Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0487500 | XP_003598051.1 | 98.658 | 298 | 4 | 0 | 1 | 298 | 1 | 298 | 0.0 | 617 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0487500 | sp|Q9T0F7|GXM2_ARATH | 61.538 | 299 | 98 | 5 | 1 | 298 | 1 | 283 | 7.43e-132 | 379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0487500 | G7J059 | 98.658 | 298 | 4 | 0 | 1 | 298 | 1 | 298 | 0.0 | 617 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002680 | Msa0487500 | 0.808868 | 2.506647e-50 | -8.615850e-47 |
| Msa0002710 | Msa0487500 | 0.803627 | 3.184794e-49 | -8.615850e-47 |
| Msa0025330 | Msa0487500 | 0.802678 | 5.006387e-49 | -8.615850e-47 |
| Msa0048540 | Msa0487500 | 0.828939 | 6.803453e-55 | -8.615850e-47 |
| Msa0072900 | Msa0487500 | 0.811270 | 7.613440e-51 | -8.615850e-47 |
| Msa0081520 | Msa0487500 | 0.852706 | 3.870994e-61 | -8.615850e-47 |
| Msa0097090 | Msa0487500 | 0.801442 | 8.986535e-49 | -8.615850e-47 |
| Msa0108160 | Msa0487500 | 0.828615 | 8.148464e-55 | -8.615850e-47 |
| Msa0116790 | Msa0487500 | 0.804288 | 2.321407e-49 | -8.615850e-47 |
| Msa0121090 | Msa0487500 | 0.806370 | 8.502327e-50 | -8.615850e-47 |
| Msa0136650 | Msa0487500 | 0.812587 | 3.933079e-51 | -8.615850e-47 |
| Msa0173890 | Msa0487500 | 0.833963 | 3.942842e-56 | -8.615850e-47 |
| Msa0174450 | Msa0487500 | 0.861380 | 1.068299e-63 | -8.615850e-47 |
| Msa0193850 | Msa0487500 | 0.802293 | 6.010382e-49 | -8.615850e-47 |
| Msa0199960 | Msa0487500 | 0.800661 | 1.298098e-48 | -8.615850e-47 |
| Msa0205840 | Msa0487500 | 0.816523 | 5.293595e-52 | -8.615850e-47 |
| Msa0206840 | Msa0487500 | 0.842175 | 3.035482e-58 | -8.615850e-47 |
| Msa0225100 | Msa0487500 | 0.818394 | 2.005722e-52 | -8.615850e-47 |
| Msa0225460 | Msa0487500 | 0.809336 | 1.990022e-50 | -8.615850e-47 |
| Msa0225680 | Msa0487500 | 0.807441 | 5.047664e-50 | -8.615850e-47 |
| Msa0373310 | Msa0487500 | 0.813857 | 2.069717e-51 | -8.615850e-47 |
| Msa0378720 | Msa0487500 | 0.801744 | 7.791272e-49 | -8.615850e-47 |
| Msa0380620 | Msa0487500 | 0.809127 | 2.206383e-50 | -8.615850e-47 |
| Msa0392380 | Msa0487500 | 0.972581 | 5.322053e-135 | -8.615850e-47 |
| Msa0417880 | Msa0487500 | 0.803719 | 3.048806e-49 | -8.615850e-47 |
| Msa0421890 | Msa0487500 | 0.824272 | 8.831918e-54 | -8.615850e-47 |
| Msa0430260 | Msa0487500 | 0.828278 | 9.827130e-55 | -8.615850e-47 |
| Msa0440320 | Msa0487500 | 0.982204 | 1.709788e-154 | -8.615850e-47 |
| Msa0467770 | Msa0487500 | 0.830798 | 2.397045e-55 | -8.615850e-47 |
| Msa0242490 | Msa0487500 | 0.804880 | 1.746483e-49 | -8.615850e-47 |
| Msa0243600 | Msa0487500 | 0.874064 | 9.043898e-68 | -8.615850e-47 |
| Msa0248970 | Msa0487500 | 0.821170 | 4.654634e-53 | -8.615850e-47 |
| Msa0249540 | Msa0487500 | 0.848082 | 7.686316e-60 | -8.615850e-47 |
| Msa0266180 | Msa0487500 | 0.804391 | 2.209455e-49 | -8.615850e-47 |
| Msa0267660 | Msa0487500 | 0.852834 | 3.559866e-61 | -8.615850e-47 |
| Msa0280690 | Msa0487500 | 0.807250 | 5.540638e-50 | -8.615850e-47 |
| Msa0282220 | Msa0487500 | 0.859399 | 4.249244e-63 | -8.615850e-47 |
| Msa0287740 | Msa0487500 | 0.814548 | 1.456629e-51 | -8.615850e-47 |
| Msa0288140 | Msa0487500 | 0.822663 | 2.100432e-53 | -8.615850e-47 |
| Msa0300270 | Msa0487500 | 0.802161 | 6.397897e-49 | -8.615850e-47 |
| Msa0307270 | Msa0487500 | 0.800794 | 1.219345e-48 | -8.615850e-47 |
| Msa0314170 | Msa0487500 | 0.840771 | 7.111736e-58 | -8.615850e-47 |
| Msa0319940 | Msa0487500 | 0.858744 | 6.676223e-63 | -8.615850e-47 |
| Msa0337540 | Msa0487500 | 0.805215 | 1.486271e-49 | -8.615850e-47 |
| Msa0487500 | Msa0488790 | 0.834472 | 2.938337e-56 | -8.615850e-47 |
| Msa0487500 | Msa0500380 | 0.806961 | 6.378910e-50 | -8.615850e-47 |
| Msa0487500 | Msa0513160 | 0.811042 | 8.530063e-51 | -8.615850e-47 |
| Msa0487500 | Msa0514170 | 0.813241 | 2.827344e-51 | -8.615850e-47 |
| Msa0487500 | Msa0528570 | 0.804147 | 2.483071e-49 | -8.615850e-47 |
