AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0533400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0533400 MtrunA17_Chr4g0006991 94.737 437 13 1 1 437 1 427 0.0 852
Msa0533400 MtrunA17_Chr7g0242701 75.744 437 96 1 1 437 1 427 0.0 663
Msa0533400 MtrunA17_Chr5g0437601 42.058 447 219 7 1 437 8 424 7.87e-128 376
Msa0533400 MtrunA17_Chr8g0360521 44.208 423 206 7 16 437 16 409 3.09e-126 372
Msa0533400 MtrunA17_Chr3g0113671 47.191 356 176 3 84 437 104 449 1.03e-121 362
Msa0533400 MtrunA17_Chr3g0114101 41.084 443 236 7 2 437 6 430 4.88e-118 351
Msa0533400 MtrunA17_Chr5g0437291 45.556 360 181 4 83 437 162 511 6.54e-118 354
Msa0533400 MtrunA17_Chr4g0005481 42.680 403 202 4 35 437 73 446 9.10e-113 338
Msa0533400 MtrunA17_Chr4g0005491 45.278 360 177 7 85 437 61 407 2.76e-110 331
Msa0533400 MtrunA17_Chr7g0243301 43.454 359 185 6 85 437 63 409 1.68e-106 321
Msa0533400 MtrunA17_Chr1g0210771 40.896 357 177 9 84 437 57 382 3.14e-88 273
Msa0533400 MtrunA17_Chr3g0105301 38.764 356 192 7 86 437 43 376 4.04e-86 268
Msa0533400 MtrunA17_Chr1g0171171 38.418 354 189 8 84 437 51 375 4.55e-83 259
Msa0533400 MtrunA17_Chr5g0430371 37.190 363 196 9 86 437 58 399 2.94e-81 256
Msa0533400 MtrunA17_Chr3g0097891 36.134 357 196 7 81 437 26 350 1.10e-79 250
Msa0533400 MtrunA17_Chr7g0269991 37.604 359 189 10 86 437 137 467 9.42e-79 251
Msa0533400 MtrunA17_Chr4g0071391 36.288 361 202 8 84 437 107 446 6.41e-78 249
Msa0533400 MtrunA17_Chr5g0413271 36.658 371 210 9 68 437 130 476 1.08e-77 249
Msa0533400 MtrunA17_Chr4g0068111 35.246 366 205 9 82 437 110 453 5.93e-77 247
Msa0533400 MtrunA17_Chr7g0258851 37.673 361 197 10 85 437 247 587 5.48e-76 248
Msa0533400 MtrunA17_Chr1g0175671 37.396 361 198 10 85 437 169 509 2.32e-75 244
Msa0533400 MtrunA17_Chr2g0283581 36.338 355 185 10 86 437 42 358 5.24e-73 233
Msa0533400 MtrunA17_Chr1g0213281 35.912 362 201 11 86 437 175 515 2.03e-72 237
Msa0533400 MtrunA17_Chr5g0413851 36.648 352 189 9 86 437 42 359 2.92e-72 231
Msa0533400 MtrunA17_Chr2g0287901 36.559 372 199 10 79 437 90 437 8.30e-72 233
Msa0533400 MtrunA17_Chr4g0045941 34.943 352 195 8 86 437 33 350 9.28e-72 230
Msa0533400 MtrunA17_Chr4g0041011 34.375 352 196 8 86 437 47 363 1.42e-71 229
Msa0533400 MtrunA17_Chr4g0045951 35.795 352 192 9 86 437 45 362 6.32e-71 228
Msa0533400 MtrunA17_Chr2g0314801 34.085 355 201 8 84 437 31 353 1.07e-70 227
Msa0533400 MtrunA17_Chr3g0085071 33.799 358 195 9 84 437 44 363 2.22e-70 226
Msa0533400 MtrunA17_Chr2g0325481 34.561 353 196 9 85 437 49 366 3.41e-70 226
Msa0533400 MtrunA17_Chr3g0085081 34.078 358 194 11 84 437 29 348 9.82e-70 224
Msa0533400 MtrunA17_Chr3g0091031 33.799 358 195 11 84 437 29 348 1.71e-68 221
Msa0533400 MtrunA17_Chr2g0314791 35.000 360 187 10 84 437 27 345 2.15e-68 221
Msa0533400 MtrunA17_Chr3g0126021 32.037 437 246 11 14 437 61 459 3.02e-68 224
Msa0533400 MtrunA17_Chr8g0368461 34.316 373 206 9 84 437 176 528 2.05e-66 221
Msa0533400 MtrunA17_Chr7g0259711 33.787 367 207 8 84 437 89 432 9.70e-66 217
Msa0533400 MtrunA17_Chr8g0384151 30.939 362 209 8 84 437 88 416 8.83e-60 201
Msa0533400 MtrunA17_Chr1g0209921 36.179 246 135 7 84 327 42 267 2.48e-48 166
Msa0533400 MtrunA17_Chr1g0178081 31.733 375 149 15 84 437 53 341 2.44e-46 163
Msa0533400 MtrunA17_Chr5g0414051 29.659 381 226 14 75 437 64 420 7.94e-41 150
Msa0533400 MtrunA17_Chr5g0414091 29.443 377 215 15 84 437 83 431 7.65e-40 148
Msa0533400 MtrunA17_Chr8g0391481 29.067 375 218 14 84 437 25 372 5.42e-39 144
Msa0533400 MtrunA17_Chr5g0414061 28.804 368 225 11 85 437 93 438 1.19e-37 142
Msa0533400 MtrunA17_Chr3g0140371 29.155 367 221 14 86 437 18 360 8.74e-37 138
Msa0533400 MtrunA17_Chr6g0456691 28.054 442 265 16 12 437 15 419 8.28e-36 137
Msa0533400 MtrunA17_Chr7g0226991 28.533 368 225 12 86 437 57 402 1.22e-35 135
Msa0533400 MtrunA17_Chr8g0387921 24.429 438 279 14 19 437 15 419 6.36e-35 134
Msa0533400 MtrunA17_Chr8g0347321 26.027 438 272 15 28 437 26 439 7.51e-35 134
Msa0533400 MtrunA17_Chr2g0283851 28.684 380 207 16 87 437 56 400 1.82e-34 132
