGATCCTTTGGTTGCAGC+AGG | 0.477039 | 5_3:+10450202 | None:intergenic |
| TGCGATTAGGGGACCGAGAA+CGG | 0.478186 | 5_3:+10447469 | None:intergenic |
| CTGGAGAAGCAGATGGAACT+AGG | 0.485701 | 5_3:-10449304 | Msa0797990:CDS |
| CATTCATTCATCGGGTTGGT+GGG | 0.486026 | 5_3:-10453224 | Msa0797990:five_prime_UTR |
| CGGGGAGTAGGACCGTGATC+TGG | 0.488896 | 5_3:+10449427 | None:intergenic |
| TGGAACTCGTGTGCTACATC+AGG | 0.490057 | 5_3:-10449748 | Msa0797990:CDS |
| CGTGCTCTCCTAGATTTCAT+CGG | 0.491493 | 5_3:-10451577 | Msa0797990:intron |
| GCGGAGAACGAGTGCGAGAA+GGG | 0.491633 | 5_3:+10447433 | None:intergenic |
| AACTGAGTCGTAAGGAAAGA+AGG | 0.499230 | 5_3:-10449821 | Msa0797990:CDS |
| TCTGGTGTATCCGTTGATAA+AGG | 0.500146 | 5_3:-10448913 | Msa0797990:CDS |
| GTAGAAGTCCAAGTAGAAGC+AGG | 0.500172 | 5_3:-10447524 | Msa0797990:CDS |
| CTAGTCGATTGAGTAGGTAT+AGG | 0.500217 | 5_3:-10447795 | Msa0797990:CDS |
| TCATTCATTCATCGGGTTGG+TGG | 0.503410 | 5_3:-10453225 | Msa0797990:five_prime_UTR |
| TGATTAACTGCAGAAGGTAC+AGG | 0.506954 | 5_3:-10447551 | Msa0797990:intron |
| TGCGAGAAGGGGACCGAGAA+CGG | 0.508604 | 5_3:+10447445 | None:intergenic |
| CGAGAATAAGCTTCGTAAGT+AGG | 0.508612 | 5_3:+10449569 | None:intergenic |
| GAATATGGGGTCAAAAGGTA+TGG | 0.513227 | 5_3:-10450031 | Msa0797990:CDS |
| AAAGAGAACAGGAGCGACAG+AGG | 0.514412 | 5_3:-10447837 | Msa0797990:CDS |
| GTGCTCTCCTAGATTTCATC+GGG | 0.515023 | 5_3:-10451576 | Msa0797990:intron |
| TCTCTCTCTTTCAACTTGAG+AGG | 0.516754 | 5_3:+10449794 | None:intergenic |
| CAATCCTTGTTGATCTTCGG+TGG | 0.520275 | 5_3:+10452938 | None:intergenic |
| GACTTTAGCACCTTTATCAA+CGG | 0.520392 | 5_3:+10448903 | None:intergenic |
| AGATTGCACACAAGCCTCGC+TGG | 0.522876 | 5_3:+10447236 | None:intergenic |
| TCAGGCTAAGAAACCGTTCA+AGG | 0.524214 | 5_3:-10447288 | Msa0797990:CDS |
| CCTATGCAAGGCGTTATTCA+CGG | 0.524561 | 5_3:-10449403 | Msa0797990:CDS |
| AATTCATTCATTCATCGGGT+TGG | 0.526146 | 5_3:-10453228 | Msa0797990:five_prime_UTR |
| TTCCTCAGGATACCCTGGAA+TGG | 0.529350 | 5_3:-10451736 | Msa0797990:intron |
| AGCGATGATAGCAATGATGA+AGG | 0.531426 | 5_3:-10450073 | Msa0797990:CDS |
| GTGTGATAAAATACCTTGGT+GGG | 0.539061 | 5_3:+10447740 | None:intergenic |
| AAAGGATCTTACTCACAGGT+TGG | 0.542897 | 5_3:-10450190 | Msa0797990:CDS |
| ATGGGGTCAAAAGGTATGGT+TGG | 0.544068 | 5_3:-10450027 | Msa0797990:CDS |
| CTCGAGTTGATACATTAAAC+CGG | 0.548200 | 5_3:-10449247 | Msa0797990:intron |
| ATATCTTGTTTCCCATTCCA+GGG | 0.548452 | 5_3:+10451724 | None:intergenic |
| TGCGGAGAACGAGTGCGAGA+AGG | 0.549507 | 5_3:+10447432 | None:intergenic |
| TAATGTATCAACTCGAGATG+TGG | 0.554923 | 5_3:+10449253 | None:intergenic |
| AATAACGCCTTGCATAGGAC+GGG | 0.555643 | 5_3:+10449408 | None:intergenic |
| GTAGAGGAAACTGAGTCGTA+AGG | 0.556893 | 5_3:-10449829 | Msa0797990:intron |
| AATGTATCAACTCGAGATGT+GGG | 0.557381 | 5_3:+10449254 | None:intergenic |
| ATTTGCGAGAATTTGAAGGA+AGG | 0.561861 | 5_3:-10453139 | Msa0797990:five_prime_UTR |
| GTGCAATCAATTCAAGTCGT+TGG | 0.564747 | 5_3:-10453002 | Msa0797990:CDS |
| TGAAACATTGTATGCATGAA+AGG | 0.566134 | 5_3:-10447259 | Msa0797990:CDS |
| GGGCTCTTAAAACCTCAACC+AGG | 0.567364 | 5_3:-10448044 | Msa0797990:CDS |
| CCTACTCCCCGTCCTATGCA+AGG | 0.568143 | 5_3:-10449415 | Msa0797990:CDS |
| GCGATGATAGCAATGATGAA+GGG | 0.569721 | 5_3:-10450072 | Msa0797990:CDS |
| CGAAGATGACGAGGATGATG+AGG | 0.571273 | 5_3:-10450104 | Msa0797990:CDS |
| ACGACTTGAATTGATTGCAC+AGG | 0.573876 | 5_3:+10453005 | None:intergenic |
| ATCGGGATTTAATAAAGCAT+CGG | 0.577658 | 5_3:-10451478 | Msa0797990:CDS |
| AAAATCAATCTCAATTGTCA+GGG | 0.581700 | 5_3:-10453252 | Msa0797990:five_prime_UTR |
| AGAATACATAACTGAATTTG+GGG | 0.582675 | 5_3:-10449330 | Msa0797990:CDS |
| TGCTACATCAGGACCCCTAC+CGG | 0.582784 | 5_3:-10449737 | Msa0797990:intron |
| AGATGTGGCATGAGGCAAGA+AGG | 0.585460 | 5_3:-10453115 | Msa0797990:CDS |
| CATGGATAAGAAAGCCAAAG+AGG | 0.585701 | 5_3:-10449996 | Msa0797990:CDS |
| CTGAAACTAGTCGATTGAGT+AGG | 0.588625 | 5_3:-10447801 | Msa0797990:CDS |
| TCAACGGATACACCAGAAGC+AGG | 0.590050 | 5_3:+10448919 | None:intergenic |
| TAGAAGTCCAAGTAGAAGCA+GGG | 0.590908 | 5_3:-10447523 | Msa0797990:CDS |
| AGGCAAAAGGAGATAATCAA+AGG | 0.590916 | 5_3:-10449965 | Msa0797990:CDS |
| AAATCTAGAGATGGAGGCCA+AGG | 0.591377 | 5_3:-10451206 | Msa0797990:CDS |
| ATACGACGGAAATGGTAAAG+AGG | 0.596376 | 5_3:-10450161 | Msa0797990:CDS |
| AAGTCTTGAAGCCACCCGTA+AGG | 0.597087 | 5_3:-10448885 | Msa0797990:intron |
| GAAGAAGGTCCATGACATGA+TGG | 0.597424 | 5_3:-10453087 | Msa0797990:CDS |
| TGTTTCATCAGTGCCTTGAA+CGG | 0.597979 | 5_3:+10447275 | None:intergenic |
| CGGAGAACGAGTGCGAGAAG+GGG | 0.598706 | 5_3:+10447434 | None:intergenic |
| TGATAGCAATGATGAAGGGA+TGG | 0.599977 | 5_3:-10450068 | Msa0797990:CDS |
| CCGTGAATAACGCCTTGCAT+AGG | 0.601191 | 5_3:+10449403 | None:intergenic |
| GATAATTGCAAAAGAATATG+GGG | 0.605763 | 5_3:-10450044 | Msa0797990:CDS |
| GCAACATGTAAATCTAGAGA+TGG | 0.608218 | 5_3:-10451215 | Msa0797990:CDS |
| TTAAAGGCAAGTGGTTCTGG+AGG | 0.608799 | 5_3:-10448065 | Msa0797990:CDS |
| AGAAGTCCAAGTAGAAGCAG+GGG | 0.610389 | 5_3:-10447522 | Msa0797990:CDS |
| TCACAGCCTGCTGCAACCAA+AGG | 0.610560 | 5_3:-10450208 | Msa0797990:CDS |
| GATTTCAGATGACGATGATG+AGG | 0.611188 | 5_3:-10450131 | Msa0797990:CDS |
| GCAGATGGAACTAGGCGTGA+AGG | 0.612922 | 5_3:-10449296 | Msa0797990:CDS |
| GAATAACGCCTTGCATAGGA+CGG | 0.613651 | 5_3:+10449407 | None:intergenic |
| GAGCAGCGTCCATCATGTCA+TGG | 0.613715 | 5_3:+10453078 | None:intergenic |
| CCGAGAACGGGTGCGATTAG+GGG | 0.613751 | 5_3:+10447458 | None:intergenic |
| AACCAAAGGATCTTACTCAC+AGG | 0.615408 | 5_3:-10450194 | Msa0797990:CDS |
| CCTTGCATAGGACGGGGAGT+AGG | 0.615985 | 5_3:+10449415 | None:intergenic |
| ACTCGAGATGTGGGAGATCG+CGG | 0.618313 | 5_3:+10449263 | None:intergenic |
| TAAGGAGAGCGTGAACGATG+CGG | 0.619732 | 5_3:+10447414 | None:intergenic |
| GCAGGTCAAGGTCCAGATCA+CGG | 0.623636 | 5_3:-10449439 | Msa0797990:intron |
| GGTGTGATAAAATACCTTGG+TGG | 0.625016 | 5_3:+10447739 | None:intergenic |
| TTAATAAAGCATCGGCGTAG+AGG | 0.625301 | 5_3:-10451470 | Msa0797990:CDS |
| ACATGTAAATCTAGAGATGG+AGG | 0.626918 | 5_3:-10451212 | Msa0797990:CDS |
| GGCTCTTAAAACCTCAACCA+GGG | 0.627093 | 5_3:-10448043 | Msa0797990:CDS |
| ATGTTGCAAAGCGTCCTCGT+CGG | 0.628314 | 5_3:+10451231 | None:intergenic |
| GTGGCATGAGGCAAGAAGGT+CGG | 0.629760 | 5_3:-10453111 | Msa0797990:CDS |
| AACGACTGTAACTCCTGCTG+CGG | 0.631562 | 5_3:+10447764 | None:intergenic |
| TTTGCTAGTGCTGAGCCTGA+AGG | 0.633784 | 5_3:+10448089 | None:intergenic |
| GAGTCGTAAGGAAAGAAGGA+AGG | 0.634052 | 5_3:-10449817 | Msa0797990:CDS |
| CTAGCAAAGTTAAAGGCAAG+TGG | 0.638031 | 5_3:-10448074 | Msa0797990:CDS |
