Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109310 | MBA0666507.1 | 66.009 | 456 | 112 | 7 | 1 | 438 | 1 | 431 | 0.0 | 563 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109310 | sp|P49204|RS42_ARATH | 90.875 | 263 | 23 | 1 | 181 | 443 | 1 | 262 | 0.0 | 513 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109310 | A0A7J8VUM1 | 66.009 | 456 | 112 | 7 | 1 | 438 | 1 | 431 | 0.0 | 563 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0040220 | Msa1109310 | 0.836584 | 8.588159e-57 | -8.615850e-47 |
| Msa0087910 | Msa1109310 | 0.847953 | 8.343996e-60 | -8.615850e-47 |
| Msa0114600 | Msa1109310 | 0.829974 | 3.812938e-55 | -8.615850e-47 |
| Msa0681220 | Msa1109310 | 0.801069 | 1.071600e-48 | -8.615850e-47 |
| Msa0790450 | Msa1109310 | 0.806730 | 7.137681e-50 | -8.615850e-47 |
| Msa0134580 | Msa1109310 | 0.857751 | 1.318706e-62 | -8.615850e-47 |
| Msa0192050 | Msa1109310 | 0.812623 | 3.863017e-51 | -8.615850e-47 |
| Msa0194940 | Msa1109310 | 0.825376 | 4.849278e-54 | -8.615850e-47 |
| Msa0388250 | Msa1109310 | 0.820352 | 7.177205e-53 | -8.615850e-47 |
| Msa0416210 | Msa1109310 | 0.825479 | 4.583087e-54 | -8.615850e-47 |
| Msa0419710 | Msa1109310 | 0.809581 | 1.763335e-50 | -8.615850e-47 |
| Msa0426250 | Msa1109310 | 0.819860 | 9.305165e-53 | -8.615850e-47 |
| Msa0433630 | Msa1109310 | 0.801897 | 7.247669e-49 | -8.615850e-47 |
| Msa0450150 | Msa1109310 | 0.805654 | 1.202501e-49 | -8.615850e-47 |
| Msa0475810 | Msa1109310 | 0.821922 | 3.120888e-53 | -8.615850e-47 |
| Msa1000780 | Msa1109310 | 0.816758 | 4.687597e-52 | -8.615850e-47 |
| Msa1019090 | Msa1109310 | 0.826365 | 2.824239e-54 | -8.615850e-47 |
| Msa1025200 | Msa1109310 | 0.899588 | 1.708379e-77 | -8.615850e-47 |
| Msa1025220 | Msa1109310 | 0.876508 | 1.321127e-68 | -8.615850e-47 |
| Msa1050100 | Msa1109310 | 0.834624 | 2.690938e-56 | -8.615850e-47 |
| Msa0277600 | Msa1109310 | 0.800813 | 1.208368e-48 | -8.615850e-47 |
| Msa1109310 | Msa1126690 | 0.811892 | 5.576827e-51 | -8.615850e-47 |
| Msa1109310 | Msa1203560 | 0.847138 | 1.397982e-59 | -8.615850e-47 |
| Msa1109310 | Msa1255830 | 0.830207 | 3.343495e-55 | -8.615850e-47 |
| Msa1109310 | Msa1255850 | 0.852213 | 5.350763e-61 | -8.615850e-47 |
| Msa1109310 | Msa1296090 | 0.815034 | 1.136535e-51 | -8.615850e-47 |
| Msa1109310 | Msa1311400 | 0.803790 | 2.946638e-49 | -8.615850e-47 |
| Msa1109310 | Msa1330730 | 0.819177 | 1.331908e-52 | -8.615850e-47 |
| Msa1109310 | Msa1351020 | 0.803091 | 4.113531e-49 | -8.615850e-47 |
| Msa1109310 | Msa1399190 | 0.805449 | 1.327865e-49 | -8.615850e-47 |
| Msa1109310 | Msa1450560 | 0.808573 | 2.898414e-50 | -8.615850e-47 |
| Msa0546090 | Msa1109310 | 0.803790 | 2.945816e-49 | -8.615850e-47 |
| Msa0573550 | Msa1109310 | 0.817475 | 3.234848e-52 | -8.615850e-47 |
| Msa0926310 | Msa1109310 | 0.804931 | 1.704304e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109310 | MtrunA17_Chr7g0243211 | 96.981 | 265 | 8 | 0 | 181 | 445 | 1 | 265 | 0.0 | 538 |
| Msa1109310 | MtrunA17_Chr4g0005611 | 96.604 | 265 | 8 | 1 | 181 | 445 | 1 | 264 | 0.0 | 531 |
| Msa1109310 | MtrunA17_Chr5g0403311 | 96.016 | 251 | 10 | 0 | 181 | 431 | 1 | 251 | 0.0 | 507 |
| Msa1109310 | MtrunA17_Chr8g0357951 | 96.016 | 251 | 10 | 0 | 181 | 431 | 1 | 251 | 0.0 | 507 |
| Msa1109310 | MtrunA17_Chr7g0243201 | 87.568 | 185 | 18 | 3 | 1 | 183 | 12 | 193 | 4.57e-89 | 269 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109310 | AT5G07090.1 | 90.875 | 263 | 23 | 1 | 181 | 443 | 1 | 262 | 0.0 | 513 |
| Msa1109310 | AT2G17360.1 | 90.769 | 260 | 24 | 0 | 181 | 440 | 1 | 260 | 0.0 | 512 |
| Msa1109310 | AT5G58420.1 | 90.875 | 263 | 23 | 1 | 181 | 443 | 1 | 262 | 0.0 | 511 |
| Msa1109310 | AT5G07090.3 | 90.612 | 245 | 22 | 1 | 199 | 443 | 1 | 244 | 7.79e-169 | 474 |
| Msa1109310 | AT5G07090.2 | 90.612 | 245 | 22 | 1 | 199 | 443 | 1 | 244 | 7.79e-169 | 474 |
| Msa1109310 | AT2G17360.2 | 91.160 | 181 | 16 | 0 | 181 | 361 | 1 | 181 | 9.25e-124 | 357 |
Find 124 sgRNAs with CRISPR-Local
Find 490 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTTAGCATCTTCTCTTT+TGG | 0.160903 | 7_3:-52817595 | None:intergenic |
| GTAGTAACTTTCTCAGTTCT+TGG | 0.226486 | 7_3:-52817741 | None:intergenic |
| TTGTGTCATTGGCCTTAATA+AGG | 0.244306 | 7_3:-52825123 | None:intergenic |
| GAAAGGGATCATCAGCAATT+TGG | 0.303625 | 7_3:+52817827 | Msa1109310:CDS |
| TTCATTGGAGGAAACATATT+AGG | 0.308006 | 7_3:-52817552 | None:intergenic |
| AGTATCACAAACGATTTAAA+TGG | 0.322069 | 7_3:-52825498 | None:intergenic |
| GTCTAGTTTGATTGTGTCAT+TGG | 0.330535 | 7_3:-52825134 | None:intergenic |
| CAATTTGATACCTCTGCCTT+TGG | 0.334135 | 7_3:-52825383 | None:intergenic |
| CTATCCTGATCCCCTTATTA+AGG | 0.341569 | 7_3:+52825111 | Msa1109310:CDS |
| AAATGAAGTTCTTGAGAAAA+AGG | 0.345316 | 7_3:+52817779 | Msa1109310:CDS |
| ATTGCGAGTTTCAACGCTTC+AGG | 0.346583 | 7_3:+52825698 | Msa1109310:three_prime_UTR |
| TTCTCAGTTCTTGGACTTGA+AGG | 0.346678 | 7_3:-52817732 | None:intergenic |
| CACATCAAATTTGATGAAAT+CGG | 0.353228 | 7_3:-52825176 | None:intergenic |
| AAGGTACGATCTGTTCAGTT+TGG | 0.367239 | 7_3:+52825040 | Msa1109310:CDS |
| CAGCGCCATGTTCTAGTTGA+TGG | 0.370577 | 7_3:+52824546 | Msa1109310:CDS |
| TGTGGTCCAGATGACGGCTT+TGG | 0.371859 | 7_3:-52824432 | None:intergenic |
| ATTTGAATACATTATATTGT+TGG | 0.375287 | 7_3:+52825466 | Msa1109310:three_prime_UTR |
| AGGTACGATCTGTTCAGTTT+GGG | 0.392472 | 7_3:+52825041 | Msa1109310:CDS |
| GTGGTCCAGATGACGGCTTT+GGG | 0.392493 | 7_3:-52824431 | None:intergenic |
| TATCAAAATCGTGATACAAT+TGG | 0.404044 | 7_3:-52825641 | None:intergenic |
| TGATGTGGGGAATGTTGTTA+TGG | 0.412773 | 7_3:+52825192 | Msa1109310:CDS |
| CATGAGTTTGCAACCCGATT+GGG | 0.418547 | 7_3:+52825313 | Msa1109310:CDS |
| GGGAATGTTGTTATGGTGAC+TGG | 0.420835 | 7_3:+52825199 | Msa1109310:CDS |
| TTCTAGTTGATGGCAAAGTT+AGG | 0.423367 | 7_3:+52824556 | Msa1109310:CDS |
| GCGGATTGTACGCCCATCAT+AGG | 0.425274 | 7_3:-52825089 | None:intergenic |
| TGTGTCATTGGCCTTAATAA+GGG | 0.427302 | 7_3:-52825122 | None:intergenic |
| GATAACAATGGTGGAGAGAA+AGG | 0.430534 | 7_3:+52817810 | Msa1109310:CDS |
| CAGGCCCCAAAGCCGTCATC+TGG | 0.431538 | 7_3:+52824426 | Msa1109310:intron |
| TATGATTATCGTGCGCTGCT+TGG | 0.434612 | 7_3:+52825668 | Msa1109310:three_prime_UTR |
| GCGGATGGCTGCTTCTCAAC+AGG | 0.434949 | 7_3:+52825429 | Msa1109310:CDS |
| CCGTATCTGAACACCTATGA+TGG | 0.435718 | 7_3:+52825076 | Msa1109310:CDS |
| TTGGCAAAGGTTCGAAACCT+TGG | 0.443017 | 7_3:+52825350 | Msa1109310:CDS |
| TTATCAAGCATCCAATGCTT+TGG | 0.443903 | 7_3:-52824291 | None:intergenic |
| AATTTGATACCTCTGCCTTT+GGG | 0.446445 | 7_3:-52825382 | None:intergenic |
| CTGTTCAGTTTGGGCAGAAA+GGG | 0.449618 | 7_3:+52825050 | Msa1109310:CDS |
| ATGATTATCGTGCGCTGCTT+GGG | 0.450059 | 7_3:+52825669 | Msa1109310:three_prime_UTR |
| GAAGAAGGTAAAGACAGTTC+AGG | 0.450499 | 7_3:+52817666 | Msa1109310:CDS |
| TTAGTCTGTTCCTCAAGATA+AGG | 0.453432 | 7_3:-52824482 | None:intergenic |
| TGGCAAAGGTTCGAAACCTT+GGG | 0.458266 | 7_3:+52825351 | Msa1109310:CDS |
| CATCTGGACCACACAAATCA+AGG | 0.461785 | 7_3:+52824442 | Msa1109310:CDS |
| ATGAATCAAAATTCACAAGA+TGG | 0.467621 | 7_3:+52817570 | Msa1109310:CDS |
| GCTAATGGTGGCACTGGCAA+TGG | 0.473441 | 7_3:+52817957 | Msa1109310:CDS |
| GATTCCGTCTCCACTCTGTA+AGG | 0.474226 | 7_3:+52824858 | Msa1109310:CDS |
| CGTCTTCTCTATGACACTAA+AGG | 0.477358 | 7_3:+52824833 | Msa1109310:CDS |
| TGGACTTGAAGGAGTTATGA+AGG | 0.477390 | 7_3:-52817721 | None:intergenic |
