AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0547090


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0547090 MtrunA17_Chr4g0028991 96.452 620 2 2 1 600 1 620 0.0 1222
Msa0547090 MtrunA17_Chr2g0326731 77.939 621 108 6 3 600 1 615 0.0 1002
Msa0547090 MtrunA17_Chr2g0292391 69.836 610 150 5 19 598 4 609 0.0 870
Msa0547090 MtrunA17_Chr2g0331131 66.230 610 164 9 24 600 10 610 0.0 803
Msa0547090 MtrunA17_Chr8g0340411 65.303 611 170 11 21 600 7 606 0.0 792
Msa0547090 MtrunA17_Chr3g0140351 65.615 602 176 7 24 600 16 611 0.0 790
Msa0547090 MtrunA17_Chr3g0095891 94.382 89 5 0 599 687 373 461 1.17e-49 180
Msa0547090 MtrunA17_Chr5g0442921 89.888 89 8 1 599 687 469 556 1.66e-46 173
Msa0547090 MtrunA17_Chr2g0331581 24.621 528 275 20 29 463 143 640 9.97e-22 100
Msa0547090 MtrunA17_Chr2g0322731 24.515 412 232 16 192 575 345 705 9.78e-16 81.3
Msa0547090 MtrunA17_Chr2g0322731 34.653 101 59 2 12 109 87 183 4.40e-12 69.7
Msa0547090 MtrunA17_Chr7g0275731 40.698 86 49 2 599 684 401 484 1.90e-14 76.6
Msa0547090 MtrunA17_Chr7g0267171 34.234 111 64 2 583 684 355 465 4.48e-14 75.1
Msa0547090 MtrunA17_Chr4g0024351 22.628 411 239 15 192 574 304 663 6.99e-12 68.9
Msa0547090 MtrunA17_Chr4g0024351 35.354 99 57 2 9 104 44 138 5.71e-11 65.9
Msa0547090 MtrunA17_Chr6g0484901 31.915 94 63 1 591 684 399 491 1.88e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0547090 AT5G60690.1 82.010 617 87 6 3 600 1 612 0.0 1043
Msa0547090 AT2G34710.1 69.218 614 155 6 19 600 16 627 0.0 855
Msa0547090 AT1G30490.1 66.879 628 169 7 7 600 2 624 0.0 842
Msa0547090 AT4G32880.1 64.935 616 178 9 17 600 3 612 0.0 801
Msa0547090 AT1G52150.3 66.993 612 153 10 24 600 13 610 0.0 798
Msa0547090 AT1G52150.2 66.993 612 154 10 24 600 13 611 0.0 798
Msa0547090 AT1G52150.1 66.993 612 153 10 24 600 13 610 0.0 797
Msa0547090 AT3G59080.2 68.539 89 27 1 599 687 412 499 4.54e-35 140
Msa0547090 AT3G59080.1 68.539 89 27 1 599 687 448 535 8.05e-35 139
Msa0547090 AT2G42980.1 67.033 91 27 2 599 687 438 527 1.06e-32 133
Msa0547090 AT5G32670.1 67.143 70 23 0 272 341 37 106 5.40e-26 106
Msa0547090 AT1G79840.3 23.511 638 347 27 28 580 46 627 3.71e-24 108
Msa0547090 AT1G79840.6 23.511 638 347 27 28 580 46 627 3.71e-24 108
Msa0547090 AT1G79840.1 23.511 638 347 27 28 580 104 685 3.85e-24 108
Msa0547090 AT1G79840.2 23.511 638 347 27 28 580 133 714 8.75e-24 107
Msa0547090 AT1G79840.4 24.335 526 306 21 28 479 104 611 5.03e-23 104
Msa0547090 AT5G52170.3 23.474 426 260 13 29 401 61 473 4.29e-15 79.7
Msa0547090 AT5G52170.1 23.474 426 260 13 29 401 61 473 4.29e-15 79.7
Msa0547090 AT5G52170.2 23.861 373 222 10 29 351 61 421 6.20e-15 79.0
Msa0547090 AT3G52500.1 33.333 102 61 2 591 685 367 468 8.95e-14 74.7
Msa0547090 AT1G01300.1 38.372 86 51 2 599 684 401 484 4.17e-13 72.8
Msa0547090 AT4G21750.2 23.310 429 243 18 175 575 306 676 4.85e-13 73.2