| GTTTACATATTGCTCCCAAG+TGG | 0.639802 | 5_3:-10447213 | Msa0797990:CDS |
| AATTTGAAGGAAGGAAGATG+TGG | 0.640876 | 5_3:-10453130 | Msa0797990:exon |
| TGTCCAGGAAAAGTCTGAAG+AGG | 0.644395 | 5_3:-10451537 | Msa0797990:CDS |
| TGTGATAAAATACCTTGGTG+GGG | 0.644679 | 5_3:+10447741 | None:intergenic |
| AGAGAGAGCGAGAAGCTACA+CGG | 0.650224 | 5_3:-10449776 | Msa0797990:CDS |
| CGAGATGTGGGAGATCGCGG+TGG | 0.662862 | 5_3:+10449266 | None:intergenic |
| TAAAGGCAAGTGGTTCTGGA+GGG | 0.663853 | 5_3:-10448064 | Msa0797990:CDS |
| ATAACGCCTTGCATAGGACG+GGG | 0.672285 | 5_3:+10449409 | None:intergenic |
| GTTACAGTCGTTCCCCACCA+AGG | 0.676212 | 5_3:-10447753 | Msa0797990:intron |
| AGGAAGGAAGATGTGGCATG+AGG | 0.678562 | 5_3:-10453123 | Msa0797990:exon |
| CAAGCCACCGAAGATCAACA+AGG | 0.682803 | 5_3:-10452942 | Msa0797990:CDS |
| GTGATGGTATACCTTACGGG+TGG | 0.693583 | 5_3:+10448874 | None:intergenic |
| GTTTACCTTGCAAAACGTCG+CGG | 0.695099 | 5_3:-10453032 | Msa0797990:CDS |
| TGAGGAAGACGAAGATGACG+AGG | 0.698746 | 5_3:-10450113 | Msa0797990:CDS |
| GAATACATAACTGAATTTGG+GGG | 0.701409 | 5_3:-10449329 | Msa0797990:CDS |
| GCTCTTAAAACCTCAACCAG+GGG | 0.701777 | 5_3:-10448042 | Msa0797990:CDS |
| AATGGTAACAGTTACCGACG+AGG | 0.731571 | 5_3:-10451245 | Msa0797990:intron |
| GTATGCATGAAAGGCCAGCG+AGG | 0.750427 | 5_3:-10447250 | Msa0797990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAAAAATATAGAAAAAA+TGG | + | chr5_3:10447555-10447574 | None:intergenic | 10.0% |
| !!! | TTAAAATTGATTCTATAATT+TGG | - | chr5_3:10447595-10447614 | Msa0797990:intron | 10.0% |
| !!! | TAAAATTGATTCTATAATTT+GGG | - | chr5_3:10447596-10447615 | Msa0797990:intron | 10.0% |
| !!! | AAATAGCATAATTTTATTAA+CGG | + | chr5_3:10452833-10452852 | None:intergenic | 10.0% |
| !!! | TAAATTATCTTATTTGAAGT+AGG | + | chr5_3:10447656-10447675 | None:intergenic | 15.0% |
| !! | TGAAACAAATGTAATAATTT+AGG | - | chr5_3:10448125-10448144 | Msa0797990:intron | 15.0% |
| !! | GAAACAAATGTAATAATTTA+GGG | - | chr5_3:10448126-10448145 | Msa0797990:intron | 15.0% |
| !!! | TTTTTTTTTCTTCCATTAAA+TGG | - | chr5_3:10448188-10448207 | Msa0797990:intron | 15.0% |
| !! | TAAAACATATAATTCGTTTA+TGG | - | chr5_3:10448661-10448680 | Msa0797990:intron | 15.0% |
| !! | AAATAAGTTTCTGATAAAAA+GGG | + | chr5_3:10449636-10449655 | None:intergenic | 15.0% |
| !! | TAAATAAGTTTCTGATAAAA+AGG | + | chr5_3:10449637-10449656 | None:intergenic | 15.0% |
| !!! | TTTTTATCAGAAACTTATTT+AGG | - | chr5_3:10449636-10449655 | Msa0797990:intron | 15.0% |
| !!! | ATTTCTTTATGTAGTAATTT+TGG | - | chr5_3:10450015-10450034 | Msa0797990:CDS | 15.0% |
| !!! | ATATCTTATAAATTTTGTAG+AGG | - | chr5_3:10450602-10450621 | Msa0797990:intron | 15.0% |
| !!! | AAAATATCAATATTTTCTAC+CGG | + | chr5_3:10450732-10450751 | None:intergenic | 15.0% |
| !!! | ATTCTAAAACCATAAATAAT+TGG | + | chr5_3:10451311-10451330 | None:intergenic | 15.0% |
| !!! | TATATCCTTTTTTTTTCTTT+CGG | - | chr5_3:10452238-10452257 | Msa0797990:intron | 15.0% |
| !!! | AATAGCATAATTTTATTAAC+GGG | + | chr5_3:10452832-10452851 | None:intergenic | 15.0% |
| !! | AAACTATCGAAATCAAAATT+AGG | - | chr5_3:10447261-10447280 | Msa0797990:CDS | 20.0% |
| !! | AACTATCGAAATCAAAATTA+GGG | - | chr5_3:10447262-10447281 | Msa0797990:CDS | 20.0% |
| !! | AAATATAGAAAAAATGGAGA+AGG | + | chr5_3:10447549-10447568 | None:intergenic | 20.0% |
| !!! | ATTCTATAATTTGGGATTAA+TGG | - | chr5_3:10447604-10447623 | Msa0797990:intron | 20.0% |
| !! | TTTCTATTCATGATCAAAAT+TGG | - | chr5_3:10448036-10448055 | Msa0797990:CDS | 20.0% |
| !! | TTCTATTCATGATCAAAATT+GGG | - | chr5_3:10448037-10448056 | Msa0797990:CDS | 20.0% |
| !!! | AACTAACTTAATTACACTTT+TGG | + | chr5_3:10448170-10448189 | None:intergenic | 20.0% |
| !!! | TTTTACTAACAAAAATTCAG+AGG | + | chr5_3:10448646-10448665 | None:intergenic | 20.0% |
| !!! | TTATAATTCATTTTTTCCTC+AGG | - | chr5_3:10448697-10448716 | Msa0797990:intron | 20.0% |
| !! | TATAAACAGTTTGATTATTG+TGG | - | chr5_3:10449046-10449065 | Msa0797990:intron | 20.0% |
| !! | ATAAAATTGTAAATAGCTGT+TGG | - | chr5_3:10449390-10449409 | Msa0797990:CDS | 20.0% |
| !!! | TTTACATGAAAACAATTTTC+TGG | + | chr5_3:10449602-10449621 | None:intergenic | 20.0% |
| !!! | AATTGTTTTCATGTAAATTC+AGG | - | chr5_3:10449605-10449624 | Msa0797990:intron | 20.0% |
| !! | CATAAAGAAATAGACAATTA+TGG | + | chr5_3:10450006-10450025 | None:intergenic | 20.0% |
| !! | AGATAATTGCAAAAGAATAT+GGG | - | chr5_3:10450402-10450421 | Msa0797990:intron | 20.0% |
| !!! | TCAGTTATGTATTCTATTTT+AGG | + | chr5_3:10451112-10451131 | None:intergenic | 20.0% |
| !! | ATAGAATACATAACTGAATT+TGG | - | chr5_3:10451115-10451134 | Msa0797990:intron | 20.0% |
| !! | TAGAATACATAACTGAATTT+GGG | - | chr5_3:10451116-10451135 | Msa0797990:intron | 20.0% |
| !! | ATTATGCAAAATTCATTTCA+GGG | + | chr5_3:10451408-10451427 | None:intergenic | 20.0% |
| !! | AATTATGCAAAATTCATTTC+AGG | + | chr5_3:10451409-10451428 | None:intergenic | 20.0% |
| !!! | ATGTGAATAGAGTATTAAAA+TGG | - | chr5_3:10451614-10451633 | Msa0797990:intron | 20.0% |
| !! | AAATTCCGAAAGAAAAAAAA+AGG | + | chr5_3:10452246-10452265 | None:intergenic | 20.0% |
| !! | TTCGGAATTTATTATTACAA+TGG | - | chr5_3:10452256-10452275 | Msa0797990:intron | 20.0% |
| !! | TCGGAATTTATTATTACAAT+GGG | - | chr5_3:10452257-10452276 | Msa0797990:intron | 20.0% |
| !!! | TGTAATTTGTGTAACTTTAT+TGG | - | chr5_3:10452748-10452767 | Msa0797990:intron | 20.0% |
| !! | CATAATATTAATTAAACCAG+AGG | + | chr5_3:10452878-10452897 | None:intergenic | 20.0% |
| ! | AAAATCAATCTCAATTGTCA+GGG | - | chr5_3:10447195-10447214 | Msa0797990:CDS | 25.0% |
| !!! | TTTTGATTTCGATAGTTTCA+GGG | + | chr5_3:10447259-10447278 | None:intergenic | 25.0% |
| !!! | ATTTTGATTTCGATAGTTTC+AGG | + | chr5_3:10447260-10447279 | None:intergenic | 25.0% |
| !!! | GTAATTTAGGATCTTTTAGA+TGG | - | chr5_3:10447628-10447647 | Msa0797990:intron | 25.0% |
| ! | TTTGTTTATTTCACTGTTTC+TGG | - | chr5_3:10447676-10447695 | Msa0797990:intron | 25.0% |
| ! | AATTGATGTATTCAACGTAA+GGG | - | chr5_3:10447702-10447721 | Msa0797990:intron | 25.0% |
| ! | GAGAAAAAAAATAAGCTCAT+TGG | - | chr5_3:10447725-10447744 | Msa0797990:intron | 25.0% |
| !!! | TAATTTTAGTACAATGAGTG+AGG | - | chr5_3:10447805-10447824 | Msa0797990:CDS | 25.0% |
| ! | ATTTAATCAGTATGCATTTC+TGG | - | chr5_3:10447830-10447849 | Msa0797990:CDS | 25.0% |
| ! | TGAGCAAAAACAAAATGATA+GGG | + | chr5_3:10447871-10447890 | None:intergenic | 25.0% |
| !!! | CTTTTTTAAATCGAGCTTTT+AGG | - | chr5_3:10447906-10447925 | Msa0797990:intron | 25.0% |
| !! | GACCAAAAATCATCATTTTA+GGG | + | chr5_3:10447982-10448001 | None:intergenic | 25.0% |
| !! | CTGCTAAAAATCAAACTTTT+GGG | + | chr5_3:10448004-10448023 | None:intergenic | 25.0% |