| Msa0487500 | Msa0533400 | 0.800587 | 1.343946e-48 | -8.615850e-47 |
| Msa0487500 | Msa0546800 | 0.811755 | 5.972920e-51 | -8.615850e-47 |
| Msa0487500 | Msa0547110 | 0.804296 | 2.312281e-49 | -8.615850e-47 |
| Msa0487500 | Msa0557140 | 0.816695 | 4.843618e-52 | -8.615850e-47 |
| Msa0487500 | Msa0557460 | 0.808629 | 2.819137e-50 | -8.615850e-47 |
| Msa0487500 | Msa0561410 | 0.801790 | 7.624789e-49 | -8.615850e-47 |
| Msa0487500 | Msa0573380 | 0.825276 | 5.118869e-54 | -8.615850e-47 |
| Msa0487500 | Msa0589510 | 0.812076 | 5.086207e-51 | -8.615850e-47 |
| Msa0487500 | Msa0589690 | 0.826765 | 2.267365e-54 | -8.615850e-47 |
| Msa0487500 | Msa0608400 | 0.835551 | 1.570813e-56 | -8.615850e-47 |
| Msa0487500 | Msa0615420 | 0.837214 | 5.932976e-57 | -8.615850e-47 |
| Msa0487500 | Msa0623910 | 0.830148 | 3.456515e-55 | -8.615850e-47 |
| Msa0487500 | Msa0626450 | 0.876945 | 9.322520e-69 | -8.615850e-47 |
| Msa0487500 | Msa0626490 | 0.875330 | 3.354317e-68 | -8.615850e-47 |
| Msa0487500 | Msa0629600 | 0.812277 | 4.597123e-51 | -8.615850e-47 |
| Msa0487500 | Msa0641210 | 0.809223 | 2.104553e-50 | -8.615850e-47 |
| Msa0487500 | Msa0648900 | 0.822771 | 1.981943e-53 | -8.615850e-47 |
| Msa0487500 | Msa0664600 | 0.875426 | 3.110679e-68 | -8.615850e-47 |
| Msa0487500 | Msa0667370 | 0.825394 | 4.802382e-54 | -8.615850e-47 |
| Msa0487500 | Msa0683570 | 0.804596 | 2.001919e-49 | -8.615850e-47 |
| Msa0487500 | Msa0683960 | 0.810656 | 1.034043e-50 | -8.615850e-47 |
| Msa0487500 | Msa0688820 | 0.813170 | 2.931613e-51 | -8.615850e-47 |
| Msa0487500 | Msa0691400 | 0.807883 | 4.066982e-50 | -8.615850e-47 |
| Msa0487500 | Msa0698640 | 0.859018 | 5.528040e-63 | -8.615850e-47 |
| Msa0487500 | Msa0724910 | 0.801835 | 7.462837e-49 | -8.615850e-47 |
| Msa0487500 | Msa0727640 | 0.800717 | 1.264108e-48 | -8.615850e-47 |
| Msa0487500 | Msa0741220 | 0.805271 | 1.447033e-49 | -8.615850e-47 |
| Msa0487500 | Msa0742740 | 0.833166 | 6.233284e-56 | -8.615850e-47 |
| Msa0487500 | Msa0752940 | 0.808281 | 3.345222e-50 | -8.615850e-47 |
| Msa0487500 | Msa0754390 | 0.821282 | 4.387462e-53 | -8.615850e-47 |
| Msa0487500 | Msa0756620 | 0.807737 | 4.367637e-50 | -8.615850e-47 |
| Msa0487500 | Msa0765240 | 0.818573 | 1.826317e-52 | -8.615850e-47 |
| Msa0487500 | Msa0768990 | 0.815531 | 8.815981e-52 | -8.615850e-47 |
| Msa0487500 | Msa0783530 | 0.802289 | 6.020864e-49 | -8.615850e-47 |
| Msa0487500 | Msa0799950 | 0.834531 | 2.840878e-56 | -8.615850e-47 |
| Msa0487500 | Msa0820390 | 0.815573 | 8.626175e-52 | -8.615850e-47 |
| Msa0487500 | Msa0823820 | 0.832970 | 6.973583e-56 | -8.615850e-47 |
| Msa0487500 | Msa0835490 | 0.808894 | 2.474470e-50 | -8.615850e-47 |
| Msa0487500 | Msa0863010 | 0.827799 | 1.281300e-54 | -8.615850e-47 |
| Msa0487500 | Msa0967870 | 0.803906 | 2.786878e-49 | -8.615850e-47 |
| Msa0487500 | Msa0968350 | 0.871477 | 6.631437e-67 | -8.615850e-47 |
| Msa0487500 | Msa0974060 | 0.827001 | 1.990730e-54 | -8.615850e-47 |
| Msa0487500 | Msa0992030 | 0.811528 | 6.691596e-51 | -8.615850e-47 |
| Msa0487500 | Msa1020480 | 0.810533 | 1.099285e-50 | -8.615850e-47 |
| Msa0487500 | Msa1020510 | 0.831399 | 1.706703e-55 | -8.615850e-47 |
| Msa0487500 | Msa1023500 | 0.816107 | 6.556709e-52 | -8.615850e-47 |
| Msa0487500 | Msa1024740 | 0.824043 | 9.992526e-54 | -8.615850e-47 |
| Msa0487500 | Msa1031930 | 0.804466 | 2.131648e-49 | -8.615850e-47 |
| Msa0487500 | Msa1037550 | 0.823292 | 1.498692e-53 | -8.615850e-47 |
| Msa0487500 | Msa1063500 | 0.806256 | 8.986111e-50 | -8.615850e-47 |
| Msa0487500 | Msa1078930 | 0.882029 | 1.466998e-70 | -8.615850e-47 |
| Msa0487500 | Msa1100730 | 0.819910 | 9.062083e-53 | -8.615850e-47 |
| Msa0487500 | Msa1108790 | 0.831573 | 1.546165e-55 | -8.615850e-47 |
| Msa0487500 | Msa1123930 | 0.867578 | 1.233927e-65 | -8.615850e-47 |
| Msa0487500 | Msa1125940 | 0.803259 | 3.795853e-49 | -8.615850e-47 |
| Msa0487500 | Msa1140210 | 0.807384 | 5.190293e-50 | -8.615850e-47 |
