Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0546090 | XP_039688869.1 | 75.000 | 68 | 17 | 0 | 112 | 179 | 278 | 345 | 1.57e-18 | 99.4 |
| Msa0546090 | XP_039688869.1 | 86.628 | 344 | 31 | 3 | 186 | 521 | 32 | 368 | 3.98e-165 | 482 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0546090 | sp|Q8LJS2|HDT1_SOYBN | 41.393 | 244 | 78 | 6 | 3 | 186 | 31 | 269 | 3.78e-35 | 136 |
| Msa0546090 | sp|Q8LJS2|HDT1_SOYBN | 48.855 | 131 | 64 | 3 | 186 | 315 | 28 | 156 | 1.07e-25 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0546090 | A0A396I8J9 | 74.576 | 59 | 15 | 0 | 3 | 61 | 35 | 93 | 3.73e-16 | 91.3 |
| Msa0546090 | A0A396I8J9 | 75.000 | 68 | 17 | 0 | 112 | 179 | 282 | 349 | 7.94e-19 | 99.4 |
| Msa0546090 | A0A396I8J9 | 87.791 | 344 | 31 | 2 | 186 | 521 | 32 | 372 | 3.76e-162 | 474 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0546090 | Msa1109310 | 0.803790 | 2.945816e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0546090 | MtrunA17_Chr4g0027191 | 87.791 | 344 | 31 | 2 | 186 | 521 | 32 | 372 | 7.25e-166 | 474 |
| Msa0546090 | MtrunA17_Chr4g0027191 | 75.000 | 68 | 17 | 0 | 112 | 179 | 282 | 349 | 1.53e-22 | 99.4 |
| Msa0546090 | MtrunA17_Chr4g0027191 | 74.576 | 59 | 15 | 0 | 3 | 61 | 35 | 93 | 7.18e-20 | 91.3 |
| Msa0546090 | MtrunA17_Chr4g0027181 | 78.404 | 213 | 13 | 1 | 3 | 182 | 35 | 247 | 8.94e-75 | 237 |
| Msa0546090 | MtrunA17_Chr4g0027181 | 61.947 | 113 | 36 | 3 | 186 | 298 | 32 | 137 | 1.73e-26 | 108 |
| Msa0546090 | MtrunA17_Chr4g0027181 | 63.043 | 92 | 23 | 2 | 438 | 521 | 179 | 267 | 1.39e-21 | 94.7 |
| Msa0546090 | MtrunA17_Chr2g0320884 | 64.789 | 71 | 25 | 0 | 186 | 256 | 62 | 132 | 6.40e-23 | 99.8 |
| Msa0546090 | MtrunA17_Chr2g0320884 | 64.407 | 59 | 21 | 0 | 3 | 61 | 65 | 123 | 6.54e-16 | 79.0 |
| Msa0546090 | MtrunA17_Chr2g0320884 | 69.841 | 63 | 16 | 2 | 114 | 176 | 236 | 295 | 1.14e-15 | 78.2 |
| Msa0546090 | MtrunA17_Chr7g0265761 | 43.678 | 87 | 43 | 2 | 183 | 266 | 20 | 103 | 1.95e-14 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0546090 | AT5G22650.1 | 42.500 | 80 | 45 | 1 | 198 | 277 | 36 | 114 | 6.83e-12 | 67.0 |
| Msa0546090 | AT5G22650.2 | 42.500 | 80 | 45 | 1 | 198 | 277 | 36 | 114 | 7.28e-12 | 67.0 |
| Msa0546090 | AT3G44750.2 | 47.692 | 65 | 33 | 1 | 190 | 254 | 30 | 93 | 1.91e-11 | 64.7 |
| Msa0546090 | AT3G44750.1 | 47.692 | 65 | 33 | 1 | 190 | 254 | 30 | 93 | 1.99e-11 | 64.7 |
Find 96 sgRNAs with CRISPR-Local
Find 451 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTTGAAGGCTGCAAATTC+TGG | 0.194784 | 4_1:+37279653 | Msa0546090:CDS |
| GCTGATCTGAAGTTTGTTAT+AGG | 0.213108 | 4_1:+37278754 | Msa0546090:CDS |
| TCAGACTCTGATTCTTCTTC+AGG | 0.263791 | 4_1:-37279689 | None:intergenic |
| TCTCTTTATTATAGTGAGTA+TGG | 0.264311 | 4_1:+37287615 | Msa0546090:intron |
| TGTTCTGGGAACTCTTATTA+AGG | 0.282113 | 4_1:+37284707 | Msa0546090:CDS |
| TCAACAATATTACCAGTCTT+TGG | 0.289435 | 4_1:-37285677 | None:intergenic |
| TGATGATCAGAAGTTTGTTC+TGG | 0.302397 | 4_1:+37284692 | Msa0546090:CDS |
| AAAATCATACTTGCTAGAAT+TGG | 0.326898 | 4_1:-37287400 | None:intergenic |
| GACTTTGACTCCGACTCTTC+TGG | 0.333727 | 4_1:+37285344 | Msa0546090:CDS |
| GCAAAGGAGGCTGCTAAATC+TGG | 0.340825 | 4_1:+37285602 | Msa0546090:CDS |
| ATGGGACTCTGGTTCTTTGC+AGG | 0.347510 | 4_1:-37280903 | None:intergenic |
| AAGGCACCAGTTTCAGCAAT+AGG | 0.348226 | 4_1:-37285629 | None:intergenic |
| AGAAGAGACTCCTGCTAAAA+AGG | 0.352924 | 4_1:+37280053 | Msa0546090:CDS |
| ATCAAAAGCTCAAGCTTTGA+AGG | 0.357438 | 4_1:+37279640 | Msa0546090:intron |
| TTCCTCACAGGAGCAAGTTC+AGG | 0.366883 | 4_1:-37285462 | None:intergenic |
| GATATTTCTCCATATTTCTC+TGG | 0.370681 | 4_1:-37285701 | None:intergenic |
| TTGCTACGTTAATTATATCT+TGG | 0.395246 | 4_1:+37287748 | Msa0546090:three_prime_UTR |
| TTAGCTTTCTTGGTAGGAAC+GGG | 0.397776 | 4_1:-37280233 | None:intergenic |
| CCACCCTTCTTCATAGGGTG+GGG | 0.414172 | 4_1:-37280864 | None:intergenic |
| CCACCCTTCTTCATAGGGTG+GGG | 0.414172 | 4_1:-37287342 | None:intergenic |
| ATTGTTGATCCAGAGAAATA+TGG | 0.415344 | 4_1:+37285692 | Msa0546090:CDS |
| GATTCTTCTTCAGGTTCAGC+AGG | 0.415898 | 4_1:-37279680 | None:intergenic |
| TGTTATAGGAACTCTTACTA+AGG | 0.418073 | 4_1:+37278768 | Msa0546090:CDS |
| TCCACCCTTCTTCATAGGGT+GGG | 0.423820 | 4_1:-37280865 | None:intergenic |
| TCCACCCTTCTTCATAGGGT+GGG | 0.423820 | 4_1:-37287343 | None:intergenic |
| ACCTTCATAGCAAGAGCCTC+TGG | 0.431349 | 4_1:-37286052 | None:intergenic |
| AAAACATACTTGTTAGAAAT+GGG | 0.436551 | 4_1:-37280921 | None:intergenic |
| GGAAAACCTATTGCTGAAAC+TGG | 0.436991 | 4_1:+37285623 | Msa0546090:CDS |
| TACAATAGTACCTTCTTAGC+AGG | 0.437129 | 4_1:-37286279 | None:intergenic |
| GTTTAAGTGAAAACATAGAT+TGG | 0.438158 | 4_1:+37287687 | Msa0546090:three_prime_UTR |
| TCCAGAGGCTCTTGCTATGA+AGG | 0.439340 | 4_1:+37286051 | Msa0546090:CDS |
| TTTCTGGATACAAAGCCTTT+CGG | 0.444393 | 4_1:+37284814 | Msa0546090:CDS |
| AGTAGCATTCTTTGAATTGT+GGG | 0.447750 | 4_1:-37284784 | None:intergenic |
| GATGATCAGAAGTTTGTTCT+GGG | 0.451091 | 4_1:+37284693 | Msa0546090:CDS |
| ACTTTCAAATACAGAACAAC+AGG | 0.463446 | 4_1:-37278730 | None:intergenic |
| ACTTGCTAGAATTGGAAGTC+TGG | 0.474914 | 4_1:-37287392 | None:intergenic |
| AAATCACTGACGATTGTGCT+TGG | 0.476877 | 4_1:-37287561 | None:intergenic |
| CCCGTCTAGAACGATATTCA+AGG | 0.477788 | 4_1:-37278809 | None:intergenic |
| CAGTAGCATTCTTTGAATTG+TGG | 0.478762 | 4_1:-37284785 | None:intergenic |
| AACTCCCCACCCTATGAAGA+AGG | 0.490850 | 4_1:+37280860 | Msa0546090:CDS |
| TTCCACCCTTCTTCATAGGG+TGG | 0.491279 | 4_1:-37280866 | None:intergenic |
| TTCCACCCTTCTTCATAGGG+TGG | 0.491279 | 4_1:-37287344 | None:intergenic |
| TACTCCCCACCCTATGAAGA+AGG | 0.493865 | 4_1:+37287338 | Msa0546090:CDS |
| CTTTAGGTTGCACTCGGGGA+AGG | 0.500046 | 4_1:+37278685 | Msa0546090:intron |
| AATCTTGACTTTCTTTGCAA+AGG | 0.502340 | 4_1:-37285648 | None:intergenic |
| ACTTCTCAGAATGCTGCAAA+GGG | 0.502821 | 4_1:+37287369 | Msa0546090:CDS |
| TGAAGAGACTCCGGCTAAGA+AGG | 0.508334 | 4_1:+37286497 | Msa0546090:CDS |
| AACTTCTCAGAATGCTGCAA+AGG | 0.510193 | 4_1:+37287368 | Msa0546090:CDS |
| TGTTATCTTTAGGTTGCACT+CGG | 0.512638 | 4_1:+37278679 | Msa0546090:intron |
| ATCCATGGCAATTTGAGGTA+TGG | 0.513205 | 4_1:-37284733 | None:intergenic |
| TTTAGGTTGCACTCGGGGAA+GGG | 0.515624 | 4_1:+37278686 | Msa0546090:intron |
| CCTTGAATATCGTTCTAGAC+GGG | 0.516260 | 4_1:+37278809 | Msa0546090:CDS |
| TGTTATCTTCAGGTTACACT+TGG | 0.517201 | 4_1:+37284618 | Msa0546090:intron |
| AAGATATCCATGGCAATTTG+AGG | 0.522560 | 4_1:-37284738 | None:intergenic |
| TTTAGCTTTCTTGGTAGGAA+CGG | 0.527052 | 4_1:-37280234 | None:intergenic |
| CACCTACCACGTTTCCTCAC+AGG | 0.528351 | 4_1:-37285474 | None:intergenic |
| TGAAGAGACTCCTGCTAAGA+AGG | 0.530033 | 4_1:+37286269 | Msa0546090:CDS |
| TAGTTGAATACCTTCTTAGC+CGG | 0.530312 | 4_1:-37286507 | None:intergenic |
| AAGATTGTTGATCCAAAGAC+TGG | 0.531016 | 4_1:+37285665 | Msa0546090:CDS |
| TGAACTTTCTCACAATTCAA+AGG | 0.534774 | 4_1:+37278837 | Msa0546090:CDS |