| !! | TTTTGGTCATCAAATTGTTT+TGG | + | chr5_3:10448153-10448172 | None:intergenic | 25.0% |
| !! | TTTACGCTTTTACCATTTAA+TGG | + | chr5_3:10448203-10448222 | None:intergenic | 25.0% |
| ! | AATTGTTTGATCAAGCTAAA+AGG | - | chr5_3:10448347-10448366 | Msa0797990:intron | 25.0% |
| ! | AATTAAGAAAAGCGGAAAAT+AGG | + | chr5_3:10448522-10448541 | None:intergenic | 25.0% |
| !!! | AACAAGATATTTTGATTGAC+AGG | - | chr5_3:10448736-10448755 | Msa0797990:intron | 25.0% |
| !! | TTGTTAATTTTGAGCGTTAT+CGG | - | chr5_3:10448951-10448970 | Msa0797990:CDS | 25.0% |
| !!! | TTCACAAACTTGGTTTTTAA+TGG | - | chr5_3:10449184-10449203 | Msa0797990:intron | 25.0% |
| ! | TCCATATATCTTTATATGCA+TGG | - | chr5_3:10449358-10449377 | Msa0797990:CDS | 25.0% |
| ! | ACCATGCATATAAAGATATA+TGG | + | chr5_3:10449362-10449381 | None:intergenic | 25.0% |
| ! | TCTTAATGCAAATAATCAGA+TGG | - | chr5_3:10449432-10449451 | Msa0797990:CDS | 25.0% |
| ! | GAGATAATTGCAAAAGAATA+TGG | - | chr5_3:10450401-10450420 | Msa0797990:intron | 25.0% |
| ! | GATAATTGCAAAAGAATATG+GGG | - | chr5_3:10450403-10450422 | Msa0797990:intron | 25.0% |
| !!! | TATTCTATTTTAGGAGTCTT+TGG | + | chr5_3:10451103-10451122 | None:intergenic | 25.0% |
| ! | AGAATACATAACTGAATTTG+GGG | - | chr5_3:10451117-10451136 | Msa0797990:intron | 25.0% |
| ! | TCAATCTTGGCAATAATTAA+AGG | + | chr5_3:10451239-10451258 | None:intergenic | 25.0% |
| ! | TAATTATTGCCAAGATTGAT+TGG | - | chr5_3:10451240-10451259 | Msa0797990:intron | 25.0% |
| ! | TTTCCTGAACCAATTATTTA+TGG | - | chr5_3:10451299-10451318 | Msa0797990:intron | 25.0% |
| !! | AAACCATAAATAATTGGTTC+AGG | + | chr5_3:10451305-10451324 | None:intergenic | 25.0% |
| !!! | TTTTAGAATAGATCATGACT+AGG | - | chr5_3:10451322-10451341 | Msa0797990:intron | 25.0% |
| !! | GAGTATTAAAATGGTTTTTG+TGG | - | chr5_3:10451623-10451642 | Msa0797990:intron | 25.0% |
| ! | ATGGTAGAACTATATTGTTT+AGG | - | chr5_3:10451661-10451680 | Msa0797990:intron | 25.0% |
| ! | AACATTGAATTATCTCTTGA+GGG | + | chr5_3:10451851-10451870 | None:intergenic | 25.0% |
| ! | ATATTATGATTAACTGCAGA+AGG | - | chr5_3:10452890-10452909 | Msa0797990:intron | 25.0% |
| CAAAATCAATCTCAATTGTC+AGG | - | chr5_3:10447194-10447213 | Msa0797990:CDS | 30.0% | |
| AGGGAAATTCATTCATTCAT+CGG | - | chr5_3:10447214-10447233 | Msa0797990:CDS | 30.0% | |
| ! | TTTGATTTCGATAGTTTCAG+GGG | + | chr5_3:10447258-10447277 | None:intergenic | 30.0% |
| TAACAATCCTTGTTGATCTT+CGG | + | chr5_3:10447515-10447534 | None:intergenic | 30.0% | |
| TGGGATTAATGGTGTAATTT+AGG | - | chr5_3:10447615-10447634 | Msa0797990:intron | 30.0% | |
| GAATTGATGTATTCAACGTA+AGG | - | chr5_3:10447701-10447720 | Msa0797990:intron | 30.0% | |
| ATTGATGTATTCAACGTAAG+GGG | - | chr5_3:10447703-10447722 | Msa0797990:intron | 30.0% | |
| GTTGATACTCTTTGTATGTT+TGG | - | chr5_3:10447778-10447797 | Msa0797990:CDS | 30.0% | |
| !! | ATGCATTTCTGGTAATGATA+AGG | - | chr5_3:10447841-10447860 | Msa0797990:CDS | 30.0% |
| GTGAGCAAAAACAAAATGAT+AGG | + | chr5_3:10447872-10447891 | None:intergenic | 30.0% | |
| !!! | TTTGTTTTTGCTCACGAAAA+TGG | - | chr5_3:10447877-10447896 | Msa0797990:intron | 30.0% |
| AAGCTCGATTTAAAAAAGAG+AGG | + | chr5_3:10447904-10447923 | None:intergenic | 30.0% | |
| GCAACAAATGTGATAATTGA+TGG | + | chr5_3:10447933-10447952 | None:intergenic | 30.0% | |
| ! | GGACCAAAAATCATCATTTT+AGG | + | chr5_3:10447983-10448002 | None:intergenic | 30.0% |
| ! | GCTGCTAAAAATCAAACTTT+TGG | + | chr5_3:10448005-10448024 | None:intergenic | 30.0% |
| !!! | TTGATTTTTAGCAGCAATAG+TGG | - | chr5_3:10448010-10448029 | Msa0797990:CDS | 30.0% |
| !!! | GACATTAATTTGCCACTTTT+GGG | - | chr5_3:10448059-10448078 | Msa0797990:CDS | 30.0% |
| ! | TCCTATATGCATTGATGAAA+GGG | - | chr5_3:10448228-10448247 | Msa0797990:intron | 30.0% |
| TTGGATTGAGAGTAATTCAA+TGG | - | chr5_3:10448262-10448281 | Msa0797990:intron | 30.0% | |
| ATTCTCATATTCGAAGAGAA+TGG | - | chr5_3:10448384-10448403 | Msa0797990:intron | 30.0% | |
| CCAAGCAAAATTAAGAAAAG+CGG | + | chr5_3:10448530-10448549 | None:intergenic | 30.0% | |
| ! | CGCTTTTCTTAATTTTGCTT+GGG | - | chr5_3:10448528-10448547 | Msa0797990:intron | 30.0% |
| ! | AAATCTGCAAAGGTATAGAT+AGG | + | chr5_3:10448844-10448863 | None:intergenic | 30.0% |
| TATACCTTTGCAGATTTGAT+GGG | - | chr5_3:10448847-10448866 | Msa0797990:intron | 30.0% | |
| ! | TGTTAATTTTGAGCGTTATC+GGG | - | chr5_3:10448952-10448971 | Msa0797990:CDS | 30.0% |
| ATCGGGATTTAATAAAGCAT+CGG | - | chr5_3:10448969-10448988 | Msa0797990:intron | 30.0% | |
| CTGATAATATTGCCATAGAA+CGG | - | chr5_3:10449105-10449124 | Msa0797990:intron | 30.0% | |
| CATAGCTAAATTCACAAACT+TGG | - | chr5_3:10449174-10449193 | Msa0797990:intron | 30.0% | |
| ! | ATGTTTGTTGAGTGCATATT+TGG | + | chr5_3:10449802-10449821 | None:intergenic | 30.0% |
| TGTCTATAATGAGAACAATG+GGG | + | chr5_3:10449836-10449855 | None:intergenic | 30.0% | |
| CTGTCTATAATGAGAACAAT+GGG | + | chr5_3:10449837-10449856 | None:intergenic | 30.0% | |
| ACTGTCTATAATGAGAACAA+TGG | + | chr5_3:10449838-10449857 | None:intergenic | 30.0% | |
| !!! | TTTTTAGTTCATCTAAGCTG+TGG | + | chr5_3:10449934-10449953 | None:intergenic | 30.0% |
| AAGAAATAGACAATTATGGC+TGG | + | chr5_3:10450002-10450021 | None:intergenic | 30.0% | |
| !! | TTTGTCTATTGATTCTTGCA+TGG | - | chr5_3:10450101-10450120 | Msa0797990:CDS | 30.0% |
| AGCTGCAAATTATAGATCTA+CGG | + | chr5_3:10450138-10450157 | None:intergenic | 30.0% | |
| !!! | ATATTTTGAGATTACCGTGT+AGG | - | chr5_3:10450565-10450584 | Msa0797990:intron | 30.0% |
| ! | ATCAATATTTTCTACCGGTA+GGG | + | chr5_3:10450727-10450746 | None:intergenic | 30.0% |
| ! | TATCAATATTTTCTACCGGT+AGG | + | chr5_3:10450728-10450747 | None:intergenic | 30.0% |
| TCAGATATTCTTCGTTCAAT+CGG | + | chr5_3:10450762-10450781 | None:intergenic | 30.0% | |
| !! | TTCTTGCATACTAGTCTTAA+TGG | - | chr5_3:10450817-10450836 | Msa0797990:intron | 30.0% |
| TTGACTCAATATATACATGC+AGG | - | chr5_3:10450840-10450859 | Msa0797990:intron | 30.0% | |
| TGACTCAATATATACATGCA+GGG | - | chr5_3:10450841-10450860 | Msa0797990:intron | 30.0% | |
| AACGAGAAGAATGAGTAAAA+TGG | + | chr5_3:10450950-10450969 | None:intergenic | 30.0% | |
| TTTACTCATTCTTCTCGTTA+AGG | - | chr5_3:10450951-10450970 | Msa0797990:intron | 30.0% | |
| CTCGTTAAGGAGAATTTATT+TGG | - | chr5_3:10450964-10450983 | Msa0797990:intron | 30.0% | |
| GAATACATAACTGAATTTGG+GGG | - | chr5_3:10451118-10451137 | Msa0797990:intron | 30.0% | |
| ! | ATTGGTTCAGGAAACAATAT+GGG | + | chr5_3:10451293-10451312 | None:intergenic | 30.0% |
| ! | AATTGGTTCAGGAAACAATA+TGG | + | chr5_3:10451294-10451313 | None:intergenic | 30.0% |