| Msa0487500 | Msa1160920 | 0.806042 | 9.966598e-50 | -8.615850e-47 |
| Msa0487500 | Msa1169230 | 0.863462 | 2.447156e-64 | -8.615850e-47 |
| Msa0487500 | Msa1173280 | 0.816358 | 5.763846e-52 | -8.615850e-47 |
| Msa0487500 | Msa1222590 | 0.802246 | 6.144636e-49 | -8.615850e-47 |
| Msa0487500 | Msa1227990 | 0.820446 | 6.829602e-53 | -8.615850e-47 |
| Msa0487500 | Msa1258170 | 0.800600 | 1.335549e-48 | -8.615850e-47 |
| Msa0487500 | Msa1269480 | 0.807183 | 5.723865e-50 | -8.615850e-47 |
| Msa0487500 | Msa1308140 | 0.804296 | 2.312468e-49 | -8.615850e-47 |
| Msa0487500 | Msa1323040 | 0.804565 | 2.032469e-49 | -8.615850e-47 |
| Msa0487500 | Msa1327650 | 0.825507 | 4.514760e-54 | -8.615850e-47 |
| Msa0487500 | Msa1340700 | 0.827323 | 1.667042e-54 | -8.615850e-47 |
| Msa0487500 | Msa1348090 | 0.811101 | 8.283331e-51 | -8.615850e-47 |
| Msa0487500 | Msa1356830 | 0.842383 | 2.673327e-58 | -8.615850e-47 |
| Msa0487500 | Msa1384180 | 0.825915 | 3.613450e-54 | -8.615850e-47 |
| Msa0487500 | Msa1408080 | 0.800474 | 1.417128e-48 | -8.615850e-47 |
| Msa0487500 | Msa1426070 | 0.879614 | 1.079624e-69 | -8.615850e-47 |
| Msa0487500 | Msa1429110 | 0.803408 | 3.536239e-49 | -8.615850e-47 |
| Msa0487500 | Msa1430750 | 0.803354 | 3.628655e-49 | -8.615850e-47 |
| Msa0487500 | Msa1433810 | 0.801932 | 7.128220e-49 | -8.615850e-47 |
| Msa0487500 | Msa1434480 | 0.839240 | 1.783639e-57 | -8.615850e-47 |
| Msa0487500 | Msa1436420 | 0.845195 | 4.725994e-59 | -8.615850e-47 |
| Msa0487500 | Msa1437940 | 0.837926 | 3.896452e-57 | -8.615850e-47 |
| Msa0487500 | Msa1440960 | 0.871344 | 7.340515e-67 | -8.615850e-47 |
| Msa0487500 | Msa1445050 | 0.806135 | 9.530363e-50 | -8.615850e-47 |
| Msa0487500 | Msa1445190 | 0.813470 | 2.518682e-51 | -8.615850e-47 |
| Msa0487500 | Msa1449930 | 0.801524 | 8.647230e-49 | -8.615850e-47 |
| Msa0487500 | Msa1459360 | 0.810735 | 9.945340e-51 | -8.615850e-47 |
| Msa0487500 | Msa1459460 | 0.805783 | 1.129829e-49 | -8.615850e-47 |
| Msa0487500 | Msa1465010 | 0.803158 | 3.983924e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0487500 | MtrunA17_Chr3g0077611 | 98.658 | 298 | 4 | 0 | 1 | 298 | 1 | 298 | 0.0 | 617 |
| Msa0487500 | MtrunA17_Chr8g0377381 | 45.000 | 240 | 118 | 5 | 72 | 297 | 58 | 297 | 1.61e-68 | 215 |
| Msa0487500 | MtrunA17_Chr3g0122451 | 46.977 | 215 | 109 | 4 | 76 | 285 | 60 | 274 | 1.87e-66 | 209 |
| Msa0487500 | MtrunA17_Chr7g0225381 | 46.411 | 209 | 104 | 3 | 84 | 286 | 79 | 285 | 1.82e-58 | 189 |
| Msa0487500 | MtrunA17_Chr7g0225261 | 45.933 | 209 | 105 | 3 | 84 | 286 | 79 | 285 | 3.90e-58 | 188 |
| Msa0487500 | MtrunA17_Chr4g0044461 | 42.791 | 215 | 119 | 2 | 77 | 287 | 68 | 282 | 5.73e-58 | 188 |
| Msa0487500 | MtrunA17_Chr4g0044451 | 42.925 | 212 | 117 | 2 | 80 | 287 | 72 | 283 | 9.97e-56 | 182 |
| Msa0487500 | MtrunA17_Chr4g0053231 | 38.839 | 224 | 131 | 4 | 66 | 283 | 60 | 283 | 6.76e-51 | 170 |
| Msa0487500 | MtrunA17_Chr4g0057371 | 36.797 | 231 | 136 | 6 | 74 | 298 | 71 | 297 | 7.74e-42 | 146 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0487500 | AT4G09990.1 | 61.538 | 299 | 98 | 5 | 1 | 298 | 1 | 283 | 7.56e-133 | 379 |
| Msa0487500 | AT1G33800.1 | 60.738 | 298 | 109 | 4 | 1 | 298 | 1 | 290 | 5.48e-128 | 367 |
| Msa0487500 | AT1G09610.1 | 65.079 | 252 | 80 | 4 | 52 | 298 | 34 | 282 | 5.35e-122 | 351 |
| Msa0487500 | AT1G71690.1 | 55.446 | 303 | 114 | 7 | 1 | 298 | 9 | 295 | 4.85e-114 | 331 |
| Msa0487500 | AT1G67330.1 | 50.935 | 214 | 101 | 3 | 78 | 287 | 65 | 278 | 1.15e-73 | 228 |
| Msa0487500 | AT1G27930.1 | 49.074 | 216 | 107 | 2 | 78 | 290 | 62 | 277 | 1.51e-71 | 223 |
| Msa0487500 | AT5G67210.1 | 37.132 | 272 | 154 | 6 | 18 | 283 | 30 | 290 | 5.87e-53 | 176 |
| Msa0487500 | AT3G50220.1 | 36.397 | 272 | 162 | 7 | 18 | 283 | 31 | 297 | 1.11e-50 | 170 |
| Msa0487500 | AT2G15440.1 | 37.054 | 224 | 131 | 5 | 83 | 297 | 81 | 303 | 2.75e-50 | 169 |