| TCTTCTTCACTCTCACTAGC+AGG | 0.540100 | 4_1:-37280036 | None:intergenic |
| ACCTTGAATATCGTTCTAGA+CGG | 0.542911 | 4_1:+37278808 | Msa0546090:CDS |
| AGATCTGCCTCCTTCAAAGC+TGG | 0.543219 | 4_1:+37287521 | Msa0546090:intron |
| ATCAAAAGCTCAAGCTGCAA+AGG | 0.552447 | 4_1:+37285586 | Msa0546090:CDS |
| TGGTTCTTTGCAGGACTCTG+AGG | 0.553469 | 4_1:-37280894 | None:intergenic |
| TGATCATTCAATTTCTGATG+AGG | 0.556131 | 4_1:+37285757 | Msa0546090:CDS |
| AATGCTACTCCTGAAAAGAC+TGG | 0.563878 | 4_1:+37280257 | Msa0546090:CDS |
| ATTGCTACTCCTGAAAAGAC+TGG | 0.563878 | 4_1:+37286701 | Msa0546090:CDS |
| ACTTGTTAGAAATGGGACTC+TGG | 0.564512 | 4_1:-37280914 | None:intergenic |
| GTTATCTTTAGGTTGCACTC+GGG | 0.569880 | 4_1:+37278680 | Msa0546090:intron |
| GAACAGAAAGAGATCAAATG+AGG | 0.570522 | 4_1:+37286640 | Msa0546090:CDS |
| TACCATACCTCAAATTGCCA+TGG | 0.571245 | 4_1:+37284731 | Msa0546090:CDS |
| AAAAGCTCAAGCTGCAAAGG+AGG | 0.572719 | 4_1:+37285589 | Msa0546090:CDS |
| AGTATCACTATCACTCGTAT+CGG | 0.589655 | 4_1:-37286460 | None:intergenic |
| TCTTCAGGTTACACTTGGAG+AGG | 0.596518 | 4_1:+37284623 | Msa0546090:intron |
| TAGTAGTGATGAAGAGACTC+CGG | 0.608463 | 4_1:+37286488 | Msa0546090:CDS |
| TGATATTTCACTCAATGAAG+AGG | 0.611166 | 4_1:+37279724 | Msa0546090:CDS |
| CTTGCTCCTGTGAGGAAACG+TGG | 0.612069 | 4_1:+37285468 | Msa0546090:CDS |
| CCCCACCCTATGAAGAAGGG+TGG | 0.617916 | 4_1:+37280864 | Msa0546090:CDS |
| ATGAGTCTCACCAGAAGAGT+CGG | 0.621168 | 4_1:-37285354 | None:intergenic |
| TTATCTTTAGGTTGCACTCG+GGG | 0.622300 | 4_1:+37278681 | Msa0546090:intron |
| CGCGGTTAGAAAGATATCCA+TGG | 0.623861 | 4_1:-37284748 | None:intergenic |
| ATTCAAGGTAGTCTGAGGAA+AGG | 0.624002 | 4_1:-37278794 | None:intergenic |
| CCCCACCCTATGAAGAAGGG+TGG | 0.624736 | 4_1:+37287342 | Msa0546090:CDS |
| ACGATATTCAAGGTAGTCTG+AGG | 0.625009 | 4_1:-37278799 | None:intergenic |
| ACTCCCCACCCTATGAAGAA+GGG | 0.637237 | 4_1:+37287339 | Msa0546090:CDS |
| ACTCCCCACCCTATGAAGAA+GGG | 0.639409 | 4_1:+37280861 | Msa0546090:CDS |
| CATGGATATCTTTCTAACCG+CGG | 0.641804 | 4_1:+37284749 | Msa0546090:CDS |
| CTTGAATATCGTTCTAGACG+GGG | 0.652881 | 4_1:+37278810 | Msa0546090:CDS |
| TTGTTGACCAGCTTTGAAGG+AGG | 0.676213 | 4_1:-37287528 | None:intergenic |
| ATCCTGAACTTGCTCCTGTG+AGG | 0.689982 | 4_1:+37285460 | Msa0546090:CDS |
| AAAAGCGAGGATGAAACATG+TGG | 0.698641 | 4_1:-37287645 | None:intergenic |
| GTGGGACAGTTCAGACTCCG+CGG | 0.699135 | 4_1:-37284766 | None:intergenic |
| CCGCTTACTAGCTAAAAGCG+AGG | 0.709641 | 4_1:-37287658 | None:intergenic |
| TAATGATGAGAATCATCCAG+AGG | 0.730201 | 4_1:+37286036 | Msa0546090:CDS |
| TAGGTAGGAACAGAAGCTTG+TGG | 0.741602 | 4_1:-37286402 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTATATTTATATAT+AGG | + | chr4_1:37282999-37283018 | Msa0546090:intron | 0.0% |
| !!! | ATTTTATTTGTTAATATTGA+TGG | + | chr4_1:37279262-37279281 | Msa0546090:intron | 10.0% |
| !! | AAATGAAGAAAAAAAAAAAT+TGG | - | chr4_1:37280645-37280664 | None:intergenic | 10.0% |
| !! | TAATTTATGATACTTAAAAA+TGG | - | chr4_1:37281350-37281369 | None:intergenic | 10.0% |
| !! | AAATAATTTAATTAGATATC+AGG | - | chr4_1:37281679-37281698 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTGCTTATAATAT+GGG | - | chr4_1:37281917-37281936 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTGCTTATAATA+TGG | - | chr4_1:37281918-37281937 | None:intergenic | 10.0% |
| !!! | AGGTTATTTTTATTTTTTTA+GGG | + | chr4_1:37282633-37282652 | Msa0546090:intron | 10.0% |
| !! | AAAAATAAAAATAATAAGAC+AGG | - | chr4_1:37282985-37283004 | None:intergenic | 10.0% |
| !!! | AAAATATTAGTTTACTTTAA+AGG | - | chr4_1:37283134-37283153 | None:intergenic | 10.0% |
| !! | AACATAAGATTATAATAATT+TGG | + | chr4_1:37283486-37283505 | Msa0546090:intron | 10.0% |
| !!! | ATTTTATTTGCATTATTTTA+CGG | - | chr4_1:37283574-37283593 | None:intergenic | 10.0% |
| !! | TTAAAGAAAAAATAATACTT+TGG | - | chr4_1:37283737-37283756 | None:intergenic | 10.0% |
| !!! | TTTTTTAATATATGTACAAT+TGG | + | chr4_1:37283827-37283846 | Msa0546090:intron | 10.0% |
| !!! | ATCTTAATTTGAATTTTTTT+AGG | + | chr4_1:37284134-37284153 | Msa0546090:intron | 10.0% |
| !!! | TATAAATATTACATTGTTTT+GGG | + | chr4_1:37284570-37284589 | Msa0546090:intron | 10.0% |
| !!! | TTATTGTAAGTTTTTTTATT+TGG | + | chr4_1:37285994-37286013 | Msa0546090:intron | 10.0% |
| !!! | TTATTATACTTGTTATCTTT+AGG | + | chr4_1:37278669-37278688 | Msa0546090:intron | 15.0% |
| !! | AAATAACCAAACTTTATTAA+CGG | + | chr4_1:37279168-37279187 | Msa0546090:intron | 15.0% |
| !! | TTAAAAATGTTATATTGTTC+TGG | + | chr4_1:37279438-37279457 | Msa0546090:intron | 15.0% |
| !! | TTATGATAAATTCTTTCATT+TGG | + | chr4_1:37279969-37279988 | Msa0546090:intron | 15.0% |
| !!! | TGTACTTTGATATAATTTTT+TGG | + | chr4_1:37281283-37281302 | Msa0546090:intron | 15.0% |
| !!! | ATCTTTGAAATAAGTTTTAT+AGG | + | chr4_1:37281994-37282013 | Msa0546090:intron | 15.0% |
| !!! | GATGTAAAAATAATTTTCAT+TGG | + | chr4_1:37282019-37282038 | Msa0546090:intron | 15.0% |
| !!! | TTTTAAATTATCTTTTCCAA+AGG | - | chr4_1:37282105-37282124 | None:intergenic | 15.0% |
| !! | TAACTAAATATGATAAAAGT+TGG | + | chr4_1:37282132-37282151 | Msa0546090:intron | 15.0% |
| !!! | TCTTTTTTTGCTTATAATTT+GGG | + | chr4_1:37282155-37282174 | Msa0546090:intron | 15.0% |
| !!! | TTTTTTTTTGCTTGTAATTT+AGG | + | chr4_1:37282193-37282212 | Msa0546090:intron | 15.0% |
| !!! | AAATTAATTTTACTTATGAC+CGG | - | chr4_1:37282298-37282317 | None:intergenic | 15.0% |
| !! | GTGTTGTAAATTAATATATT+TGG | - | chr4_1:37282406-37282425 | None:intergenic | 15.0% |
| !!! | GAGGTTATTTTTATTTTTTT+AGG | + | chr4_1:37282632-37282651 | Msa0546090:intron | 15.0% |
| !!! | ATATAGGATTAAATATGTTT+TGG | + | chr4_1:37283015-37283034 | Msa0546090:intron | 15.0% |
| !!! | AATTTTTATTATGTTCTTGA+CGG | + | chr4_1:37283234-37283253 | Msa0546090:intron | 15.0% |
| !! | GTAGAATATTGAAAAAATAT+CGG | - | chr4_1:37283307-37283326 | None:intergenic | 15.0% |
| !! | GTAATATAGTATTAATTGAA+GGG | - | chr4_1:37283707-37283726 | None:intergenic | 15.0% |
| !! | TGTAATATAGTATTAATTGA+AGG | - | chr4_1:37283708-37283727 | None:intergenic | 15.0% |
| !! | GAGTATAATTCAAAAAATAA+GGG | + | chr4_1:37283878-37283897 | Msa0546090:intron | 15.0% |
| !!! | GTATAAATATTACATTGTTT+TGG | + | chr4_1:37284569-37284588 | Msa0546090:intron | 15.0% |
| !! | ACTCTTGATTTATTATAAAT+TGG | + | chr4_1:37284847-37284866 | Msa0546090:intron | 15.0% |
| !! | AAATGGAAAATGTATAAATT+TGG | - | chr4_1:37287183-37287202 | None:intergenic | 15.0% |
| !! | CTAACTTAACAAAATTATTA+AGG | - | chr4_1:37287464-37287483 | None:intergenic | 15.0% |
| !!! | CTTTATATTAGAGAATGTTT+TGG | + | chr4_1:37278942-37278961 | Msa0546090:intron | 20.0% |
| !!! | ATAAAGTTTGGTTATTTTGA+CGG | - | chr4_1:37279165-37279184 | None:intergenic | 20.0% |
| !! | ACAAATAAAATGAATACAAC+AGG | - | chr4_1:37279253-37279272 | None:intergenic | 20.0% |
| !! | AGATAAATGATAAATTTGTG+AGG | - | chr4_1:37279329-37279348 | None:intergenic | 20.0% |