Msa0547090 AT4G21750.1 23.310 429 243 18 175 575 306 676 4.85e-13 73.2
Msa0547090 AT4G21750.3 23.310 429 243 18 175 575 306 676 4.85e-13 73.2
Msa0547090 AT4G21750.4 23.310 429 243 18 175 575 306 676 4.85e-13 73.2
Msa0547090 AT1G05230.8 24.272 412 233 16 192 575 300 660 7.45e-13 72.4
Msa0547090 AT1G05230.4 24.272 412 233 16 192 575 300 660 7.45e-13 72.4
Msa0547090 AT1G05230.9 24.272 412 233 16 192 575 300 660 7.45e-13 72.4
Msa0547090 AT1G05230.10 24.272 412 233 16 192 575 300 660 7.45e-13 72.4
Msa0547090 AT1G05230.7 24.272 412 233 16 192 575 300 660 7.45e-13 72.4
Msa0547090 AT1G05230.11 24.272 412 233 16 192 575 300 660 7.45e-13 72.4
Msa0547090 AT1G05230.2 24.272 412 233 16 192 575 300 660 7.45e-13 72.4
Msa0547090 AT1G05230.6 24.272 412 233 16 192 575 300 660 7.45e-13 72.4
Msa0547090 AT1G05230.5 24.272 412 233 16 192 575 300 660 7.45e-13 72.4
Msa0547090 AT1G05230.1 24.272 412 233 16 192 575 300 660 7.45e-13 72.4
Msa0547090 AT1G05230.3 24.757 412 229 17 192 575 300 658 5.00e-12 69.7
Msa0547090 AT3G18490.1 34.653 101 65 1 584 684 401 500 1.30e-11 68.2
Msa0547090 AT1G05230.12 26.460 291 177 11 192 463 300 572 2.50e-11 67.4
Msa0547090 AT1G25510.1 35.714 98 57 2 592 684 387 483 3.79e-11 66.6

Find 194 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGCTCCTGCCCGGGATTTC+TGG 0.127870 4_1:+39816798 Msa0547090:CDS
GATAGAATATGACAAGTTTA+AGG 0.143295 4_1:-39814693 None:intergenic
AAATCTGCACTTTCAATAAT+TGG 0.146871 4_1:+39819297 Msa0547090:CDS
AGAAGAGCTACTTAAATTCT+TGG 0.189495 4_1:-39817675 None:intergenic
CATCACCAACATGCTTATTA+AGG 0.209228 4_1:+39814249 Msa0547090:five_prime_UTR
CTCAATGGTTCCTCCATTTC+CGG 0.218751 4_1:-39816666 None:intergenic
ATTATTGAAAGTGCAGATTT+AGG 0.236224 4_1:-39819294 None:intergenic
GAACGTTCCTCCTGCGGTTT+TGG 0.238613 4_1:+39817842 Msa0547090:intron
ACCAAGATAAACGATCTTTA+AGG 0.256930 4_1:-39816601 None:intergenic
AGTTTAAGGGAAAATGAAAA+TGG 0.259645 4_1:-39814679 None:intergenic
TCAAGATAAATGAAAGTTCT+TGG 0.266760 4_1:-39814760 None:intergenic
TAGGGATATTCATCTGTTAC+AGG 0.266795 4_1:+39818257 Msa0547090:CDS
GAAACATTGTGAAAACTTCT+AGG 0.277838 4_1:-39816640 None:intergenic
GATGCTCCATTGGTGCCTTC+TGG 0.293806 4_1:+39818578 Msa0547090:CDS
AGAAAATGAACAAGAAAGTT+TGG 0.295020 4_1:-39814641 None:intergenic
GGCTTCAATGACGCTGTAAA+TGG 0.300316 4_1:+39817581 Msa0547090:CDS
TAAACTTCATTGCACTTCAT+TGG 0.308323 4_1:-39819384 None:intergenic
GCAAAGATCCCAACCGAATC+TGG 0.313476 4_1:-39816374 None:intergenic
GAGAGGTCCCTGTCTGGTTC+TGG 0.318135 4_1:+39816954 Msa0547090:CDS
GTGGCTACCTGCTCAATCTT+TGG 0.322456 4_1:-39817434 None:intergenic
TGAGCAGCAGCAGTTGGATT+AGG 0.323234 4_1:-39816984 None:intergenic
TGCAGATGCTTGAAGTTATT+AGG 0.326140 4_1:+39818193 Msa0547090:intron
TGATTGCCAGTGAATCTTGT+AGG 0.327004 4_1:-39817969 None:intergenic