| Msa0487500 | AT4G24910.1 | 34.694 | 196 | 117 | 4 | 99 | 285 | 104 | 297 | 2.35e-29 | 114 |
Find 69 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGCAACTTCTTGGTCTT+TGG | 0.164120 | 3_4:+6425410 | Msa0487500:CDS |
| AAAATCACCTTGCAACTTCT+TGG | 0.221414 | 3_4:+6425403 | Msa0487500:CDS |
| AAATGTGGATTAGCACTTAA+AGG | 0.223364 | 3_4:+6425653 | Msa0487500:CDS |
| AGTGATGAACTAATGAAAAT+TGG | 0.261741 | 3_4:+6425584 | Msa0487500:CDS |
| AAATCAATTTCATGGACAAT+AGG | 0.306327 | 3_4:-6425957 | None:intergenic |
| ATTGCTAGGAATAGAGAAAA+TGG | 0.307486 | 3_4:+6425788 | Msa0487500:CDS |
| TTTGTGCATGTTGGTGTTAT+AGG | 0.311759 | 3_4:-6425275 | None:intergenic |
| CCAACGTTGGGAACTTTGAT+TGG | 0.316396 | 3_4:-6425523 | None:intergenic |
| ACCAAGTCATAGGGCACGTT+TGG | 0.318589 | 3_4:+6425928 | Msa0487500:CDS |
| TCCATGTCTTGTCTTCTTCC+AGG | 0.323320 | 3_4:-6425490 | None:intergenic |
| GGGTACTTCGATGGCGCGCC+GGG | 0.332994 | 3_4:+6425734 | Msa0487500:CDS |
| TTGTGCATGTTGGTGTTATA+GGG | 0.335274 | 3_4:-6425274 | None:intergenic |
| AACTTCTTGGTCTTTGGATT+AGG | 0.336773 | 3_4:+6425416 | Msa0487500:CDS |
| ATTGGATGAGAGTTGTGTTT+TGG | 0.350418 | 3_4:-6425081 | None:intergenic |
| ACTTCAATATACCAAGTCAT+AGG | 0.375565 | 3_4:+6425918 | Msa0487500:CDS |
| ATACAGCTGGTTTGATTGCT+AGG | 0.379409 | 3_4:+6425774 | Msa0487500:CDS |
| AATCAATTTCATGGACAATA+GGG | 0.382464 | 3_4:-6425956 | None:intergenic |
| TGTTTGTTCATGATGTTGAT+AGG | 0.396580 | 3_4:+6425822 | Msa0487500:CDS |
| GATGATGACTAGTTTGAGAT+TGG | 0.409528 | 3_4:-6425099 | None:intergenic |
| TGGTTGAGAAAATGAGAAAA+TGG | 0.432620 | 3_4:-6425165 | None:intergenic |
| ATGAGTGCTATTTATACAGC+TGG | 0.441985 | 3_4:+6425761 | Msa0487500:CDS |
| TCTCTTGAATTGTTTGTTGA+GGG | 0.447760 | 3_4:-6425352 | None:intergenic |
| CTTGTCTTCTTCCAGGAAAA+CGG | 0.456850 | 3_4:-6425483 | None:intergenic |
| TGCATAATGGATTAATGCAT+TGG | 0.464703 | 3_4:-6425315 | None:intergenic |
| TTCTTTGTGAAGGTTATTTG+AGG | 0.465004 | 3_4:+6425873 | Msa0487500:CDS |
| CCAAGTCATAGGGCACGTTT+GGG | 0.466887 | 3_4:+6425929 | Msa0487500:CDS |
| TCTTTGTGAAGGTTATTTGA+GGG | 0.475343 | 3_4:+6425874 | Msa0487500:CDS |
| GGGGTACTTCGATGGCGCGC+CGG | 0.481478 | 3_4:+6425733 | Msa0487500:CDS |
| CCCAAACGTGCCCTATGACT+TGG | 0.483562 | 3_4:-6425929 | None:intergenic |
| ATCATGGTGGATGCACCAAC+GGG | 0.492498 | 3_4:+6425713 | Msa0487500:CDS |
| ATCTCTTGAATTGTTTGTTG+AGG | 0.496296 | 3_4:-6425353 | None:intergenic |
| CATGATATGATTCCAACGTT+GGG | 0.499455 | 3_4:-6425535 | None:intergenic |
| GGGAACAAGAAGGAAGGATT+AGG | 0.499937 | 3_4:+6425894 | Msa0487500:CDS |
| TGAAATTTATGATGTGGAAT+GGG | 0.503077 | 3_4:+6425685 | Msa0487500:CDS |
| TCCACATCATAAATTTCACT+TGG | 0.503817 | 3_4:-6425680 | None:intergenic |
| TCCAAGTGAAATTTATGATG+TGG | 0.511674 | 3_4:+6425679 | Msa0487500:CDS |
| GTGAAATTTATGATGTGGAA+TGG | 0.519138 | 3_4:+6425684 | Msa0487500:CDS |
| GCACCAACGGGGTACTTCGA+TGG | 0.521410 | 3_4:+6425725 | Msa0487500:CDS |
| TGTGGAATGGGATGTGATCA+TGG | 0.525871 | 3_4:+6425697 | Msa0487500:CDS |
| CATCATTGAACTACGGTGGC+CGG | 0.528792 | 3_4:+6425459 | Msa0487500:CDS |
| ATTAATGCATTGGCTAATGA+TGG | 0.530150 | 3_4:-6425305 | None:intergenic |
| CTTCTTCCAGGAAAACGGTC+CGG | 0.530964 | 3_4:-6425478 | None:intergenic |
| GTGTTTGAAGTTGTGGTGAG+TGG | 0.533171 | 3_4:-6425185 | None:intergenic |
| ACATGATATGATTCCAACGT+TGG | 0.536855 | 3_4:-6425536 | None:intergenic |
| ATTTGAGGGAACAAGAAGGA+AGG | 0.541340 | 3_4:+6425888 | Msa0487500:CDS |
| ACTTCGATGGCGCGCCGGGG+AGG | 0.549464 | 3_4:+6425738 | Msa0487500:CDS |
| GAAAATTGGAATGGAACAAG+AGG | 0.553174 | 3_4:+6425598 | Msa0487500:CDS |
| GTTGTTGGTGTTTGAAGTTG+TGG | 0.560811 | 3_4:-6425192 | None:intergenic |
| TCCTGGAAGAAGACAAGACA+TGG | 0.567326 | 3_4:+6425489 | Msa0487500:CDS |
| GTTGGTGTTATAGGGAGTGA+AGG | 0.571518 | 3_4:-6425266 | None:intergenic |
| TGAACTAATGAAAATTGGAA+TGG | 0.575241 | 3_4:+6425589 | Msa0487500:CDS |
| AATGCATTGGCTAATGATGG+AGG | 0.575854 | 3_4:-6425302 | None:intergenic |