| !!! | TTATTTCACTTTGTGTTATT+TGG | + | chr4_1:37279481-37279500 | Msa0546090:intron | 20.0% |
| !! | TGCTTTGTATTATACAATTA+GGG | + | chr4_1:37280298-37280317 | Msa0546090:intron | 20.0% |
| !! | AATTAAATTTGTGTTGTAGA+TGG | + | chr4_1:37280816-37280835 | Msa0546090:intron | 20.0% |
| !!! | AAAACATACTTGTTAGAAAT+GGG | - | chr4_1:37280924-37280943 | None:intergenic | 20.0% |
| !!! | AAAAACATACTTGTTAGAAA+TGG | - | chr4_1:37280925-37280944 | None:intergenic | 20.0% |
| !! | AGCATTAAAAAATCACAATT+AGG | - | chr4_1:37281012-37281031 | None:intergenic | 20.0% |
| !! | TACAACCAAGATTTAAATAT+CGG | - | chr4_1:37281224-37281243 | None:intergenic | 20.0% |
| !!! | TTTTAACAATCACTAAATCA+AGG | + | chr4_1:37281569-37281588 | Msa0546090:intron | 20.0% |
| !! | TTTGATTATCCAATAAAACT+TGG | + | chr4_1:37281756-37281775 | Msa0546090:intron | 20.0% |
| !!! | AGAATTCTCTAAAAAAAATC+AGG | + | chr4_1:37281788-37281807 | Msa0546090:intron | 20.0% |
| !! | AAATACTGGTGATAAATTAA+TGG | + | chr4_1:37281875-37281894 | Msa0546090:intron | 20.0% |
| !!! | GTCTTTTTTTGCTTATAATT+TGG | + | chr4_1:37282154-37282173 | Msa0546090:intron | 20.0% |
| !!! | TTGGTCTATATATAACTTTT+AGG | - | chr4_1:37282387-37282406 | None:intergenic | 20.0% |
| !!! | CTAGATAAGATTTTTGAAAT+AGG | + | chr4_1:37282731-37282750 | Msa0546090:intron | 20.0% |
| !!! | AAATAGGATATAGTTTTTTC+TGG | + | chr4_1:37282747-37282766 | Msa0546090:intron | 20.0% |
| !!! | AATAGGATATAGTTTTTTCT+GGG | + | chr4_1:37282748-37282767 | Msa0546090:intron | 20.0% |
| !!! | AGAAATTAAAAGTATGAGAA+TGG | + | chr4_1:37282877-37282896 | Msa0546090:intron | 20.0% |
| !!! | TGCAAACATACAATTTTTTT+AGG | + | chr4_1:37282914-37282933 | Msa0546090:intron | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr4_1:37283673-37283692 | None:intergenic | 20.0% |
| !! | AAACAAATCAATAGTTGATT+AGG | + | chr4_1:37283761-37283780 | Msa0546090:intron | 20.0% |
| !! | AATAGTTGATTAGGATAATT+TGG | + | chr4_1:37283770-37283789 | Msa0546090:intron | 20.0% |
| !! | CGAGTATAATTCAAAAAATA+AGG | + | chr4_1:37283877-37283896 | Msa0546090:intron | 20.0% |
| !! | ATATTTATACTCATCTACTA+GGG | - | chr4_1:37283941-37283960 | None:intergenic | 20.0% |
| !! | TATATTTATACTCATCTACT+AGG | - | chr4_1:37283942-37283961 | None:intergenic | 20.0% |
| !! | ATACAAAATTCGACAAATTA+TGG | - | chr4_1:37284104-37284123 | None:intergenic | 20.0% |
| !!! | TTTTATTTTAAACACCGATT+TGG | + | chr4_1:37284976-37284995 | Msa0546090:intron | 20.0% |
| !! | AAATAATCCAACAAAAGTAA+TGG | + | chr4_1:37285080-37285099 | Msa0546090:intron | 20.0% |
| !! | GATAAATGGTAAAATAGTAA+AGG | - | chr4_1:37285260-37285279 | None:intergenic | 20.0% |
| !! | TTCAAAATGTTATAATGTTC+TGG | + | chr4_1:37285384-37285403 | Msa0546090:intron | 20.0% |
| !!! | AAGAAGTATTTTATCATGTA+CGG | - | chr4_1:37285529-37285548 | None:intergenic | 20.0% |
| !! | ATTAAACCATGTATAAGTAT+TGG | - | chr4_1:37286151-37286170 | None:intergenic | 20.0% |
| !!! | TACATGGTTTAATGTTTTAA+AGG | + | chr4_1:37286158-37286177 | Msa0546090:intron | 20.0% |
| !! | GATAATAAATAACAAAACAG+AGG | - | chr4_1:37286314-37286333 | None:intergenic | 20.0% |
| !!! | CTTTTGTAATATGTAATTAG+AGG | + | chr4_1:37286854-37286873 | Msa0546090:intron | 20.0% |
| !! | ACACAAATGTGAAAAAATAT+TGG | - | chr4_1:37287129-37287148 | None:intergenic | 20.0% |
| !!! | ACGTAGCAATTTTAATATAT+GGG | - | chr4_1:37287737-37287756 | None:intergenic | 20.0% |
| !!! | AACGTAGCAATTTTAATATA+TGG | - | chr4_1:37287738-37287757 | None:intergenic | 20.0% |
| ! | TAATGATGATAATACCGTAA+CGG | - | chr4_1:37278631-37278650 | None:intergenic | 25.0% |
| !! | CAATTTTGAATCCAGAAAAA+TGG | - | chr4_1:37278873-37278892 | None:intergenic | 25.0% |
| ! | TTTCTGGATTCAAAATTGTT+TGG | + | chr4_1:37278875-37278894 | Msa0546090:intron | 25.0% |
| !! | ACAAAAGTATATAACCAATC+AGG | - | chr4_1:37278914-37278933 | None:intergenic | 25.0% |
| !!! | CAATTCGGTTTTTAAAACAT+TGG | - | chr4_1:37279099-37279118 | None:intergenic | 25.0% |
| !!! | CAATGTTTTAAAAACCGAAT+TGG | + | chr4_1:37279097-37279116 | Msa0546090:intron | 25.0% |
| !! | CTTTGTTATCAATTCCAATT+CGG | - | chr4_1:37279114-37279133 | None:intergenic | 25.0% |
| !! | TTGGAATTGATAACAAAGTT+TGG | + | chr4_1:37279116-37279135 | Msa0546090:intron | 25.0% |
| ! | ACACATTTATTAGGATGATA+AGG | - | chr4_1:37279300-37279319 | None:intergenic | 25.0% |
| !! | TTATATTGTTCTGGTTAAGT+TGG | + | chr4_1:37279447-37279466 | Msa0546090:intron | 25.0% |
| !! | TATTTCCTTTTAGCATACAA+TGG | - | chr4_1:37279840-37279859 | None:intergenic | 25.0% |
| ! | AGAGTTTATTTGATTCTTCT+TGG | + | chr4_1:37279875-37279894 | Msa0546090:intron | 25.0% |
| ! | AAAAAATCAATTCTCATACC+AGG | - | chr4_1:37279916-37279935 | None:intergenic | 25.0% |
| !!! | GAGAATTGATTTTTTCTTGT+TGG | + | chr4_1:37279921-37279940 | Msa0546090:intron | 25.0% |
| !!! | TTTTTTCTTGTTGGTATAAG+TGG | + | chr4_1:37279930-37279949 | Msa0546090:intron | 25.0% |
| !!! | TACATGGTTTAATGTTTTGA+AGG | + | chr4_1:37280160-37280179 | Msa0546090:intron | 25.0% |
| ! | AAGAACAAAAAGAGAACAAA+TGG | + | chr4_1:37280194-37280213 | Msa0546090:CDS | 25.0% |
| ! | AGAACAAAAAGAGAACAAAT+GGG | + | chr4_1:37280195-37280214 | Msa0546090:CDS | 25.0% |
| ! | CTGCTTTGTATTATACAATT+AGG | + | chr4_1:37280297-37280316 | Msa0546090:intron | 25.0% |
| ! | GCAACAAAAGATTAAACATA+AGG | + | chr4_1:37280382-37280401 | Msa0546090:intron | 25.0% |
| ! | TTTGAGTATTTATCATGTGA+CGG | - | chr4_1:37280511-37280530 | None:intergenic | 25.0% |
| !! | ATATCTAAAACAGAAAACTG+AGG | - | chr4_1:37280573-37280592 | None:intergenic | 25.0% |
| ! | TTTATCATTCAAACAGAGAA+TGG | - | chr4_1:37280727-37280746 | None:intergenic | 25.0% |
| ! | ACTAAACAAAATCATTCAGA+AGG | - | chr4_1:37280979-37280998 | None:intergenic | 25.0% |
| !!! | GATTTTTTAATGCTATTTCC+AGG | + | chr4_1:37281018-37281037 | Msa0546090:intron | 25.0% |
| !!! | TTTATTTTGTTGACCAGATT+TGG | - | chr4_1:37281054-37281073 | None:intergenic | 25.0% |
| !!! | CATGTTTTAGAGTTAGTATA+TGG | + | chr4_1:37281103-37281122 | Msa0546090:intron | 25.0% |
| !! | TTTAAGGTGAAAACATAGTT+TGG | + | chr4_1:37281173-37281192 | Msa0546090:intron | 25.0% |
| ! | ACAACCAAGATTTAAATATC+GGG | - | chr4_1:37281223-37281242 | None:intergenic | 25.0% |
| !!! | GTAACAAAGTGTTTTTGAAA+TGG | + | chr4_1:37281429-37281448 | Msa0546090:intron | 25.0% |
| ! | TGTCATAAATCGATAGTAAA+AGG | - | chr4_1:37281850-37281869 | None:intergenic | 25.0% |
| ! | TTTATGACAGAGATAAATAC+TGG | + | chr4_1:37281861-37281880 | Msa0546090:intron | 25.0% |
| !! | TTTTTGCTTATAATATGGGA+CGG | - | chr4_1:37281913-37281932 | None:intergenic | 25.0% |
| !!! | CTTTGCATTTAATTTTCCTT+TGG | + | chr4_1:37282086-37282105 | Msa0546090:intron | 25.0% |
| !! | TTTTTGCTTGTAATTTAGGA+CGG | + | chr4_1:37282197-37282216 | Msa0546090:intron | 25.0% |
| !!! | TATAGTTTTTTCTGGGAAAT+AGG | + | chr4_1:37282755-37282774 | Msa0546090:intron | 25.0% |
| ! | AAGTGAAGATGAAAAACTTT+AGG | - | chr4_1:37283102-37283121 | None:intergenic | 25.0% |
| !! | AAGTTTTTCATCTTCACTTT+TGG | + | chr4_1:37283103-37283122 | Msa0546090:intron | 25.0% |