Msa0533400 MtrunA17_Chr5g0414041 27.926 376 228 13 81 437 82 433 5.46e-34 132
Msa0533400 MtrunA17_Chr6g0476041 25.137 366 242 10 86 437 167 514 1.30e-33 132
Msa0533400 MtrunA17_Chr6g0456681 29.891 368 219 13 86 437 64 408 2.07e-33 130
Msa0533400 MtrunA17_Chr4g0070341 27.626 438 254 18 31 437 66 471 7.84e-33 129
Msa0533400 MtrunA17_Chr4g0049421 27.346 373 222 13 86 437 48 392 8.27e-32 125
Msa0533400 MtrunA17_Chr8g0384421 26.882 372 224 16 84 437 131 472 4.93e-31 124
Msa0533400 MtrunA17_Chr6g0451321 26.027 365 234 11 86 437 116 457 5.03e-31 124
Msa0533400 MtrunA17_Chr1g0188191 25.269 372 234 15 86 437 234 581 2.91e-30 123
Msa0533400 MtrunA17_Chr6g0455901 27.733 375 223 15 84 437 69 416 6.44e-28 114
Msa0533400 MtrunA17_Chr7g0221271 28.959 221 136 5 5 223 4 205 1.35e-20 89.7
Msa0533400 MtrunA17_Chr7g0221291 31.579 190 101 7 5 188 4 170 1.03e-19 86.3
Msa0533400 MtrunA17_Chr3g0085101 39.286 112 60 2 289 397 1 107 1.67e-19 84.0
Msa0533400 MtrunA17_Chr2g0287931 38.136 118 66 1 156 266 1 118 2.97e-18 80.5
Msa0533400 MtrunA17_Chr5g0429191 55.319 47 18 1 384 430 2 45 5.89e-12 60.1
Msa0533400 MtrunA17_Chr1g0209931 35.714 98 47 3 340 437 11 92 6.55e-12 62.0
Msa0533400 MtrunA17_Chr7g0221281 25.207 242 154 8 210 437 8 236 1.83e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0533400 AT5G01360.1 65.057 435 132 5 11 437 12 434 0.0 593
Msa0533400 AT5G01360.2 71.154 364 94 2 75 437 25 378 0.0 570
Msa0533400 AT2G40150.1 46.631 371 170 6 80 437 65 420 2.51e-123 365
Msa0533400 AT3G55990.1 45.358 377 192 4 63 437 119 483 5.25e-123 366
Msa0533400 AT1G73140.1 47.658 363 172 4 76 437 60 405 6.12e-123 363
Msa0533400 AT2G40320.1 40.521 422 229 4 17 437 22 422 1.60e-119 355
Msa0533400 AT3G11030.1 45.098 357 183 4 83 437 103 448 7.32e-116 347
Msa0533400 AT2G40160.2 43.700 373 184 8 76 437 66 423 4.17e-111 334
Msa0533400 AT2G40160.1 43.902 369 181 8 76 433 66 419 5.81e-111 333
Msa0533400 AT5G01620.2 43.855 358 185 6 82 437 106 449 2.70e-107 325
Msa0533400 AT5G01620.1 43.855 358 185 6 82 437 106 449 2.70e-107 325
Msa0533400 AT5G01620.3 43.855 358 185 6 82 437 114 457 5.73e-107 324
Msa0533400 AT2G38320.1 38.303 436 223 10 9 437 8 404 7.15e-102 310
Msa0533400 AT2G38320.2 41.742 333 176 6 111 437 1 321 8.71e-90 276
Msa0533400 AT3G62390.1 38.227 361 191 10 84 437 136 471 3.81e-84 266
Msa0533400 AT5G58600.1 37.637 364 200 9 79 437 59 400 3.97e-84 264
Msa0533400 AT2G30900.1 38.259 379 194 13 63 437 23 365 1.28e-83 261
Msa0533400 AT5G20590.1 38.440 359 194 7 86 437 141 479 2.14e-83 265
Msa0533400 AT3G54260.1 37.465 355 188 8 86 437 51 374 1.50e-81 256
Msa0533400 AT1G78710.1 37.110 353 189 9 85 437 37 356 6.94e-81 254
Msa0533400 AT5G06700.1 38.889 360 192 9 86 437 255 594 2.51e-80 260
Msa0533400 AT3G12060.1 35.878 393 212 9 52 437 176 535 9.15e-79 254
Msa0533400 AT5G49340.1 37.363 364 194 11 86 437 100 441 2.59e-78 250
Msa0533400 AT2G34070.1 35.411 353 193 8 86 437 65 383 2.12e-77 246
Msa0533400 AT2G31110.2 36.056 355 189 10 85 437 44 362 2.69e-77 245
Msa0533400 AT1G29050.1 34.943 352 195 7 86 437 61 378 1.61e-74 238
Msa0533400 AT2G42570.1 33.889 360 204 9 78 437 39 364 7.37e-74 236
Msa0533400 AT2G30010.1 37.027 370 200 10 79 437 49 396 1.22e-73 236
Msa0533400 AT2G30010.2 37.027 370 200 10 79 437 92 439 2.68e-73 237
Msa0533400 AT2G40160.3 43.511 262 124 6 76 328 66 312 1.31e-72 231
Msa0533400 AT1G48880.1 34.530 362 192 9 85 437 114 439 9.93e-70 228
Msa0533400 AT3G14850.2 34.758 351 198 8 84 434 32 351 1.96e-68 221
Msa0533400 AT1G60790.1 33.422 377 222 10 71 437 175 532 2.32e-68 227
Msa0533400 AT3G06080.2 35.422 367 198 11 86 437 103 445 4.01e-67 221
Msa0533400 AT5G06230.2 34.037 379 192 12 84 437 19 364 9.18e-64 210
Msa0533400 AT5G06230.1 34.037 379 192 12 84 437 60 405 1.44e-63 211
Msa0533400 AT5G19160.1 33.875 369 204 10 86 437 99 444 2.53e-63 211
Msa0533400 AT3G62390.2 38.340 253 135 6 84 329 136 374 1.89e-57 195
Msa0533400 AT1G78710.2 32.011 353 154 10 85 437 30 296 2.62e-56 188
Msa0533400 AT3G11570.1 29.797 443 243 13 12 437 28 419 1.94e-54 187