| CCAATCAAAGTTCCCAACGT+TGG | 0.578373 | 3_4:+6425523 | Msa0487500:CDS |
| CTCTTGAATTGTTTGTTGAG+GGG | 0.579049 | 3_4:-6425351 | None:intergenic |
| ATGCATTGGCTAATGATGGA+GGG | 0.579142 | 3_4:-6425301 | None:intergenic |
| CTTCAATATACCAAGTCATA+GGG | 0.581013 | 3_4:+6425919 | Msa0487500:CDS |
| GGTTATTTGAGGGAACAAGA+AGG | 0.586352 | 3_4:+6425884 | Msa0487500:CDS |
| TGATGTTGATAGGAAAGTTG+AGG | 0.590781 | 3_4:+6425832 | Msa0487500:CDS |
| GATCATGGTGGATGCACCAA+CGG | 0.605400 | 3_4:+6425712 | Msa0487500:CDS |
| TTGGTGTTATAGGGAGTGAA+GGG | 0.609114 | 3_4:-6425265 | None:intergenic |
| CCAAAGACCAAGAAGTTGCA+AGG | 0.614426 | 3_4:-6425410 | None:intergenic |
| GCGCCATCGAAGTACCCCGT+TGG | 0.633771 | 3_4:-6425728 | None:intergenic |
| TAAATAGCACTCATCCTCCC+CGG | 0.635229 | 3_4:-6425752 | None:intergenic |
| ATGTGGACATCATTGAACTA+CGG | 0.637354 | 3_4:+6425452 | Msa0487500:CDS |
| TAGGTCATGATAGTCTCATG+TGG | 0.666366 | 3_4:+6425435 | Msa0487500:CDS |
| TGGACATCATTGAACTACGG+TGG | 0.678674 | 3_4:+6425455 | Msa0487500:CDS |
| GGTACTTCGATGGCGCGCCG+GGG | 0.680331 | 3_4:+6425735 | Msa0487500:CDS |
| GGAATGGGATGTGATCATGG+TGG | 0.725748 | 3_4:+6425700 | Msa0487500:CDS |
| TCATGGTGGATGCACCAACG+GGG | 0.763267 | 3_4:+6425714 | Msa0487500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTTTTTTTGAAGAACTT+TGG | - | chr3_4:6425390-6425409 | None:intergenic | 20.0% |
| !!! | TGATTTTTTTTGAAGAACTT+TGG | - | chr3_4:6425390-6425409 | None:intergenic | 20.0% |
| !! | TTTCTTGTGATGAGATTTTT+GGG | - | chr3_4:6425220-6425239 | None:intergenic | 25.0% |
| !!! | TGATTTTTGTTGTTGCATAA+TGG | - | chr3_4:6425331-6425350 | None:intergenic | 25.0% |
| ! | AGTGATGAACTAATGAAAAT+TGG | + | chr3_4:6425584-6425603 | Msa0487500:CDS | 25.0% |
| ! | TGAACTAATGAAAATTGGAA+TGG | + | chr3_4:6425589-6425608 | Msa0487500:CDS | 25.0% |
| !!! | ATCCACATTTTGAAAATCTT+GGG | - | chr3_4:6425643-6425662 | None:intergenic | 25.0% |
| !!! | AATCCACATTTTGAAAATCT+TGG | - | chr3_4:6425644-6425663 | None:intergenic | 25.0% |
| ! | TGAAATTTATGATGTGGAAT+GGG | + | chr3_4:6425685-6425704 | Msa0487500:CDS | 25.0% |
| !! | TTTCTTGTGATGAGATTTTT+GGG | - | chr3_4:6425220-6425239 | None:intergenic | 25.0% |
| !!! | TGATTTTTGTTGTTGCATAA+TGG | - | chr3_4:6425331-6425350 | None:intergenic | 25.0% |
| ! | AGTGATGAACTAATGAAAAT+TGG | + | chr3_4:6425584-6425603 | Msa0487500:CDS | 25.0% |
| ! | TGAACTAATGAAAATTGGAA+TGG | + | chr3_4:6425589-6425608 | Msa0487500:CDS | 25.0% |
| !!! | ATCCACATTTTGAAAATCTT+GGG | - | chr3_4:6425643-6425662 | None:intergenic | 25.0% |
| !!! | AATCCACATTTTGAAAATCT+TGG | - | chr3_4:6425644-6425663 | None:intergenic | 25.0% |
| ! | TGAAATTTATGATGTGGAAT+GGG | + | chr3_4:6425685-6425704 | Msa0487500:CDS | 25.0% |
| TGGTTGAGAAAATGAGAAAA+TGG | - | chr3_4:6425168-6425187 | None:intergenic | 30.0% | |
| ! | GTTTCTTGTGATGAGATTTT+TGG | - | chr3_4:6425221-6425240 | None:intergenic | 30.0% |
| !! | ATTAATGCATTGGCTAATGA+TGG | - | chr3_4:6425308-6425327 | None:intergenic | 30.0% |
| !! | TGCATAATGGATTAATGCAT+TGG | - | chr3_4:6425318-6425337 | None:intergenic | 30.0% |
| ! | TCTCTTGAATTGTTTGTTGA+GGG | - | chr3_4:6425355-6425374 | None:intergenic | 30.0% |
| ! | ATCTCTTGAATTGTTTGTTG+AGG | - | chr3_4:6425356-6425375 | None:intergenic | 30.0% |
| !! | AAATGTGGATTAGCACTTAA+AGG | + | chr3_4:6425653-6425672 | Msa0487500:CDS | 30.0% |
| TCCAAGTGAAATTTATGATG+TGG | + | chr3_4:6425679-6425698 | Msa0487500:CDS | 30.0% | |
| TCCACATCATAAATTTCACT+TGG | - | chr3_4:6425683-6425702 | None:intergenic | 30.0% | |
| GTGAAATTTATGATGTGGAA+TGG | + | chr3_4:6425684-6425703 | Msa0487500:CDS | 30.0% | |
| ATTGCTAGGAATAGAGAAAA+TGG | + | chr3_4:6425788-6425807 | Msa0487500:CDS | 30.0% | |
| TGTTTGTTCATGATGTTGAT+AGG | + | chr3_4:6425822-6425841 | Msa0487500:CDS | 30.0% | |
| ! | AGTTGAGGATCAATTTTCAA+AGG | + | chr3_4:6425847-6425866 | Msa0487500:CDS | 30.0% |