| ! | GTAGCGATTGAAAATTTATA+GGG | + | chr4_1:37283388-37283407 | Msa0546090:intron | 25.0% |
| ! | TTATAGGGATTAAAAGTTGA+AGG | + | chr4_1:37283403-37283422 | Msa0546090:intron | 25.0% |
| ! | TTGAAAGAATAGGATTCAAA+GGG | - | chr4_1:37283980-37283999 | None:intergenic | 25.0% |
| ! | ATTGAAAGAATAGGATTCAA+AGG | - | chr4_1:37283981-37284000 | None:intergenic | 25.0% |
| ! | CCTATTCTTTCAATTTCAAA+CGG | + | chr4_1:37283987-37284006 | Msa0546090:intron | 25.0% |
| !!! | TTGAATTTTTTTAGGTGTTG+AGG | + | chr4_1:37284142-37284161 | Msa0546090:intron | 25.0% |
| !! | TTTCAAGCTTTTATCAGATT+CGG | + | chr4_1:37284349-37284368 | Msa0546090:intron | 25.0% |
| ! | GTAAATTATCAAATTGCTAC+CGG | + | chr4_1:37284487-37284506 | Msa0546090:intron | 25.0% |
| ! | CATAGTTAGTTATCTAACTT+AGG | + | chr4_1:37284545-37284564 | Msa0546090:intron | 25.0% |
| !!! | AATTGTTACTTGTTATCTTC+AGG | + | chr4_1:37284608-37284627 | Msa0546090:intron | 25.0% |
| !! | CGGTGTTTAAAATAAAACAT+TGG | - | chr4_1:37284973-37284992 | None:intergenic | 25.0% |
| !! | CTTTTGTTGGATTATTTGTA+CGG | - | chr4_1:37285077-37285096 | None:intergenic | 25.0% |
| ! | ACAAATAAAATGACTACAAC+AGG | - | chr4_1:37285160-37285179 | None:intergenic | 25.0% |
| ! | AAGAAAGATAGCTAGATAAA+TGG | - | chr4_1:37285274-37285293 | None:intergenic | 25.0% |
| !! | TTATAATGTTCTGGTTAAGA+CGG | + | chr4_1:37285393-37285412 | Msa0546090:intron | 25.0% |
| !! | ATCAGATTCTGATTTTTATG+TGG | + | chr4_1:37285733-37285752 | Msa0546090:CDS | 25.0% |
| !!! | ATGGTTTAATGTTTTAAAGG+TGG | + | chr4_1:37286161-37286180 | Msa0546090:intron | 25.0% |
| !! | AAAATCATACTTGCTAGAAT+TGG | - | chr4_1:37287403-37287422 | None:intergenic | 25.0% |
| !!! | GTATGATTTTTTTTTCCTTC+TGG | + | chr4_1:37287413-37287432 | Msa0546090:intron | 25.0% |
| ! | TCTCTTTATTATAGTGAGTA+TGG | + | chr4_1:37287615-37287634 | Msa0546090:intron | 25.0% |
| ! | GTTTAAGTGAAAACATAGAT+TGG | + | chr4_1:37287687-37287706 | Msa0546090:three_prime_UTR | 25.0% |
| ! | TTGCTACGTTAATTATATCT+TGG | + | chr4_1:37287748-37287767 | Msa0546090:three_prime_UTR | 25.0% |
| !! | TTTATGTTATTTCCCCGTTA+CGG | + | chr4_1:37278614-37278633 | Msa0546090:intron | 30.0% |
| AATGATGATAATACCGTAAC+GGG | - | chr4_1:37278630-37278649 | None:intergenic | 30.0% | |
| ACTTTCAAATACAGAACAAC+AGG | - | chr4_1:37278733-37278752 | None:intergenic | 30.0% | |
| TGTTATAGGAACTCTTACTA+AGG | + | chr4_1:37278768-37278787 | Msa0546090:CDS | 30.0% | |
| TGAACTTTCTCACAATTCAA+AGG | + | chr4_1:37278837-37278856 | Msa0546090:CDS | 30.0% | |
| ! | CAACTAGGTTTTCAAAACAT+TGG | - | chr4_1:37278985-37279004 | None:intergenic | 30.0% |
| !!! | CAATGTTTTGAAAACCTAGT+TGG | + | chr4_1:37278983-37279002 | Msa0546090:intron | 30.0% |
| AAATTTGAACCATGACACAA+AGG | - | chr4_1:37279021-37279040 | None:intergenic | 30.0% | |
| AGGCATGTTACACATTTATT+AGG | - | chr4_1:37279309-37279328 | None:intergenic | 30.0% | |
| ! | AATCAGAGTCTGATTTTTCT+GGG | + | chr4_1:37279699-37279718 | Msa0546090:CDS | 30.0% |
| TGATATTTCACTCAATGAAG+AGG | + | chr4_1:37279724-37279743 | Msa0546090:CDS | 30.0% | |
| ! | AGAGGTATATTAGTAACTTC+AGG | + | chr4_1:37279742-37279761 | Msa0546090:intron | 30.0% |
| TGTTCTTTATGTGTGATTGA+CGG | + | chr4_1:37279789-37279808 | Msa0546090:intron | 30.0% | |
| TCAATCCATTGTATGCTAAA+AGG | + | chr4_1:37279832-37279851 | Msa0546090:intron | 30.0% | |
| TGATTCTTCTTGGTAAACAT+TGG | + | chr4_1:37279885-37279904 | Msa0546090:intron | 30.0% | |
| !!! | ATGGTTTAATGTTTTGAAGG+TGG | + | chr4_1:37280163-37280182 | Msa0546090:intron | 30.0% |
| GAACAAAAAGAGAACAAATG+GGG | + | chr4_1:37280196-37280215 | Msa0546090:CDS | 30.0% | |
| !!! | AGTAGCATTTTTAGCTTTCT+TGG | - | chr4_1:37280246-37280265 | None:intergenic | 30.0% |
| ! | ATAACATTACCAGTCTTTTC+AGG | - | chr4_1:37280269-37280288 | None:intergenic | 30.0% |
| GCACTTAATCAATTAGTGTT+TGG | + | chr4_1:37280344-37280363 | Msa0546090:intron | 30.0% | |
| !! | AACATAAGGTGTTGTTCATA+AGG | + | chr4_1:37280396-37280415 | Msa0546090:intron | 30.0% |
| ATAAGCTAAAAAATGCCTAC+AGG | + | chr4_1:37280440-37280459 | Msa0546090:intron | 30.0% | |
| ! | TTCTAAAAATAAGCACCTGT+AGG | - | chr4_1:37280458-37280477 | None:intergenic | 30.0% |
| !! | TGCATAATGGATCTTTAAAC+AGG | - | chr4_1:37280783-37280802 | None:intergenic | 30.0% |
| AAGATATGATCACTGCATAA+TGG | - | chr4_1:37280796-37280815 | None:intergenic | 30.0% | |
| !!! | TTTTATCCTAGCTTTAGACT+TGG | + | chr4_1:37281138-37281157 | Msa0546090:intron | 30.0% |
| TTGGTACACTGGAAAATTTA+AGG | + | chr4_1:37281157-37281176 | Msa0546090:intron | 30.0% | |
| AACCAAGATTTAAATATCGG+GGG | - | chr4_1:37281221-37281240 | None:intergenic | 30.0% | |
| CAACCAAGATTTAAATATCG+GGG | - | chr4_1:37281222-37281241 | None:intergenic | 30.0% | |
| TTGGTTGTAAATTTGTGTCT+GGG | + | chr4_1:37281235-37281254 | Msa0546090:intron | 30.0% | |
| !!! | TTTTTTCTTAGCAGCGAAAA+AGG | - | chr4_1:37281378-37281397 | None:intergenic | 30.0% |
| GATTATCCAATAAAACTTGG+TGG | + | chr4_1:37281759-37281778 | Msa0546090:intron | 30.0% | |
| !! | TTAGTACCACCAAGTTTTAT+TGG | - | chr4_1:37281768-37281787 | None:intergenic | 30.0% |
| ATCGATAGTAAAAGGAAGAT+GGG | - | chr4_1:37281842-37281861 | None:intergenic | 30.0% | |
| AATCGATAGTAAAAGGAAGA+TGG | - | chr4_1:37281843-37281862 | None:intergenic | 30.0% | |
| TTGTTCCATTTAGCTACTAA+CGG | - | chr4_1:37282242-37282261 | None:intergenic | 30.0% | |
| ! | TAATTTTACTTATGACCGGA+GGG | - | chr4_1:37282294-37282313 | None:intergenic | 30.0% |
| ! | TTAATTTTACTTATGACCGG+AGG | - | chr4_1:37282295-37282314 | None:intergenic | 30.0% |
| TGTGTGTTGAGAAAAAATAG+TGG | + | chr4_1:37282438-37282457 | Msa0546090:intron | 30.0% | |
| GTGTGTTGAGAAAAAATAGT+GGG | + | chr4_1:37282439-37282458 | Msa0546090:intron | 30.0% | |
| !!! | TTTTTTTTTTACCAGCACTC+TGG | + | chr4_1:37282480-37282499 | Msa0546090:intron | 30.0% |
| CTAATACTTGCGTTAAATTC+CGG | + | chr4_1:37282522-37282541 | Msa0546090:intron | 30.0% | |
| AGGGAATAAAGAAGATAAAG+AGG | + | chr4_1:37282584-37282603 | Msa0546090:intron | 30.0% | |
| TAACCTCTTTATCTTCTTTC+TGG | - | chr4_1:37282619-37282638 | None:intergenic | 30.0% | |
| TGAAGATGAAAAACTTTAGG+AGG | - | chr4_1:37283099-37283118 | None:intergenic | 30.0% | |
| CGTAGCGATTGAAAATTTAT+AGG | + | chr4_1:37283387-37283406 | Msa0546090:intron | 30.0% | |
| AAGTTGAAGGAAAATTTCAG+AGG | + | chr4_1:37283416-37283435 | Msa0546090:intron | 30.0% | |
| AGTTGAAGGAAAATTTCAGA+GGG | + | chr4_1:37283417-37283436 | Msa0546090:intron | 30.0% | |
| GGAAAGAAAAGAAAAGAGAA+AGG | + | chr4_1:37283899-37283918 | Msa0546090:intron | 30.0% | |
| AAGAAAAGAAAAGAGAAAGG+CGG | + | chr4_1:37283902-37283921 | Msa0546090:intron | 30.0% | |
| ! | CCGTTTGAAATTGAAAGAAT+AGG | - | chr4_1:37283990-37284009 | None:intergenic | 30.0% |
| ACGAAAAGAAGAAGAAGAAA+TGG | - | chr4_1:37284061-37284080 | None:intergenic | 30.0% | |
| !!! | TTTTTTAGGTGTTGAGGTTA+AGG | + | chr4_1:37284148-37284167 | Msa0546090:intron | 30.0% |
| TATCCCTCATATTGATCATT+GGG | - | chr4_1:37284197-37284216 | None:intergenic | 30.0% | |