Msa0533400 AT2G30900.2 37.638 271 143 9 63 330 23 270 2.80e-54 182
Msa0533400 AT5G58600.2 37.450 251 138 5 79 328 59 291 5.91e-54 182
Msa0533400 AT5G20590.2 37.903 248 135 4 86 326 141 376 2.82e-53 182
Msa0533400 AT2G34070.2 33.824 272 156 6 167 437 1 249 2.15e-52 176
Msa0533400 AT2G31110.3 36.287 237 128 6 85 319 44 259 3.53e-51 174
Msa0533400 AT5G19160.2 34.962 266 152 5 86 344 99 350 9.91e-47 164
Msa0533400 AT3G14850.1 33.582 268 158 6 167 434 1 248 1.04e-46 162
Msa0533400 AT3G06080.1 36.111 252 138 6 86 328 103 340 3.18e-46 163
Msa0533400 AT5G06230.3 33.585 265 137 8 84 328 60 305 7.42e-42 150
Msa0533400 AT2G31110.1 35.470 234 124 8 206 437 6 214 1.15e-41 147
Msa0533400 AT5G64020.1 28.796 382 212 17 86 437 57 408 2.22e-38 144
Msa0533400 AT5G64470.3 27.248 367 231 14 83 437 52 394 1.62e-37 141
Msa0533400 AT1G70230.1 28.065 367 223 12 82 437 75 411 5.48e-37 140
Msa0533400 AT5G64470.2 26.954 371 233 13 83 437 52 400 5.15e-36 137
Msa0533400 AT1G01430.1 26.776 366 239 11 85 437 98 447 1.91e-35 136
Msa0533400 AT4G23790.1 26.067 445 273 16 13 437 19 427 1.09e-34 134
Msa0533400 AT5G15890.1 26.914 405 235 13 54 437 158 522 1.74e-33 132
Msa0533400 AT2G14530.1 27.151 372 224 11 86 437 62 406 3.11e-33 129
Msa0533400 AT3G02440.1 27.100 369 225 13 86 437 127 468 1.24e-32 129
Msa0533400 AT3G02440.2 27.100 369 225 13 86 437 135 476 1.47e-32 129
Msa0533400 AT4G25360.1 26.448 397 256 11 59 437 146 524 4.61e-32 128
Msa0533400 AT4G25360.2 26.448 397 256 11 59 437 146 524 4.61e-32 128
Msa0533400 AT2G37720.1 27.749 382 204 17 86 437 143 482 1.35e-31 126
Msa0533400 AT5G51640.1 25.686 401 256 14 56 437 111 488 2.08e-31 126
Msa0533400 AT4G01080.1 26.171 363 226 12 85 432 90 425 2.36e-31 125
Msa0533400 AT5G20680.6 25.362 414 237 14 55 437 85 457 3.30e-31 125
Msa0533400 AT5G20680.4 25.362 414 237 14 55 437 179 551 4.29e-31 125
Msa0533400 AT5G20680.1 25.362 414 237 14 55 437 179 551 4.29e-31 125
Msa0533400 AT5G20680.3 25.362 414 237 14 55 437 179 551 4.29e-31 125
Msa0533400 AT5G20680.5 25.362 414 237 14 55 437 179 551 4.29e-31 125
Msa0533400 AT5G20680.2 25.362 414 237 14 55 437 161 533 4.34e-31 125
Msa0533400 AT4G11090.1 25.907 386 225 15 80 437 73 425 1.20e-29 120
Msa0533400 AT3G28150.1 26.613 372 229 14 82 437 67 410 3.24e-27 113
Msa0533400 AT5G15900.1 26.882 372 227 13 84 437 65 409 4.10e-26 110
Msa0533400 AT5G15900.2 26.882 372 227 13 84 437 84 428 4.35e-26 110
Msa0533400 AT5G64470.4 26.950 282 178 12 83 353 52 316 9.67e-21 92.8
Msa0533400 AT5G64470.1 26.736 288 184 12 83 359 52 323 1.69e-20 92.4

Find 81 sgRNAs with CRISPR-Local

Find 173 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGATTTGATGTGCTTTCT+AGG 0.201030 4_1:-8286674 None:intergenic
CTCATAGACTACTACATATT+TGG 0.211275 4_1:+8287538 Msa0533400:CDS
TCCTCAGTTTATAGTGAAAT+TGG 0.219607 4_1:+8289160 Msa0533400:CDS
TCAGAAACAATGAAGCTTCT+TGG 0.223944 4_1:+8286530 Msa0533400:CDS
TTCATTGATTTCTTCTTTGC+AGG 0.235261 4_1:-8287679 None:intergenic
GTTTGAGGACATGGGCAAAT+TGG 0.252413 4_1:+8288550 Msa0533400:CDS
TTAGCAACATTGCATTCTTC+TGG 0.260339 4_1:-8287154 None:intergenic
ACACTGATATTCATATAATA+GGG 0.270497 4_1:+8288177 Msa0533400:CDS
AATATTTGATTCCAAGTATC+AGG 0.272544 4_1:-8289259 None:intergenic
AACACTGATATTCATATAAT+AGG 0.276459 4_1:+8288176 Msa0533400:CDS
ATGGGAATCATTTGTTTGTT+TGG 0.277651 4_1:+8287642 Msa0533400:CDS
ATGCTACTATAGAATTCTAT+TGG 0.292225 4_1:+8288132 Msa0533400:CDS
ATGTGTCACAAATGTCTAAA+TGG 0.300180 4_1:+8289363 Msa0533400:three_prime_UTR
GTAATATTGATTACTGTTAC+TGG 0.301891 4_1:-8289106 None:intergenic
GCAATGTTGCTAATGGAAAA+TGG 0.307320 4_1:+8287164 Msa0533400:CDS
GAGAAATTGCACAGATAAAA+TGG 0.325890 4_1:+8289385 Msa0533400:three_prime_UTR
TGCCTGGTGTTCCTGATACT+TGG 0.327357 4_1:+8289248 Msa0533400:CDS
ATGCCTCATGGATTGATGAT+AGG 0.349686 4_1:+8287119 Msa0533400:CDS
ATGATTCTGATTATCTTCAT+TGG 0.353780 4_1:+8287275 Msa0533400:CDS
ATCTCTGAGTATAGAATTGA+TGG 0.356024 4_1:+8289133 Msa0533400:CDS
GAAGAATGCAATGTTGCTAA+TGG 0.374390 4_1:+8287157 Msa0533400:CDS