| TTCTTTGTGAAGGTTATTTG+AGG | + | chr3_4:6425873-6425892 | Msa0487500:CDS | 30.0% | |
| TCTTTGTGAAGGTTATTTGA+GGG | + | chr3_4:6425874-6425893 | Msa0487500:CDS | 30.0% | |
| ACTTCAATATACCAAGTCAT+AGG | + | chr3_4:6425918-6425937 | Msa0487500:CDS | 30.0% | |
| CTTCAATATACCAAGTCATA+GGG | + | chr3_4:6425919-6425938 | Msa0487500:CDS | 30.0% | |
| TGGTTGAGAAAATGAGAAAA+TGG | - | chr3_4:6425168-6425187 | None:intergenic | 30.0% | |
| ! | GTTTCTTGTGATGAGATTTT+TGG | - | chr3_4:6425221-6425240 | None:intergenic | 30.0% |
| !! | ATTAATGCATTGGCTAATGA+TGG | - | chr3_4:6425308-6425327 | None:intergenic | 30.0% |
| !! | TGCATAATGGATTAATGCAT+TGG | - | chr3_4:6425318-6425337 | None:intergenic | 30.0% |
| ! | TCTCTTGAATTGTTTGTTGA+GGG | - | chr3_4:6425355-6425374 | None:intergenic | 30.0% |
| ! | ATCTCTTGAATTGTTTGTTG+AGG | - | chr3_4:6425356-6425375 | None:intergenic | 30.0% |
| !! | AAATGTGGATTAGCACTTAA+AGG | + | chr3_4:6425653-6425672 | Msa0487500:CDS | 30.0% |
| TCCAAGTGAAATTTATGATG+TGG | + | chr3_4:6425679-6425698 | Msa0487500:CDS | 30.0% | |
| TCCACATCATAAATTTCACT+TGG | - | chr3_4:6425683-6425702 | None:intergenic | 30.0% | |
| GTGAAATTTATGATGTGGAA+TGG | + | chr3_4:6425684-6425703 | Msa0487500:CDS | 30.0% | |
| ATTGCTAGGAATAGAGAAAA+TGG | + | chr3_4:6425788-6425807 | Msa0487500:CDS | 30.0% | |
| TGTTTGTTCATGATGTTGAT+AGG | + | chr3_4:6425822-6425841 | Msa0487500:CDS | 30.0% | |
| ! | AGTTGAGGATCAATTTTCAA+AGG | + | chr3_4:6425847-6425866 | Msa0487500:CDS | 30.0% |
| TTCTTTGTGAAGGTTATTTG+AGG | + | chr3_4:6425873-6425892 | Msa0487500:CDS | 30.0% | |
| TCTTTGTGAAGGTTATTTGA+GGG | + | chr3_4:6425874-6425893 | Msa0487500:CDS | 30.0% | |
| ACTTCAATATACCAAGTCAT+AGG | + | chr3_4:6425918-6425937 | Msa0487500:CDS | 30.0% | |
| CTTCAATATACCAAGTCATA+GGG | + | chr3_4:6425919-6425938 | Msa0487500:CDS | 30.0% | |
| ! | ATTGGATGAGAGTTGTGTTT+TGG | - | chr3_4:6425084-6425103 | None:intergenic | 35.0% |
| !! | GATGATGACTAGTTTGAGAT+TGG | - | chr3_4:6425102-6425121 | None:intergenic | 35.0% |
| !! | TTGTGCATGTTGGTGTTATA+GGG | - | chr3_4:6425277-6425296 | None:intergenic | 35.0% |
| !! | TTTGTGCATGTTGGTGTTAT+AGG | - | chr3_4:6425278-6425297 | None:intergenic | 35.0% |
| ! | CTCTTGAATTGTTTGTTGAG+GGG | - | chr3_4:6425354-6425373 | None:intergenic | 35.0% |
| AAAATCACCTTGCAACTTCT+TGG | + | chr3_4:6425403-6425422 | Msa0487500:CDS | 35.0% | |
| ! | AACTTCTTGGTCTTTGGATT+AGG | + | chr3_4:6425416-6425435 | Msa0487500:CDS | 35.0% |
| ATGTGGACATCATTGAACTA+CGG | + | chr3_4:6425452-6425471 | Msa0487500:CDS | 35.0% | |
| CATGATATGATTCCAACGTT+GGG | - | chr3_4:6425538-6425557 | None:intergenic | 35.0% | |
| ACATGATATGATTCCAACGT+TGG | - | chr3_4:6425539-6425558 | None:intergenic | 35.0% | |
| GAAAATTGGAATGGAACAAG+AGG | + | chr3_4:6425598-6425617 | Msa0487500:CDS | 35.0% | |
| ! | GACCCAAGATTTTCAAAATG+TGG | + | chr3_4:6425638-6425657 | Msa0487500:CDS | 35.0% |
| !! | ATGAGTGCTATTTATACAGC+TGG | + | chr3_4:6425761-6425780 | Msa0487500:CDS | 35.0% |
| ! | TGATGTTGATAGGAAAGTTG+AGG | + | chr3_4:6425832-6425851 | Msa0487500:CDS | 35.0% |
| ! | TCAAAGGCTTTTCTTTGTGA+AGG | + | chr3_4:6425863-6425882 | Msa0487500:CDS | 35.0% |
| ! | ATTGGATGAGAGTTGTGTTT+TGG | - | chr3_4:6425084-6425103 | None:intergenic | 35.0% |
| !! | GATGATGACTAGTTTGAGAT+TGG | - | chr3_4:6425102-6425121 | None:intergenic | 35.0% |
| !! | TTGTGCATGTTGGTGTTATA+GGG | - | chr3_4:6425277-6425296 | None:intergenic | 35.0% |
| !! | TTTGTGCATGTTGGTGTTAT+AGG | - | chr3_4:6425278-6425297 | None:intergenic | 35.0% |
| ! | CTCTTGAATTGTTTGTTGAG+GGG | - | chr3_4:6425354-6425373 | None:intergenic | 35.0% |
| AAAATCACCTTGCAACTTCT+TGG | + | chr3_4:6425403-6425422 | Msa0487500:CDS | 35.0% | |
| ! | AACTTCTTGGTCTTTGGATT+AGG | + | chr3_4:6425416-6425435 | Msa0487500:CDS | 35.0% |
| ATGTGGACATCATTGAACTA+CGG | + | chr3_4:6425452-6425471 | Msa0487500:CDS | 35.0% | |
| CATGATATGATTCCAACGTT+GGG | - | chr3_4:6425538-6425557 | None:intergenic | 35.0% | |