| TGAATGTAATCATATGTGTC+TGG | - | chr4_1:37284317-37284336 | None:intergenic | 30.0% | |
| ATGTCTTCAATCAGATGTAT+TGG | - | chr4_1:37284423-37284442 | None:intergenic | 30.0% | |
| AGTAGCATTCTTTGAATTGT+GGG | - | chr4_1:37284787-37284806 | None:intergenic | 30.0% | |
| !! | AATGCTACTGTCTATTTTTC+TGG | + | chr4_1:37284798-37284817 | Msa0546090:CDS | 30.0% |
| !!! | TTTTAAACACCGATTTGGAT+CGG | + | chr4_1:37284981-37285000 | Msa0546090:intron | 30.0% |
| TTATTTGTACGGTCTAATCA+TGG | - | chr4_1:37285066-37285085 | None:intergenic | 30.0% | |
| AATCCAACAAAAGTAATGGT+TGG | + | chr4_1:37285084-37285103 | Msa0546090:intron | 30.0% | |
| !! | CTGTTTTGCTTTGTGTTATT+TGG | + | chr4_1:37285427-37285446 | Msa0546090:intron | 30.0% |
| AATCTTGACTTTCTTTGCAA+AGG | - | chr4_1:37285651-37285670 | None:intergenic | 30.0% | |
| TCAACAATATTACCAGTCTT+TGG | - | chr4_1:37285680-37285699 | None:intergenic | 30.0% | |
| ATTGTTGATCCAGAGAAATA+TGG | + | chr4_1:37285692-37285711 | Msa0546090:CDS | 30.0% | |
| GATATTTCTCCATATTTCTC+TGG | - | chr4_1:37285704-37285723 | None:intergenic | 30.0% | |
| TGATCATTCAATTTCTGATG+AGG | + | chr4_1:37285757-37285776 | Msa0546090:CDS | 30.0% | |
| !!! | TGAGGTATTTTAGTAAGTTC+AGG | + | chr4_1:37285775-37285794 | Msa0546090:intron | 30.0% |
| ATAGTTTATCTGAGTCTTCT+CGG | + | chr4_1:37285905-37285924 | Msa0546090:intron | 30.0% | |
| CTTATGATTGTATTATGCAC+AGG | + | chr4_1:37286120-37286139 | Msa0546090:intron | 30.0% | |
| ! | AGTAGCATTTTGAGCAATAT+AGG | - | chr4_1:37286424-37286443 | None:intergenic | 30.0% |
| ACTACACTAGTACTTATACA+TGG | + | chr4_1:37286588-37286607 | Msa0546090:intron | 30.0% | |
| !!! | AGTAGCAATTTTAGCTTTCT+TGG | - | chr4_1:37286690-37286709 | None:intergenic | 30.0% |
| ! | NNNATCTTACCAGTCTTTTC+AGG | - | chr4_1:37286713-37286732 | None:intergenic | 30.0% |
| AACAGACTTGACATCTAAAA+CGG | - | chr4_1:37287076-37287095 | None:intergenic | 30.0% | |
| CATTCAAACAGAGAATGAAA+TGG | - | chr4_1:37287200-37287219 | None:intergenic | 30.0% | |
| AGAAAATTACAGCACAGATA+TGG | - | chr4_1:37287598-37287617 | None:intergenic | 30.0% | |
| ATGATGATAATACCGTAACG+GGG | - | chr4_1:37278629-37278648 | None:intergenic | 35.0% | |
| !! | TGTTATCTTTAGGTTGCACT+CGG | + | chr4_1:37278679-37278698 | Msa0546090:intron | 35.0% |
| !! | GCTGATCTGAAGTTTGTTAT+AGG | + | chr4_1:37278754-37278773 | Msa0546090:CDS | 35.0% |
| ! | ACCTTGAATATCGTTCTAGA+CGG | + | chr4_1:37278808-37278827 | Msa0546090:CDS | 35.0% |
| CTTCTCTTGCAAAATGTGTT+TGG | + | chr4_1:37279060-37279079 | Msa0546090:intron | 35.0% | |
| AACCAAACTTTATTAACGGC+TGG | + | chr4_1:37279172-37279191 | Msa0546090:intron | 35.0% | |
| AACCAGCCGTTAATAAAGTT+TGG | - | chr4_1:37279177-37279196 | None:intergenic | 35.0% | |
| ! | CTTTATTAACGGCTGGTTAA+AGG | + | chr4_1:37279179-37279198 | Msa0546090:intron | 35.0% |
| GTTCAACTGGCTGAATTATT+TGG | + | chr4_1:37279201-37279220 | Msa0546090:intron | 35.0% | |
| ACTGGCTGAATTATTTGGTT+CGG | + | chr4_1:37279206-37279225 | Msa0546090:intron | 35.0% | |
| !!! | TGGTTCGGTTTTTAACACAT+TGG | + | chr4_1:37279221-37279240 | Msa0546090:intron | 35.0% |
| TTAAGAGACAGTATCTACCA+CGG | - | chr4_1:37279542-37279561 | None:intergenic | 35.0% | |
| ! | ATCAAAAGCTCAAGCTTTGA+AGG | + | chr4_1:37279640-37279659 | Msa0546090:intron | 35.0% |
| ! | GAATCAGAGTCTGATTTTTC+TGG | + | chr4_1:37279698-37279717 | Msa0546090:CDS | 35.0% |
| !!! | TGGTAAACATTGGTTTTACC+TGG | + | chr4_1:37279895-37279914 | Msa0546090:intron | 35.0% |
| !! | CAGTTGATTACCTTTTTAGC+AGG | - | chr4_1:37280066-37280085 | None:intergenic | 35.0% |
| ACTACACTGGTACTTATACA+TGG | + | chr4_1:37280144-37280163 | Msa0546090:intron | 35.0% | |
| !!! | TAATGTTTTGAAGGTGGATG+AGG | + | chr4_1:37280169-37280188 | Msa0546090:intron | 35.0% |
| !!! | AATGTTTTGAAGGTGGATGA+GGG | + | chr4_1:37280170-37280189 | Msa0546090:intron | 35.0% |
| !! | TTTAGCTTTCTTGGTAGGAA+CGG | - | chr4_1:37280237-37280256 | None:intergenic | 35.0% |
| !!! | GCATTTTTAGCTTTCTTGGT+AGG | - | chr4_1:37280242-37280261 | None:intergenic | 35.0% |
| TATACAATTAGGGTCGTGAA+TGG | + | chr4_1:37280308-37280327 | Msa0546090:intron | 35.0% | |
| ATACAATTAGGGTCGTGAAT+GGG | + | chr4_1:37280309-37280328 | Msa0546090:intron | 35.0% | |
| !!! | CAAGTCTGTTTTTACATGCA+TGG | + | chr4_1:37280602-37280621 | Msa0546090:intron | 35.0% |
| !!! | TCTGTTTTTACATGCATGGT+TGG | + | chr4_1:37280606-37280625 | Msa0546090:intron | 35.0% |
| ATTTGTGCCTTCATGATACA+TGG | + | chr4_1:37280661-37280680 | Msa0546090:intron | 35.0% | |
| TACGAATCCATGTATCATGA+AGG | - | chr4_1:37280671-37280690 | None:intergenic | 35.0% | |
| ! | TTTTTCCACCCTTCTTCATA+GGG | - | chr4_1:37280872-37280891 | None:intergenic | 35.0% |
| ! | ATTTTGTTGACCAGATTTGG+AGG | - | chr4_1:37281051-37281070 | None:intergenic | 35.0% |
| AACCCCCGATATTTAAATCT+TGG | + | chr4_1:37281216-37281235 | Msa0546090:intron | 35.0% | |
| CTTGGTTGTAAATTTGTGTC+TGG | + | chr4_1:37281234-37281253 | Msa0546090:intron | 35.0% | |
| ! | GTAAATTTGTGTCTGGGTTT+TGG | + | chr4_1:37281241-37281260 | Msa0546090:intron | 35.0% |
| TAAAAGAAAAGCTTCGCATC+AGG | - | chr4_1:37281319-37281338 | None:intergenic | 35.0% | |
| ! | ATGCGAAGCTTTTCTTTTAC+TGG | + | chr4_1:37281320-37281339 | Msa0546090:intron | 35.0% |
| AAGAAAAAACTACGTGCAAC+TGG | + | chr4_1:37281389-37281408 | Msa0546090:intron | 35.0% | |
| GCACTTGTATTAGAAGAGTT+GGG | - | chr4_1:37281462-37281481 | None:intergenic | 35.0% | |
| TGCACTTGTATTAGAAGAGT+TGG | - | chr4_1:37281463-37281482 | None:intergenic | 35.0% | |
| TGTTCCATTTAGCTACTAAC+GGG | - | chr4_1:37282241-37282260 | None:intergenic | 35.0% | |
| TATAGTAAATACCAGAGTGC+TGG | - | chr4_1:37282494-37282513 | None:intergenic | 35.0% | |
| TCCCTCTATCTTAGTTGTAA+GGG | - | chr4_1:37282569-37282588 | None:intergenic | 35.0% | |
| TTCCCTCTATCTTAGTTGTA+AGG | - | chr4_1:37282570-37282589 | None:intergenic | 35.0% | |
| AGACCAGAAAGAAGATAAAG+AGG | + | chr4_1:37282613-37282632 | Msa0546090:intron | 35.0% | |
| ! | AAATTTTCAATCGCTACGTG+TGG | - | chr4_1:37283385-37283404 | None:intergenic | 35.0% |
| AAACGACACTCATTTCGAAA+CGG | - | chr4_1:37283607-37283626 | None:intergenic | 35.0% | |
| AGAAAAGAAAAGAGAAAGGC+GGG | + | chr4_1:37283903-37283922 | Msa0546090:intron | 35.0% | |
| TCAATTTCAAACGGAACTCA+TGG | + | chr4_1:37283996-37284015 | Msa0546090:intron | 35.0% | |
| ! | GTTTTGTATACCCCAAAACT+CGG | - | chr4_1:37284031-37284050 | None:intergenic | 35.0% |
| ATCATTGGGATCAACTTTGA+CGG | - | chr4_1:37284183-37284202 | None:intergenic | 35.0% | |
| TGATCCCAATGATCAATATG+AGG | + | chr4_1:37284190-37284209 | Msa0546090:intron | 35.0% | |
| GATCCCAATGATCAATATGA+GGG | + | chr4_1:37284191-37284210 | Msa0546090:intron | 35.0% | |
| GTATCCCTCATATTGATCAT+TGG | - | chr4_1:37284198-37284217 | None:intergenic | 35.0% | |
| TAATCATATGTGTCTGGTGT+CGG | - | chr4_1:37284311-37284330 | None:intergenic | 35.0% | |
| GATAATTACAACATCGACAC+CGG | - | chr4_1:37284509-37284528 | None:intergenic | 35.0% | |
| ! | TGTTATCTTCAGGTTACACT+TGG | + | chr4_1:37284618-37284637 | Msa0546090:intron | 35.0% |