TGAGGCAAGGTACAATCTTC+TGG 0.376249 4_1:-8287307 None:intergenic
TGGGGAAGTGGTTCAAATAA+AGG 0.377385 4_1:+8289040 Msa0533400:CDS
GATGAAATAGCTTAATCTAT+TGG 0.386253 4_1:-8289475 None:intergenic
ACATCAATTGCTTACAACTT+AGG 0.388599 4_1:+8288528 Msa0533400:CDS
TTTGAGGACATGGGCAAATT+GGG 0.394132 4_1:+8288551 Msa0533400:CDS
GAAAATTGTTTATCTATGTA+TGG 0.394541 4_1:-8287232 None:intergenic
GAAACGAGGGCGTGTTCATT+CGG 0.399124 4_1:+8287699 Msa0533400:CDS
TGATTCTGATTATCTTCATT+GGG 0.401619 4_1:+8287276 Msa0533400:CDS
GGAAAGAGGTTGCTATTTGT+AGG 0.411041 4_1:+8287598 Msa0533400:CDS
TCATTTGTTTGTTTGGTTCA+AGG 0.425313 4_1:+8287649 Msa0533400:CDS
GAAAGAGACTTTGTATGTGC+AGG 0.426256 4_1:-8288627 None:intergenic
CAAATTGTGGTGATAATGAT+TGG 0.439320 4_1:-8286569 None:intergenic
TGTATACATTGGTGTTTGCC+TGG 0.446519 4_1:+8289232 Msa0533400:CDS
TGCTACTATAGAATTCTATT+GGG 0.453242 4_1:+8288133 Msa0533400:CDS
ACAACTTAGGTTTGAGGACA+TGG 0.459680 4_1:+8288541 Msa0533400:CDS
TCATTTAGCAATGGAGAAGA+AGG 0.463649 4_1:+8288489 Msa0533400:CDS
AAGAAGAATCATTGGGGAAG+TGG 0.464968 4_1:+8289028 Msa0533400:CDS
TGCACAGATAAAATGGTCAT+TGG 0.473364 4_1:+8289392 Msa0533400:three_prime_UTR
GTGTTGGACTCCACAAGAAA+TGG 0.485744 4_1:-8288158 None:intergenic
CTGATTATCTTCATTGGGAG+TGG 0.489689 4_1:+8287281 Msa0533400:CDS
AACAAACAAATGATTCCCAT+TGG 0.489762 4_1:-8287639 None:intergenic
TTGCTTACAACTTAGGTTTG+AGG 0.491498 4_1:+8288535 Msa0533400:CDS
TGTATACAATCAGCATTCAA+TGG 0.496978 4_1:-8289217 None:intergenic
TTCACTTCAAAGAAACCAAT+GGG 0.502786 4_1:+8287624 Msa0533400:CDS
AGAAGCTTCATTGTTTCTGA+AGG 0.506352 4_1:-8286527 None:intergenic
TTTCTTGTGTCAAGAATGGA+AGG 0.513133 4_1:+8287251 Msa0533400:CDS
TCAGTTTATAGTGAAATTGG+TGG 0.530392 4_1:+8289163 Msa0533400:CDS
TCTGAAGGGTTCATGAGGAA+TGG 0.538014 4_1:-8286512 None:intergenic
TATTATATGAATATCAGTGT+TGG 0.544599 4_1:-8288174 None:intergenic
TGGCAAATTGTTAACTGAAG+AGG 0.546250 4_1:+8289183 Msa0533400:CDS
GCTGATTGGGGAAACAAGAA+TGG 0.550187 4_1:+8288971 Msa0533400:CDS
ATTCACTTCAAAGAAACCAA+TGG 0.554552 4_1:+8287623 Msa0533400:CDS
AAAGAGACTTTGTATGTGCA+GGG 0.558009 4_1:-8288626 None:intergenic
CTATTGGGCACCATTTCTTG+TGG 0.559058 4_1:+8288148 Msa0533400:CDS
ATGATGAAATATTGTTGAGA+GGG 0.571444 4_1:-8286433 None:intergenic
GAAGCTTCATTGTTTCTGAA+GGG 0.571726 4_1:-8286526 None:intergenic
CAACTTAGGTTTGAGGACAT+GGG 0.573906 4_1:+8288542 Msa0533400:CDS
CACTGATATTCATATAATAG+GGG 0.588475 4_1:+8288178 Msa0533400:CDS
TTGTTTCTGAAGGGTTCATG+AGG 0.592229 4_1:-8286517 None:intergenic
GAGGACATGGGCAAATTGGG+TGG 0.596044 4_1:+8288554 Msa0533400:CDS
GATGATGAAATATTGTTGAG+AGG 0.598076 4_1:-8286434 None:intergenic
TTTGAATTTGAAAATTGAGG+TGG 0.604238 4_1:-8286645 None:intergenic
AATTGTTAACTGAAGAGGAA+AGG 0.606297 4_1:+8289188 Msa0533400:CDS
CAAAATGTTTCAATGAAACA+AGG 0.607414 4_1:+8288996 Msa0533400:CDS
TTCCAAGTATCAGGAACACC+AGG 0.609005 4_1:-8289250 None:intergenic
CATTTAGCAATGGAGAAGAA+GGG 0.611384 4_1:+8288490 Msa0533400:CDS
AGGTGGGGTTCATTTAGCAA+TGG 0.612390 4_1:+8288480 Msa0533400:intron
ACCTATGTTTGGTGGATGAG+TGG 0.613388 4_1:+8288284 Msa0533400:CDS
TCATTCGGTCTTCAAAGCCA+AGG 0.623097 4_1:+8287714 Msa0533400:CDS
ACCAATTTCACTATAAACTG+AGG 0.625420 4_1:-8289161 None:intergenic
CAATAGTCTTGTATGCTGAG+AGG 0.630162 4_1:+8286606 Msa0533400:CDS
TAATAGGGGATCCAAAGAAG+AGG 0.630639 4_1:+8288192 Msa0533400:CDS
GAATAGAAGAATACAAATTG+TGG 0.634820 4_1:-8286582 None:intergenic
TGAGAAAACTTACTGAGGCA+AGG 0.635156 4_1:-8287320 None:intergenic
ACCACTCATCCACCAAACAT+AGG 0.637859 4_1:-8288285 None:intergenic
TGAATGCTGATTGTATACAT+TGG 0.661517 4_1:+8289221 Msa0533400:CDS
AGAAGAAATCAATGAAACGA+GGG 0.668954 4_1:+8287686 Msa0533400:CDS
AAGAGACTTTGTATGTGCAG+GGG 0.678323 4_1:-8288625 None:intergenic
AAGAAGAAATCAATGAAACG+AGG 0.699109 4_1:+8287685 Msa0533400:CDS
AAACCTATCATCAATCCATG+AGG 0.704633 4_1:-8287122 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTTTATTTTTTGAGT+AGG - chr4_1:8286406-8286425 None:intergenic 10.0%
!! ATTATAACCTTAATTATTAT+CGG + chr4_1:8286810-8286829 Msa0533400:intron 10.0%
!!! ATATTTTCTCAAATTTTTAA+TGG + chr4_1:8287431-8287450 Msa0533400:intron 10.0%