ATAGAATATGACAAGTTTAA+GGG 0.328788 4_1:-39814692 None:intergenic
GATAGGCACTTCGATATATT+AGG 0.337752 4_1:+39817337 Msa0547090:intron
CAGTATCAATCAAGAGAAAA+AGG 0.339257 4_1:-39814277 None:intergenic
TAAAGTGGTCGTAGTACTTC+TGG 0.341715 4_1:-39817195 None:intergenic
ATCTGATGATGTTGTTTGTT+TGG 0.342174 4_1:+39819257 Msa0547090:CDS
TCCCTGTCTGGTTCTGGCAC+TGG 0.345502 4_1:+39816960 Msa0547090:CDS
TCTGGGAACATTTCATCAAT+TGG 0.355893 4_1:-39818554 None:intergenic
CTTGAAGTTATTAGGCTTGA+AGG 0.356810 4_1:+39818201 Msa0547090:CDS
CAAGATAAGTTTGAATGAAA+TGG 0.365439 4_1:-39814435 None:intergenic
GGCACCAATGGAGCATCATC+TGG 0.365656 4_1:-39818572 None:intergenic
TCTTAGATACACTACAACTT+TGG 0.376901 4_1:+39816823 Msa0547090:CDS
AGTATGGAATCTACCTTTGT+AGG 0.379475 4_1:-39816455 None:intergenic
ATTGATAAGCATCTAGATTC+AGG 0.380570 4_1:+39814866 Msa0547090:CDS
ACAATGTTTCCTGCCGGAAA+TGG 0.381342 4_1:+39816653 Msa0547090:CDS
GGTGAAGTGGTATACGGATT+AGG 0.388453 4_1:+39817381 Msa0547090:CDS
AACCAAACCTTGATCTGTTT+AGG 0.396617 4_1:-39815016 None:intergenic
TCCTTAAAGATCGTTTATCT+TGG 0.397827 4_1:+39816600 Msa0547090:CDS
CAAGGCTTCAAACTGTGAAT+AGG 0.399527 4_1:+39815183 Msa0547090:CDS
TGGCCAGCCTGGTCCAGATT+CGG 0.410197 4_1:+39816361 Msa0547090:intron
TCGAGTGGTGAAGTGGTATA+CGG 0.413960 4_1:+39817375 Msa0547090:CDS
TAGATTCAGGGAAATATGTT+AGG 0.416438 4_1:+39814879 Msa0547090:CDS
CTACAGGAACTGCTGTTGAT+TGG 0.418349 4_1:+39815928 Msa0547090:CDS
GAGCAGCAGCAGTTGGATTA+GGG 0.419002 4_1:-39816983 None:intergenic
TACAGGAACTGCTGTTGATT+GGG 0.419994 4_1:+39815929 Msa0547090:CDS
TGAATAAAATAATTCTCAAC+AGG 0.421496 4_1:-39819228 None:intergenic
GAAATGGAATTGCCTGACTT+TGG 0.427200 4_1:+39819171 Msa0547090:CDS
TGTTGTCTTCTCATGGAACT+AGG 0.427476 4_1:-39814956 None:intergenic
CAGTGTCCGGTTTGTATTCA+CGG 0.430832 4_1:-39818806 None:intergenic
AACCTAAACAGATCAAGGTT+TGG 0.433904 4_1:+39815014 Msa0547090:CDS
CAATCAAATAATCATGCCTC+TGG 0.439280 4_1:+39817986 Msa0547090:CDS
TTGTAACTTTGCATGAGAAA+TGG 0.439984 4_1:-39814725 None:intergenic
GCAGGAACCTATGCCTATCC+AGG 0.445397 4_1:+39817939 Msa0547090:CDS
GCAAGTTCCCTCACATTGCT+TGG 0.446182 4_1:+39817704 Msa0547090:CDS
AGTGAAGTTGTCTTTGTCCT+AGG 0.447473 4_1:-39814357 None:intergenic
AGCAAAGAAAAGAGGCTTCA+AGG 0.453264 4_1:+39815165 Msa0547090:CDS
GTTTAAGGGAAAATGAAAAT+GGG 0.454899 4_1:-39814678 None:intergenic
AATCAATTGTTGTCTTCTCA+TGG 0.455291 4_1:-39814963 None:intergenic
AGCAATGTGAGGGAACTTGC+TGG 0.458432 4_1:-39817701 None:intergenic
GTTTGTGAGAGGTCCCTGTC+TGG 0.459213 4_1:+39816948 Msa0547090:CDS
CAACGACGCTAGCTCCTGCC+CGG 0.459822 4_1:+39816789 Msa0547090:CDS
GGTTCAATGTTGGAAAGAAT+AGG 0.460052 4_1:-39814995 None:intergenic
AAGTCTCCTCCGCAATTGAT+AGG 0.463644 4_1:-39815884 None:intergenic
CATTGAACCTAAACAGATCA+AGG 0.465302 4_1:+39815009 Msa0547090:CDS
TACTGATGCAAGTTGTGATT+CGG 0.473449 4_1:+39815716 Msa0547090:CDS