| TGAAGAAGTTGTGGTGGAGA+AGG | 0.480708 | 7_3:+52817878 | Msa1109310:CDS |
| TTGGGTAATGTCTTCACCAT+TGG | 0.482231 | 7_3:+52825331 | Msa1109310:CDS |
| TTGGCCTTAATAAGGGGATC+AGG | 0.486385 | 7_3:-52825115 | None:intergenic |
| GGTGGCACTGGCAATGGCGG+TGG | 0.487756 | 7_3:+52817963 | Msa1109310:CDS |
| TGGTGAAGACATTACCCAAT+CGG | 0.492186 | 7_3:-52825327 | None:intergenic |
| TCTGTTCAGTTTGGGCAGAA+AGG | 0.500744 | 7_3:+52825049 | Msa1109310:CDS |
| CGATTTCATCAAATTTGATG+TGG | 0.506182 | 7_3:+52825177 | Msa1109310:CDS |
| GTTACTACTCAAGATGAAAG+TGG | 0.511479 | 7_3:+52817756 | Msa1109310:CDS |
| ATTCATGTCCAGGATGCTAC+TGG | 0.515866 | 7_3:+52825289 | Msa1109310:CDS |
| AATGAGGCTAATGGTGGCAC+TGG | 0.516689 | 7_3:+52817951 | Msa1109310:CDS |
| TCATGAGTTTGCAACCCGAT+TGG | 0.519695 | 7_3:+52825312 | Msa1109310:CDS |
| TGAATCAAAATTCACAAGAT+GGG | 0.520638 | 7_3:+52817571 | Msa1109310:CDS |
| ACTCATGACCAGTAGCATCC+TGG | 0.521067 | 7_3:-52825297 | None:intergenic |
| AAGACAGAGAATGAGGCTAA+TGG | 0.521835 | 7_3:+52817942 | Msa1109310:CDS |
| GGTGAAGACATTACCCAATC+GGG | 0.525214 | 7_3:-52825326 | None:intergenic |
| GATTTCATCAAATTTGATGT+GGG | 0.526677 | 7_3:+52825178 | Msa1109310:CDS |
| TGCCGTTGATCCTTATCTTG+AGG | 0.528952 | 7_3:+52824472 | Msa1109310:CDS |
| GGCTCAATGCTCCAAAGCAT+TGG | 0.529449 | 7_3:+52824280 | Msa1109310:CDS |
| CCATCATAGGTGTTCAGATA+CGG | 0.529767 | 7_3:-52825076 | None:intergenic |
| ATAGTTGCCTCATCTGCTGT+TGG | 0.532210 | 7_3:-52818352 | None:intergenic |
| TGACACAATCAAACTAGACT+TGG | 0.533545 | 7_3:+52825138 | Msa1109310:CDS |
| AATGGTGGCACTGGCAATGG+CGG | 0.536126 | 7_3:+52817960 | Msa1109310:CDS |
| GGTAAAGACAGTTCAGGTGG+TGG | 0.538042 | 7_3:+52817672 | Msa1109310:CDS |
| AGGTTTCGAACCTTTGCCAA+TGG | 0.539790 | 7_3:-52825347 | None:intergenic |
| GAGATTGAAGACAGAGAATG+AGG | 0.540066 | 7_3:+52817935 | Msa1109310:CDS |
| GACATTGTTTCTCATTTACC+AGG | 0.540111 | 7_3:+52817999 | Msa1109310:CDS |
| AAAGACAGTTCAGGTGGTGG+AGG | 0.547845 | 7_3:+52817675 | Msa1109310:CDS |
| AATGTCTTCACCATTGGCAA+AGG | 0.551816 | 7_3:+52825337 | Msa1109310:CDS |
| AGTAGCATCCTGGACATGAA+TGG | 0.557858 | 7_3:-52825287 | None:intergenic |
| CATTGGATGCTTGATAAGCT+TGG | 0.558832 | 7_3:+52824297 | Msa1109310:CDS |
| TCTCGTGTATTTCAGGCAAG+AGG | 0.559812 | 7_3:+52824237 | Msa1109310:intron |
| TGGATGCTTGATAAGCTTGG+TGG | 0.561385 | 7_3:+52824300 | Msa1109310:CDS |
| TGACCGTCATTGAGGAGGCT+AGG | 0.563524 | 7_3:+52825404 | Msa1109310:CDS |
| CCCATACCCATAAAACCAGC+AGG | 0.563703 | 7_3:-52824594 | None:intergenic |
| GATTTGTGTGGTCCAGATGA+CGG | 0.567229 | 7_3:-52824438 | None:intergenic |
| ATTTCATCAAATTTGATGTG+GGG | 0.571477 | 7_3:+52825179 | Msa1109310:CDS |
| TGCAGCTCCAACAGCAGATG+AGG | 0.576237 | 7_3:+52818345 | Msa1109310:CDS |
| GTGTCATTGGCCTTAATAAG+GGG | 0.578877 | 7_3:-52825121 | None:intergenic |
| AAGATGAAACAAGAAGAAGA+AGG | 0.579650 | 7_3:+52817651 | Msa1109310:CDS |
| ATAACAATGGTGGAGAGAAA+GGG | 0.582746 | 7_3:+52817811 | Msa1109310:CDS |
| TCAAGATAAGGATCAACGGC+AGG | 0.583177 | 7_3:-52824470 | None:intergenic |
| CATCCCTTACAGAGTGGAGA+CGG | 0.583231 | 7_3:-52824862 | None:intergenic |
| CTTTAGTGTCATAGAGAAGA+CGG | 0.588339 | 7_3:-52824832 | None:intergenic |
| TATCAAATTGACCGTCATTG+AGG | 0.588863 | 7_3:+52825396 | Msa1109310:CDS |
| AACATGGCGCTGCATCAAGA+TGG | 0.592027 | 7_3:-52824535 | None:intergenic |
| CGTATCTGAACACCTATGAT+GGG | 0.593211 | 7_3:+52825077 | Msa1109310:CDS |
| GAAGAGGTTGATAACAATGG+TGG | 0.595682 | 7_3:+52817801 | Msa1109310:CDS |
| AGGCACTCCCTTGATTTGTG+TGG | 0.597394 | 7_3:-52824450 | None:intergenic |
| GTTGCAGTTTAAGCTTTGCA+AGG | 0.598067 | 7_3:+52825021 | Msa1109310:intron |
| CTTCCTAGCCTCCTCAATGA+CGG | 0.598313 | 7_3:-52825407 | None:intergenic |
| CTTCATCATCCCTTACAGAG+TGG | 0.602533 | 7_3:-52824868 | None:intergenic |
| TGTAAGGGATGATGAAGCAA+AGG | 0.603418 | 7_3:+52824874 | Msa1109310:CDS |
| ATTCCGTCTCCACTCTGTAA+GGG | 0.605035 | 7_3:+52824859 | Msa1109310:CDS |
| GTTTGAAGAAACATTTGAAG+CGG | 0.606217 | 7_3:+52824259 | Msa1109310:CDS |
| GATGGCTGCTTCTCAACAGG+TGG | 0.606348 | 7_3:+52825432 | Msa1109310:CDS |
| GTGTCTCTTCCCAAAGGCAG+AGG | 0.606870 | 7_3:+52825373 | Msa1109310:CDS |
| CTTTGCCATCAACTAGAACA+TGG | 0.608587 | 7_3:-52824551 | None:intergenic |
| AAGGAAGAGGTTGATAACAA+TGG | 0.614282 | 7_3:+52817798 | Msa1109310:CDS |
| ACGTGAGTGTGAAGAAGTTG+TGG | 0.617686 | 7_3:+52817869 | Msa1109310:CDS |
| GGAAGGAACAGAGGTCGTGT+TGG | 0.620629 | 7_3:+52825223 | Msa1109310:CDS |
| TCATTGAGGAGGCTAGGAAG+CGG | 0.621155 | 7_3:+52825410 | Msa1109310:CDS |
| GAAGGTAAAGACAGTTCAGG+TGG | 0.623953 | 7_3:+52817669 | Msa1109310:CDS |
| TTCCTCAAGATAAGGATCAA+CGG | 0.626091 | 7_3:-52824474 | None:intergenic |
| CAAATTGACCGTCATTGAGG+AGG | 0.630124 | 7_3:+52825399 | Msa1109310:CDS |
| ATCTGGACCACACAAATCAA+GGG | 0.632532 | 7_3:+52824443 | Msa1109310:CDS |
| TGGTCCAGATGACGGCTTTG+GGG | 0.632723 | 7_3:-52824430 | None:intergenic |
| TGAGGAGGCTAGGAAGCGGA+TGG | 0.633594 | 7_3:+52825414 | Msa1109310:CDS |
| AAGGGAAGGGCATAAACTTG+TGG | 0.633621 | 7_3:-52825721 | None:intergenic |
| ACACAAAATACTATGGAAGA+CGG | 0.634023 | 7_3:+52817516 | None:intergenic |
| ACAGACAAGACATATCCTGC+TGG | 0.635500 | 7_3:+52824579 | Msa1109310:CDS |
| CCTTGGGTGTCTCTTCCCAA+AGG | 0.641736 | 7_3:+52825367 | Msa1109310:CDS |
| TGAGTGTGAAGAAGTTGTGG+TGG | 0.650095 | 7_3:+52817872 | Msa1109310:CDS |
| TAATAAGGGGATCAGGATAG+CGG | 0.659430 | 7_3:-52825108 | None:intergenic |
| ACAGAGAATGAGGCTAATGG+TGG | 0.667393 | 7_3:+52817945 | Msa1109310:CDS |
| CCTTTGGGAAGAGACACCCA+AGG | 0.673569 | 7_3:-52825367 | None:intergenic |
| TTGTTATGGTGACTGGAGGA+AGG | 0.681094 | 7_3:+52825206 | Msa1109310:CDS |
| AATGTTGTTATGGTGACTGG+AGG | 0.681623 | 7_3:+52825202 | Msa1109310:CDS |
| AAGAACAGAGAAAAGCACAA+AGG | 0.704006 | 7_3:+52825253 | Msa1109310:CDS |
| GTGACTGGAGGAAGGAACAG+AGG | 0.708346 | 7_3:+52825214 | Msa1109310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGTTAGAAAAAATAATTT+AGG | + | chr7_3:52818241-52818260 | Msa1109310:intron | 10.0% |
| !! | ATTAAACTAAATATTATGAT+CGG | - | chr7_3:52819037-52819056 | None:intergenic | 10.0% |
| !! | TGAATGAATAAAAAAAATTA+AGG | + | chr7_3:52820403-52820422 | Msa1109310:intron | 10.0% |
| !!! | TTTTAAACAAAAATAGTTTA+TGG | - | chr7_3:52821505-52821524 | None:intergenic | 10.0% |
| !!! | TTTCTTTATTTTTTTCAAAT+GGG | - | chr7_3:52821544-52821563 | None:intergenic | 10.0% |
| !!! | TTTTCTTTATTTTTTTCAAA+TGG | - | chr7_3:52821545-52821564 | None:intergenic | 10.0% |
| !!! | TTAAAAAGAATTTTGTATAT+GGG | - | chr7_3:52821610-52821629 | None:intergenic | 10.0% |
| !!! | ATCAAATTTTTTTTAGTAAA+TGG | + | chr7_3:52822617-52822636 | Msa1109310:intron | 10.0% |
| !!! | AAAAAAATCTAGAATTTATT+TGG | - | chr7_3:52822695-52822714 | None:intergenic | 10.0% |
| !!! | AATTTTTTACTTTGAATAAT+TGG | + | chr7_3:52824659-52824678 | Msa1109310:intron | 10.0% |
| !! | TTATAAAATCAATATAAAGA+AGG | - | chr7_3:52824980-52824999 | None:intergenic | 10.0% |
| !! | AACAAATTGTTAAAAACTAA+AGG | + | chr7_3:52818029-52818048 | Msa1109310:intron | 15.0% |
| !! | ACAAATTGTTAAAAACTAAA+GGG | + | chr7_3:52818030-52818049 | Msa1109310:intron | 15.0% |
| !! | TTAAACTAAATATTATGATC+GGG | - | chr7_3:52819036-52819055 | None:intergenic | 15.0% |
| !!! | TTTTTTAACAAATGTTCTTT+GGG | + | chr7_3:52819099-52819118 | Msa1109310:intron | 15.0% |
| !!! | AAACAAAAATTCACTTTTTT+AGG | - | chr7_3:52819560-52819579 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTATATTTATGAC+AGG | + | chr7_3:52819571-52819590 | Msa1109310:intron | 15.0% |