| TAATATTTACATGCAGCTAC+AGG | + | chr5_3:10451433-10451452 | None:intergenic | 30.0% | |
| ACATTCACATATACACTGTT+GGG | + | chr5_3:10451598-10451617 | None:intergenic | 30.0% | |
| ! | TTTTTGTGGTTTCATCTGTT+AGG | - | chr5_3:10451637-10451656 | Msa0797990:intron | 30.0% |
| CATTCTTAAAGATGTACACA+AGG | - | chr5_3:10451730-10451749 | Msa0797990:CDS | 30.0% | |
| GAACATTGAATTATCTCTTG+AGG | + | chr5_3:10451852-10451871 | None:intergenic | 30.0% | |
| !! | ATTCTGTTCTGTTGTTTCTT+TGG | + | chr5_3:10451943-10451962 | None:intergenic | 30.0% |
| AATGCTGATGCAAAATCTAA+TGG | + | chr5_3:10452154-10452173 | None:intergenic | 30.0% | |
| TACAAATCCTAGAGTATACA+AGG | + | chr5_3:10452732-10452751 | None:intergenic | 30.0% | |
| ! | AGAACTTGAGTGATATTTTC+TGG | + | chr5_3:10452953-10452972 | None:intergenic | 30.0% |
| GAAAGACATTAATTTCACCT+GGG | + | chr5_3:10453069-10453088 | None:intergenic | 30.0% | |
| AGAAAGACATTAATTTCACC+TGG | + | chr5_3:10453070-10453089 | None:intergenic | 30.0% | |
| AAAGAATGATTGAGATGATG+AGG | + | chr5_3:10453117-10453136 | None:intergenic | 30.0% | |
| ATTCAGAAAGTTGACATTTC+AGG | - | chr5_3:10453141-10453160 | Msa0797990:five_prime_UTR | 30.0% | |
| TGAAACATTGTATGCATGAA+AGG | - | chr5_3:10453188-10453207 | Msa0797990:intron | 30.0% | |
| GGGAAATTCATTCATTCATC+GGG | - | chr5_3:10447215-10447234 | Msa0797990:CDS | 35.0% | |
| AATTCATTCATTCATCGGGT+TGG | - | chr5_3:10447219-10447238 | Msa0797990:CDS | 35.0% | |
| ! | TGTGATTTGCGAGAATTTGA+AGG | - | chr5_3:10447304-10447323 | Msa0797990:intron | 35.0% |
| ATTTGCGAGAATTTGAAGGA+AGG | - | chr5_3:10447308-10447327 | Msa0797990:intron | 35.0% | |
| AATTTGAAGGAAGGAAGATG+TGG | - | chr5_3:10447317-10447336 | Msa0797990:intron | 35.0% | |
| !! | GTTTATTTCACTGTTTCTGG+AGG | - | chr5_3:10447679-10447698 | Msa0797990:intron | 35.0% |
| ! | TTTGCACCTGATCAAGTTTT+TGG | - | chr5_3:10447956-10447975 | Msa0797990:intron | 35.0% |
| ! | GGCCCTAAAATGATGATTTT+TGG | - | chr5_3:10447977-10447996 | Msa0797990:intron | 35.0% |
| !!! | GGACATTAATTTGCCACTTT+TGG | - | chr5_3:10448058-10448077 | Msa0797990:CDS | 35.0% |
| ! | CTCCTATATGCATTGATGAA+AGG | - | chr5_3:10448227-10448246 | Msa0797990:intron | 35.0% |
| ACCCTTTCATCAATGCATAT+AGG | + | chr5_3:10448232-10448251 | None:intergenic | 35.0% | |
| GATTGAGAGTAATTCAATGG+TGG | - | chr5_3:10448265-10448284 | Msa0797990:intron | 35.0% | |
| ! | CAATTGTTTCTTAACCTCCA+GGG | + | chr5_3:10448323-10448342 | None:intergenic | 35.0% |
| ! | TCAATTGTTTCTTAACCTCC+AGG | + | chr5_3:10448324-10448343 | None:intergenic | 35.0% |
| ! | AATGGAATAATTGTGCCGAT+AGG | - | chr5_3:10448402-10448421 | Msa0797990:intron | 35.0% |
| !! | CCGCTTTTCTTAATTTTGCT+TGG | - | chr5_3:10448527-10448546 | Msa0797990:intron | 35.0% |
| ! | ATATCTTGTTTCCCATTCCA+GGG | + | chr5_3:10448726-10448745 | None:intergenic | 35.0% |
| ! | AATATCTTGTTTCCCATTCC+AGG | + | chr5_3:10448727-10448746 | None:intergenic | 35.0% |
| CTATACCTTTGCAGATTTGA+TGG | - | chr5_3:10448846-10448865 | Msa0797990:intron | 35.0% | |
| ! | TTCATCGGGATAGTAGTTTT+AGG | - | chr5_3:10448885-10448904 | Msa0797990:intron | 35.0% |
| CGTTCTATGGCAATATTATC+AGG | + | chr5_3:10449107-10449126 | None:intergenic | 35.0% | |
| ! | CTAGAAACTTTTCCGTTCTA+TGG | + | chr5_3:10449120-10449139 | None:intergenic | 35.0% |
| ! | CGGAAAAGTTTCTAGAAATC+AGG | - | chr5_3:10449125-10449144 | Msa0797990:intron | 35.0% |
| TTAGCTATGAAACTAATCCC+TGG | + | chr5_3:10449163-10449182 | None:intergenic | 35.0% | |
| GCAACATGTAAATCTAGAGA+TGG | - | chr5_3:10449232-10449251 | Msa0797990:intron | 35.0% | |
| ACATGTAAATCTAGAGATGG+AGG | - | chr5_3:10449235-10449254 | Msa0797990:intron | 35.0% | |
| AACAGTCAGTTAAAAATGCG+TGG | + | chr5_3:10449307-10449326 | None:intergenic | 35.0% | |
| !! | TTGTAAATAGCTGTTGGTTC+TGG | - | chr5_3:10449396-10449415 | Msa0797990:CDS | 35.0% |
| !! | TGTAAATAGCTGTTGGTTCT+GGG | - | chr5_3:10449397-10449416 | Msa0797990:CDS | 35.0% |
| TCAAAATAATCAGTAGCGCA+TGG | + | chr5_3:10449489-10449508 | None:intergenic | 35.0% | |
| ACTCGAGAGTTTGACAATAA+TGG | + | chr5_3:10449522-10449541 | None:intergenic | 35.0% | |
| ! | ACATTGAACCACTGTCTTTT+AGG | + | chr5_3:10449699-10449718 | None:intergenic | 35.0% |
| ACATGTTAAATGACAAGCGT+TGG | - | chr5_3:10449737-10449756 | Msa0797990:intron | 35.0% | |
| GTACAAACTATTATCCTCAG+CGG | - | chr5_3:10449764-10449783 | Msa0797990:CDS | 35.0% | |
| AGTTTAGTCCAACTCTAACA+AGG | - | chr5_3:10449966-10449985 | Msa0797990:CDS | 35.0% | |
| GTTTAGTCCAACTCTAACAA+GGG | - | chr5_3:10449967-10449986 | Msa0797990:CDS | 35.0% | |
| TTTAGTCCAACTCTAACAAG+GGG | - | chr5_3:10449968-10449987 | Msa0797990:CDS | 35.0% | |
| AATAGACAATTATGGCTGGA+CGG | + | chr5_3:10449998-10450017 | None:intergenic | 35.0% | |
| CAAAAGAATATGGGGTCAAA+AGG | - | chr5_3:10450411-10450430 | Msa0797990:intron | 35.0% | |
| AAGCCAAAGAGGAACAAAAA+AGG | - | chr5_3:10450462-10450481 | Msa0797990:intron | 35.0% | |
| !!! | TTGCCTTTTTTGTTCCTCTT+TGG | + | chr5_3:10450468-10450487 | None:intergenic | 35.0% |
| AGAGGAACAAAAAAGGCAAA+AGG | - | chr5_3:10450469-10450488 | Msa0797990:intron | 35.0% | |
| AGGCAAAAGGAGATAATCAA+AGG | - | chr5_3:10450482-10450501 | Msa0797990:intron | 35.0% | |
| ACATTTCCACTTACAATTGC+AGG | + | chr5_3:10450512-10450531 | None:intergenic | 35.0% | |
| ACCAGTCAAAAAATCCTACA+CGG | + | chr5_3:10450582-10450601 | None:intergenic | 35.0% | |
| ! | TCAATATTTTCTACCGGTAG+GGG | + | chr5_3:10450726-10450745 | None:intergenic | 35.0% |
| TATATACATGCAGGGAATCA+AGG | - | chr5_3:10450849-10450868 | Msa0797990:intron | 35.0% | |
| ! | AAGCTTATTCTCGTTCTAGA+AGG | - | chr5_3:10450888-10450907 | Msa0797990:intron | 35.0% |
| ! | TTCTGACCTTTTCAATATGC+AGG | - | chr5_3:10450990-10451009 | Msa0797990:intron | 35.0% |
| AATGTATCAACTCGAGATGT+GGG | + | chr5_3:10451196-10451215 | None:intergenic | 35.0% | |
| TAATGTATCAACTCGAGATG+TGG | + | chr5_3:10451197-10451216 | None:intergenic | 35.0% | |
| !! | CTCGAGTTGATACATTAAAC+CGG | - | chr5_3:10451200-10451219 | Msa0797990:CDS | 35.0% |
| ! | AGTTGATACATTAAACCGGT+CGG | - | chr5_3:10451204-10451223 | Msa0797990:CDS | 35.0% |
| AAAGACTGTCCAATCAATCT+TGG | + | chr5_3:10451252-10451271 | None:intergenic | 35.0% | |
| GACTTTAGCACCTTTATCAA+CGG | + | chr5_3:10451547-10451566 | None:intergenic | 35.0% | |
| CACATTCACATATACACTGT+TGG | + | chr5_3:10451599-10451618 | None:intergenic | 35.0% | |
| ! | GTTTCTTTGGCATATTTCTG+TGG | + | chr5_3:10451930-10451949 | None:intergenic | 35.0% |
| TAATACTGCCATTCGATCAT+TGG | - | chr5_3:10452199-10452218 | Msa0797990:intron | 35.0% | |
| TTACAGTACCAATGATCGAA+TGG | + | chr5_3:10452210-10452229 | None:intergenic | 35.0% | |
| !! | ATCCTTTTAAGTCTCTCTTG+GGG | + | chr5_3:10452445-10452464 | None:intergenic | 35.0% |