| ! | TGATGATCAGAAGTTTGTTC+TGG | + | chr4_1:37284692-37284711 | Msa0546090:CDS | 35.0% |
| ! | GATGATCAGAAGTTTGTTCT+GGG | + | chr4_1:37284693-37284712 | Msa0546090:CDS | 35.0% |
| !! | TGTTCTGGGAACTCTTATTA+AGG | + | chr4_1:37284707-37284726 | Msa0546090:CDS | 35.0% |
| AAGATATCCATGGCAATTTG+AGG | - | chr4_1:37284741-37284760 | None:intergenic | 35.0% | |
| CAGTAGCATTCTTTGAATTG+TGG | - | chr4_1:37284788-37284807 | None:intergenic | 35.0% | |
| TTTCTGGATACAAAGCCTTT+CGG | + | chr4_1:37284814-37284833 | Msa0546090:CDS | 35.0% | |
| ! | GCTTTCTTTAGAGATGTGTA+TGG | + | chr4_1:37284939-37284958 | Msa0546090:intron | 35.0% |
| !! | GAACCAACCATTACTTTTGT+TGG | - | chr4_1:37285090-37285109 | None:intergenic | 35.0% |
| ! | CAAAAGTAATGGTTGGTTCA+AGG | + | chr4_1:37285091-37285110 | Msa0546090:intron | 35.0% |
| TATGAACCAAACGATTCAAC+TGG | - | chr4_1:37285122-37285141 | None:intergenic | 35.0% | |
| ! | TCGTTTGGTTCATAAAACAC+TGG | + | chr4_1:37285128-37285147 | Msa0546090:intron | 35.0% |
| ! | TGGTTCATAAAACACTGGTT+TGG | + | chr4_1:37285133-37285152 | Msa0546090:intron | 35.0% |
| CTTAACTTCTGATGTGTTCT+TGG | + | chr4_1:37285299-37285318 | Msa0546090:intron | 35.0% | |
| AAGATTGTTGATCCAAAGAC+TGG | + | chr4_1:37285665-37285684 | Msa0546090:CDS | 35.0% | |
| !! | GAGAATTGATTTTCTCTTGC+TGG | + | chr4_1:37285950-37285969 | Msa0546090:intron | 35.0% |
| ! | ATTTTCTCTTGCTGGTATAG+TGG | + | chr4_1:37285958-37285977 | Msa0546090:intron | 35.0% |
| TAATGATGAGAATCATCCAG+AGG | + | chr4_1:37286036-37286055 | Msa0546090:CDS | 35.0% | |
| GCTACACCAATACTTATACA+TGG | + | chr4_1:37286142-37286161 | Msa0546090:intron | 35.0% | |
| !!! | TGTTTTAAAGGTGGCGTTAT+CGG | + | chr4_1:37286170-37286189 | Msa0546090:intron | 35.0% |
| TACAATAGTACCTTCTTAGC+AGG | - | chr4_1:37286282-37286301 | None:intergenic | 35.0% | |
| GTATTATGCATAGACTACAC+CGG | + | chr4_1:37286342-37286361 | Msa0546090:intron | 35.0% | |
| !! | TACATGGTTTCGTGTTTTGA+AGG | + | chr4_1:37286371-37286390 | Msa0546090:intron | 35.0% |
| ! | GCATTTTGAGCAATATAGGT+AGG | - | chr4_1:37286420-37286439 | None:intergenic | 35.0% |
| AGTATCACTATCACTCGTAT+CGG | - | chr4_1:37286463-37286482 | None:intergenic | 35.0% | |
| TAGTTGAATACCTTCTTAGC+CGG | - | chr4_1:37286510-37286529 | None:intergenic | 35.0% | |
| !! | TACATGGTTACGAGTTTTGA+AGG | + | chr4_1:37286604-37286623 | Msa0546090:intron | 35.0% |
| GAACAGAAAGAGATCAAATG+AGG | + | chr4_1:37286640-37286659 | Msa0546090:CDS | 35.0% | |
| ! | TATGTAATTAGAGGTGTGAG+CGG | + | chr4_1:37286863-37286882 | Msa0546090:intron | 35.0% |
| TCTGTTGTTAGATGCTTAGT+TGG | + | chr4_1:37287090-37287109 | Msa0546090:intron | 35.0% | |
| ! | TTTTTCCACCCTTCTTCATA+GGG | - | chr4_1:37280872-37280891 | None:intergenic | 35.0% |
| ! | ATCGTGTTACTATTTCCAGA+AGG | - | chr4_1:37287431-37287450 | None:intergenic | 35.0% |
| !! | ATTTTGTTGACCAGCTTTGA+AGG | - | chr4_1:37287534-37287553 | None:intergenic | 35.0% |
| !! | GTTATCTTTAGGTTGCACTC+GGG | + | chr4_1:37278680-37278699 | Msa0546090:intron | 40.0% |
| !! | TTATCTTTAGGTTGCACTCG+GGG | + | chr4_1:37278681-37278700 | Msa0546090:intron | 40.0% |
| ATTCAAGGTAGTCTGAGGAA+AGG | - | chr4_1:37278797-37278816 | None:intergenic | 40.0% | |
| ACGATATTCAAGGTAGTCTG+AGG | - | chr4_1:37278802-37278821 | None:intergenic | 40.0% | |
| ! | CCTTGAATATCGTTCTAGAC+GGG | + | chr4_1:37278809-37278828 | Msa0546090:CDS | 40.0% |
| ! | CTTGAATATCGTTCTAGACG+GGG | + | chr4_1:37278810-37278829 | Msa0546090:CDS | 40.0% |
| GTATCTTTCACACTCCTGAT+TGG | + | chr4_1:37278897-37278916 | Msa0546090:intron | 40.0% | |
| GGTCTCATTTGTTTCCAACT+AGG | - | chr4_1:37279000-37279019 | None:intergenic | 40.0% | |
| CAAATGAGACCTTTGTGTCA+TGG | + | chr4_1:37279009-37279028 | Msa0546090:intron | 40.0% | |
| ! | CGGTTTTTAACACATTGGTC+TGG | + | chr4_1:37279226-37279245 | Msa0546090:intron | 40.0% |
| AAATTCGTACGTGTTCCTTG+TGG | + | chr4_1:37279361-37279380 | Msa0546090:intron | 40.0% | |
| TCAGACTCTGATTCTTCTTC+AGG | - | chr4_1:37279692-37279711 | None:intergenic | 40.0% | |
| !!! | GGCATTTTAGAGTGATACTG+AGG | + | chr4_1:37279990-37280009 | Msa0546090:intron | 40.0% |
| AGAAGAGACTCCTGCTAAAA+AGG | + | chr4_1:37280053-37280072 | Msa0546090:CDS | 40.0% | |
| GTATTCTGCACAAACTACAC+TGG | + | chr4_1:37280131-37280150 | Msa0546090:intron | 40.0% | |
| AAAAAGAGAACAAATGGGGC+TGG | + | chr4_1:37280200-37280219 | Msa0546090:CDS | 40.0% | |
| ! | TTAGCTTTCTTGGTAGGAAC+GGG | - | chr4_1:37280236-37280255 | None:intergenic | 40.0% |
| AATGCTACTCCTGAAAAGAC+TGG | + | chr4_1:37280257-37280276 | Msa0546090:CDS | 40.0% | |
| ! | GTTTTTCCACCCTTCTTCAT+AGG | - | chr4_1:37280873-37280892 | None:intergenic | 40.0% |
| ! | ACTTGTTAGAAATGGGACTC+TGG | - | chr4_1:37280917-37280936 | None:intergenic | 40.0% |
| ! | AGTGTACCAAGTCTAAAGCT+AGG | - | chr4_1:37281147-37281166 | None:intergenic | 40.0% |
| !! | TAGCTTTAGACTTGGTACAC+TGG | + | chr4_1:37281146-37281165 | Msa0546090:intron | 40.0% |
| !! | TTGCTACTCTAGAGTCTTGT+TGG | + | chr4_1:37281652-37281671 | Msa0546090:intron | 40.0% |
| !! | TGCTACTCTAGAGTCTTGTT+GGG | + | chr4_1:37281653-37281672 | Msa0546090:intron | 40.0% |
| TGCTTATAATATGGGACGGA+TGG | - | chr4_1:37281909-37281928 | None:intergenic | 40.0% | |
| ! | TTGCTTGTAATTTAGGACGG+AGG | + | chr4_1:37282200-37282219 | Msa0546090:intron | 40.0% |
| ! | TGCTTGTAATTTAGGACGGA+GGG | + | chr4_1:37282201-37282220 | Msa0546090:intron | 40.0% |
| GTTCCATTTAGCTACTAACG+GGG | - | chr4_1:37282240-37282259 | None:intergenic | 40.0% | |
| ATACTTGCGTTAAATTCCGG+TGG | + | chr4_1:37282525-37282544 | Msa0546090:intron | 40.0% | |
| TAGCAACATCATAACACCAC+CGG | - | chr4_1:37282544-37282563 | None:intergenic | 40.0% | |
| TGCCCTTACAACTAAGATAG+AGG | + | chr4_1:37282564-37282583 | Msa0546090:intron | 40.0% | |
| GCCCTTACAACTAAGATAGA+GGG | + | chr4_1:37282565-37282584 | Msa0546090:intron | 40.0% | |
| GAAAAGAAAAGAGAAAGGCG+GGG | + | chr4_1:37283904-37283923 | Msa0546090:intron | 40.0% | |
| AGAAGAAGAAGAAATGGCGA+TGG | - | chr4_1:37284055-37284074 | None:intergenic | 40.0% | |
| !! | TTAGGTGTTGAGGTTAAGGT+TGG | + | chr4_1:37284152-37284171 | Msa0546090:intron | 40.0% |
| GGGATACATTCACATTTCTC+AGG | + | chr4_1:37284211-37284230 | Msa0546090:intron | 40.0% | |
| ATCCTGTGTCTAACACCTAT+AGG | + | chr4_1:37284282-37284301 | Msa0546090:intron | 40.0% | |
| CATCTGATTGAAGACATGTC+CGG | + | chr4_1:37284426-37284445 | Msa0546090:intron | 40.0% | |
| TACCATACCTCAAATTGCCA+TGG | + | chr4_1:37284731-37284750 | Msa0546090:CDS | 40.0% | |
| ! | ATCCATGGCAATTTGAGGTA+TGG | - | chr4_1:37284736-37284755 | None:intergenic | 40.0% |
| CATGGATATCTTTCTAACCG+CGG | + | chr4_1:37284749-37284768 | Msa0546090:CDS | 40.0% | |
| AGAGTGTGAAAGATACCGAA+AGG | - | chr4_1:37284832-37284851 | None:intergenic | 40.0% | |
| GTCTCAGATCAAGCTGTTTA+GGG | - | chr4_1:37285039-37285058 | None:intergenic | 40.0% | |
| TGTCTCAGATCAAGCTGTTT+AGG | - | chr4_1:37285040-37285059 | None:intergenic | 40.0% | |