| !!! | TTTAATTTTTTTTGTGCAAA+AGG | + | chr7_3:52819870-52819889 | Msa1109310:intron | 15.0% |
| !!! | TTAATTTTTTTTGTGCAAAA+GGG | + | chr7_3:52819871-52819890 | Msa1109310:intron | 15.0% |
| !!! | CTTAAAATTCTAAAATTACT+AGG | - | chr7_3:52820169-52820188 | None:intergenic | 15.0% |
| !! | TTAACAAAATTGTAAAGATT+TGG | + | chr7_3:52820209-52820228 | Msa1109310:intron | 15.0% |
| !! | ATTACATATAATATATGAGA+GGG | - | chr7_3:52820237-52820256 | None:intergenic | 15.0% |
| !! | AATTACATATAATATATGAG+AGG | - | chr7_3:52820238-52820257 | None:intergenic | 15.0% |
| !!! | GGTATAATTTTTTTTTTTTG+AGG | + | chr7_3:52820877-52820896 | Msa1109310:intron | 15.0% |
| !!! | AACAAGTGAAATTATAATTT+TGG | - | chr7_3:52820985-52821004 | None:intergenic | 15.0% |
| !! | ATAAAGAAAAGTAAATTCTT+AGG | + | chr7_3:52821555-52821574 | Msa1109310:intron | 15.0% |
| !!! | GTTAAAAAGAATTTTGTATA+TGG | - | chr7_3:52821611-52821630 | None:intergenic | 15.0% |
| !!! | AACATTATTATTTTTTCTGA+TGG | + | chr7_3:52822233-52822252 | Msa1109310:intron | 15.0% |
| !!! | TTTTTTTTTTCAAAAACATG+TGG | + | chr7_3:52822568-52822587 | Msa1109310:intron | 15.0% |
| !! | ATGTTCAATATGTATAAAAA+AGG | - | chr7_3:52822763-52822782 | None:intergenic | 15.0% |
| !!! | TTTTTTTTAGTTTTCTTTAC+TGG | + | chr7_3:52822858-52822877 | Msa1109310:intron | 15.0% |
| !!! | TTTTTTTAGTTTTCTTTACT+GGG | + | chr7_3:52822859-52822878 | Msa1109310:intron | 15.0% |
| !! | AAATATTATAGATATTGTGA+AGG | - | chr7_3:52824910-52824929 | None:intergenic | 15.0% |
| !! | ATTTGAATACATTATATTGT+TGG | + | chr7_3:52825466-52825485 | Msa1109310:three_prime_UTR | 15.0% |
| !! | AAAGTAGTAAAAAATTACCA+TGG | - | chr7_3:52818128-52818147 | None:intergenic | 20.0% |
| !! | TAACAAACTAATTCAATTCA+AGG | - | chr7_3:52818201-52818220 | None:intergenic | 20.0% |
| !!! | TTTTATCATATACTTTGATG+AGG | + | chr7_3:52818265-52818284 | Msa1109310:intron | 20.0% |
| !! | TTTATCATATACTTTGATGA+GGG | + | chr7_3:52818266-52818285 | Msa1109310:intron | 20.0% |
| !! | TACAAAAATCCATTCTTATA+GGG | + | chr7_3:52818630-52818649 | Msa1109310:intron | 20.0% |
| !! | TAGTCTATCTAAAAAAAAGT+TGG | - | chr7_3:52818959-52818978 | None:intergenic | 20.0% |
| !! | TAAACTAAATATTATGATCG+GGG | - | chr7_3:52819035-52819054 | None:intergenic | 20.0% |
| !!! | CTTTTTTAACAAATGTTCTT+TGG | + | chr7_3:52819098-52819117 | Msa1109310:intron | 20.0% |
| !!! | TTTTTGCTTATATTTGTTAC+CGG | - | chr7_3:52819461-52819480 | None:intergenic | 20.0% |
| !!! | TTTTAGGTTCATTCAATAAA+TGG | - | chr7_3:52819544-52819563 | None:intergenic | 20.0% |
| !! | ATCTATATTATTCAATTTGG+TGG | - | chr7_3:52820082-52820101 | None:intergenic | 20.0% |
| !! | CACATCTATATTATTCAATT+TGG | - | chr7_3:52820085-52820104 | None:intergenic | 20.0% |
| !! | CAAATTGAATAATATAGATG+TGG | + | chr7_3:52820083-52820102 | Msa1109310:intron | 20.0% |
| !! | CAATGAAATTAATAAGTGAT+TGG | - | chr7_3:52820475-52820494 | None:intergenic | 20.0% |
| !!! | TTATTTTTTGAGTATATGTG+TGG | - | chr7_3:52820529-52820548 | None:intergenic | 20.0% |
| !! | TTATTCTCAACACATAAATT+TGG | + | chr7_3:52821072-52821091 | Msa1109310:intron | 20.0% |
| !!! | TTATTTTTTTCAAATGGGTA+CGG | - | chr7_3:52821539-52821558 | None:intergenic | 20.0% |
| !! | GTAGTTTATTAGTAAAAACA+AGG | + | chr7_3:52821760-52821779 | Msa1109310:intron | 20.0% |
| !! | CTATATAAACATTTCAACTA+GGG | + | chr7_3:52821878-52821897 | Msa1109310:intron | 20.0% |
| !!! | ATTTTTGTTGATTGTAATGT+TGG | + | chr7_3:52822092-52822111 | Msa1109310:intron | 20.0% |
| !!! | TTTTTGTTGATTGTAATGTT+GGG | + | chr7_3:52822093-52822112 | Msa1109310:intron | 20.0% |
| !!! | TATGTGATTCTTTTTTAGTT+AGG | + | chr7_3:52822193-52822212 | Msa1109310:intron | 20.0% |
| !!! | CTTTTTTAGTTAGGAATATT+AGG | + | chr7_3:52822202-52822221 | Msa1109310:intron | 20.0% |
| !!! | AGAGACATTTTAAATAATCT+CGG | + | chr7_3:52822280-52822299 | Msa1109310:intron | 20.0% |
| !! | GAGATTATTCAAATCTAAAT+TGG | - | chr7_3:52822352-52822371 | None:intergenic | 20.0% |
| !!! | TTTTAGTAAATGGTTTTTCT+AGG | + | chr7_3:52822627-52822646 | Msa1109310:intron | 20.0% |
| !! | TTAAAGCTAAAACAAACATA+TGG | + | chr7_3:52822731-52822750 | Msa1109310:intron | 20.0% |
| !!! | TATTGAACATATTTTTAGTC+TGG | + | chr7_3:52822773-52822792 | Msa1109310:intron | 20.0% |
| !! | ATGATTCTTGTCTAATAAAT+AGG | + | chr7_3:52822883-52822902 | Msa1109310:intron | 20.0% |
| !! | AAATGCAAAAACAAAAATAG+TGG | - | chr7_3:52822951-52822970 | None:intergenic | 20.0% |
| !! | AAAATTTCCAACATTATCAA+TGG | - | chr7_3:52822975-52822994 | None:intergenic | 20.0% |
| !! | AGCCAAAATAAATAAAGTAT+GGG | - | chr7_3:52823053-52823072 | None:intergenic | 20.0% |
| !! | AAGCCAAAATAAATAAAGTA+TGG | - | chr7_3:52823054-52823073 | None:intergenic | 20.0% |
| !!! | AACATAAAATGTGTTGTTAT+TGG | + | chr7_3:52823185-52823204 | Msa1109310:intron | 20.0% |
| !! | TTTGACATTGTAAATAATCT+CGG | + | chr7_3:52823312-52823331 | Msa1109310:intron | 20.0% |
| !!! | TCTAATTGATTTAGATTAGA+CGG | + | chr7_3:52823397-52823416 | Msa1109310:intron | 20.0% |
| !! | AAGTCATCAAACATTATTAA+TGG | - | chr7_3:52823760-52823779 | None:intergenic | 20.0% |
| !! | ATTATAGACATTAATGATGT+AGG | + | chr7_3:52823909-52823928 | Msa1109310:intron | 20.0% |
| !!! | CACATCTACAAATAATTTTA+AGG | - | chr7_3:52823954-52823973 | None:intergenic | 20.0% |
| !! | CTTAAAATTATTTGTAGATG+TGG | + | chr7_3:52823952-52823971 | Msa1109310:intron | 20.0% |
| !! | AAATAATATAAACAACACAG+TGG | - | chr7_3:52824352-52824371 | None:intergenic | 20.0% |
| !!! | ATTGAATTTATTTGTTGTAC+AGG | + | chr7_3:52824407-52824426 | Msa1109310:intron | 20.0% |
| !! | AATTTATATAAACTACATGC+TGG | + | chr7_3:52824952-52824971 | Msa1109310:intron | 20.0% |
| !!! | TCTTGTGAATTTTGATTCAT+TGG | - | chr7_3:52817570-52817589 | None:intergenic | 25.0% |
| ! | ATGAATCAAAATTCACAAGA+TGG | + | chr7_3:52817570-52817589 | Msa1109310:CDS | 25.0% |
| ! | TGAATCAAAATTCACAAGAT+GGG | + | chr7_3:52817571-52817590 | Msa1109310:CDS | 25.0% |
| ! | AAGATGCTAAAGAAAAAGAA+GGG | + | chr7_3:52817604-52817623 | Msa1109310:CDS | 25.0% |
| ! | AAATGAAGTTCTTGAGAAAA+AGG | + | chr7_3:52817779-52817798 | Msa1109310:CDS | 25.0% |
| !!! | AACAATTTGTTGTTTTTACC+TGG | - | chr7_3:52818020-52818039 | None:intergenic | 25.0% |
| ! | AAGGAGTAAAAAAAATGTTG+GGG | - | chr7_3:52818153-52818172 | None:intergenic | 25.0% |
| ! | GAAGGAGTAAAAAAAATGTT+GGG | - | chr7_3:52818154-52818173 | None:intergenic | 25.0% |
| !! | TTGCAAAAGAATCACATTTT+GGG | - | chr7_3:52818447-52818466 | None:intergenic | 25.0% |
| !! | ATTGCAAAAGAATCACATTT+TGG | - | chr7_3:52818448-52818467 | None:intergenic | 25.0% |
| ! | CTACAAAAATCCATTCTTAT+AGG | + | chr7_3:52818629-52818648 | Msa1109310:intron | 25.0% |
| ! | TAACACGAAAACTAAAACAA+TGG | + | chr7_3:52818727-52818746 | Msa1109310:intron | 25.0% |
| ! | GAAAACTTATACATAAACGA+AGG | + | chr7_3:52818995-52819014 | Msa1109310:intron | 25.0% |
| ! | CCTTTAACAAATCATTAACA+TGG | - | chr7_3:52819151-52819170 | None:intergenic | 25.0% |
| !!! | CCATGTTAATGATTTGTTAA+AGG | + | chr7_3:52819148-52819167 | Msa1109310:intron | 25.0% |
| !! | TATATACCATTTTGCTTGTT+TGG | + | chr7_3:52819201-52819220 | Msa1109310:intron | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | + | chr7_3:52819496-52819515 | Msa1109310:intron | 25.0% |
| ! | TTGTTTATATTTATGACAGG+AGG | + | chr7_3:52819574-52819593 | Msa1109310:intron | 25.0% |
| ! | TGTTTATATTTATGACAGGA+GGG | + | chr7_3:52819575-52819594 | Msa1109310:intron | 25.0% |
| ! | TGATATTGACCATGTTTATA+GGG | - | chr7_3:52819629-52819648 | None:intergenic | 25.0% |