| !! | GATCCTTTTAAGTCTCTCTT+GGG | + | chr5_3:10452446-10452465 | None:intergenic | 35.0% |
| !! | TGATCCTTTTAAGTCTCTCT+TGG | + | chr5_3:10452447-10452466 | None:intergenic | 35.0% |
| TGTGATAAAATACCTTGGTG+GGG | + | chr5_3:10452709-10452728 | None:intergenic | 35.0% | |
| GTGTGATAAAATACCTTGGT+GGG | + | chr5_3:10452710-10452729 | None:intergenic | 35.0% | |
| CAAGGTGTGATAAAATACCT+TGG | + | chr5_3:10452714-10452733 | None:intergenic | 35.0% | |
| TATCACACCTTGTATACTCT+AGG | - | chr5_3:10452722-10452741 | Msa0797990:intron | 35.0% | |
| ! | TCATAACACCTTGATGGTTA+AGG | + | chr5_3:10452778-10452797 | None:intergenic | 35.0% |
| GTTATGACTTCTCAGCAAAA+TGG | - | chr5_3:10452791-10452810 | Msa0797990:intron | 35.0% | |
| CAGCAAAATGGAATAGTGAA+TGG | - | chr5_3:10452803-10452822 | Msa0797990:intron | 35.0% | |
| ! | TGTTTTCCTTCTAACCACTT+GGG | + | chr5_3:10453251-10453270 | None:intergenic | 35.0% |
| ACGACTTGAATTGATTGCAC+AGG | + | chr5_3:10447445-10447464 | None:intergenic | 40.0% | |
| GTGCAATCAATTCAAGTCGT+TGG | - | chr5_3:10447445-10447464 | Msa0797990:CDS | 40.0% | |
| TTAGGGCCAAAAACTTGATC+AGG | + | chr5_3:10447965-10447984 | None:intergenic | 40.0% | |
| ! | GGCCAAAATCACCATTTTCT+GGG | - | chr5_3:10448080-10448099 | Msa0797990:CDS | 40.0% |
| ! | GCCAAAATCACCATTTTCTG+GGG | - | chr5_3:10448081-10448100 | Msa0797990:CDS | 40.0% |
| ! | TCCCCAGAAAATGGTGATTT+TGG | + | chr5_3:10448085-10448104 | None:intergenic | 40.0% |
| !! | CACCATTTTCTGGGGAAAAA+AGG | - | chr5_3:10448089-10448108 | Msa0797990:CDS | 40.0% |
| !!! | AGCCTTTTTTCCCCAGAAAA+TGG | + | chr5_3:10448094-10448113 | None:intergenic | 40.0% |
| TGAAAGGGTGACATGGAATT+TGG | - | chr5_3:10448243-10448262 | Msa0797990:intron | 40.0% | |
| !! | CCCATGATTTGCTAACCTAT+CGG | + | chr5_3:10448420-10448439 | None:intergenic | 40.0% |
| CCGATAGGTTAGCAAATCAT+GGG | - | chr5_3:10448417-10448436 | Msa0797990:intron | 40.0% | |
| AGTGAATCCCACTAAAAAGC+CGG | + | chr5_3:10448453-10448472 | None:intergenic | 40.0% | |
| TATTCTTGCCTGACATAGTC+GGG | + | chr5_3:10448477-10448496 | None:intergenic | 40.0% | |
| GTATTCTTGCCTGACATAGT+CGG | + | chr5_3:10448478-10448497 | None:intergenic | 40.0% | |
| CAAAATGCCAAATCCCAACT+AGG | + | chr5_3:10448584-10448603 | None:intergenic | 40.0% | |
| !! | TTTGAAGCATTGCAAGCTCT+TGG | - | chr5_3:10448600-10448619 | Msa0797990:intron | 40.0% |
| !!! | ATTTTTTCCTCAGGATACCC+TGG | - | chr5_3:10448706-10448725 | Msa0797990:intron | 40.0% |
| CTACTATCCCGATGAAATCT+AGG | + | chr5_3:10448881-10448900 | None:intergenic | 40.0% | |
| !! | TTAATAAAGCATCGGCGTAG+AGG | - | chr5_3:10448977-10448996 | Msa0797990:intron | 40.0% |
| ! | ACTGTCTTTTAGGCATATCG+AGG | + | chr5_3:10449689-10449708 | None:intergenic | 40.0% |
| TCGATATGCCTAAAAGACAG+TGG | - | chr5_3:10449688-10449707 | Msa0797990:intron | 40.0% | |
| ATGAATCCAAGAGACTGATG+AGG | - | chr5_3:10449899-10449918 | Msa0797990:intron | 40.0% | |
| GATTCTTGCATGGTCTAAAC+TGG | - | chr5_3:10450111-10450130 | Msa0797990:CDS | 40.0% | |
| AACCAAAGGATCTTACTCAC+AGG | - | chr5_3:10450253-10450272 | Msa0797990:intron | 40.0% | |
| AACCTGTGAGTAAGATCCTT+TGG | + | chr5_3:10450258-10450277 | None:intergenic | 40.0% | |
| AAAGGATCTTACTCACAGGT+TGG | - | chr5_3:10450257-10450276 | Msa0797990:intron | 40.0% | |
| AAGGATCTTACTCACAGGTT+GGG | - | chr5_3:10450258-10450277 | Msa0797990:intron | 40.0% | |
| ATACGACGGAAATGGTAAAG+AGG | - | chr5_3:10450286-10450305 | Msa0797990:intron | 40.0% | |
| GATTTCAGATGACGATGATG+AGG | - | chr5_3:10450316-10450335 | Msa0797990:intron | 40.0% | |
| AGCGATGATAGCAATGATGA+AGG | - | chr5_3:10450374-10450393 | Msa0797990:intron | 40.0% | |
| GCGATGATAGCAATGATGAA+GGG | - | chr5_3:10450375-10450394 | Msa0797990:intron | 40.0% | |
| TGATAGCAATGATGAAGGGA+TGG | - | chr5_3:10450379-10450398 | Msa0797990:intron | 40.0% | |
| GAATATGGGGTCAAAAGGTA+TGG | - | chr5_3:10450416-10450435 | Msa0797990:intron | 40.0% | |
| !! | GTATGGTTGGCTTGTTTACA+TGG | - | chr5_3:10450433-10450452 | Msa0797990:intron | 40.0% |
| CATGGATAAGAAAGCCAAAG+AGG | - | chr5_3:10450451-10450470 | Msa0797990:intron | 40.0% | |
| !!! | ACCGTGTAGGATTTTTTGAC+TGG | - | chr5_3:10450578-10450597 | Msa0797990:intron | 40.0% |
| AACTGAGTCGTAAGGAAAGA+AGG | - | chr5_3:10450626-10450645 | Msa0797990:intron | 40.0% | |
| TCTCTCTCTTTCAACTTGAG+AGG | + | chr5_3:10450656-10450675 | None:intergenic | 40.0% | |
| CGAGAATAAGCTTCGTAAGT+AGG | + | chr5_3:10450881-10450900 | None:intergenic | 40.0% | |
| CCTTGACCTGCATATTGAAA+AGG | + | chr5_3:10450999-10451018 | None:intergenic | 40.0% | |
| ! | CCTTTTCAATATGCAGGTCA+AGG | - | chr5_3:10450996-10451015 | Msa0797990:intron | 40.0% |
| !! | TAGGAGTCTTTGGTTTGCTT+CGG | + | chr5_3:10451093-10451112 | None:intergenic | 40.0% |
| AGATCATGACTAGGATTGTC+AGG | - | chr5_3:10451331-10451350 | Msa0797990:intron | 40.0% | |
| GATCATGACTAGGATTGTCA+GGG | - | chr5_3:10451332-10451351 | Msa0797990:intron | 40.0% | |
| TGATACCTCTACTGTATTGC+AGG | - | chr5_3:10451466-10451485 | Msa0797990:intron | 40.0% | |
| ! | TCTGGTGTATCCGTTGATAA+AGG | - | chr5_3:10451534-10451553 | Msa0797990:CDS | 40.0% |
| ! | TTGGGTGATGGTATACCTTA+CGG | + | chr5_3:10451580-10451599 | None:intergenic | 40.0% |
| ACATATACACTGTTGGGTGA+TGG | + | chr5_3:10451592-10451611 | None:intergenic | 40.0% | |
| GTGGTTTCATCTGTTAGGAA+TGG | - | chr5_3:10451642-10451661 | Msa0797990:intron | 40.0% | |
| !!! | GAGGGAACTTGTTTGTTTTG+TGG | + | chr5_3:10451833-10451852 | None:intergenic | 40.0% |
| TGGCAGAGGAGACAATTTAT+CGG | + | chr5_3:10451875-10451894 | None:intergenic | 40.0% | |
| GCTATCTGAGTATCTGACAT+TGG | + | chr5_3:10451895-10451914 | None:intergenic | 40.0% | |
| CTCAGCACTAGCAAAGTTAA+AGG | - | chr5_3:10452366-10452385 | Msa0797990:intron | 40.0% | |
| CTAGCAAAGTTAAAGGCAAG+TGG | - | chr5_3:10452373-10452392 | Msa0797990:intron | 40.0% | |
| AAGTTAAAGGCAAGTGGTTC+TGG | - | chr5_3:10452379-10452398 | Msa0797990:intron | 40.0% | |
| ACAAGCCAAGAAAAGAGAAC+AGG | - | chr5_3:10452599-10452618 | Msa0797990:intron | 40.0% | |
| CTGAAACTAGTCGATTGAGT+AGG | - | chr5_3:10452646-10452665 | Msa0797990:intron | 40.0% | |
| CTAGTCGATTGAGTAGGTAT+AGG | - | chr5_3:10452652-10452671 | Msa0797990:intron | 40.0% | |
| GGTGTGATAAAATACCTTGG+TGG | + | chr5_3:10452711-10452730 | None:intergenic | 40.0% | |
| TTGGAACACCTTAACCATCA+AGG | - | chr5_3:10452767-10452786 | Msa0797990:intron | 40.0% | |
| GAGAAGTCATAACACCTTGA+TGG | + | chr5_3:10452784-10452803 | None:intergenic | 40.0% | |
| ACCAGAGGAAAACAAAGCAA+GGG | + | chr5_3:10452863-10452882 | None:intergenic | 40.0% | |
| AACCAGAGGAAAACAAAGCA+AGG | + | chr5_3:10452864-10452883 | None:intergenic | 40.0% | |