!!! CTTTTTAGTTTATGTTTTAA+GGG - chr4_1:8286951-8286970 None:intergenic 15.0%
!!! TGTTTTGAATTTGAAAATTG+AGG - chr4_1:8286651-8286670 None:intergenic 20.0%
!!! CCTTTTTAGTTTATGTTTTA+AGG - chr4_1:8286952-8286971 None:intergenic 20.0%
!! CCTTAAAACATAAACTAAAA+AGG + chr4_1:8286949-8286968 Msa0533400:intron 20.0%
!! AATTGGTAAAGAAAAAACAA+AGG - chr4_1:8287040-8287059 None:intergenic 20.0%
!! TACATTATTAAGAGTCAAAT+TGG - chr4_1:8287057-8287076 None:intergenic 20.0%
!! GAAAATTGTTTATCTATGTA+TGG - chr4_1:8287235-8287254 None:intergenic 20.0%
!!! TTCATTTTATTCATCTTGTA+TGG + chr4_1:8287357-8287376 Msa0533400:intron 20.0%
!!! TCAGGTTTTCTAATTAAAAT+TGG + chr4_1:8287795-8287814 Msa0533400:intron 20.0%
!!! GTTTTCTAATTAAAATTGGA+CGG + chr4_1:8287799-8287818 Msa0533400:intron 20.0%
!!! TTAAATACAAGAAAAGTACT+AGG + chr4_1:8288041-8288060 Msa0533400:intron 20.0%
!! TATTATATGAATATCAGTGT+TGG - chr4_1:8288177-8288196 None:intergenic 20.0%
!! AACACTGATATTCATATAAT+AGG + chr4_1:8288176-8288195 Msa0533400:CDS 20.0%
!! ACACTGATATTCATATAATA+GGG + chr4_1:8288177-8288196 Msa0533400:CDS 20.0%
!!! TACTTGATCTTTTTTCTTTA+TGG + chr4_1:8288377-8288396 Msa0533400:intron 20.0%
!!! TTCATCAACATTTTATCTTT+AGG + chr4_1:8288409-8288428 Msa0533400:intron 20.0%
!!! AAGATCACAATTTAAAATGT+AGG + chr4_1:8288460-8288479 Msa0533400:intron 20.0%
!! AGTAAAAAAGAAGAATCATT+GGG + chr4_1:8289021-8289040 Msa0533400:CDS 20.0%
!!! TTTCATTTTCTTGATAACTT+TGG - chr4_1:8289083-8289102 None:intergenic 20.0%
!!! AAACTTTTGTTAATCTAGAA+AGG + chr4_1:8289429-8289448 Msa0533400:three_prime_UTR 20.0%
!!! AACTTTTGTTAATCTAGAAA+GGG + chr4_1:8289430-8289449 Msa0533400:three_prime_UTR 20.0%
! ATGATGAAATATTGTTGAGA+GGG - chr4_1:8286436-8286455 None:intergenic 25.0%
! GAATAGAAGAATACAAATTG+TGG - chr4_1:8286585-8286604 None:intergenic 25.0%
! TTTGAATTTGAAAATTGAGG+TGG - chr4_1:8286648-8286667 None:intergenic 25.0%
! TCACTTTCCGATAATAATTA+AGG - chr4_1:8286820-8286839 None:intergenic 25.0%
! AAACATAAACTAAAAAGGAG+CGG + chr4_1:8286954-8286973 Msa0533400:intron 25.0%
!! AGAATATGATGAGATAGTTT+TGG - chr4_1:8287006-8287025 None:intergenic 25.0%
!! CAACTTTTATCTGAGTATAA+AGG - chr4_1:8287211-8287230 None:intergenic 25.0%
! ATGATTCTGATTATCTTCAT+TGG + chr4_1:8287275-8287294 Msa0533400:CDS 25.0%
! TGATTCTGATTATCTTCATT+GGG + chr4_1:8287276-8287295 Msa0533400:CDS 25.0%
! AAGATGAATAAAATGAACAC+TGG - chr4_1:8287354-8287373 None:intergenic 25.0%
!!! TCATATTCTAAGATTGAACA+CGG - chr4_1:8287826-8287845 None:intergenic 25.0%
!! GCTTTTATTGTTCAATTTCA+AGG - chr4_1:8288071-8288090 None:intergenic 25.0%
! ATGCTACTATAGAATTCTAT+TGG + chr4_1:8288132-8288151 Msa0533400:CDS 25.0%
! TGCTACTATAGAATTCTATT+GGG + chr4_1:8288133-8288152 Msa0533400:CDS 25.0%
! CACTGATATTCATATAATAG+GGG + chr4_1:8288178-8288197 Msa0533400:CDS 25.0%
!! ACTTTTATTATCCTCTTCTT+TGG - chr4_1:8288206-8288225 None:intergenic 25.0%
!! TTGTTTTCAATACCTATGTT+TGG + chr4_1:8288273-8288292 Msa0533400:CDS 25.0%
!! ATCACAATTTAAAATGTAGG+TGG + chr4_1:8288463-8288482 Msa0533400:intron 25.0%
!! TCACAATTTAAAATGTAGGT+GGG + chr4_1:8288464-8288483 Msa0533400:intron 25.0%
! CAAAATGTTTCAATGAAACA+AGG + chr4_1:8288996-8289015 Msa0533400:CDS 25.0%
!!! CAATGATTCTTCTTTTTTAC+TGG - chr4_1:8289022-8289041 None:intergenic 25.0%
! CAGTAAAAAAGAAGAATCAT+TGG + chr4_1:8289020-8289039 Msa0533400:CDS 25.0%
! GTAAAAAAGAAGAATCATTG+GGG + chr4_1:8289022-8289041 Msa0533400:CDS 25.0%
!! GTAATATTGATTACTGTTAC+TGG - chr4_1:8289109-8289128 None:intergenic 25.0%
! AATATTTGATTCCAAGTATC+AGG - chr4_1:8289262-8289281 None:intergenic 25.0%
! GATGAAATAGCTTAATCTAT+TGG - chr4_1:8289478-8289497 None:intergenic 25.0%
GATGATGAAATATTGTTGAG+AGG - chr4_1:8286437-8286456 None:intergenic 30.0%
! CAAATTGTGGTGATAATGAT+TGG - chr4_1:8286572-8286591 None:intergenic 30.0%
!! TTTGATTTGATGTGCTTTCT+AGG - chr4_1:8286677-8286696 None:intergenic 30.0%
! TCAATTTTTCTGTCATCTGT+TGG - chr4_1:8287085-8287104 None:intergenic 30.0%
AACAGATGACAGAAAAATTG+AGG + chr4_1:8287084-8287103 Msa0533400:intron 30.0%