| !! | ATTCAATTTGGTGGTATAAA+TGG | - | chr7_3:52820073-52820092 | None:intergenic | 25.0% |
| !! | TCATTTGCTAATCATTACAA+TGG | - | chr7_3:52820386-52820405 | None:intergenic | 25.0% |
| !!! | TTGTAAAGTACCATTTTTGA+TGG | + | chr7_3:52820437-52820456 | Msa1109310:intron | 25.0% |
| ! | ATTATAGGTACCATCAAAAA+TGG | - | chr7_3:52820450-52820469 | None:intergenic | 25.0% |
| !! | AATAAGTGATTGGTCATTAT+AGG | - | chr7_3:52820465-52820484 | None:intergenic | 25.0% |
| ! | TAACTATTCTCAATTATCCA+AGG | + | chr7_3:52820546-52820565 | Msa1109310:intron | 25.0% |
| !!! | ATACGTTTTGATTTTATCAC+TGG | - | chr7_3:52820631-52820650 | None:intergenic | 25.0% |
| !!! | TTTAATTTTCCTCTTGCTTT+TGG | - | chr7_3:52820776-52820795 | None:intergenic | 25.0% |
| !!! | ATTTTGCTATTGTTGATTCA+TGG | - | chr7_3:52821042-52821061 | None:intergenic | 25.0% |
| !!! | TTTTTTGTAAAACCACATAG+TGG | - | chr7_3:52821109-52821128 | None:intergenic | 25.0% |
| ! | TTGTCTATGAAATAATAGAG+TGG | + | chr7_3:52821215-52821234 | Msa1109310:intron | 25.0% |
| ! | ACAAAAATAAAAGACAAGAC+CGG | - | chr7_3:52821370-52821389 | None:intergenic | 25.0% |
| !!! | GTCCCTAATTATTTTTTGAT+CGG | + | chr7_3:52821388-52821407 | Msa1109310:intron | 25.0% |
| ! | GACCGATCAAAAAATAATTA+GGG | - | chr7_3:52821393-52821412 | None:intergenic | 25.0% |
| ! | TGACCGATCAAAAAATAATT+AGG | - | chr7_3:52821394-52821413 | None:intergenic | 25.0% |
| !!! | TATTTTGACATCACATACTA+GGG | - | chr7_3:52821477-52821496 | None:intergenic | 25.0% |
| ! | CCTAGTTGAAATGTTTATAT+AGG | - | chr7_3:52821880-52821899 | None:intergenic | 25.0% |
| ! | CCTATATAAACATTTCAACT+AGG | + | chr7_3:52821877-52821896 | Msa1109310:intron | 25.0% |
| !!! | TGTAATGTTGGGTTTTATTT+TGG | + | chr7_3:52822104-52822123 | Msa1109310:intron | 25.0% |
| !!! | GTTTTTTGAGTACTTTGATT+TGG | + | chr7_3:52822819-52822838 | Msa1109310:intron | 25.0% |
| !!! | CACCCATACTTTATTTATTT+TGG | + | chr7_3:52823048-52823067 | Msa1109310:intron | 25.0% |
| !!! | TCTGTTTGATTTTTATTAGC+TGG | + | chr7_3:52823085-52823104 | Msa1109310:intron | 25.0% |
| !! | TATCTGTGTAATTTTGTATG+TGG | + | chr7_3:52823119-52823138 | Msa1109310:intron | 25.0% |
| !!! | TTTTTTCTAATGTTGTCTAC+TGG | + | chr7_3:52823238-52823257 | Msa1109310:intron | 25.0% |
| ! | ATACTAGCAAAATTCTCAAA+TGG | - | chr7_3:52824697-52824716 | None:intergenic | 25.0% |
| ! | TTTAGACAATATAACCAAGT+AGG | + | chr7_3:52824716-52824735 | Msa1109310:intron | 25.0% |
| ! | CACATCAAATTTGATGAAAT+CGG | - | chr7_3:52825179-52825198 | None:intergenic | 25.0% |
| ! | GATTTCATCAAATTTGATGT+GGG | + | chr7_3:52825178-52825197 | Msa1109310:CDS | 25.0% |
| ! | ATTTCATCAAATTTGATGTG+GGG | + | chr7_3:52825179-52825198 | Msa1109310:CDS | 25.0% |
| ! | AGTATCACAAACGATTTAAA+TGG | - | chr7_3:52825501-52825520 | None:intergenic | 25.0% |
| !!! | TGAGTTTAATTTTGTTTGGA+TGG | + | chr7_3:52825588-52825607 | Msa1109310:three_prime_UTR | 25.0% |
| ! | TATCAAAATCGTGATACAAT+TGG | - | chr7_3:52825644-52825663 | None:intergenic | 25.0% |
| TTCATTGGAGGAAACATATT+AGG | - | chr7_3:52817555-52817574 | None:intergenic | 30.0% | |
| !!! | TGTGAATTTTGATTCATTGG+AGG | - | chr7_3:52817567-52817586 | None:intergenic | 30.0% |
| ! | TTCTTTAGCATCTTCTCTTT+TGG | - | chr7_3:52817598-52817617 | None:intergenic | 30.0% |
| GAAGATGCTAAAGAAAAAGA+AGG | + | chr7_3:52817603-52817622 | Msa1109310:CDS | 30.0% | |
| AAGATGAAACAAGAAGAAGA+AGG | + | chr7_3:52817651-52817670 | Msa1109310:CDS | 30.0% | |
| !!! | AGCATCTTAGTCTTACTTTT+AGG | + | chr7_3:52818075-52818094 | Msa1109310:intron | 30.0% |
| ATTACCATGGTTGAAATTGA+GGG | - | chr7_3:52818115-52818134 | None:intergenic | 30.0% | |
| AATTACCATGGTTGAAATTG+AGG | - | chr7_3:52818116-52818135 | None:intergenic | 30.0% | |
| AGGAGTAAAAAAAATGTTGG+GGG | - | chr7_3:52818152-52818171 | None:intergenic | 30.0% | |
| GGAAGGAGTAAAAAAAATGT+TGG | - | chr7_3:52818155-52818174 | None:intergenic | 30.0% | |
| AAAGAAAAGTTCTATGTTGG+GGG | - | chr7_3:52818176-52818195 | None:intergenic | 30.0% | |
| CAAAGAAAAGTTCTATGTTG+GGG | - | chr7_3:52818177-52818196 | None:intergenic | 30.0% | |
| CCAAAGAAAAGTTCTATGTT+GGG | - | chr7_3:52818178-52818197 | None:intergenic | 30.0% | |
| ! | TGCAAAAGAATCACATTTTG+GGG | - | chr7_3:52818446-52818465 | None:intergenic | 30.0% |
| ! | CTTTTGTATTGTTGTATCGT+GGG | + | chr7_3:52818589-52818608 | Msa1109310:intron | 30.0% |
| CCAAAAAATTGTCACAGAAA+TGG | - | chr7_3:52818675-52818694 | None:intergenic | 30.0% | |
| !!! | CCATTTCTGTGACAATTTTT+TGG | + | chr7_3:52818672-52818691 | Msa1109310:intron | 30.0% |
| GAGTTAAATAGTACAATCCT+CGG | + | chr7_3:52818918-52818937 | Msa1109310:intron | 30.0% | |
| TTATACATAAACGAAGGAGT+TGG | + | chr7_3:52819001-52819020 | Msa1109310:intron | 30.0% | |
| TATACATAAACGAAGGAGTT+GGG | + | chr7_3:52819002-52819021 | Msa1109310:intron | 30.0% | |
| CATTCAATAAATGGTGTATG+TGG | - | chr7_3:52819535-52819554 | None:intergenic | 30.0% | |
| GTGATATTGACCATGTTTAT+AGG | - | chr7_3:52819630-52819649 | None:intergenic | 30.0% | |
| CCATTAATATAGACTTGACT+GGG | - | chr7_3:52819696-52819715 | None:intergenic | 30.0% | |
| ACCATTAATATAGACTTGAC+TGG | - | chr7_3:52819697-52819716 | None:intergenic | 30.0% | |
| TTAAAAAGCAAGCAAAACAC+CGG | - | chr7_3:52819855-52819874 | None:intergenic | 30.0% | |
| !!! | GCAAAAGGGTTTTGAATTAA+TGG | + | chr7_3:52819885-52819904 | Msa1109310:intron | 30.0% |
| TTGAATTAATGGTCCCATTT+AGG | + | chr7_3:52819896-52819915 | Msa1109310:intron | 30.0% | |
| AAATAACTACCGTATACATG+AGG | + | chr7_3:52820735-52820754 | Msa1109310:intron | 30.0% | |
| TATACTATCCTGCAATAAAG+GGG | - | chr7_3:52820836-52820855 | None:intergenic | 30.0% | |
| GTATACTATCCTGCAATAAA+GGG | - | chr7_3:52820837-52820856 | None:intergenic | 30.0% | |
| AGTATACTATCCTGCAATAA+AGG | - | chr7_3:52820838-52820857 | None:intergenic | 30.0% | |
| ! | ATTTGTGCACAACAATTTTG+TGG | + | chr7_3:52821016-52821035 | Msa1109310:intron | 30.0% |
| CAAAAATAAAAGACAAGACC+GGG | - | chr7_3:52821369-52821388 | None:intergenic | 30.0% | |
| !!! | GTATTTTGACATCACATACT+AGG | - | chr7_3:52821478-52821497 | None:intergenic | 30.0% |
| ! | GAATTTTGTATATGGGATAC+CGG | - | chr7_3:52821603-52821622 | None:intergenic | 30.0% |
| TGATATATGTACCATTCATC+TGG | - | chr7_3:52821689-52821708 | None:intergenic | 30.0% | |
| TATATCAAACCAAACTCAAC+AGG | + | chr7_3:52821702-52821721 | Msa1109310:intron | 30.0% | |
| AGTAACTCTTACAAAATCAG+AGG | + | chr7_3:52821790-52821809 | Msa1109310:intron | 30.0% | |
| !! | TACTATTACAGTGTCGATAA+TGG | - | chr7_3:52821843-52821862 | None:intergenic | 30.0% |
| TATCGACACTGTAATAGTAA+CGG | + | chr7_3:52821844-52821863 | Msa1109310:intron | 30.0% | |
| ! | AACATTTCAACTAGGGTTTT+AGG | + | chr7_3:52821885-52821904 | Msa1109310:intron | 30.0% |
| ! | AGAAGTGTAATTGTAGTGTA+GGG | - | chr7_3:52822029-52822048 | None:intergenic | 30.0% |
| ! | AAGAAGTGTAATTGTAGTGT+AGG | - | chr7_3:52822030-52822049 | None:intergenic | 30.0% |
| TTAGTTAGGAATATTAGGAG+AGG | + | chr7_3:52822207-52822226 | Msa1109310:intron | 30.0% | |
| GATAGAACTGTTCTGATAAA+TGG | + | chr7_3:52822315-52822334 | Msa1109310:intron | 30.0% | |
| TAGTACACAGTTTACGTTTA+GGG | + | chr7_3:52822436-52822455 | Msa1109310:intron | 30.0% | |
| TTTCTAGGTAGTAAACAAAC+AGG | + | chr7_3:52822642-52822661 | Msa1109310:intron | 30.0% | |
| !!! | ATATTTTTAGTCTGGTCTGA+AGG | + | chr7_3:52822781-52822800 | Msa1109310:intron | 30.0% |
| ! | AGGTTTAAAATCAGTAGACA+CGG | - | chr7_3:52823002-52823021 | None:intergenic | 30.0% |
| !!! | TTTATTTTGGCTTAGCTTAC+TGG | + | chr7_3:52823061-52823080 | Msa1109310:intron | 30.0% |