| ! | TGATTAACTGCAGAAGGTAC+AGG | - | chr5_3:10452896-10452915 | Msa0797990:intron | 40.0% |
| TAGAAGTCCAAGTAGAAGCA+GGG | - | chr5_3:10452924-10452943 | Msa0797990:intron | 40.0% | |
| TGTTTCATCAGTGCCTTGAA+CGG | + | chr5_3:10453175-10453194 | None:intergenic | 40.0% | |
| GTTTACATATTGCTCCCAAG+TGG | - | chr5_3:10453234-10453253 | Msa0797990:five_prime_UTR | 40.0% | |
| ! | GTGTTTTCCTTCTAACCACT+TGG | + | chr5_3:10453252-10453271 | None:intergenic | 40.0% |
| !! | TCATTCATTCATCGGGTTGG+TGG | - | chr5_3:10447222-10447241 | Msa0797990:CDS | 45.0% |
| !! | CATTCATTCATCGGGTTGGT+GGG | - | chr5_3:10447223-10447242 | Msa0797990:CDS | 45.0% |
| GAAGAAGGTCCATGACATGA+TGG | - | chr5_3:10447360-10447379 | Msa0797990:intron | 45.0% | |
| ! | GCGACGTTTTGCAAGGTAAA+CGG | + | chr5_3:10447416-10447435 | None:intergenic | 45.0% |
| GTTTACCTTGCAAAACGTCG+CGG | - | chr5_3:10447415-10447434 | Msa0797990:CDS | 45.0% | |
| CAATCCTTGTTGATCTTCGG+TGG | + | chr5_3:10447512-10447531 | None:intergenic | 45.0% | |
| !! | TGGTGATTTTGGCCCAAAAG+TGG | + | chr5_3:10448074-10448093 | None:intergenic | 45.0% |
| ! | GGGCCAAAATCACCATTTTC+TGG | - | chr5_3:10448079-10448098 | Msa0797990:CDS | 45.0% |
| ! | GCATTGATGAAAGGGTGACA+TGG | - | chr5_3:10448236-10448255 | Msa0797990:intron | 45.0% |
| GTTTCTTAACCTCCAGGGTA+TGG | + | chr5_3:10448318-10448337 | None:intergenic | 45.0% | |
| GCCGATAGGTTAGCAAATCA+TGG | - | chr5_3:10448416-10448435 | Msa0797990:intron | 45.0% | |
| AATCATGGGCATTCCTTGTC+CGG | - | chr5_3:10448431-10448450 | Msa0797990:intron | 45.0% | |
| ! | TTCCTTGTCCGGCTTTTTAG+TGG | - | chr5_3:10448442-10448461 | Msa0797990:intron | 45.0% |
| !! | TCCTTGTCCGGCTTTTTAGT+GGG | - | chr5_3:10448443-10448462 | Msa0797990:intron | 45.0% |
| ATTCACTTCCCGACTATGTC+AGG | - | chr5_3:10448466-10448485 | Msa0797990:intron | 45.0% | |
| GTTTGCACCCCAAAGAGAAA+GGG | + | chr5_3:10448562-10448581 | None:intergenic | 45.0% | |
| ! | TTTGGGGTGCAAACCTAGTT+GGG | - | chr5_3:10448568-10448587 | Msa0797990:intron | 45.0% |
| GTGCAAACCTAGTTGGGATT+TGG | - | chr5_3:10448574-10448593 | Msa0797990:intron | 45.0% | |
| CGTGCTCTCCTAGATTTCAT+CGG | - | chr5_3:10448870-10448889 | Msa0797990:intron | 45.0% | |
| GTGCTCTCCTAGATTTCATC+GGG | - | chr5_3:10448871-10448890 | Msa0797990:intron | 45.0% | |
| !!! | TAGTAGTTTTAGGCGTGTCC+AGG | - | chr5_3:10448895-10448914 | Msa0797990:CDS | 45.0% |
| TGTCCAGGAAAAGTCTGAAG+AGG | - | chr5_3:10448910-10448929 | Msa0797990:CDS | 45.0% | |
| ! | CTTCCTCTTCAGACTTTTCC+TGG | + | chr5_3:10448916-10448935 | None:intergenic | 45.0% |
| GAAACTAATCCCTGGATGTC+AGG | + | chr5_3:10449155-10449174 | None:intergenic | 45.0% | |
| AATGGTAACAGTTACCGACG+AGG | - | chr5_3:10449202-10449221 | Msa0797990:intron | 45.0% | |
| AAATCTAGAGATGGAGGCCA+AGG | - | chr5_3:10449241-10449260 | Msa0797990:intron | 45.0% | |
| TCCATTTGCATCAGACAGGT+TGG | - | chr5_3:10449271-10449290 | Msa0797990:CDS | 45.0% | |
| CCATTTGCATCAGACAGGTT+GGG | - | chr5_3:10449272-10449291 | Msa0797990:CDS | 45.0% | |
| GTCGCGTTAACTCAATTCTG+AGG | + | chr5_3:10449580-10449599 | None:intergenic | 45.0% | |
| CATTCACCTCATCAGTCTCT+TGG | + | chr5_3:10449908-10449927 | None:intergenic | 45.0% | |
| TAAGATCCTTTGGTTGCAGC+AGG | + | chr5_3:10450248-10450267 | None:intergenic | 45.0% | |
| !! | CAGGTTGGGTTTTCATACGA+CGG | - | chr5_3:10450272-10450291 | Msa0797990:intron | 45.0% |
| ! | GGGTTTTCATACGACGGAAA+TGG | - | chr5_3:10450278-10450297 | Msa0797990:intron | 45.0% |
| ! | ATGGGGTCAAAAGGTATGGT+TGG | - | chr5_3:10450420-10450439 | Msa0797990:intron | 45.0% |
| GGTGATCCTGCAATTGTAAG+TGG | - | chr5_3:10450503-10450522 | Msa0797990:intron | 45.0% | |
| GTAGAGGAAACTGAGTCGTA+AGG | - | chr5_3:10450618-10450637 | Msa0797990:intron | 45.0% | |
| GAGTCGTAAGGAAAGAAGGA+AGG | - | chr5_3:10450630-10450649 | Msa0797990:intron | 45.0% | |
| ATTGTGCTCCCACTGACAAA+TGG | - | chr5_3:10450783-10450802 | Msa0797990:intron | 45.0% | |
| TCCCACTGACAAATGGATAG+CGG | - | chr5_3:10450790-10450809 | Msa0797990:intron | 45.0% | |
| TCCGCTATCCATTTGTCAGT+GGG | + | chr5_3:10450794-10450813 | None:intergenic | 45.0% | |
| ATCCGCTATCCATTTGTCAG+TGG | + | chr5_3:10450795-10450814 | None:intergenic | 45.0% | |
| GGATAACGCATATGTGCTCA+AGG | + | chr5_3:10450929-10450948 | None:intergenic | 45.0% | |
| AATAACGCCTTGCATAGGAC+GGG | + | chr5_3:10451042-10451061 | None:intergenic | 45.0% | |
| GAATAACGCCTTGCATAGGA+CGG | + | chr5_3:10451043-10451062 | None:intergenic | 45.0% | |
| ! | CCTATGCAAGGCGTTATTCA+CGG | - | chr5_3:10451044-10451063 | Msa0797990:intron | 45.0% |
| ATAACTGAATTTGGGGGCTC+TGG | - | chr5_3:10451124-10451143 | Msa0797990:intron | 45.0% | |
| GGGAACATTGAGCTCCAAAT+AGG | + | chr5_3:10451388-10451407 | None:intergenic | 45.0% | |
| GATGACCTGCAATACAGTAG+AGG | + | chr5_3:10451474-10451493 | None:intergenic | 45.0% | |
| CTGTATTGCAGGTCATCATC+TGG | - | chr5_3:10451477-10451496 | Msa0797990:CDS | 45.0% | |
| ! | TGGGTGATGGTATACCTTAC+GGG | + | chr5_3:10451579-10451598 | None:intergenic | 45.0% |
| ! | ATTTGCACGAGCTTAGCTCT+GGG | + | chr5_3:10451794-10451813 | None:intergenic | 45.0% |
| GGCAGAGGAGACAATTTATC+GGG | + | chr5_3:10451874-10451893 | None:intergenic | 45.0% | |
| TGAGTATCTGACATTGGCAG+AGG | + | chr5_3:10451889-10451908 | None:intergenic | 45.0% | |
| GCAAAAGAATCAACCAGCTG+TGG | + | chr5_3:10452036-10452055 | None:intergenic | 45.0% | |
| AGAATACTGAGCCCTGCATT+TGG | + | chr5_3:10452098-10452117 | None:intergenic | 45.0% | |
| !! | TTAAAGGCAAGTGGTTCTGG+AGG | - | chr5_3:10452382-10452401 | Msa0797990:intron | 45.0% |
| !! | TAAAGGCAAGTGGTTCTGGA+GGG | - | chr5_3:10452383-10452402 | Msa0797990:intron | 45.0% |
| GGCTCTTAAAACCTCAACCA+GGG | - | chr5_3:10452404-10452423 | Msa0797990:intron | 45.0% | |
| GCTCTTAAAACCTCAACCAG+GGG | - | chr5_3:10452405-10452424 | Msa0797990:intron | 45.0% | |
| CACCCCAAGAGAGACTTAAA+AGG | - | chr5_3:10452440-10452459 | Msa0797990:intron | 45.0% | |
| ! | TCGCTCCTGTTCTCTTTTCT+TGG | + | chr5_3:10452607-10452626 | None:intergenic | 45.0% |
| GTAGAAGTCCAAGTAGAAGC+AGG | - | chr5_3:10452923-10452942 | Msa0797990:intron | 45.0% | |
| AGAAGTCCAAGTAGAAGCAG+GGG | - | chr5_3:10452925-10452944 | Msa0797990:intron | 45.0% | |
| ! | TTTCTTTTCCTGTGCCTCAG+AGG | - | chr5_3:10453085-10453104 | Msa0797990:CDS | 45.0% |
| TGATGAGGAGTAAACCTCTG+AGG | + | chr5_3:10453102-10453121 | None:intergenic | 45.0% | |
| TCAGGCTAAGAAACCGTTCA+AGG | - | chr5_3:10453159-10453178 | Msa0797990:five_prime_UTR | 45.0% | |
| ATTGCTCCCAAGTGGTTAGA+AGG | - | chr5_3:10453242-10453261 | Msa0797990:five_prime_UTR | 45.0% | |
| !!! | ATTATTATGTTTTTTTTTAA+AGG | + | chr5_3:10451971-10451990 | None:intergenic | 5.0% |
| AGGAAGGAAGATGTGGCATG+AGG | - | chr5_3:10447324-10447343 | Msa0797990:intron | 50.0% | |