! CAATTTTCTTGTGTCAAGAA+TGG + chr4_1:8287247-8287266 Msa0533400:CDS 30.0%
TGAATAAAATGAACACTGGT+TGG - chr4_1:8287350-8287369 None:intergenic 30.0%
TGCTTAATTTAGGTCAAAAG+TGG - chr4_1:8287513-8287532 None:intergenic 30.0%
! ATGAGAATGCTGCTTAATTT+AGG - chr4_1:8287523-8287542 None:intergenic 30.0%
CTCATAGACTACTACATATT+TGG + chr4_1:8287538-8287557 Msa0533400:CDS 30.0%
ATTCACTTCAAAGAAACCAA+TGG + chr4_1:8287623-8287642 Msa0533400:CDS 30.0%
TTCACTTCAAAGAAACCAAT+GGG + chr4_1:8287624-8287643 Msa0533400:CDS 30.0%
AACAAACAAATGATTCCCAT+TGG - chr4_1:8287642-8287661 None:intergenic 30.0%
ATGGGAATCATTTGTTTGTT+TGG + chr4_1:8287642-8287661 Msa0533400:CDS 30.0%
! TCATTTGTTTGTTTGGTTCA+AGG + chr4_1:8287649-8287668 Msa0533400:CDS 30.0%
!! TTCATTGATTTCTTCTTTGC+AGG - chr4_1:8287682-8287701 None:intergenic 30.0%
AAGAAGAAATCAATGAAACG+AGG + chr4_1:8287685-8287704 Msa0533400:CDS 30.0%
AGAAGAAATCAATGAAACGA+GGG + chr4_1:8287686-8287705 Msa0533400:CDS 30.0%
AAGCTAAATTCCAATTACCT+TGG - chr4_1:8287734-8287753 None:intergenic 30.0%
! TGTGACTATTTTCTACTACA+TGG - chr4_1:8287757-8287776 None:intergenic 30.0%
!! CATATTCTAAGATTGAACAC+GGG - chr4_1:8287825-8287844 None:intergenic 30.0%
! TGTGTATTTTCATGTCATCT+AGG + chr4_1:8288103-8288122 Msa0533400:intron 30.0%
! TTTTCAATACCTATGTTTGG+TGG + chr4_1:8288276-8288295 Msa0533400:CDS 30.0%
! CACAATTTAAAATGTAGGTG+GGG + chr4_1:8288465-8288484 Msa0533400:intron 30.0%
ACATCAATTGCTTACAACTT+AGG + chr4_1:8288528-8288547 Msa0533400:CDS 30.0%
!!! AAGAAGACTCTAGTTTTGTT+TGG - chr4_1:8288594-8288613 None:intergenic 30.0%
TAATTTCACTACGCTATAGT+GGG + chr4_1:8288844-8288863 Msa0533400:intron 30.0%
AATGTAGTGTTGTCAAATAG+CGG - chr4_1:8288892-8288911 None:intergenic 30.0%
ATCTCTGAGTATAGAATTGA+TGG + chr4_1:8289133-8289152 Msa0533400:CDS 30.0%
TCCTCAGTTTATAGTGAAAT+TGG + chr4_1:8289160-8289179 Msa0533400:CDS 30.0%
ACCAATTTCACTATAAACTG+AGG - chr4_1:8289164-8289183 None:intergenic 30.0%
TCAGTTTATAGTGAAATTGG+TGG + chr4_1:8289163-8289182 Msa0533400:CDS 30.0%
AATTGTTAACTGAAGAGGAA+AGG + chr4_1:8289188-8289207 Msa0533400:CDS 30.0%
TGTATACAATCAGCATTCAA+TGG - chr4_1:8289220-8289239 None:intergenic 30.0%
! TGAATGCTGATTGTATACAT+TGG + chr4_1:8289221-8289240 Msa0533400:CDS 30.0%
CATCTTCATGTCACAAAAAA+GGG - chr4_1:8289318-8289337 None:intergenic 30.0%
ACATCTTCATGTCACAAAAA+AGG - chr4_1:8289319-8289338 None:intergenic 30.0%
ATGTGTCACAAATGTCTAAA+TGG + chr4_1:8289363-8289382 Msa0533400:three_prime_UTR 30.0%
GAGAAATTGCACAGATAAAA+TGG + chr4_1:8289385-8289404 Msa0533400:three_prime_UTR 30.0%
!! GAAGCTTCATTGTTTCTGAA+GGG - chr4_1:8286529-8286548 None:intergenic 35.0%
!! AGAAGCTTCATTGTTTCTGA+AGG - chr4_1:8286530-8286549 None:intergenic 35.0%
TCAGAAACAATGAAGCTTCT+TGG + chr4_1:8286530-8286549 Msa0533400:CDS 35.0%
TGACAGAAAAATTGAGGATG+TGG + chr4_1:8287090-8287109 Msa0533400:CDS 35.0%
!!! ATGTGGTTTTAAATGCCTCA+TGG + chr4_1:8287107-8287126 Msa0533400:CDS 35.0%
AAACCTATCATCAATCCATG+AGG - chr4_1:8287125-8287144 None:intergenic 35.0%
TTAGCAACATTGCATTCTTC+TGG - chr4_1:8287157-8287176 None:intergenic 35.0%
GAAGAATGCAATGTTGCTAA+TGG + chr4_1:8287157-8287176 Msa0533400:CDS 35.0%
GCAATGTTGCTAATGGAAAA+TGG + chr4_1:8287164-8287183 Msa0533400:CDS 35.0%
TTTCTTGTGTCAAGAATGGA+AGG + chr4_1:8287251-8287270 Msa0533400:CDS 35.0%
! CTTTCCTTCAAGCTTTTTGA+GGG - chr4_1:8287584-8287603 None:intergenic 35.0%
! TCTTTCCTTCAAGCTTTTTG+AGG - chr4_1:8287585-8287604 None:intergenic 35.0%
TCAAAAAGCTTGAAGGAAAG+AGG + chr4_1:8287584-8287603 Msa0533400:CDS 35.0%
ATCTAACCTTTCTATACAGC+AGG + chr4_1:8287954-8287973 Msa0533400:intron 35.0%
TCATTTAGCAATGGAGAAGA+AGG + chr4_1:8288489-8288508 Msa0533400:CDS 35.0%
CATTTAGCAATGGAGAAGAA+GGG + chr4_1:8288490-8288509 Msa0533400:CDS 35.0%
TTGCTTACAACTTAGGTTTG+AGG + chr4_1:8288535-8288554 Msa0533400:CDS 35.0%
AAAGAGACTTTGTATGTGCA+GGG - chr4_1:8288629-8288648 None:intergenic 35.0%
TCGTACTAAATAGCGAATCA+TGG + chr4_1:8288803-8288822 Msa0533400:intron 35.0%
CGTACTAAATAGCGAATCAT+GGG + chr4_1:8288804-8288823 Msa0533400:intron 35.0%
CTAATTTCACTACGCTATAG+TGG + chr4_1:8288843-8288862 Msa0533400:intron 35.0%