| ! | TACTGGTAATGTATTTGTCA+AGG | + | chr7_3:52823255-52823274 | Msa1109310:intron | 30.0% |
| ! | ACTGGTAATGTATTTGTCAA+GGG | + | chr7_3:52823256-52823275 | Msa1109310:intron | 30.0% |
| TACAGTTAAAACAGAGAATC+TGG | - | chr7_3:52823284-52823303 | None:intergenic | 30.0% | |
| ACATAACACATTCTCCAAAT+TGG | + | chr7_3:52823360-52823379 | Msa1109310:intron | 30.0% | |
| GAGTTTATTTCAAGCCAATT+TGG | - | chr7_3:52823377-52823396 | None:intergenic | 30.0% | |
| !! | AGATGTTTGCTTTTGTCTTA+AGG | + | chr7_3:52823569-52823588 | Msa1109310:intron | 30.0% |
| !! | TAGTTCTAAGCCTGAAAAAT+TGG | + | chr7_3:52823806-52823825 | Msa1109310:intron | 30.0% |
| AATTATTTGTAGATGTGGCT+AGG | + | chr7_3:52823957-52823976 | Msa1109310:intron | 30.0% | |
| AAACCTAGATTGAGAAAGAA+AGG | - | chr7_3:52824056-52824075 | None:intergenic | 30.0% | |
| ! | TAGTTTTTCTCGTGTATTTC+AGG | + | chr7_3:52824230-52824249 | Msa1109310:intron | 30.0% |
| GTTTGAAGAAACATTTGAAG+CGG | + | chr7_3:52824259-52824278 | Msa1109310:CDS | 30.0% | |
| ! | TTTAGAATCACAAACCTACT+TGG | - | chr7_3:52824733-52824752 | None:intergenic | 30.0% |
| CGATTTCATCAAATTTGATG+TGG | + | chr7_3:52825177-52825196 | Msa1109310:CDS | 30.0% | |
| !! | GCTGTGAGTTTAATTTTGTT+TGG | + | chr7_3:52825584-52825603 | Msa1109310:three_prime_UTR | 30.0% |
| !! | TTAATTTTGTTTGGATGGCA+TGG | + | chr7_3:52825593-52825612 | Msa1109310:three_prime_UTR | 30.0% |
| GTAGTAACTTTCTCAGTTCT+TGG | - | chr7_3:52817744-52817763 | None:intergenic | 35.0% | |
| GTTACTACTCAAGATGAAAG+TGG | + | chr7_3:52817756-52817775 | Msa1109310:CDS | 35.0% | |
| AGTTCTTGAGAAAAAGGAAG+AGG | + | chr7_3:52817785-52817804 | Msa1109310:CDS | 35.0% | |
| !! | AAGGAAGAGGTTGATAACAA+TGG | + | chr7_3:52817798-52817817 | Msa1109310:CDS | 35.0% |
| ! | ATAACAATGGTGGAGAGAAA+GGG | + | chr7_3:52817811-52817830 | Msa1109310:CDS | 35.0% |
| ! | GACATTGTTTCTCATTTACC+AGG | + | chr7_3:52817999-52818018 | Msa1109310:CDS | 35.0% |
| TTACCATGGTTGAAATTGAG+GGG | - | chr7_3:52818114-52818133 | None:intergenic | 35.0% | |
| ! | CCCAACATAGAACTTTTCTT+TGG | + | chr7_3:52818175-52818194 | Msa1109310:intron | 35.0% |
| GCCAAAGAAAAGTTCTATGT+TGG | - | chr7_3:52818179-52818198 | None:intergenic | 35.0% | |
| CCACGATACAACAATACAAA+AGG | - | chr7_3:52818591-52818610 | None:intergenic | 35.0% | |
| ! | CCTTTTGTATTGTTGTATCG+TGG | + | chr7_3:52818588-52818607 | Msa1109310:intron | 35.0% |
| AACACATCTCCCTATAAGAA+TGG | - | chr7_3:52818642-52818661 | None:intergenic | 35.0% | |
| ACTATCCAGGTACATTCTTT+CGG | - | chr7_3:52818857-52818876 | None:intergenic | 35.0% | |
| GACATAGCTCTTATCATAGT+TGG | + | chr7_3:52819174-52819193 | Msa1109310:intron | 35.0% | |
| CAATGTCCAAACAAGCAAAA+TGG | - | chr7_3:52819210-52819229 | None:intergenic | 35.0% | |
| ! | CATTTTGCTTGTTTGGACAT+TGG | + | chr7_3:52819208-52819227 | Msa1109310:intron | 35.0% |
| TTTCCAAGATATACACCTTC+CGG | + | chr7_3:52819439-52819458 | Msa1109310:intron | 35.0% | |
| ! | TGCTTATATTTGTTACCGGA+AGG | - | chr7_3:52819457-52819476 | None:intergenic | 35.0% |
| GATCACATACCCTATAAACA+TGG | + | chr7_3:52819617-52819636 | Msa1109310:intron | 35.0% | |
| !! | TTTAGTTTGTACAGATGTCG+TGG | - | chr7_3:52819652-52819671 | None:intergenic | 35.0% |
| CCCAGTCAAGTCTATATTAA+TGG | + | chr7_3:52819693-52819712 | Msa1109310:intron | 35.0% | |
| ! | ATAATCGGTTTCACATTGAG+TGG | + | chr7_3:52819798-52819817 | Msa1109310:intron | 35.0% |
| !! | CGGTAGTTATTTTCACCTAT+GGG | - | chr7_3:52820727-52820746 | None:intergenic | 35.0% |
| !! | ACGGTAGTTATTTTCACCTA+TGG | - | chr7_3:52820728-52820747 | None:intergenic | 35.0% |
| !! | GACTTTTGATTGTTTTGTGC+AGG | - | chr7_3:52820799-52820818 | None:intergenic | 35.0% |
| ATTGCAGGATAGTATACTAC+TGG | + | chr7_3:52820840-52820859 | Msa1109310:intron | 35.0% | |
| ACTACTGGATAGTATACTAC+TGG | + | chr7_3:52820855-52820874 | Msa1109310:intron | 35.0% | |
| CTACTGGATAGTATACTACT+GGG | + | chr7_3:52820856-52820875 | Msa1109310:intron | 35.0% | |
| !!! | TTTTTTTTGAGGTCCATCCT+TGG | + | chr7_3:52820888-52820907 | Msa1109310:intron | 35.0% |
| !!! | TTTTTTTGAGGTCCATCCTT+GGG | + | chr7_3:52820889-52820908 | Msa1109310:intron | 35.0% |
| !! | GTATTTGTTATGCCACTATG+TGG | + | chr7_3:52821094-52821113 | Msa1109310:intron | 35.0% |
| ! | TCATGTCTCAAATTAGTCTG+AGG | - | chr7_3:52821299-52821318 | None:intergenic | 35.0% |
| ! | TCAGACTAATTTGAGACATG+AGG | + | chr7_3:52821298-52821317 | Msa1109310:intron | 35.0% |
| ! | CAGACTAATTTGAGACATGA+GGG | + | chr7_3:52821299-52821318 | Msa1109310:intron | 35.0% |
| TTAAAACAAGGATCGAGTTC+GGG | - | chr7_3:52821340-52821359 | None:intergenic | 35.0% | |
| GTTAAAACAAGGATCGAGTT+CGG | - | chr7_3:52821341-52821360 | None:intergenic | 35.0% | |
| !!! | GAACTCGATCCTTGTTTTAA+CGG | + | chr7_3:52821340-52821359 | Msa1109310:intron | 35.0% |
| !!! | ATTTTTTGATCGGTCAAACC+CGG | + | chr7_3:52821398-52821417 | Msa1109310:intron | 35.0% |
| ! | TAGGTACCTTTGAGTTTAGT+TGG | + | chr7_3:52821574-52821593 | Msa1109310:intron | 35.0% |
| ! | AGGTACCTTTGAGTTTAGTT+GGG | + | chr7_3:52821575-52821594 | Msa1109310:intron | 35.0% |
| ! | ACATTGATTGACCAGATGAA+TGG | + | chr7_3:52821675-52821694 | Msa1109310:intron | 35.0% |
| ACAAAGATACCTGTTGAGTT+TGG | - | chr7_3:52821714-52821733 | None:intergenic | 35.0% | |
| !! | GATAATGGAGTGCAAGTTAT+GGG | - | chr7_3:52821828-52821847 | None:intergenic | 35.0% |
| GTGTTGTAAACAGAGAAGAA+CGG | - | chr7_3:52821985-52822004 | None:intergenic | 35.0% | |
| CTGTTTACAACACATCAACA+TGG | + | chr7_3:52821992-52822011 | Msa1109310:intron | 35.0% | |
| CTTGACAAAAACATTGTCAG+TGG | - | chr7_3:52822262-52822281 | None:intergenic | 35.0% | |
| CTAAACGTAAACTGTGTACT+AGG | - | chr7_3:52822437-52822456 | None:intergenic | 35.0% | |
| CTAGTACACAGTTTACGTTT+AGG | + | chr7_3:52822435-52822454 | Msa1109310:intron | 35.0% | |
| !! | GCATTTGCCATTGATAATGT+TGG | + | chr7_3:52822965-52822984 | Msa1109310:intron | 35.0% |
| ! | TGATTTTAAACCTGCCAACT+TGG | + | chr7_3:52823009-52823028 | Msa1109310:intron | 35.0% |
| ! | CTGGTAATGTATTTGTCAAG+GGG | + | chr7_3:52823257-52823276 | Msa1109310:intron | 35.0% |
| TAAACTCTATACTCAGCCAA+TGG | - | chr7_3:52823477-52823496 | None:intergenic | 35.0% | |
| ! | TGCTTTTGTCTTAAGGTTTC+AGG | + | chr7_3:52823576-52823595 | Msa1109310:intron | 35.0% |
| ! | GCTTTTGTCTTAAGGTTTCA+GGG | + | chr7_3:52823577-52823596 | Msa1109310:intron | 35.0% |
| AGTACTAGTACTAGTAGACA+TGG | - | chr7_3:52823787-52823806 | None:intergenic | 35.0% | |
| ! | GCTTAGAACTCCAATTTTTC+AGG | - | chr7_3:52823819-52823838 | None:intergenic | 35.0% |
| !! | GAGTTCTAAGCCTGAAAAAT+TGG | + | chr7_3:52823828-52823847 | Msa1109310:intron | 35.0% |
| AATGAGTGAGAACTTGTATG+CGG | - | chr7_3:52823858-52823877 | None:intergenic | 35.0% | |
| TAGCTGTTCACATGATTCAT+CGG | + | chr7_3:52823988-52824007 | Msa1109310:intron | 35.0% | |
| CTAGATTGAGAAAGAAAGGT+AGG | - | chr7_3:52824052-52824071 | None:intergenic | 35.0% | |
| CTACCTTTCTTTCTCAATCT+AGG | + | chr7_3:52824050-52824069 | Msa1109310:intron | 35.0% | |
| TTATCAAGCATCCAATGCTT+TGG | - | chr7_3:52824294-52824313 | None:intergenic | 35.0% | |
| TCAGAATGATGTCCATACAA+AGG | - | chr7_3:52824328-52824347 | None:intergenic | 35.0% | |
| TTCCTCAAGATAAGGATCAA+CGG | - | chr7_3:52824477-52824496 | None:intergenic | 35.0% | |
| TTAGTCTGTTCCTCAAGATA+AGG | - | chr7_3:52824485-52824504 | None:intergenic | 35.0% | |
| !! | TTCTAGTTGATGGCAAAGTT+AGG | + | chr7_3:52824556-52824575 | Msa1109310:CDS | 35.0% |
| !!! | ACATATCCTGCTGGTTTTAT+GGG | + | chr7_3:52824588-52824607 | Msa1109310:CDS | 35.0% |