| AGATGTGGCATGAGGCAAGA+AGG | - | chr5_3:10447332-10447351 | Msa0797990:intron | 50.0% | |
| CAAGCCACCGAAGATCAACA+AGG | - | chr5_3:10447505-10447524 | Msa0797990:CDS | 50.0% | |
| TCCCACTAAAAAGCCGGACA+AGG | + | chr5_3:10448447-10448466 | None:intergenic | 50.0% | |
| TTCCTCCGCCCTTTCTCTTT+GGG | - | chr5_3:10448551-10448570 | Msa0797990:intron | 50.0% | |
| GGTTTGCACCCCAAAGAGAA+AGG | + | chr5_3:10448563-10448582 | None:intergenic | 50.0% | |
| !! | CTTTGGGGTGCAAACCTAGT+TGG | - | chr5_3:10448567-10448586 | Msa0797990:intron | 50.0% |
| TTCCTCAGGATACCCTGGAA+TGG | - | chr5_3:10448711-10448730 | Msa0797990:intron | 50.0% | |
| TCCTCAGGATACCCTGGAAT+GGG | - | chr5_3:10448712-10448731 | Msa0797990:intron | 50.0% | |
| CACGCCCATCAAATCTGCAA+AGG | + | chr5_3:10448854-10448873 | None:intergenic | 50.0% | |
| CTAATCCCTGGATGTCAGGT+TGG | + | chr5_3:10449151-10449170 | None:intergenic | 50.0% | |
| ! | ATGTTGCAAAGCGTCCTCGT+CGG | + | chr5_3:10449219-10449238 | None:intergenic | 50.0% |
| CTGCTCCATTTGCATCAGAC+AGG | - | chr5_3:10449267-10449286 | Msa0797990:CDS | 50.0% | |
| CCCAACCTGTCTGATGCAAA+TGG | + | chr5_3:10449275-10449294 | None:intergenic | 50.0% | |
| GGAGTTCCCCTTGTTAGAGT+TGG | + | chr5_3:10449977-10449996 | None:intergenic | 50.0% | |
| TGAGGAAGACGAAGATGACG+AGG | - | chr5_3:10450334-10450353 | Msa0797990:intron | 50.0% | |
| CGAAGATGACGAGGATGATG+AGG | - | chr5_3:10450343-10450362 | Msa0797990:intron | 50.0% | |
| AGAGAGAGCGAGAAGCTACA+CGG | - | chr5_3:10450671-10450690 | Msa0797990:intron | 50.0% | |
| TGATGTAGCACACGAGTTCC+AGG | + | chr5_3:10450700-10450719 | None:intergenic | 50.0% | |
| TGGAACTCGTGTGCTACATC+AGG | - | chr5_3:10450699-10450718 | Msa0797990:intron | 50.0% | |
| ATAACGCCTTGCATAGGACG+GGG | + | chr5_3:10451041-10451060 | None:intergenic | 50.0% | |
| CCGTGAATAACGCCTTGCAT+AGG | + | chr5_3:10451047-10451066 | None:intergenic | 50.0% | |
| CTGGAGAAGCAGATGGAACT+AGG | - | chr5_3:10451143-10451162 | Msa0797990:intron | 50.0% | |
| GATGGAGGAGGCTTCCTATT+TGG | - | chr5_3:10451371-10451390 | Msa0797990:intron | 50.0% | |
| TTGCATGTCGATCCTGCTTC+TGG | - | chr5_3:10451516-10451535 | Msa0797990:CDS | 50.0% | |
| TCAACGGATACACCAGAAGC+AGG | + | chr5_3:10451531-10451550 | None:intergenic | 50.0% | |
| AAGTCTTGAAGCCACCCGTA+AGG | - | chr5_3:10451562-10451581 | Msa0797990:CDS | 50.0% | |
| GTGATGGTATACCTTACGGG+TGG | + | chr5_3:10451576-10451595 | None:intergenic | 50.0% | |
| !! | GCTCTGGGGATTGATGTGTA+CGG | + | chr5_3:10451779-10451798 | None:intergenic | 50.0% |
| !! | TTTGCACGAGCTTAGCTCTG+GGG | + | chr5_3:10451793-10451812 | None:intergenic | 50.0% |
| CATTTGCACGAGCTTAGCTC+TGG | + | chr5_3:10451795-10451814 | None:intergenic | 50.0% | |
| CACGAGGAGATGTGGGATAA+TGG | + | chr5_3:10452060-10452079 | None:intergenic | 50.0% | |
| CTGTGTACACGAGGAGATGT+GGG | + | chr5_3:10452067-10452086 | None:intergenic | 50.0% | |
| ACAGCACACTCTCCAAATGC+AGG | - | chr5_3:10452083-10452102 | Msa0797990:intron | 50.0% | |
| CAGCACACTCTCCAAATGCA+GGG | - | chr5_3:10452084-10452103 | Msa0797990:intron | 50.0% | |
| ! | CTTTTCCACAGCACACCTTC+AGG | - | chr5_3:10452343-10452362 | Msa0797990:intron | 50.0% |
| ! | TTTGCTAGTGCTGAGCCTGA+AGG | + | chr5_3:10452361-10452380 | None:intergenic | 50.0% |
| GGGCTCTTAAAACCTCAACC+AGG | - | chr5_3:10452403-10452422 | Msa0797990:intron | 50.0% | |
| TCTTTCTTCTCCCCTGGTTG+AGG | + | chr5_3:10452418-10452437 | None:intergenic | 50.0% | |
| GGTGTTTCTTTCTTCTCCCC+TGG | + | chr5_3:10452424-10452443 | None:intergenic | 50.0% | |
| AAAGAGAACAGGAGCGACAG+AGG | - | chr5_3:10452610-10452629 | Msa0797990:intron | 50.0% | |
| AACGACTGTAACTCCTGCTG+CGG | + | chr5_3:10452686-10452705 | None:intergenic | 50.0% | |
| !!! | GCCCTTGCTTTGTTTTCCTC+TGG | - | chr5_3:10452859-10452878 | Msa0797990:intron | 50.0% |
| ! | TAAGGAGAGCGTGAACGATG+CGG | + | chr5_3:10453036-10453055 | None:intergenic | 50.0% |
| CTCCTTATTCTCGTTCTCCC+AGG | - | chr5_3:10453049-10453068 | Msa0797990:CDS | 50.0% | |
| CACCTGGGAGAACGAGAATA+AGG | + | chr5_3:10453054-10453073 | None:intergenic | 50.0% | |
| GTGGCATGAGGCAAGAAGGT+CGG | - | chr5_3:10447336-10447355 | Msa0797990:intron | 55.0% | |
| GGCAAGAAGGTCGGAGAAGA+AGG | - | chr5_3:10447345-10447364 | Msa0797990:intron | 55.0% | |
| GAGCAGCGTCCATCATGTCA+TGG | + | chr5_3:10447372-10447391 | None:intergenic | 55.0% | |
| ! | GATCACCGCGACGTTTTGCA+AGG | + | chr5_3:10447423-10447442 | None:intergenic | 55.0% |
| CAAACTCTGCTGCCATACCC+TGG | - | chr5_3:10448303-10448322 | Msa0797990:intron | 55.0% | |
| GTTCCTCCGCCCTTTCTCTT+TGG | - | chr5_3:10448550-10448569 | Msa0797990:intron | 55.0% | |
| TCCTCCGCCCTTTCTCTTTG+GGG | - | chr5_3:10448552-10448571 | Msa0797990:intron | 55.0% | |
| TGCACCCCAAAGAGAAAGGG+CGG | + | chr5_3:10448559-10448578 | None:intergenic | 55.0% | |
| ! | TCCCATTCCAGGGTATCCTG+AGG | + | chr5_3:10448716-10448735 | None:intergenic | 55.0% |
| !! | AGCATCGGCGTAGAGGATGT+CGG | - | chr5_3:10448984-10449003 | Msa0797990:intron | 55.0% |
| ATCAGGCCAACCTGACATCC+AGG | - | chr5_3:10449142-10449161 | Msa0797990:intron | 55.0% | |
| TCAGGCCAACCTGACATCCA+GGG | - | chr5_3:10449143-10449162 | Msa0797990:intron | 55.0% | |
| TGCAAATGGAGCAGCAGCCT+TGG | + | chr5_3:10449261-10449280 | None:intergenic | 55.0% | |
| TCACAGCCTGCTGCAACCAA+AGG | - | chr5_3:10450239-10450258 | Msa0797990:intron | 55.0% | |
| CGAGAAGCTACACGGATACC+TGG | - | chr5_3:10450679-10450698 | Msa0797990:intron | 55.0% | |
| TGCTACATCAGGACCCCTAC+CGG | - | chr5_3:10450710-10450729 | Msa0797990:intron | 55.0% | |
| GCAGGTCAAGGTCCAGATCA+CGG | - | chr5_3:10451008-10451027 | Msa0797990:intron | 55.0% | |
| GCAGATGGAACTAGGCGTGA+AGG | - | chr5_3:10451151-10451170 | Msa0797990:intron | 55.0% | |
| ACTCGAGATGTGGGAGATCG+CGG | + | chr5_3:10451187-10451206 | None:intergenic | 55.0% | |
| CATTAAACCGGTCGGAGCAC+TGG | - | chr5_3:10451212-10451231 | Msa0797990:CDS | 55.0% | |
| TAAAGGTCCAGTGCTCCGAC+CGG | + | chr5_3:10451222-10451241 | None:intergenic | 55.0% | |
| TTGTCAGGGTAGCTGCCAAG+AGG | - | chr5_3:10451346-10451365 | Msa0797990:intron | 55.0% | |
| GGTAGCTGCCAAGAGGAAGA+TGG | - | chr5_3:10451353-10451372 | Msa0797990:intron | 55.0% | |
| AGCTGCCAAGAGGAAGATGG+AGG | - | chr5_3:10451356-10451375 | Msa0797990:intron | 55.0% | |
| TGCCAAGAGGAAGATGGAGG+AGG | - | chr5_3:10451359-10451378 | Msa0797990:intron | 55.0% | |
| AGCCTCCTCCATCTTCCTCT+TGG | + | chr5_3:10451364-10451383 | None:intergenic | 55.0% | |
| TGTGGACATGTCAGCCAAGG+GGG | + | chr5_3:10452018-10452037 | None:intergenic | 55.0% | |
| CTGTGGACATGTCAGCCAAG+GGG | + | chr5_3:10452019-10452038 | None:intergenic | 55.0% | |