TTGTCAAATAGCGGTTATAG+CGG - chr4_1:8288883-8288902 None:intergenic 35.0%
!!! TGTTTTTCAGAAGTGCTGAT+TGG + chr4_1:8288957-8288976 Msa0533400:intron 35.0%
!!! GTTTTTCAGAAGTGCTGATT+GGG + chr4_1:8288958-8288977 Msa0533400:intron 35.0%
!!! TTTTTCAGAAGTGCTGATTG+GGG + chr4_1:8288959-8288978 Msa0533400:intron 35.0%
TGGCAAATTGTTAACTGAAG+AGG + chr4_1:8289183-8289202 Msa0533400:CDS 35.0%
TGCACAGATAAAATGGTCAT+TGG + chr4_1:8289392-8289411 Msa0533400:three_prime_UTR 35.0%
!! TTGTTTCTGAAGGGTTCATG+AGG - chr4_1:8286520-8286539 None:intergenic 40.0%
!! CAATAGTCTTGTATGCTGAG+AGG + chr4_1:8286606-8286625 Msa0533400:CDS 40.0%
! ATGCCTCATGGATTGATGAT+AGG + chr4_1:8287119-8287138 Msa0533400:CDS 40.0%
CTGATTATCTTCATTGGGAG+TGG + chr4_1:8287281-8287300 Msa0533400:CDS 40.0%
TGAGAAAACTTACTGAGGCA+AGG - chr4_1:8287323-8287342 None:intergenic 40.0%
GAGTGTGAGAAAACTTACTG+AGG - chr4_1:8287328-8287347 None:intergenic 40.0%
TGTATGGCACACCAATACTT+TGG + chr4_1:8287373-8287392 Msa0533400:intron 40.0%
!! CACACCAATACTTTGGAGTT+CGG + chr4_1:8287380-8287399 Msa0533400:intron 40.0%
TAAGCCGAACTCCAAAGTAT+TGG - chr4_1:8287387-8287406 None:intergenic 40.0%
CGACATATAAGTGTCATGTC+TGG + chr4_1:8287457-8287476 Msa0533400:intron 40.0%
CATATAAGTGTCATGTCTGG+TGG + chr4_1:8287460-8287479 Msa0533400:intron 40.0%
ATAGCCCTCAAAAAGCTTGA+AGG + chr4_1:8287577-8287596 Msa0533400:CDS 40.0%
!! GGAAAGAGGTTGCTATTTGT+AGG + chr4_1:8287598-8287617 Msa0533400:CDS 40.0%
GTCTTCAAAGCCAAGGTAAT+TGG + chr4_1:8287721-8287740 Msa0533400:intron 40.0%
TTGTCGTAGTCATGCAATTC+AGG + chr4_1:8287777-8287796 Msa0533400:intron 40.0%
GTCATCTGAACTGAATCGAA+AGG - chr4_1:8287913-8287932 None:intergenic 40.0%
TTCAGATGACTCGAATTGCA+TGG + chr4_1:8287923-8287942 Msa0533400:intron 40.0%
AGATTGCCTGCTGTATAGAA+AGG - chr4_1:8287963-8287982 None:intergenic 40.0%
TTTCTATACAGCAGGCAATC+TGG + chr4_1:8287962-8287981 Msa0533400:intron 40.0%
TAATAGGGGATCCAAAGAAG+AGG + chr4_1:8288192-8288211 Msa0533400:CDS 40.0%
TTACTGAGCGTGCCAAAAAT+TGG + chr4_1:8288234-8288253 Msa0533400:CDS 40.0%
! ATCAGCTCCTGTCCAATTTT+TGG - chr4_1:8288249-8288268 None:intergenic 40.0%
AAGTAAGTAGATAGCCAGGT+AGG - chr4_1:8288348-8288367 None:intergenic 40.0%
CTACAAGTAAGTAGATAGCC+AGG - chr4_1:8288352-8288371 None:intergenic 40.0%
CTGGCTATCTACTTACTTGT+AGG + chr4_1:8288350-8288369 Msa0533400:intron 40.0%
ACAACTTAGGTTTGAGGACA+TGG + chr4_1:8288541-8288560 Msa0533400:CDS 40.0%
CAACTTAGGTTTGAGGACAT+GGG + chr4_1:8288542-8288561 Msa0533400:CDS 40.0%
TTTGAGGACATGGGCAAATT+GGG + chr4_1:8288551-8288570 Msa0533400:CDS 40.0%
AAGAGACTTTGTATGTGCAG+GGG - chr4_1:8288628-8288647 None:intergenic 40.0%
GAAAGAGACTTTGTATGTGC+AGG - chr4_1:8288630-8288649 None:intergenic 40.0%
AAGAAGAATCATTGGGGAAG+TGG + chr4_1:8289028-8289047 Msa0533400:CDS 40.0%
TGGGGAAGTGGTTCAAATAA+AGG + chr4_1:8289040-8289059 Msa0533400:CDS 40.0%
! TGTATACATTGGTGTTTGCC+TGG + chr4_1:8289232-8289251 Msa0533400:CDS 40.0%
TCTGAAGGGTTCATGAGGAA+TGG - chr4_1:8286515-8286534 None:intergenic 45.0%
TGAGGCAAGGTACAATCTTC+TGG - chr4_1:8287310-8287329 None:intergenic 45.0%
TTGGAGTTCGGCTTAACATG+TGG + chr4_1:8287392-8287411 Msa0533400:intron 45.0%
!! AGCTTTTTGAGGGCTATCTC+TGG - chr4_1:8287574-8287593 None:intergenic 45.0%
TCATTCGGTCTTCAAAGCCA+AGG + chr4_1:8287714-8287733 Msa0533400:CDS 45.0%
CTATTGGGCACCATTTCTTG+TGG + chr4_1:8288148-8288167 Msa0533400:CDS 45.0%
GTGTTGGACTCCACAAGAAA+TGG - chr4_1:8288161-8288180 None:intergenic 45.0%
! ACCTATGTTTGGTGGATGAG+TGG + chr4_1:8288284-8288303 Msa0533400:CDS 45.0%
ACCACTCATCCACCAAACAT+AGG - chr4_1:8288288-8288307 None:intergenic 45.0%
AAGTAGATAGCCAGGTAGGT+AGG - chr4_1:8288344-8288363 None:intergenic 45.0%
AGGTGGGGTTCATTTAGCAA+TGG + chr4_1:8288480-8288499 Msa0533400:intron 45.0%
GTTTGAGGACATGGGCAAAT+TGG + chr4_1:8288550-8288569 Msa0533400:CDS 45.0%
GCTGATTGGGGAAACAAGAA+TGG + chr4_1:8288971-8288990 Msa0533400:CDS 45.0%
TTCCAAGTATCAGGAACACC+AGG - chr4_1:8289253-8289272 None:intergenic 45.0%
!! AATAATATAATAAATAACTA+AGG + chr4_1:8286851-8286870 Msa0533400:intron 5.0%