| TTAACAATGCCGTGCAATTT+AGG | - | chr7_3:52824627-52824646 | None:intergenic | 35.0% | |
| !!! | CGGAAATTTTCATTGGTCTT+GGG | - | chr7_3:52824815-52824834 | None:intergenic | 35.0% |
| !! | ACGGAAATTTTCATTGGTCT+TGG | - | chr7_3:52824816-52824835 | None:intergenic | 35.0% |
| ! | GAGAAGACGGAAATTTTCAT+TGG | - | chr7_3:52824822-52824841 | None:intergenic | 35.0% |
| CTTTAGTGTCATAGAGAAGA+CGG | - | chr7_3:52824835-52824854 | None:intergenic | 35.0% | |
| !! | TGTGTCATTGGCCTTAATAA+GGG | - | chr7_3:52825125-52825144 | None:intergenic | 35.0% |
| !! | TTGTGTCATTGGCCTTAATA+AGG | - | chr7_3:52825126-52825145 | None:intergenic | 35.0% |
| ! | GTCTAGTTTGATTGTGTCAT+TGG | - | chr7_3:52825137-52825156 | None:intergenic | 35.0% |
| TGACACAATCAAACTAGACT+TGG | + | chr7_3:52825138-52825157 | Msa1109310:CDS | 35.0% | |
| ! | AAGAACAGAGAAAAGCACAA+AGG | + | chr7_3:52825253-52825272 | Msa1109310:CDS | 35.0% |
| AATTTGATACCTCTGCCTTT+GGG | - | chr7_3:52825385-52825404 | None:intergenic | 35.0% | |
| TATCAAATTGACCGTCATTG+AGG | + | chr7_3:52825396-52825415 | Msa1109310:CDS | 35.0% | |
| ! | TCGTTTGTGATACTGTTTTG+CGG | + | chr7_3:52825507-52825526 | Msa1109310:three_prime_UTR | 35.0% |
| ! | CAACGTCACAATTTTGAACT+AGG | + | chr7_3:52825558-52825577 | Msa1109310:three_prime_UTR | 35.0% |
| GAAGAAGGTAAAGACAGTTC+AGG | + | chr7_3:52817666-52817685 | Msa1109310:CDS | 40.0% | |
| TGGACTTGAAGGAGTTATGA+AGG | - | chr7_3:52817724-52817743 | None:intergenic | 40.0% | |
| TTCTCAGTTCTTGGACTTGA+AGG | - | chr7_3:52817735-52817754 | None:intergenic | 40.0% | |
| !! | GAAGAGGTTGATAACAATGG+TGG | + | chr7_3:52817801-52817820 | Msa1109310:CDS | 40.0% |
| ! | GATAACAATGGTGGAGAGAA+AGG | + | chr7_3:52817810-52817829 | Msa1109310:CDS | 40.0% |
| GAAAGGGATCATCAGCAATT+TGG | + | chr7_3:52817827-52817846 | Msa1109310:CDS | 40.0% | |
| GAGATTGAAGACAGAGAATG+AGG | + | chr7_3:52817935-52817954 | Msa1109310:CDS | 40.0% | |
| AAGACAGAGAATGAGGCTAA+TGG | + | chr7_3:52817942-52817961 | Msa1109310:CDS | 40.0% | |
| AAACCCCTCAATTTCAACCA+TGG | + | chr7_3:52818108-52818127 | Msa1109310:intron | 40.0% | |
| AAAAGTTCTATGTTGGGGGA+AGG | - | chr7_3:52818172-52818191 | None:intergenic | 40.0% | |
| ! | TTGATTGACACTGCCTTGTT+TGG | + | chr7_3:52818313-52818332 | Msa1109310:intron | 40.0% |
| GCAATTTCTTTCCGATCACA+AGG | + | chr7_3:52818412-52818431 | Msa1109310:intron | 40.0% | |
| !!! | AATCACATTTTGGGGCAATG+AGG | - | chr7_3:52818438-52818457 | None:intergenic | 40.0% |
| ATTGTCCGAAAGAATGTACC+TGG | + | chr7_3:52818849-52818868 | Msa1109310:intron | 40.0% | |
| CTTGACATGTGATACTATCC+AGG | - | chr7_3:52818870-52818889 | None:intergenic | 40.0% | |
| ! | TTACCGGAAGGTGTATATCT+TGG | - | chr7_3:52819445-52819464 | None:intergenic | 40.0% |
| TGGAAGGAAGCTTCGATAAT+CGG | + | chr7_3:52819783-52819802 | Msa1109310:intron | 40.0% | |
| TAATGGTCCCATTTAGGCTT+TGG | + | chr7_3:52819902-52819921 | Msa1109310:intron | 40.0% | |
| AATGGTCCCATTTAGGCTTT+GGG | + | chr7_3:52819903-52819922 | Msa1109310:intron | 40.0% | |
| CAAACTCCCAAAGCCTAAAT+GGG | - | chr7_3:52819912-52819931 | None:intergenic | 40.0% | |
| TACAACGTGCCGTATATATG+CGG | + | chr7_3:52820697-52820716 | Msa1109310:intron | 40.0% | |
| ATGGGTGTACCGCATATATA+CGG | - | chr7_3:52820709-52820728 | None:intergenic | 40.0% | |
| TATATATGCGGTACACCCAT+AGG | + | chr7_3:52820709-52820728 | Msa1109310:intron | 40.0% | |
| !!! | TCTTGCTTTTGGTGTTAGGT+GGG | - | chr7_3:52820765-52820784 | None:intergenic | 40.0% |
| !!! | TTCCTCTTGCTTTTGGTGTT+AGG | - | chr7_3:52820769-52820788 | None:intergenic | 40.0% |
| !!! | TTTTTTGAGGTCCATCCTTG+GGG | + | chr7_3:52820890-52820909 | Msa1109310:intron | 40.0% |
| ! | AAAGTCTTGTCTCGATGACA+GGG | - | chr7_3:52820959-52820978 | None:intergenic | 40.0% |
| ! | TAAAGTCTTGTCTCGATGAC+AGG | - | chr7_3:52820960-52820979 | None:intergenic | 40.0% |
| GTTGTATAACACTCTCACTG+AGG | - | chr7_3:52821242-52821261 | None:intergenic | 40.0% | |
| ! | CTTTGAGTTTAGTTGGGTAC+CGG | + | chr7_3:52821581-52821600 | Msa1109310:intron | 40.0% |
| ACTAGAAAGAAAACGAAGCG+TGG | + | chr7_3:52821738-52821757 | Msa1109310:intron | 40.0% | |
| !!! | CAAGTTATGGGTTTTGAGTC+AGG | - | chr7_3:52821816-52821835 | None:intergenic | 40.0% |
| !! | CGATAATGGAGTGCAAGTTA+TGG | - | chr7_3:52821829-52821848 | None:intergenic | 40.0% |
| TCACACACACAAGAACCAAA+AGG | + | chr7_3:52821938-52821957 | Msa1109310:intron | 40.0% | |
| CTGTGTACTAGGATTCTCTA+CGG | - | chr7_3:52822426-52822445 | None:intergenic | 40.0% | |
| CTTGTACAAGATGTCCAAGT+TGG | - | chr7_3:52823026-52823045 | None:intergenic | 40.0% | |
| CAACTTGGACATCTTGTACA+AGG | + | chr7_3:52823024-52823043 | Msa1109310:intron | 40.0% | |
| CAGCAAGCTGTAAAAGTTTC+TGG | + | chr7_3:52823212-52823231 | Msa1109310:intron | 40.0% | |
| TGCCTAAAATCTCAGTCCAT+TGG | + | chr7_3:52823458-52823477 | Msa1109310:intron | 40.0% | |
| !!! | AGCCAATGGACTGAGATTTT+AGG | - | chr7_3:52823463-52823482 | None:intergenic | 40.0% |
| TGTCTTAAGGTTTCAGGGTT+AGG | + | chr7_3:52823582-52823601 | Msa1109310:intron | 40.0% | |
| ! | ATGCGGATGTCCAATTTTTC+AGG | - | chr7_3:52823841-52823860 | None:intergenic | 40.0% |
| CATTGGATGCTTGATAAGCT+TGG | + | chr7_3:52824297-52824316 | Msa1109310:CDS | 40.0% | |
| ATCTGGACCACACAAATCAA+GGG | + | chr7_3:52824443-52824462 | Msa1109310:CDS | 40.0% | |
| CTTTGCCATCAACTAGAACA+TGG | - | chr7_3:52824554-52824573 | None:intergenic | 40.0% | |
| !!! | GACATATCCTGCTGGTTTTA+TGG | + | chr7_3:52824587-52824606 | Msa1109310:CDS | 40.0% |
| GGCATTAGACCTAAATTGCA+CGG | + | chr7_3:52824615-52824634 | Msa1109310:intron | 40.0% | |
| CGTCTTCTCTATGACACTAA+AGG | + | chr7_3:52824833-52824852 | Msa1109310:CDS | 40.0% | |
| TGTAAGGGATGATGAAGCAA+AGG | + | chr7_3:52824874-52824893 | Msa1109310:CDS | 40.0% | |
| AAGCTTAAACTGCAACAGGT+TGG | - | chr7_3:52825017-52825036 | None:intergenic | 40.0% | |
| TGCAAAGCTTAAACTGCAAC+AGG | - | chr7_3:52825021-52825040 | None:intergenic | 40.0% | |
| GTTGCAGTTTAAGCTTTGCA+AGG | + | chr7_3:52825021-52825040 | Msa1109310:intron | 40.0% | |
| AAGGTACGATCTGTTCAGTT+TGG | + | chr7_3:52825040-52825059 | Msa1109310:CDS | 40.0% | |
| AGGTACGATCTGTTCAGTTT+GGG | + | chr7_3:52825041-52825060 | Msa1109310:CDS | 40.0% | |
| CCATCATAGGTGTTCAGATA+CGG | - | chr7_3:52825079-52825098 | None:intergenic | 40.0% | |
| CGTATCTGAACACCTATGAT+GGG | + | chr7_3:52825077-52825096 | Msa1109310:CDS | 40.0% | |
| TAATAAGGGGATCAGGATAG+CGG | - | chr7_3:52825111-52825130 | None:intergenic | 40.0% | |
| CTATCCTGATCCCCTTATTA+AGG | + | chr7_3:52825111-52825130 | Msa1109310:CDS | 40.0% | |
| !! | GTGTCATTGGCCTTAATAAG+GGG | - | chr7_3:52825124-52825143 | None:intergenic | 40.0% |
| TGATGTGGGGAATGTTGTTA+TGG | + | chr7_3:52825192-52825211 | Msa1109310:CDS | 40.0% | |
| AATGTTGTTATGGTGACTGG+AGG | + | chr7_3:52825202-52825221 | Msa1109310:CDS | 40.0% | |
| !!! | TTTTGAGACCATTCATGTCC+AGG | + | chr7_3:52825279-52825298 | Msa1109310:CDS | 40.0% |
| TGGTGAAGACATTACCCAAT+CGG | - | chr7_3:52825330-52825349 | None:intergenic | 40.0% | |
| TTGGGTAATGTCTTCACCAT+TGG | + | chr7_3:52825331-52825350 | Msa1109310:CDS | 40.0% | |
| AATGTCTTCACCATTGGCAA+AGG | + | chr7_3:52825337-52825356 | Msa1109310:CDS | 40.0% | |
| CAATTTGATACCTCTGCCTT+TGG | - | chr7_3:52825386-52825405 | None:intergenic | 40.0% | |
| GAAGGTAAAGACAGTTCAGG+TGG | + | chr7_3:52817669-52817688 | Msa1109310:CDS | 45.0% | |
| ACGTGAGTGTGAAGAAGTTG+TGG | + | chr7_3:52817869-52817888 | Msa1109310:CDS | 45.0% | |