| GTTCAACCAGTTGAATCGTT+TGG | + | chr4_1:37285113-37285132 | Msa0546090:intron | 40.0% | |
| ATCAAAAGCTCAAGCTGCAA+AGG | + | chr4_1:37285586-37285605 | Msa0546090:CDS | 40.0% | |
| GGAAAACCTATTGCTGAAAC+TGG | + | chr4_1:37285623-37285642 | Msa0546090:CDS | 40.0% | |
| TGAGTCTTCTCGGTATACTA+TGG | + | chr4_1:37285915-37285934 | Msa0546090:intron | 40.0% | |
| ACGAAACCATGTATAAGCAC+CGG | - | chr4_1:37286364-37286383 | None:intergenic | 40.0% | |
| !!! | ATGGTTTCGTGTTTTGAAGG+TGG | + | chr4_1:37286374-37286393 | Msa0546090:intron | 40.0% |
| TAGTAGTGATGAAGAGACTC+CGG | + | chr4_1:37286488-37286507 | Msa0546090:CDS | 40.0% | |
| !!! | ATGGTTACGAGTTTTGAAGG+TGG | + | chr4_1:37286607-37286626 | Msa0546090:intron | 40.0% |
| ATTGCTACTCCTGAAAAGAC+TGG | + | chr4_1:37286701-37286720 | Msa0546090:CDS | 40.0% | |
| ! | ATGTAATTAGAGGTGTGAGC+GGG | + | chr4_1:37286864-37286883 | Msa0546090:intron | 40.0% |
| TCCAGAGAAGCTATTGCATA+TGG | + | chr4_1:37287027-37287046 | Msa0546090:intron | 40.0% | |
| ACCATATGCAATAGCTTCTC+TGG | - | chr4_1:37287031-37287050 | None:intergenic | 40.0% | |
| ! | GTTTTTCCACCCTTCTTCAT+AGG | - | chr4_1:37280873-37280892 | None:intergenic | 40.0% |
| AACTTCTCAGAATGCTGCAA+AGG | + | chr4_1:37287368-37287387 | Msa0546090:CDS | 40.0% | |
| ACTTCTCAGAATGCTGCAAA+GGG | + | chr4_1:37287369-37287388 | Msa0546090:CDS | 40.0% | |
| ! | ACTTGCTAGAATTGGAAGTC+TGG | - | chr4_1:37287395-37287414 | None:intergenic | 40.0% |
| AAATCACTGACGATTGTGCT+TGG | - | chr4_1:37287564-37287583 | None:intergenic | 40.0% | |
| AAAAGCGAGGATGAAACATG+TGG | - | chr4_1:37287648-37287667 | None:intergenic | 40.0% | |
| ! | CCCGTCTAGAACGATATTCA+AGG | - | chr4_1:37278812-37278831 | None:intergenic | 45.0% |
| !! | GACGCAAGTGTCCATTTTTC+TGG | + | chr4_1:37278859-37278878 | Msa0546090:intron | 45.0% |
| GATGATGACTCTGACAGTTC+TGG | + | chr4_1:37279397-37279416 | Msa0546090:intron | 45.0% | |
| ! | ACCTGAACTTGCTCCTTTGA+TGG | + | chr4_1:37279515-37279534 | Msa0546090:intron | 45.0% |
| TCCATCAAAGGAGCAAGTTC+AGG | - | chr4_1:37279519-37279538 | None:intergenic | 45.0% | |
| TATCTACCACGGTCCATCAA+AGG | - | chr4_1:37279531-37279550 | None:intergenic | 45.0% | |
| !! | GCTTTGAAGGCTGCAAATTC+TGG | + | chr4_1:37279653-37279672 | Msa0546090:CDS | 45.0% |
| ! | GATTCTTCTTCAGGTTCAGC+AGG | - | chr4_1:37279683-37279702 | None:intergenic | 45.0% |
| TCTTCTTCACTCTCACTAGC+AGG | - | chr4_1:37280039-37280058 | None:intergenic | 45.0% | |
| CATTCAAACAGAGAATGGCG+TGG | - | chr4_1:37280722-37280741 | None:intergenic | 45.0% | |
| TTGTTGACCAGATTTGGAGG+TGG | - | chr4_1:37281048-37281067 | None:intergenic | 45.0% | |
| TGTTATAGCGTTACTCCCTC+CGG | + | chr4_1:37282276-37282295 | Msa0546090:intron | 45.0% | |
| GACACTCATTTCGAAACGGA+TGG | - | chr4_1:37283603-37283622 | None:intergenic | 45.0% | |
| TGTATACCCCAAAACTCGGA+CGG | - | chr4_1:37284027-37284046 | None:intergenic | 45.0% | |
| CACCTATAGGTGTTAGACAC+AGG | - | chr4_1:37284287-37284306 | None:intergenic | 45.0% | |
| ! | TCTTCAGGTTACACTTGGAG+AGG | + | chr4_1:37284623-37284642 | Msa0546090:intron | 45.0% |
| CGCGGTTAGAAAGATATCCA+TGG | - | chr4_1:37284751-37284770 | None:intergenic | 45.0% | |
| !! | ACACCGATTTGGATCGGAAA+CGG | + | chr4_1:37284987-37285006 | Msa0546090:intron | 45.0% |
| CATCCGTTTCCGATCCAAAT+CGG | - | chr4_1:37284993-37285012 | None:intergenic | 45.0% | |
| ATGAGTCTCACCAGAAGAGT+CGG | - | chr4_1:37285357-37285376 | None:intergenic | 45.0% | |
| AAAAGCTCAAGCTGCAAAGG+AGG | + | chr4_1:37285589-37285608 | Msa0546090:CDS | 45.0% | |
| ! | AAGGCACCAGTTTCAGCAAT+AGG | - | chr4_1:37285632-37285651 | None:intergenic | 45.0% |
| TGCTGGTATAGTGGCATTCA+AGG | + | chr4_1:37285967-37285986 | Msa0546090:intron | 45.0% | |
| TGAAGAGACTCCTGCTAAGA+AGG | + | chr4_1:37286269-37286288 | Msa0546090:CDS | 45.0% | |
| ACTACACCGGTGCTTATACA+TGG | + | chr4_1:37286355-37286374 | Msa0546090:intron | 45.0% | |
| TAGGTAGGAACAGAAGCTTG+TGG | - | chr4_1:37286405-37286424 | None:intergenic | 45.0% | |
| !!! | CGAGTTTTGAAGGTGGAACA+AGG | + | chr4_1:37286614-37286633 | Msa0546090:intron | 45.0% |
| CTTCTCTGGATCTTGTGTGA+GGG | - | chr4_1:37287017-37287036 | None:intergenic | 45.0% | |
| !! | TTGTTGACCAGCTTTGAAGG+AGG | - | chr4_1:37287531-37287550 | None:intergenic | 45.0% |
| !! | CCTCGCTTTTAGCTAGTAAG+CGG | + | chr4_1:37287658-37287677 | Msa0546090:three_prime_UTR | 45.0% |
| !!! | ATAAGTAAAATTAATTTTTT+AGG | + | chr4_1:37282301-37282320 | Msa0546090:intron | 5.0% |
| !!! | AAAAAAATCTAATTTTTTTT+CGG | - | chr4_1:37283202-37283221 | None:intergenic | 5.0% |
| !! | AAAAAAAATTAACTTAAAAT+AGG | + | chr4_1:37283357-37283376 | Msa0546090:intron | 5.0% |
| !! | AAAAAAATTAACTTAAAATA+GGG | + | chr4_1:37283358-37283377 | Msa0546090:intron | 5.0% |
| !! | TTTAGGTTGCACTCGGGGAA+GGG | + | chr4_1:37278686-37278705 | Msa0546090:intron | 50.0% |
| ! | CGGCTGGTTAAAGGTTCAAC+TGG | + | chr4_1:37279188-37279207 | Msa0546090:intron | 50.0% |
| GTGACGGTGACATAAGCACT+TGG | - | chr4_1:37280495-37280514 | None:intergenic | 50.0% | |
| AACTCCCCACCCTATGAAGA+AGG | + | chr4_1:37280860-37280879 | Msa0546090:CDS | 50.0% | |
| ACTCCCCACCCTATGAAGAA+GGG | + | chr4_1:37280861-37280880 | Msa0546090:CDS | 50.0% | |
| TCCACCCTTCTTCATAGGGT+GGG | - | chr4_1:37280868-37280887 | None:intergenic | 50.0% | |
| TTCCACCCTTCTTCATAGGG+TGG | - | chr4_1:37280869-37280888 | None:intergenic | 50.0% | |
| TGGTTCTTTGCAGGACTCTG+AGG | - | chr4_1:37280897-37280916 | None:intergenic | 50.0% | |
| !! | ATGGGACTCTGGTTCTTTGC+AGG | - | chr4_1:37280906-37280925 | None:intergenic | 50.0% |
| AGGACGGAGGGAGTAATAAG+TGG | + | chr4_1:37282213-37282232 | Msa0546090:intron | 50.0% | |
| GGACCCCGTTAGTAGCTAAA+TGG | + | chr4_1:37282234-37282253 | Msa0546090:intron | 50.0% | |
| AGACACAGGATCAGAGGTCT+TGG | - | chr4_1:37284273-37284292 | None:intergenic | 50.0% | |
| GGTGTTAGACACAGGATCAG+AGG | - | chr4_1:37284279-37284298 | None:intergenic | 50.0% | |
| GACTTTGACTCCGACTCTTC+TGG | + | chr4_1:37285344-37285363 | Msa0546090:CDS | 50.0% | |
| ! | ATCCTGAACTTGCTCCTGTG+AGG | + | chr4_1:37285460-37285479 | Msa0546090:CDS | 50.0% |
| TTCCTCACAGGAGCAAGTTC+AGG | - | chr4_1:37285465-37285484 | None:intergenic | 50.0% | |
| GCAAAGGAGGCTGCTAAATC+TGG | + | chr4_1:37285602-37285621 | Msa0546090:CDS | 50.0% | |
| ! | TCCAGAGGCTCTTGCTATGA+AGG | + | chr4_1:37286051-37286070 | Msa0546090:CDS | 50.0% |
| ACCTTCATAGCAAGAGCCTC+TGG | - | chr4_1:37286055-37286074 | None:intergenic | 50.0% | |
| TGAAGAGACTCCGGCTAAGA+AGG | + | chr4_1:37286497-37286516 | Msa0546090:CDS | 50.0% | |
| CTGGATCTTGTGTGAGGGAT+AGG | - | chr4_1:37287012-37287031 | None:intergenic | 50.0% | |
| GCTTCTCTGGATCTTGTGTG+AGG | - | chr4_1:37287018-37287037 | None:intergenic | 50.0% | |
| TACTCCCCACCCTATGAAGA+AGG | + | chr4_1:37287338-37287357 | Msa0546090:CDS | 50.0% | |
| ACTCCCCACCCTATGAAGAA+GGG | + | chr4_1:37280861-37280880 | Msa0546090:CDS | 50.0% | |
| TCCACCCTTCTTCATAGGGT+GGG | - | chr4_1:37280868-37280887 | None:intergenic | 50.0% | |
| TTCCACCCTTCTTCATAGGG+TGG | - | chr4_1:37280869-37280888 | None:intergenic | 50.0% | |