!! ACAAAAAAAAAAAAAAAAAA+TGG + chr4_1:8288714-8288733 Msa0533400:intron 5.0%
! GAAACGAGGGCGTGTTCATT+CGG + chr4_1:8287699-8287718 Msa0533400:CDS 50.0%
GAGCGTGCCAAAAATTGGAC+AGG + chr4_1:8288239-8288258 Msa0533400:CDS 50.0%
CCAGGTAGGTAGGTATGAAG+AGG - chr4_1:8288334-8288353 None:intergenic 50.0%
CCTCTTCATACCTACCTACC+TGG + chr4_1:8288331-8288350 Msa0533400:intron 50.0%
TAGCGGTTATAGCGGCAGTA+TGG - chr4_1:8288875-8288894 None:intergenic 50.0%
TGCCTGGTGTTCCTGATACT+TGG + chr4_1:8289248-8289267 Msa0533400:CDS 50.0%
ATGTCTGGTGGCTGTGTCAG+CGG + chr4_1:8287472-8287491 Msa0533400:intron 55.0%
GAGGACATGGGCAAATTGGG+TGG + chr4_1:8288554-8288573 Msa0533400:CDS 55.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 8286390 8289501 8286390 ID=Msa0533400;Name=Msa0533400
chr4_1 mRNA 8286390 8289501 8286390 ID=Msa0533400-mRNA-1;Parent=Msa0533400;Name=Msa0533400-mRNA-1;_AED=0.07;_eAED=0.07;_QI=131|0.8|0.83|1|1|1|6|204|437
chr4_1 exon 8286390 8286701 8286390 ID=Msa0533400-mRNA-1:exon:2781;Parent=Msa0533400-mRNA-1
chr4_1 exon 8287089 8287329 8287089 ID=Msa0533400-mRNA-1:exon:2782;Parent=Msa0533400-mRNA-1
chr4_1 exon 8287534 8287735 8287534 ID=Msa0533400-mRNA-1:exon:2783;Parent=Msa0533400-mRNA-1
chr4_1 exon 8288125 8288324 8288125 ID=Msa0533400-mRNA-1:exon:2784;Parent=Msa0533400-mRNA-1
chr4_1 exon 8288482 8288640 8288482 ID=Msa0533400-mRNA-1:exon:2785;Parent=Msa0533400-mRNA-1
chr4_1 exon 8288967 8289501 8288967 ID=Msa0533400-mRNA-1:exon:2786;Parent=Msa0533400-mRNA-1
chr4_1 five_prime_UTR 8286390 8286520 8286390 ID=Msa0533400-mRNA-1:five_prime_utr;Parent=Msa0533400-mRNA-1
chr4_1 CDS 8286521 8286701 8286521 ID=Msa0533400-mRNA-1:cds;Parent=Msa0533400-mRNA-1
chr4_1 CDS 8287089 8287329 8287089 ID=Msa0533400-mRNA-1:cds;Parent=Msa0533400-mRNA-1
chr4_1 CDS 8287534 8287735 8287534 ID=Msa0533400-mRNA-1:cds;Parent=Msa0533400-mRNA-1
chr4_1 CDS 8288125 8288324 8288125 ID=Msa0533400-mRNA-1:cds;Parent=Msa0533400-mRNA-1
chr4_1 CDS 8288482 8288640 8288482 ID=Msa0533400-mRNA-1:cds;Parent=Msa0533400-mRNA-1
chr4_1 CDS 8288967 8289297 8288967 ID=Msa0533400-mRNA-1:cds;Parent=Msa0533400-mRNA-1
chr4_1 three_prime_UTR 8289298 8289501 8289298 ID=Msa0533400-mRNA-1:three_prime_utr;Parent=Msa0533400-mRNA-1
Gene Sequence

>Msa0533400

ATGAACCCTTCAGAAACAATGAAGCTTCTTGGAAAAAAGCTTTCTTTTCCAATCATTATCACCACAATTTGTATTCTTCTATTCACAATAGTCTTGTATGCTGAGAGGCTTAGTTTCATTTCTTCCACCTCAATTTTCAAATTCAAAACATGTCCTAGAAAGCACATCAAATCAAAATCTAATGACAGAAAAATTGAGGATGTGGTTTTAAATGCCTCATGGATTGATGATAGGTTTGATTTTGATCCAGAAGAATGCAATGTTGCTAATGGAAAATGGATATTTAACAATACAATCAAGCCTTTATACTCAGATAAAAGTTGTCCATACATAGATAAACAATTTTCTTGTGTCAAGAATGGAAGGAATGATTCTGATTATCTTCATTGGGAGTGGCAGCCAGAAGATTGTACCTTGCCTCACATTCTCATAGACTACTACATATTTGGTAGATTTAATCCAGAGATAGCCCTCAAAAAGCTTGAAGGAAAGAGGTTGCTATTTGTAGGAGATTCACTTCAAAGAAACCAATGGGAATCATTTGTTTGTTTGGTTCAAGGTATCATACCTGCAAAGAAGAAATCAATGAAACGAGGGCGTGTTCATTCGGTCTTCAAAGCCAAGGAATATAATGCTACTATAGAATTCTATTGGGCACCATTTCTTGTGGAGTCCAACACTGATATTCATATAATAGGGGATCCAAAGAAGAGGATAATAAAAGTTGATGAAATTACTGAGCGTGCCAAAAATTGGACAGGAGCTGATATACTTGTTTTCAATACCTATGTTTGGTGGATGAGTGGTCTTAGAGTTAAAGCATTGTGGGGTTCATTTAGCAATGGAGAAGAAGGGTATGAAGAACTTGATACATCAATTGCTTACAACTTAGGTTTGAGGACATGGGCAAATTGGGTGGACTCAACTATCAATCCAAACAAAACTAGAGTCTTCTTCACAACTATGTCCCCTGCACATACAAAAAGTGCTGATTGGGGAAACAAGAATGGTACAAAATGTTTCAATGAAACAAGGCCAGTAAAAAAGAAGAATCATTGGGGAAGTGGTTCAAATAAAGGTATGATGAGTGTTGTAGCCAAAGTTATCAAGAAAATGAAAGTTCCAGTAACAGTAATCAATATTACACAAATCTCTGAGTATAGAATTGATGGTCATTCCTCAGTTTATAGTGAAATTGGTGGCAAATTGTTAACTGAAGAGGAAAGGACTAATCCATTGAATGCTGATTGTATACATTGGTGTTTGCCTGGTGTTCCTGATACTTGGAATCAAATATTTTTTGCAATGTTGTGA
Protein sequence

>Msa0533400

MNPSETMKLLGKKLSFPIIITTICILLFTIVLYAERLSFISSTSIFKFKTCPRKHIKSKSNDRKIEDVVLNASWIDDRFDFDPEECNVANGKWIFNNTIKPLYSDKSCPYIDKQFSCVKNGRNDSDYLHWEWQPEDCTLPHILIDYYIFGRFNPEIALKKLEGKRLLFVGDSLQRNQWESFVCLVQGIIPAKKKSMKRGRVHSVFKAKEYNATIEFYWAPFLVESNTDIHIIGDPKKRIIKVDEITERAKNWTGADILVFNTYVWWMSGLRVKALWGSFSNGEEGYEELDTSIAYNLGLRTWANWVDSTINPNKTRVFFTTMSPAHTKSADWGNKNGTKCFNETRPVKKKNHWGSGSNKGMMSVVAKVIKKMKVPVTVINITQISEYRIDGHSSVYSEIGGKLLTEEERTNPLNADCIHWCLPGVPDTWNQIFFAML*