| ACATGATATGATTCCAACGT+TGG | - | chr3_4:6425539-6425558 | None:intergenic | 35.0% | |
| GAAAATTGGAATGGAACAAG+AGG | + | chr3_4:6425598-6425617 | Msa0487500:CDS | 35.0% | |
| ! | GACCCAAGATTTTCAAAATG+TGG | + | chr3_4:6425638-6425657 | Msa0487500:CDS | 35.0% |
| !! | ATGAGTGCTATTTATACAGC+TGG | + | chr3_4:6425761-6425780 | Msa0487500:CDS | 35.0% |
| ! | TGATGTTGATAGGAAAGTTG+AGG | + | chr3_4:6425832-6425851 | Msa0487500:CDS | 35.0% |
| ! | TCAAAGGCTTTTCTTTGTGA+AGG | + | chr3_4:6425863-6425882 | Msa0487500:CDS | 35.0% |
| ! | GTTGTTGGTGTTTGAAGTTG+TGG | - | chr3_4:6425195-6425214 | None:intergenic | 40.0% |
| !!! | TGAGATTTTTGGGTCGTTGT+TGG | - | chr3_4:6425210-6425229 | None:intergenic | 40.0% |
| !! | TTGGTGTTATAGGGAGTGAA+GGG | - | chr3_4:6425268-6425287 | None:intergenic | 40.0% |
| !! | ATGCATTGGCTAATGATGGA+GGG | - | chr3_4:6425304-6425323 | None:intergenic | 40.0% |
| !! | AATGCATTGGCTAATGATGG+AGG | - | chr3_4:6425305-6425324 | None:intergenic | 40.0% |
| TAGGTCATGATAGTCTCATG+TGG | + | chr3_4:6425435-6425454 | Msa0487500:CDS | 40.0% | |
| CTTGTCTTCTTCCAGGAAAA+CGG | - | chr3_4:6425486-6425505 | None:intergenic | 40.0% | |
| !! | ATACAGCTGGTTTGATTGCT+AGG | + | chr3_4:6425774-6425793 | Msa0487500:CDS | 40.0% |
| GGTTATTTGAGGGAACAAGA+AGG | + | chr3_4:6425884-6425903 | Msa0487500:CDS | 40.0% | |
| ATTTGAGGGAACAAGAAGGA+AGG | + | chr3_4:6425888-6425907 | Msa0487500:CDS | 40.0% | |
| ! | GTTGTTGGTGTTTGAAGTTG+TGG | - | chr3_4:6425195-6425214 | None:intergenic | 40.0% |
| !!! | TGAGATTTTTGGGTCGTTGT+TGG | - | chr3_4:6425210-6425229 | None:intergenic | 40.0% |
| !! | TTGGTGTTATAGGGAGTGAA+GGG | - | chr3_4:6425268-6425287 | None:intergenic | 40.0% |
| !! | ATGCATTGGCTAATGATGGA+GGG | - | chr3_4:6425304-6425323 | None:intergenic | 40.0% |
| !! | AATGCATTGGCTAATGATGG+AGG | - | chr3_4:6425305-6425324 | None:intergenic | 40.0% |
| TAGGTCATGATAGTCTCATG+TGG | + | chr3_4:6425435-6425454 | Msa0487500:CDS | 40.0% | |
| CTTGTCTTCTTCCAGGAAAA+CGG | - | chr3_4:6425486-6425505 | None:intergenic | 40.0% | |
| !! | ATACAGCTGGTTTGATTGCT+AGG | + | chr3_4:6425774-6425793 | Msa0487500:CDS | 40.0% |
| GGTTATTTGAGGGAACAAGA+AGG | + | chr3_4:6425884-6425903 | Msa0487500:CDS | 40.0% | |
| ATTTGAGGGAACAAGAAGGA+AGG | + | chr3_4:6425888-6425907 | Msa0487500:CDS | 40.0% | |
| ! | GTGTTTGAAGTTGTGGTGAG+TGG | - | chr3_4:6425188-6425207 | None:intergenic | 45.0% |
| !! | GTTGGTGTTATAGGGAGTGA+AGG | - | chr3_4:6425269-6425288 | None:intergenic | 45.0% |
| !!! | GGAGGGTTTTTTGTGCATGT+TGG | - | chr3_4:6425287-6425306 | None:intergenic | 45.0% |
| CCAAAGACCAAGAAGTTGCA+AGG | - | chr3_4:6425413-6425432 | None:intergenic | 45.0% | |
| ! | CCTTGCAACTTCTTGGTCTT+TGG | + | chr3_4:6425410-6425429 | Msa0487500:CDS | 45.0% |
| TGGACATCATTGAACTACGG+TGG | + | chr3_4:6425455-6425474 | Msa0487500:CDS | 45.0% | |
| TCCTGGAAGAAGACAAGACA+TGG | + | chr3_4:6425489-6425508 | Msa0487500:CDS | 45.0% | |
| TCCATGTCTTGTCTTCTTCC+AGG | - | chr3_4:6425493-6425512 | None:intergenic | 45.0% | |
| CCAACGTTGGGAACTTTGAT+TGG | - | chr3_4:6425526-6425545 | None:intergenic | 45.0% | |
| CCAATCAAAGTTCCCAACGT+TGG | + | chr3_4:6425523-6425542 | Msa0487500:CDS | 45.0% | |
| TGTGGAATGGGATGTGATCA+TGG | + | chr3_4:6425697-6425716 | Msa0487500:CDS | 45.0% | |
| TAAATAGCACTCATCCTCCC+CGG | - | chr3_4:6425755-6425774 | None:intergenic | 45.0% | |
| GGGAACAAGAAGGAAGGATT+AGG | + | chr3_4:6425894-6425913 | Msa0487500:CDS | 45.0% | |
| ! | GTGTTTGAAGTTGTGGTGAG+TGG | - | chr3_4:6425188-6425207 | None:intergenic | 45.0% |
| !! | GTTGGTGTTATAGGGAGTGA+AGG | - | chr3_4:6425269-6425288 | None:intergenic | 45.0% |
| !!! | GGAGGGTTTTTTGTGCATGT+TGG | - | chr3_4:6425287-6425306 | None:intergenic | 45.0% |
| CCAAAGACCAAGAAGTTGCA+AGG | - | chr3_4:6425413-6425432 | None:intergenic | 45.0% | |
| ! | CCTTGCAACTTCTTGGTCTT+TGG | + | chr3_4:6425410-6425429 | Msa0487500:CDS | 45.0% |
| TGGACATCATTGAACTACGG+TGG | + | chr3_4:6425455-6425474 | Msa0487500:CDS | 45.0% | |