| !! | AGCTTTGAAGGAGGCAGATC+TGG | - | chr4_1:37287522-37287541 | None:intergenic | 50.0% |
| AGATCTGCCTCCTTCAAAGC+TGG | + | chr4_1:37287521-37287540 | Msa0546090:intron | 50.0% | |
| CCGCTTACTAGCTAAAAGCG+AGG | - | chr4_1:37287661-37287680 | None:intergenic | 50.0% | |
| !! | CTTTAGGTTGCACTCGGGGA+AGG | + | chr4_1:37278685-37278704 | Msa0546090:intron | 55.0% |
| GTACGTGTTCCTTGTGGCAG+TGG | + | chr4_1:37279367-37279386 | Msa0546090:intron | 55.0% | |
| TCATCACCACCACTGCCACA+AGG | - | chr4_1:37279379-37279398 | None:intergenic | 55.0% | |
| ! | CTTGCTCCTTTGATGGACCG+TGG | + | chr4_1:37279522-37279541 | Msa0546090:intron | 55.0% |
| CCACCCTTCTTCATAGGGTG+GGG | - | chr4_1:37280867-37280886 | None:intergenic | 55.0% | |
| TGACCAGATTTGGAGGTGGC+AGG | - | chr4_1:37281044-37281063 | None:intergenic | 55.0% | |
| !!! | TGGAAGCACCGTCCGAGTTT+TGG | + | chr4_1:37284016-37284035 | Msa0546090:intron | 55.0% |
| !!! | GGAAGCACCGTCCGAGTTTT+GGG | + | chr4_1:37284017-37284036 | Msa0546090:intron | 55.0% |
| !!! | GAAGCACCGTCCGAGTTTTG+GGG | + | chr4_1:37284018-37284037 | Msa0546090:intron | 55.0% |
| ! | GTCTGGTGTCGGACACCTAT+AGG | - | chr4_1:37284300-37284319 | None:intergenic | 55.0% |
| CACGTGTGAGAGTCAGACAC+CGG | - | chr4_1:37284448-37284467 | None:intergenic | 55.0% | |
| CTTGCTCCTGTGAGGAAACG+TGG | + | chr4_1:37285468-37285487 | Msa0546090:CDS | 55.0% | |
| CTCCTGTGAGGAAACGTGGT+AGG | + | chr4_1:37285472-37285491 | Msa0546090:intron | 55.0% | |
| CACCTACCACGTTTCCTCAC+AGG | - | chr4_1:37285477-37285496 | None:intergenic | 55.0% | |
| CCACCCTTCTTCATAGGGTG+GGG | - | chr4_1:37280867-37280886 | None:intergenic | 55.0% | |
| CGTGTTCCTTGTGGCAGTGG+TGG | + | chr4_1:37279370-37279389 | Msa0546090:intron | 60.0% | |
| CCCCACCCTATGAAGAAGGG+TGG | + | chr4_1:37280864-37280883 | Msa0546090:CDS | 60.0% | |
| AGATTTGGAGGTGGCAGGCC+TGG | - | chr4_1:37281039-37281058 | None:intergenic | 60.0% | |
| AGGCCTGCCACCTCCAAATC+TGG | + | chr4_1:37281038-37281057 | Msa0546090:intron | 60.0% | |
| GTGGGACAGTTCAGACTCCG+CGG | - | chr4_1:37284769-37284788 | None:intergenic | 60.0% | |
| CCCCACCCTATGAAGAAGGG+TGG | + | chr4_1:37280864-37280883 | Msa0546090:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 37278571 | 37287771 | 37278571 | ID=Msa0546090;Name=Msa0546090 |
| chr4_1 | mRNA | 37278571 | 37287771 | 37278571 | ID=Msa0546090-mRNA-1;Parent=Msa0546090;Name=Msa0546090-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0.57|0.7|0.9|0.94|0.9|20|160|521 |
| chr4_1 | exon | 37278571 | 37278576 | 37278571 | ID=Msa0546090-mRNA-1:exon:9470;Parent=Msa0546090-mRNA-1 |
| chr4_1 | exon | 37278691 | 37278865 | 37278691 | ID=Msa0546090-mRNA-1:exon:9471;Parent=Msa0546090-mRNA-1 |
| chr4_1 | exon | 37279648 | 37279745 | 37279648 | ID=Msa0546090-mRNA-1:exon:9472;Parent=Msa0546090-mRNA-1 |
| chr4_1 | exon | 37280000 | 37280074 | 37280000 | ID=Msa0546090-mRNA-1:exon:9473;Parent=Msa0546090-mRNA-1 |
| chr4_1 | exon | 37280182 | 37280278 | 37280182 | ID=Msa0546090-mRNA-1:exon:9474;Parent=Msa0546090-mRNA-1 |
| chr4_1 | exon | 37280835 | 37280934 | 37280835 | ID=Msa0546090-mRNA-1:exon:9475;Parent=Msa0546090-mRNA-1 |
| chr4_1 | exon | 37282495 | 37282501 | 37282495 | ID=Msa0546090-mRNA-1:exon:9476;Parent=Msa0546090-mRNA-1 |
| chr4_1 | exon | 37284164 | 37284169 | 37284164 | ID=Msa0546090-mRNA-1:exon:9477;Parent=Msa0546090-mRNA-1 |
| chr4_1 | exon | 37284630 | 37284835 | 37284630 | ID=Msa0546090-mRNA-1:exon:9478;Parent=Msa0546090-mRNA-1 |
| chr4_1 | exon | 37285328 | 37285365 | 37285328 | ID=Msa0546090-mRNA-1:exon:9479;Parent=Msa0546090-mRNA-1 |
| chr4_1 | exon | 37285454 | 37285489 | 37285454 | ID=Msa0546090-mRNA-1:exon:9480;Parent=Msa0546090-mRNA-1 |
| chr4_1 | exon | 37285582 | 37285778 | 37285582 | ID=Msa0546090-mRNA-1:exon:9481;Parent=Msa0546090-mRNA-1 |
| chr4_1 | exon | 37286025 | 37286072 | 37286025 | ID=Msa0546090-mRNA-1:exon:9482;Parent=Msa0546090-mRNA-1 |
| chr4_1 | exon | 37286180 | 37286290 | 37286180 | ID=Msa0546090-mRNA-1:exon:9483;Parent=Msa0546090-mRNA-1 |
| chr4_1 | exon | 37286393 | 37286518 | 37286393 | ID=Msa0546090-mRNA-1:exon:9484;Parent=Msa0546090-mRNA-1 |
| chr4_1 | exon | 37286588 | 37286596 | 37286588 | ID=Msa0546090-mRNA-1:exon:9485;Parent=Msa0546090-mRNA-1 |
| chr4_1 | exon | 37286626 | 37286722 | 37286626 | ID=Msa0546090-mRNA-1:exon:9486;Parent=Msa0546090-mRNA-1 |
| chr4_1 | exon | 37287337 | 37287412 | 37287337 | ID=Msa0546090-mRNA-1:exon:9487;Parent=Msa0546090-mRNA-1 |
| chr4_1 | exon | 37287523 | 37287595 | 37287523 | ID=Msa0546090-mRNA-1:exon:9488;Parent=Msa0546090-mRNA-1 |
| chr4_1 | exon | 37287627 | 37287771 | 37287627 | ID=Msa0546090-mRNA-1:exon:9489;Parent=Msa0546090-mRNA-1 |
| chr4_1 | CDS | 37278571 | 37278576 | 37278571 | ID=Msa0546090-mRNA-1:cds;Parent=Msa0546090-mRNA-1 |
| chr4_1 | CDS | 37278691 | 37278865 | 37278691 | ID=Msa0546090-mRNA-1:cds;Parent=Msa0546090-mRNA-1 |
| chr4_1 | CDS | 37279648 | 37279745 | 37279648 | ID=Msa0546090-mRNA-1:cds;Parent=Msa0546090-mRNA-1 |
| chr4_1 | CDS | 37280000 | 37280074 | 37280000 | ID=Msa0546090-mRNA-1:cds;Parent=Msa0546090-mRNA-1 |
| chr4_1 | CDS | 37280182 | 37280278 | 37280182 | ID=Msa0546090-mRNA-1:cds;Parent=Msa0546090-mRNA-1 |
| chr4_1 | CDS | 37280835 | 37280934 | 37280835 | ID=Msa0546090-mRNA-1:cds;Parent=Msa0546090-mRNA-1 |
| chr4_1 | CDS | 37282495 | 37282501 | 37282495 | ID=Msa0546090-mRNA-1:cds;Parent=Msa0546090-mRNA-1 |
| chr4_1 | CDS | 37284164 | 37284169 | 37284164 | ID=Msa0546090-mRNA-1:cds;Parent=Msa0546090-mRNA-1 |
| chr4_1 | CDS | 37284630 | 37284835 | 37284630 | ID=Msa0546090-mRNA-1:cds;Parent=Msa0546090-mRNA-1 |
| chr4_1 | CDS | 37285328 | 37285365 | 37285328 | ID=Msa0546090-mRNA-1:cds;Parent=Msa0546090-mRNA-1 |
| chr4_1 | CDS | 37285454 | 37285489 | 37285454 | ID=Msa0546090-mRNA-1:cds;Parent=Msa0546090-mRNA-1 |
| chr4_1 | CDS | 37285582 | 37285778 | 37285582 | ID=Msa0546090-mRNA-1:cds;Parent=Msa0546090-mRNA-1 |
| chr4_1 | CDS | 37286025 | 37286072 | 37286025 | ID=Msa0546090-mRNA-1:cds;Parent=Msa0546090-mRNA-1 |
| chr4_1 | CDS | 37286180 | 37286290 | 37286180 | ID=Msa0546090-mRNA-1:cds;Parent=Msa0546090-mRNA-1 |
| chr4_1 | CDS | 37286393 | 37286518 | 37286393 | ID=Msa0546090-mRNA-1:cds;Parent=Msa0546090-mRNA-1 |
| chr4_1 | CDS | 37286588 | 37286596 | 37286588 | ID=Msa0546090-mRNA-1:cds;Parent=Msa0546090-mRNA-1 |
| chr4_1 | CDS | 37286626 | 37286722 | 37286626 | ID=Msa0546090-mRNA-1:cds;Parent=Msa0546090-mRNA-1 |
| chr4_1 | CDS | 37287337 | 37287412 | 37287337 | ID=Msa0546090-mRNA-1:cds;Parent=Msa0546090-mRNA-1 |
| chr4_1 | CDS | 37287523 | 37287580 | 37287523 | ID=Msa0546090-mRNA-1:cds;Parent=Msa0546090-mRNA-1 |
| chr4_1 | three_prime_UTR | 37287581 | 37287595 | 37287581 | ID=Msa0546090-mRNA-1:three_prime_utr;Parent=Msa0546090-mRNA-1 |
| chr4_1 | three_prime_UTR | 37287627 | 37287771 | 37287627 | ID=Msa0546090-mRNA-1:three_prime_utr;Parent=Msa0546090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