| TGAGTGTGAAGAAGTTGTGG+TGG | + | chr7_3:52817872-52817891 | Msa1109310:CDS | 45.0% | |
| ! | TGAAGAAGTTGTGGTGGAGA+AGG | + | chr7_3:52817878-52817897 | Msa1109310:CDS | 45.0% |
| ACAGAGAATGAGGCTAATGG+TGG | + | chr7_3:52817945-52817964 | Msa1109310:CDS | 45.0% | |
| TGCATCATCTGGTCCAAACA+AGG | - | chr7_3:52818329-52818348 | None:intergenic | 45.0% | |
| ATAGTTGCCTCATCTGCTGT+TGG | - | chr7_3:52818355-52818374 | None:intergenic | 45.0% | |
| !! | GGAAAAGAGAAGAGTATCCG+AGG | - | chr7_3:52818938-52818957 | None:intergenic | 45.0% |
| CTTGACTGGGTTCAACAGAT+TGG | - | chr7_3:52819683-52819702 | None:intergenic | 45.0% | |
| CCAAACTCCCAAAGCCTAAA+TGG | - | chr7_3:52819913-52819932 | None:intergenic | 45.0% | |
| !! | CCATTTAGGCTTTGGGAGTT+TGG | + | chr7_3:52819910-52819929 | Msa1109310:intron | 45.0% |
| !! | TTAGGCTTTGGGAGTTTGGA+AGG | + | chr7_3:52819914-52819933 | Msa1109310:intron | 45.0% |
| TTATCCAAGGATCATCGAGC+AGG | + | chr7_3:52820559-52820578 | Msa1109310:intron | 45.0% | |
| TATCCAAGGATCATCGAGCA+GGG | + | chr7_3:52820560-52820579 | Msa1109310:intron | 45.0% | |
| GTGGGGATTCCTCATGTATA+CGG | - | chr7_3:52820747-52820766 | None:intergenic | 45.0% | |
| !!! | CTTGCTTTTGGTGTTAGGTG+GGG | - | chr7_3:52820764-52820783 | None:intergenic | 45.0% |
| !!! | CTCTTGCTTTTGGTGTTAGG+TGG | - | chr7_3:52820766-52820785 | None:intergenic | 45.0% |
| CACCTAACACCAAAAGCAAG+AGG | + | chr7_3:52820764-52820783 | Msa1109310:intron | 45.0% | |
| TGTTTGCACCCCTTTATTGC+AGG | + | chr7_3:52820825-52820844 | Msa1109310:intron | 45.0% | |
| !!! | TTTTTGAGGTCCATCCTTGG+GGG | + | chr7_3:52820891-52820910 | Msa1109310:intron | 45.0% |
| !!! | TCCTTGTTTTAACGGTGTCC+CGG | + | chr7_3:52821348-52821367 | Msa1109310:intron | 45.0% |
| CGGTACCCAACTAAACTCAA+AGG | - | chr7_3:52821583-52821602 | None:intergenic | 45.0% | |
| ! | CGTTTAGGGTGCGTTTGTTT+AGG | + | chr7_3:52822450-52822469 | Msa1109310:intron | 45.0% |
| ! | TACAAGATGTCCAAGTTGGC+AGG | - | chr7_3:52823022-52823041 | None:intergenic | 45.0% |
| TCTCGTGTATTTCAGGCAAG+AGG | + | chr7_3:52824237-52824256 | Msa1109310:intron | 45.0% | |
| TGGATGCTTGATAAGCTTGG+TGG | + | chr7_3:52824300-52824319 | Msa1109310:CDS | 45.0% | |
| GATTTGTGTGGTCCAGATGA+CGG | - | chr7_3:52824441-52824460 | None:intergenic | 45.0% | |
| CATCTGGACCACACAAATCA+AGG | + | chr7_3:52824442-52824461 | Msa1109310:CDS | 45.0% | |
| TCAAGATAAGGATCAACGGC+AGG | - | chr7_3:52824473-52824492 | None:intergenic | 45.0% | |
| TGCCGTTGATCCTTATCTTG+AGG | + | chr7_3:52824472-52824491 | Msa1109310:CDS | 45.0% | |
| ACAGACAAGACATATCCTGC+TGG | + | chr7_3:52824579-52824598 | Msa1109310:CDS | 45.0% | |
| !!! | TCCTGCTGGTTTTATGGGTA+TGG | + | chr7_3:52824593-52824612 | Msa1109310:intron | 45.0% |
| !!! | CCTGCTGGTTTTATGGGTAT+GGG | + | chr7_3:52824594-52824613 | Msa1109310:intron | 45.0% |
| ATTCCGTCTCCACTCTGTAA+GGG | + | chr7_3:52824859-52824878 | Msa1109310:CDS | 45.0% | |
| CTTCATCATCCCTTACAGAG+TGG | - | chr7_3:52824871-52824890 | None:intergenic | 45.0% | |
| ! | AAACTGCAACAGGTTGGAGA+GGG | - | chr7_3:52825011-52825030 | None:intergenic | 45.0% |
| ! | TAAACTGCAACAGGTTGGAG+AGG | - | chr7_3:52825012-52825031 | None:intergenic | 45.0% |
| TCTGTTCAGTTTGGGCAGAA+AGG | + | chr7_3:52825049-52825068 | Msa1109310:CDS | 45.0% | |
| CTGTTCAGTTTGGGCAGAAA+GGG | + | chr7_3:52825050-52825069 | Msa1109310:CDS | 45.0% | |
| CCGTATCTGAACACCTATGA+TGG | + | chr7_3:52825076-52825095 | Msa1109310:CDS | 45.0% | |
| !! | TTGGCCTTAATAAGGGGATC+AGG | - | chr7_3:52825118-52825137 | None:intergenic | 45.0% |
| GGGAATGTTGTTATGGTGAC+TGG | + | chr7_3:52825199-52825218 | Msa1109310:CDS | 45.0% | |
| TTGTTATGGTGACTGGAGGA+AGG | + | chr7_3:52825206-52825225 | Msa1109310:CDS | 45.0% | |
| AGTAGCATCCTGGACATGAA+TGG | - | chr7_3:52825290-52825309 | None:intergenic | 45.0% | |
| ATTCATGTCCAGGATGCTAC+TGG | + | chr7_3:52825289-52825308 | Msa1109310:CDS | 45.0% | |
| TCATGAGTTTGCAACCCGAT+TGG | + | chr7_3:52825312-52825331 | Msa1109310:CDS | 45.0% | |
| CATGAGTTTGCAACCCGATT+GGG | + | chr7_3:52825313-52825332 | Msa1109310:CDS | 45.0% | |
| GGTGAAGACATTACCCAATC+GGG | - | chr7_3:52825329-52825348 | None:intergenic | 45.0% | |
| AGGTTTCGAACCTTTGCCAA+TGG | - | chr7_3:52825350-52825369 | None:intergenic | 45.0% | |
| TTGGCAAAGGTTCGAAACCT+TGG | + | chr7_3:52825350-52825369 | Msa1109310:CDS | 45.0% | |
| TGGCAAAGGTTCGAAACCTT+GGG | + | chr7_3:52825351-52825370 | Msa1109310:CDS | 45.0% | |
| CAAATTGACCGTCATTGAGG+AGG | + | chr7_3:52825399-52825418 | Msa1109310:CDS | 45.0% | |
| TATGATTATCGTGCGCTGCT+TGG | + | chr7_3:52825668-52825687 | Msa1109310:three_prime_UTR | 45.0% | |
| ATGATTATCGTGCGCTGCTT+GGG | + | chr7_3:52825669-52825688 | Msa1109310:three_prime_UTR | 45.0% | |
| ATTGCGAGTTTCAACGCTTC+AGG | + | chr7_3:52825698-52825717 | Msa1109310:three_prime_UTR | 45.0% | |
| !!! | AAAAAAAAAAAAAAGATTTT+GGG | - | chr7_3:52822555-52822574 | None:intergenic | 5.0% |
| !!! | AAAAAAAAAAAAAAAGATTT+TGG | - | chr7_3:52822556-52822575 | None:intergenic | 5.0% |
| GGTAAAGACAGTTCAGGTGG+TGG | + | chr7_3:52817672-52817691 | Msa1109310:CDS | 50.0% | |
| ! | AAAGACAGTTCAGGTGGTGG+AGG | + | chr7_3:52817675-52817694 | Msa1109310:CDS | 50.0% |
| AATGAGGCTAATGGTGGCAC+TGG | + | chr7_3:52817951-52817970 | Msa1109310:CDS | 50.0% | |
| GACTGGGTTCAACAGATTGG+TGG | - | chr7_3:52819680-52819699 | None:intergenic | 50.0% | |
| CCTCTTGCAGTGAGATGACT+AGG | - | chr7_3:52819763-52819782 | None:intergenic | 50.0% | |
| CCTAGTCATCTCACTGCAAG+AGG | + | chr7_3:52819760-52819779 | Msa1109310:intron | 50.0% | |
| AGTCATCTCACTGCAAGAGG+TGG | + | chr7_3:52819763-52819782 | Msa1109310:intron | 50.0% | |
| ATCTCACTGCAAGAGGTGGA+AGG | + | chr7_3:52819767-52819786 | Msa1109310:intron | 50.0% | |
| ! | TGAGTGGCCTTACTCAACCA+CGG | + | chr7_3:52819814-52819833 | Msa1109310:intron | 50.0% |
| CAAAACACCGGTGCCTGATT+TGG | - | chr7_3:52819843-52819862 | None:intergenic | 50.0% | |
| !! | GCTTTGGGAGTTTGGAAGGA+GGG | + | chr7_3:52819918-52819937 | Msa1109310:intron | 50.0% |
| ! | CTTTGGGAGTTTGGAAGGAG+GGG | + | chr7_3:52819919-52819938 | Msa1109310:intron | 50.0% |
| TTTGGAAGGAGGGGATGGAA+GGG | + | chr7_3:52819928-52819947 | Msa1109310:intron | 50.0% | |
| !! | TCGGCTCTGGGAATGAAAAG+AGG | + | chr7_3:52820605-52820624 | Msa1109310:intron | 50.0% |
| ACCGGGACACCGTTAAAACA+AGG | - | chr7_3:52821352-52821371 | None:intergenic | 50.0% | |
| AAACCCGGTCCATTGCATTC+TGG | + | chr7_3:52821413-52821432 | Msa1109310:intron | 50.0% | |
| CAACCAGAATGCAATGGACC+GGG | - | chr7_3:52821419-52821438 | None:intergenic | 50.0% | |
| CCAACCAGAATGCAATGGAC+CGG | - | chr7_3:52821420-52821439 | None:intergenic | 50.0% | |
| ! | CGGTCCATTGCATTCTGGTT+GGG | + | chr7_3:52821418-52821437 | Msa1109310:intron | 50.0% |
| TCGTCCCAACCAGAATGCAA+TGG | - | chr7_3:52821425-52821444 | None:intergenic | 50.0% | |
| GGGATGTGCAAAACTCAGTC+TGG | - | chr7_3:52821457-52821476 | None:intergenic | 50.0% | |
| GTGTGTGAGAGAGTTGTGTG+AGG | - | chr7_3:52821926-52821945 | None:intergenic | 50.0% | |
| CACACAAGAACCAAAAGGCG+CGG | + | chr7_3:52821943-52821962 | Msa1109310:intron | 50.0% | |
| ! | ACACAAGAACCAAAAGGCGC+GGG | + | chr7_3:52821944-52821963 | Msa1109310:intron | 50.0% |
| GTAAACAGAGAAGAACGGCG+CGG | - | chr7_3:52821980-52821999 | None:intergenic | 50.0% | |
| GGCTCAATGCTCCAAAGCAT+TGG | + | chr7_3:52824280-52824299 | Msa1109310:CDS | 50.0% | |
| !! | AGCTTGGTGGTGCCTTTGTA+TGG | + | chr7_3:52824313-52824332 | Msa1109310:intron | 50.0% |
| !! | AGGCACTCCCTTGATTTGTG+TGG | - | chr7_3:52824453-52824472 | None:intergenic | 50.0% |