| GCTGTGGACATGTCAGCCAA+GGG | + | chr5_3:10452020-10452039 | None:intergenic | 55.0% | |
| AGCTGTGGACATGTCAGCCA+AGG | + | chr5_3:10452021-10452040 | None:intergenic | 55.0% | |
| TTGGCTGACATGTCCACAGC+TGG | - | chr5_3:10452020-10452039 | Msa0797990:intron | 55.0% | |
| GCTGTGTACACGAGGAGATG+TGG | + | chr5_3:10452068-10452087 | None:intergenic | 55.0% | |
| ! | GAGAGTGTGCTGTGTACACG+AGG | + | chr5_3:10452076-10452095 | None:intergenic | 55.0% |
| GTTACAGTCGTTCCCCACCA+AGG | - | chr5_3:10452694-10452713 | Msa0797990:intron | 55.0% | |
| CTGGAACCCCTGCTTCTACT+TGG | + | chr5_3:10452934-10452953 | None:intergenic | 55.0% | |
| CAAGTTCTCGCTCCCGTTCT+CGG | - | chr5_3:10452965-10452984 | Msa0797990:CDS | 55.0% | |
| TGCGATTAGGGGACCGAGAA+CGG | + | chr5_3:10452981-10453000 | None:intergenic | 55.0% | |
| ACCGAGAACGGGTGCGATTA+GGG | + | chr5_3:10452993-10453012 | None:intergenic | 55.0% | |
| !! | GGAGTAAACCTCTGAGGCAC+AGG | + | chr5_3:10453096-10453115 | None:intergenic | 55.0% |
| GTATGCATGAAAGGCCAGCG+AGG | - | chr5_3:10453197-10453216 | Msa0797990:intron | 55.0% | |
| AGATTGCACACAAGCCTCGC+TGG | + | chr5_3:10453214-10453233 | None:intergenic | 55.0% | |
| ACTCTGCTGCCATACCCTGG+AGG | - | chr5_3:10448306-10448325 | Msa0797990:intron | 60.0% | |
| ACCCCAAAGAGAAAGGGCGG+AGG | + | chr5_3:10448556-10448575 | None:intergenic | 60.0% | |
| GGAGTCGAGTGTTACCGCTG+AGG | + | chr5_3:10449781-10449800 | None:intergenic | 60.0% | |
| CCTTGCATAGGACGGGGAGT+AGG | + | chr5_3:10451035-10451054 | None:intergenic | 60.0% | |
| CCTACTCCCCGTCCTATGCA+AGG | - | chr5_3:10451032-10451051 | Msa0797990:intron | 60.0% | |
| GTGGACATGTCAGCCAAGGG+GGG | + | chr5_3:10452017-10452036 | None:intergenic | 60.0% | |
| ! | CTGAGCCTGAAGGTGTGCTG+TGG | + | chr5_3:10452351-10452370 | None:intergenic | 60.0% |
| GCGATTAGGGGACCGAGAAC+GGG | + | chr5_3:10452980-10452999 | None:intergenic | 60.0% | |
| CCGAGAACGGGTGCGATTAG+GGG | + | chr5_3:10452992-10453011 | None:intergenic | 60.0% | |
| CCCCTAATCGCACCCGTTCT+CGG | - | chr5_3:10452989-10453008 | Msa0797990:CDS | 60.0% | |
| GACCGAGAACGGGTGCGATT+AGG | + | chr5_3:10452994-10453013 | None:intergenic | 60.0% | |
| TGCGAGAAGGGGACCGAGAA+CGG | + | chr5_3:10453005-10453024 | None:intergenic | 60.0% | |
| CGGAGAACGAGTGCGAGAAG+GGG | + | chr5_3:10453016-10453035 | None:intergenic | 60.0% | |
| GCGGAGAACGAGTGCGAGAA+GGG | + | chr5_3:10453017-10453036 | None:intergenic | 60.0% | |
| TGCGGAGAACGAGTGCGAGA+AGG | + | chr5_3:10453018-10453037 | None:intergenic | 60.0% | |
| CGGGGAGTAGGACCGTGATC+TGG | + | chr5_3:10451023-10451042 | None:intergenic | 65.0% | |
| !! | GGGGGCTCTGGAGAAGCAGA+TGG | - | chr5_3:10451136-10451155 | Msa0797990:intron | 65.0% |
| CGAGATGTGGGAGATCGCGG+TGG | + | chr5_3:10451184-10451203 | None:intergenic | 65.0% | |
| CCAAGGGGGGTCAGCTGGTA+AGG | + | chr5_3:10452004-10452023 | None:intergenic | 65.0% | |
| CCTTACCAGCTGACCCCCCT+TGG | - | chr5_3:10452001-10452020 | Msa0797990:intron | 65.0% | |
| GCGAGAAGGGGACCGAGAAC+GGG | + | chr5_3:10453004-10453023 | None:intergenic | 65.0% | |
| GTCAGCCAAGGGGGGTCAGC+TGG | + | chr5_3:10452009-10452028 | None:intergenic | 70.0% | |
| ! | ATAGGCGTCGCAGCCGCAGC+AGG | - | chr5_3:10452670-10452689 | Msa0797990:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 10447187 | 10453282 | 10447187 | ID=Msa0797990;Name=Msa0797990 |
| chr5_3 | mRNA | 10447187 | 10453282 | 10447187 | ID=Msa0797990-mRNA-1;Parent=Msa0797990;Name=Msa0797990-mRNA-1;_AED=0.20;_eAED=0.20;_QI=123|0.84|0.85|1|0.92|0.85|14|0|585 |
| chr5_3 | exon | 10447187 | 10447322 | 10447187 | ID=Msa0797990-mRNA-1:exon:4394;Parent=Msa0797990-mRNA-1 |
| chr5_3 | exon | 10447399 | 10447560 | 10447399 | ID=Msa0797990-mRNA-1:exon:4393;Parent=Msa0797990-mRNA-1 |
| chr5_3 | exon | 10447754 | 10447892 | 10447754 | ID=Msa0797990-mRNA-1:exon:4392;Parent=Msa0797990-mRNA-1 |
| chr5_3 | exon | 10447979 | 10448115 | 10447979 | ID=Msa0797990-mRNA-1:exon:4391;Parent=Msa0797990-mRNA-1 |
| chr5_3 | exon | 10448886 | 10448981 | 10448886 | ID=Msa0797990-mRNA-1:exon:4390;Parent=Msa0797990-mRNA-1 |
| chr5_3 | exon | 10449248 | 10449457 | 10449248 | ID=Msa0797990-mRNA-1:exon:4389;Parent=Msa0797990-mRNA-1 |
| chr5_3 | exon | 10449560 | 10449607 | 10449560 | ID=Msa0797990-mRNA-1:exon:4388;Parent=Msa0797990-mRNA-1 |
| chr5_3 | exon | 10449738 | 10449847 | 10449738 | ID=Msa0797990-mRNA-1:exon:4387;Parent=Msa0797990-mRNA-1 |
| chr5_3 | exon | 10449952 | 10450240 | 10449952 | ID=Msa0797990-mRNA-1:exon:4386;Parent=Msa0797990-mRNA-1 |
| chr5_3 | exon | 10451181 | 10451256 | 10451181 | ID=Msa0797990-mRNA-1:exon:4385;Parent=Msa0797990-mRNA-1 |
| chr5_3 | exon | 10451468 | 10451586 | 10451468 | ID=Msa0797990-mRNA-1:exon:4384;Parent=Msa0797990-mRNA-1 |
| chr5_3 | exon | 10451712 | 10451750 | 10451712 | ID=Msa0797990-mRNA-1:exon:4383;Parent=Msa0797990-mRNA-1 |
| chr5_3 | exon | 10452939 | 10453192 | 10452939 | ID=Msa0797990-mRNA-1:exon:4382;Parent=Msa0797990-mRNA-1 |
| chr5_3 | exon | 10453217 | 10453282 | 10453217 | ID=Msa0797990-mRNA-1:exon:4381;Parent=Msa0797990-mRNA-1 |
| chr5_3 | five_prime_UTR | 10453217 | 10453282 | 10453217 | ID=Msa0797990-mRNA-1:five_prime_utr;Parent=Msa0797990-mRNA-1 |
| chr5_3 | five_prime_UTR | 10453136 | 10453192 | 10453136 | ID=Msa0797990-mRNA-1:five_prime_utr;Parent=Msa0797990-mRNA-1 |
| chr5_3 | CDS | 10452939 | 10453135 | 10452939 | ID=Msa0797990-mRNA-1:cds;Parent=Msa0797990-mRNA-1 |
| chr5_3 | CDS | 10451712 | 10451750 | 10451712 | ID=Msa0797990-mRNA-1:cds;Parent=Msa0797990-mRNA-1 |
| chr5_3 | CDS | 10451468 | 10451586 | 10451468 | ID=Msa0797990-mRNA-1:cds;Parent=Msa0797990-mRNA-1 |
| chr5_3 | CDS | 10451181 | 10451256 | 10451181 | ID=Msa0797990-mRNA-1:cds;Parent=Msa0797990-mRNA-1 |
| chr5_3 | CDS | 10449952 | 10450240 | 10449952 | ID=Msa0797990-mRNA-1:cds;Parent=Msa0797990-mRNA-1 |
| chr5_3 | CDS | 10449738 | 10449847 | 10449738 | ID=Msa0797990-mRNA-1:cds;Parent=Msa0797990-mRNA-1 |
| chr5_3 | CDS | 10449560 | 10449607 | 10449560 | ID=Msa0797990-mRNA-1:cds;Parent=Msa0797990-mRNA-1 |
| chr5_3 | CDS | 10449248 | 10449457 | 10449248 | ID=Msa0797990-mRNA-1:cds;Parent=Msa0797990-mRNA-1 |
| chr5_3 | CDS | 10448886 | 10448981 | 10448886 | ID=Msa0797990-mRNA-1:cds;Parent=Msa0797990-mRNA-1 |
| chr5_3 | CDS | 10447979 | 10448115 | 10447979 | ID=Msa0797990-mRNA-1:cds;Parent=Msa0797990-mRNA-1 |
| chr5_3 | CDS | 10447754 | 10447892 | 10447754 | ID=Msa0797990-mRNA-1:cds;Parent=Msa0797990-mRNA-1 |
| chr5_3 | CDS | 10447399 | 10447560 | 10447399 | ID=Msa0797990-mRNA-1:cds;Parent=Msa0797990-mRNA-1 |
| chr5_3 | CDS | 10447187 | 10447322 | 10447187 | ID=Msa0797990-mRNA-1:cds;Parent=Msa0797990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