| TCCTGGAAGAAGACAAGACA+TGG | + | chr3_4:6425489-6425508 | Msa0487500:CDS | 45.0% | |
| TCCATGTCTTGTCTTCTTCC+AGG | - | chr3_4:6425493-6425512 | None:intergenic | 45.0% | |
| CCAACGTTGGGAACTTTGAT+TGG | - | chr3_4:6425526-6425545 | None:intergenic | 45.0% | |
| CCAATCAAAGTTCCCAACGT+TGG | + | chr3_4:6425523-6425542 | Msa0487500:CDS | 45.0% | |
| TGTGGAATGGGATGTGATCA+TGG | + | chr3_4:6425697-6425716 | Msa0487500:CDS | 45.0% | |
| TAAATAGCACTCATCCTCCC+CGG | - | chr3_4:6425755-6425774 | None:intergenic | 45.0% | |
| GGGAACAAGAAGGAAGGATT+AGG | + | chr3_4:6425894-6425913 | Msa0487500:CDS | 45.0% | |
| CATCATTGAACTACGGTGGC+CGG | + | chr3_4:6425459-6425478 | Msa0487500:CDS | 50.0% | |
| CTTCTTCCAGGAAAACGGTC+CGG | - | chr3_4:6425481-6425500 | None:intergenic | 50.0% | |
| GGAATGGGATGTGATCATGG+TGG | + | chr3_4:6425700-6425719 | Msa0487500:CDS | 50.0% | |
| !! | GATCATGGTGGATGCACCAA+CGG | + | chr3_4:6425712-6425731 | Msa0487500:CDS | 50.0% |
| !! | ATCATGGTGGATGCACCAAC+GGG | + | chr3_4:6425713-6425732 | Msa0487500:CDS | 50.0% |
| ACCAAGTCATAGGGCACGTT+TGG | + | chr3_4:6425928-6425947 | Msa0487500:CDS | 50.0% | |
| CCAAGTCATAGGGCACGTTT+GGG | + | chr3_4:6425929-6425948 | Msa0487500:CDS | 50.0% | |
| CATCATTGAACTACGGTGGC+CGG | + | chr3_4:6425459-6425478 | Msa0487500:CDS | 50.0% | |
| CTTCTTCCAGGAAAACGGTC+CGG | - | chr3_4:6425481-6425500 | None:intergenic | 50.0% | |
| GGAATGGGATGTGATCATGG+TGG | + | chr3_4:6425700-6425719 | Msa0487500:CDS | 50.0% | |
| !! | GATCATGGTGGATGCACCAA+CGG | + | chr3_4:6425712-6425731 | Msa0487500:CDS | 50.0% |
| !! | ATCATGGTGGATGCACCAAC+GGG | + | chr3_4:6425713-6425732 | Msa0487500:CDS | 50.0% |
| ACCAAGTCATAGGGCACGTT+TGG | + | chr3_4:6425928-6425947 | Msa0487500:CDS | 50.0% | |
| CCAAGTCATAGGGCACGTTT+GGG | + | chr3_4:6425929-6425948 | Msa0487500:CDS | 50.0% | |
| !! | TCATGGTGGATGCACCAACG+GGG | + | chr3_4:6425714-6425733 | Msa0487500:CDS | 55.0% |
| CCCAAACGTGCCCTATGACT+TGG | - | chr3_4:6425932-6425951 | None:intergenic | 55.0% | |
| !! | TCATGGTGGATGCACCAACG+GGG | + | chr3_4:6425714-6425733 | Msa0487500:CDS | 55.0% |
| CCCAAACGTGCCCTATGACT+TGG | - | chr3_4:6425932-6425951 | None:intergenic | 55.0% | |
| ! | GCACCAACGGGGTACTTCGA+TGG | + | chr3_4:6425725-6425744 | Msa0487500:CDS | 60.0% |
| ! | GCACCAACGGGGTACTTCGA+TGG | + | chr3_4:6425725-6425744 | Msa0487500:CDS | 60.0% |
| ! | GCGCCATCGAAGTACCCCGT+TGG | - | chr3_4:6425731-6425750 | None:intergenic | 65.0% |
| ! | GCGCCATCGAAGTACCCCGT+TGG | - | chr3_4:6425731-6425750 | None:intergenic | 65.0% |
| ! | CGGTGGCCGGACCGTTTTCC+TGG | + | chr3_4:6425472-6425491 | Msa0487500:CDS | 70.0% |
| ! | GGGGTACTTCGATGGCGCGC+CGG | + | chr3_4:6425733-6425752 | Msa0487500:CDS | 70.0% |
| GGGTACTTCGATGGCGCGCC+GGG | + | chr3_4:6425734-6425753 | Msa0487500:CDS | 70.0% | |
| GGTACTTCGATGGCGCGCCG+GGG | + | chr3_4:6425735-6425754 | Msa0487500:CDS | 70.0% | |
| ! | CGGTGGCCGGACCGTTTTCC+TGG | + | chr3_4:6425472-6425491 | Msa0487500:CDS | 70.0% |
| ! | GGGGTACTTCGATGGCGCGC+CGG | + | chr3_4:6425733-6425752 | Msa0487500:CDS | 70.0% |
| GGGTACTTCGATGGCGCGCC+GGG | + | chr3_4:6425734-6425753 | Msa0487500:CDS | 70.0% | |
| GGTACTTCGATGGCGCGCCG+GGG | + | chr3_4:6425735-6425754 | Msa0487500:CDS | 70.0% | |
| ACTTCGATGGCGCGCCGGGG+AGG | + | chr3_4:6425738-6425757 | Msa0487500:CDS | 75.0% | |
| ACTTCGATGGCGCGCCGGGG+AGG | + | chr3_4:6425738-6425757 | Msa0487500:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 6425074 | 6425970 | 6425074 | ID=Msa0487500;Name=Msa0487500 |
| chr3_4 | mRNA | 6425074 | 6425970 | 6425074 | ID=Msa0487500-mRNA-1;Parent=Msa0487500;Name=Msa0487500-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|298 |
| chr3_4 | exon | 6425074 | 6425970 | 6425074 | ID=Msa0487500-mRNA-1:exon:2250;Parent=Msa0487500-mRNA-1 |
| chr3_4 | CDS | 6425074 | 6425970 | 6425074 | ID=Msa0487500-mRNA-1:cds;Parent=Msa0487500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