| AACATGGCGCTGCATCAAGA+TGG | - | chr7_3:52824538-52824557 | None:intergenic | 50.0% | |
| ! | CAGCGCCATGTTCTAGTTGA+TGG | + | chr7_3:52824546-52824565 | Msa1109310:CDS | 50.0% |
| CCCATACCCATAAAACCAGC+AGG | - | chr7_3:52824597-52824616 | None:intergenic | 50.0% | |
| GATTCCGTCTCCACTCTGTA+AGG | + | chr7_3:52824858-52824877 | Msa1109310:CDS | 50.0% | |
| CATCCCTTACAGAGTGGAGA+CGG | - | chr7_3:52824865-52824884 | None:intergenic | 50.0% | |
| ACTCATGACCAGTAGCATCC+TGG | - | chr7_3:52825300-52825319 | None:intergenic | 50.0% | |
| CTTCCTAGCCTCCTCAATGA+CGG | - | chr7_3:52825410-52825429 | None:intergenic | 50.0% | |
| TCATTGAGGAGGCTAGGAAG+CGG | + | chr7_3:52825410-52825429 | Msa1109310:CDS | 50.0% | |
| !! | GCTAATGGTGGCACTGGCAA+TGG | + | chr7_3:52817957-52817976 | Msa1109310:CDS | 55.0% |
| !! | AATGGTGGCACTGGCAATGG+CGG | + | chr7_3:52817960-52817979 | Msa1109310:CDS | 55.0% |
| GCTGTTGGAGCTGCATCATC+TGG | - | chr7_3:52818340-52818359 | None:intergenic | 55.0% | |
| TGCAGCTCCAACAGCAGATG+AGG | + | chr7_3:52818345-52818364 | Msa1109310:CDS | 55.0% | |
| ! | GGGCAATGAGGCCTTGTGAT+CGG | - | chr7_3:52818426-52818445 | None:intergenic | 55.0% |
| TTGGCCACCGTGGTTGAGTA+AGG | - | chr7_3:52819824-52819843 | None:intergenic | 55.0% | |
| TCAACCACGGTGGCCAAATC+AGG | + | chr7_3:52819827-52819846 | Msa1109310:intron | 55.0% | |
| !! | GGCTTTGGGAGTTTGGAAGG+AGG | + | chr7_3:52819917-52819936 | Msa1109310:intron | 55.0% |
| GTTTGGAAGGAGGGGATGGA+AGG | + | chr7_3:52819927-52819946 | Msa1109310:intron | 55.0% | |
| AGCCTCCGAATTCTCAGGGA+CGG | - | chr7_3:52820586-52820605 | None:intergenic | 55.0% | |
| TCCCTGAGAATTCGGAGGCT+CGG | + | chr7_3:52820586-52820605 | Msa1109310:intron | 55.0% | |
| GCAAACAGCTCAACCGAGCT+GGG | - | chr7_3:52820920-52820939 | None:intergenic | 55.0% | |
| TGCAAACAGCTCAACCGAGC+TGG | - | chr7_3:52820921-52820940 | None:intergenic | 55.0% | |
| TCTTGTCTCGATGACAGGGC+CGG | - | chr7_3:52820955-52820974 | None:intergenic | 55.0% | |
| CCGGTCCATTGCATTCTGGT+TGG | + | chr7_3:52821417-52821436 | Msa1109310:intron | 55.0% | |
| ! | TGGTCCAGATGACGGCTTTG+GGG | - | chr7_3:52824433-52824452 | None:intergenic | 55.0% |
| ! | GTGGTCCAGATGACGGCTTT+GGG | - | chr7_3:52824434-52824453 | None:intergenic | 55.0% |
| ! | TGTGGTCCAGATGACGGCTT+TGG | - | chr7_3:52824435-52824454 | None:intergenic | 55.0% |
| ! | TGCAACAGGTTGGAGAGGGA+GGG | - | chr7_3:52825007-52825026 | None:intergenic | 55.0% |
| ! | GCGGATTGTACGCCCATCAT+AGG | - | chr7_3:52825092-52825111 | None:intergenic | 55.0% |
| GTGACTGGAGGAAGGAACAG+AGG | + | chr7_3:52825214-52825233 | Msa1109310:CDS | 55.0% | |
| GGAAGGAACAGAGGTCGTGT+TGG | + | chr7_3:52825223-52825242 | Msa1109310:CDS | 55.0% | |
| ! | CCTTTGGGAAGAGACACCCA+AGG | - | chr7_3:52825370-52825389 | None:intergenic | 55.0% |
| CCTTGGGTGTCTCTTCCCAA+AGG | + | chr7_3:52825367-52825386 | Msa1109310:CDS | 55.0% | |
| GTGTCTCTTCCCAAAGGCAG+AGG | + | chr7_3:52825373-52825392 | Msa1109310:CDS | 55.0% | |
| TGACCGTCATTGAGGAGGCT+AGG | + | chr7_3:52825404-52825423 | Msa1109310:CDS | 55.0% | |
| GATGGCTGCTTCTCAACAGG+TGG | + | chr7_3:52825432-52825451 | Msa1109310:CDS | 55.0% | |
| ! | GTGGCCTTACTCAACCACGG+TGG | + | chr7_3:52819817-52819836 | Msa1109310:intron | 60.0% |
| ACGGTGGCCAAATCAGGCAC+CGG | + | chr7_3:52819833-52819852 | Msa1109310:intron | 60.0% | |
| GGGAGTTTGGAAGGAGGGGA+TGG | + | chr7_3:52819923-52819942 | Msa1109310:intron | 60.0% | |
| CAGGGCCGTCCCTGAGAATT+CGG | + | chr7_3:52820578-52820597 | Msa1109310:intron | 60.0% | |
| GCCGAGCCTCCGAATTCTCA+GGG | - | chr7_3:52820590-52820609 | None:intergenic | 60.0% | |
| AGCCGAGCCTCCGAATTCTC+AGG | - | chr7_3:52820591-52820610 | None:intergenic | 60.0% | |
| AGAATTCGGAGGCTCGGCTC+TGG | + | chr7_3:52820592-52820611 | Msa1109310:intron | 60.0% | |
| GAATTCGGAGGCTCGGCTCT+GGG | + | chr7_3:52820593-52820612 | Msa1109310:intron | 60.0% | |
| TTGAGGTCCATCCTTGGGGG+AGG | + | chr7_3:52820894-52820913 | Msa1109310:intron | 60.0% | |
| GAGCTGTTTGCACCCCCTCA+AGG | + | chr7_3:52820929-52820948 | Msa1109310:intron | 60.0% | |
| TGTTTGCACCCCCTCAAGGC+CGG | + | chr7_3:52820933-52820952 | Msa1109310:intron | 60.0% | |
| AACAGAGAAGAACGGCGCGG+TGG | - | chr7_3:52821977-52821996 | None:intergenic | 60.0% | |
| ! | CTGCAACAGGTTGGAGAGGG+AGG | - | chr7_3:52825008-52825027 | None:intergenic | 60.0% |
| TGAGGAGGCTAGGAAGCGGA+TGG | + | chr7_3:52825414-52825433 | Msa1109310:CDS | 60.0% | |
| GCGGATGGCTGCTTCTCAAC+AGG | + | chr7_3:52825429-52825448 | Msa1109310:CDS | 60.0% | |
| !! | GGTGCCTGATTTGGCCACCG+TGG | - | chr7_3:52819834-52819853 | None:intergenic | 65.0% |
| CGGCCCTGCTCGATGATCCT+TGG | - | chr7_3:52820566-52820585 | None:intergenic | 65.0% | |
| GGCCGTCCCTGAGAATTCGG+AGG | + | chr7_3:52820581-52820600 | Msa1109310:intron | 65.0% | |
| ATGACAGGGCCGGCCTTGAG+GGG | - | chr7_3:52820945-52820964 | None:intergenic | 65.0% | |
| GATGACAGGGCCGGCCTTGA+GGG | - | chr7_3:52820946-52820965 | None:intergenic | 65.0% | |
| ! | GGCAAGGTTCCCGCGCCTTT+TGG | - | chr7_3:52821956-52821975 | None:intergenic | 65.0% |
| AGAAGAACGGCGCGGTGGCA+AGG | - | chr7_3:52821972-52821991 | None:intergenic | 65.0% | |
| CAGGCCCCAAAGCCGTCATC+TGG | + | chr7_3:52824426-52824445 | Msa1109310:intron | 65.0% | |
| !! | GGTGGCACTGGCAATGGCGG+TGG | + | chr7_3:52817963-52817982 | Msa1109310:CDS | 70.0% |
| AGCTGGGCCTCCCCCAAGGA+TGG | - | chr7_3:52820904-52820923 | None:intergenic | 70.0% | |
| TCCTTGGGGGAGGCCCAGCT+CGG | + | chr7_3:52820904-52820923 | Msa1109310:intron | 70.0% | |
| TGACAGGGCCGGCCTTGAGG+GGG | - | chr7_3:52820944-52820963 | None:intergenic | 70.0% | |
| CGATGACAGGGCCGGCCTTG+AGG | - | chr7_3:52820947-52820966 | None:intergenic | 70.0% | |
| ACCGAGCTGGGCCTCCCCCA+AGG | - | chr7_3:52820908-52820927 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 52817528 | 52825732 | 52817528 | ID=Msa1109310;Name=Msa1109310 |
| chr7_3 | mRNA | 52817528 | 52825732 | 52817528 | ID=Msa1109310-mRNA-1;Parent=Msa1109310;Name=Msa1109310-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.6|0.66|1|1|1|6|267|445 |
| chr7_3 | exon | 52817528 | 52818020 | 52817528 | ID=Msa1109310-mRNA-1:exon:11112;Parent=Msa1109310-mRNA-1 |
| chr7_3 | exon | 52818341 | 52818390 | 52818341 | ID=Msa1109310-mRNA-1:exon:11113;Parent=Msa1109310-mRNA-1 |
| chr7_3 | exon | 52824252 | 52824329 | 52824252 | ID=Msa1109310-mRNA-1:exon:11114;Parent=Msa1109310-mRNA-1 |
| chr7_3 | exon | 52824429 | 52824609 | 52824429 | ID=Msa1109310-mRNA-1:exon:11115;Parent=Msa1109310-mRNA-1 |
| chr7_3 | exon | 52824798 | 52824895 | 52824798 | ID=Msa1109310-mRNA-1:exon:11116;Parent=Msa1109310-mRNA-1 |
| chr7_3 | exon | 52825028 | 52825732 | 52825028 | ID=Msa1109310-mRNA-1:exon:11117;Parent=Msa1109310-mRNA-1 |
| chr7_3 | CDS | 52817528 | 52818020 | 52817528 | ID=Msa1109310-mRNA-1:cds;Parent=Msa1109310-mRNA-1 |
| chr7_3 | CDS | 52818341 | 52818390 | 52818341 | ID=Msa1109310-mRNA-1:cds;Parent=Msa1109310-mRNA-1 |
| chr7_3 | CDS | 52824252 | 52824329 | 52824252 | ID=Msa1109310-mRNA-1:cds;Parent=Msa1109310-mRNA-1 |
| chr7_3 | CDS | 52824429 | 52824609 | 52824429 | ID=Msa1109310-mRNA-1:cds;Parent=Msa1109310-mRNA-1 |
| chr7_3 | CDS | 52824798 | 52824895 | 52824798 | ID=Msa1109310-mRNA-1:cds;Parent=Msa1109310-mRNA-1 |
| chr7_3 | CDS | 52825028 | 52825465 | 52825028 | ID=Msa1109310-mRNA-1:cds;Parent=Msa1109310-mRNA-1 |
| chr7_3 | three_prime_UTR | 52825466 | 52825732 | 52825466 | ID=Msa1109310-mRNA-1:three_prime_utr;Parent=Msa1109310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