CTTCTCATGGAACTAGGCTT+AGG 0.473637 4_1:-39814950 None:intergenic
TGTGAGTGGAATTGAAGAAA+TGG 0.475079 4_1:+39819155 Msa0547090:CDS
GTCTTACTTCAAGATTTAAG+TGG 0.475390 4_1:-39817088 None:intergenic
TTGAGGTTTGTGTGTTGTGT+GGG 0.476400 4_1:+39814779 Msa0547090:five_prime_UTR
ACAAGACTATATTCCTTCCT+AGG 0.476603 4_1:+39814340 Msa0547090:five_prime_UTR
TATCTTGGTTTCGCGAGTGT+CGG 0.476648 4_1:+39816615 Msa0547090:CDS
CTTAATAAGCATGTTGGTGA+TGG 0.477301 4_1:-39814248 None:intergenic
TGTTGATGGAGGAAAATGAT+AGG 0.483631 4_1:+39815228 Msa0547090:CDS
TACTGAACAAGTTGAAGCAT+TGG 0.483862 4_1:+39814907 Msa0547090:CDS
AAGGGAGCACCGCTCAGAAT+GGG 0.484393 4_1:+39817875 Msa0547090:CDS
GAAAACAATATTCCAAAGTC+AGG 0.484590 4_1:-39819183 None:intergenic
ATCTAAGAGTCCAGAAATCC+CGG 0.484814 4_1:-39816808 None:intergenic
GCATCAGTATTTGCTGCTGA+TGG 0.488575 4_1:-39815702 None:intergenic
AAAGAAAGGAATGAAGAAGA+AGG 0.489195 4_1:-39814221 None:intergenic
AGCCTGGTCCAGATTCGGTT+GGG 0.489471 4_1:+39816366 Msa0547090:intron
GAAATGGAGCTTGAGTTAGA+AGG 0.492851 4_1:-39814419 None:intergenic
CGGGCAGGAGCTAGCGTCGT+TGG 0.492905 4_1:-39816788 None:intergenic
AGAGATGCTACTAACCCTGC+TGG 0.494241 4_1:+39815765 Msa0547090:CDS
ACCTTTGGTGATTCATAAAG+TGG 0.494265 4_1:-39817210 None:intergenic
CAGCCTGGTCCAGATTCGGT+TGG 0.495786 4_1:+39816365 Msa0547090:intron
CATTACCTTGTGAACCAAGA+TGG 0.497411 4_1:-39814564 None:intergenic
CATCTTCTTGAGCAAGAGAA+TGG 0.498495 4_1:-39818224 None:intergenic
TGCAATGAACAAGTTGTTGA+TGG 0.500516 4_1:+39815214 Msa0547090:CDS
CTGAATGTTCGCAAAACAGC+AGG 0.501563 4_1:-39817411 None:intergenic
ATCCCAACCGAATCTGGACC+AGG 0.504839 4_1:-39816368 None:intergenic
AAGAACTTTCATTTATCTTG+AGG 0.505756 4_1:+39814762 Msa0547090:five_prime_UTR
GGCCAGTGCCAGAACCAGAC+AGG 0.510237 4_1:-39816962 None:intergenic
ATATATTAGGCAAATAGCTC+AGG 0.515140 4_1:+39817350 Msa0547090:CDS
ACAAGTTGAAGCATTGGAAA+GGG 0.515957 4_1:+39814913 Msa0547090:CDS
TAAGGGAGCACCGCTCAGAA+TGG 0.516788 4_1:+39817874 Msa0547090:CDS
GAGTTCCTTTCAAAGGCTAC+AGG 0.517677 4_1:+39815912 Msa0547090:CDS
CGGACACTGGATTTGACGTC+AGG 0.521504 4_1:+39818820 Msa0547090:CDS
CTTGAGGTTTGTGTGTTGTG+TGG 0.524120 4_1:+39814778 Msa0547090:five_prime_UTR
GATCTGTTTAGGTTCAATGT+TGG 0.526382 4_1:-39815005 None:intergenic
ATAGAAAGTAGTAGTAGTGG+TGG 0.530086 4_1:+39814839 Msa0547090:CDS
CATGGCTATGGCTATGGCTG+TGG 0.534941 4_1:+39814808 Msa0547090:exon
CATCTTGGTTCACAAGGTAA+TGG 0.535554 4_1:+39814565 Msa0547090:five_prime_UTR
CTGTGTATAAATAAGCTCAA+TGG 0.538636 4_1:-39816681 None:intergenic
AAGAAACATGGCTATGGCTA+TGG 0.538767 4_1:+39814802 Msa0547090:exon
AATCAAATAATCATGCCTCT+GGG 0.539339 4_1:+39817987 Msa0547090:CDS
TGGAGCTTGAGTTAGAAGGA+AGG 0.539812 4_1:-39814415 None:intergenic
GAACTGATGAGAACGCTGTT+GGG 0.541622 4_1:+39818507 Msa0547090:CDS
ATGAGGCCTACAAGATTCAC+TGG 0.543583 4_1:+39817963 Msa0547090:CDS
AATAAGCATGTTGGTGATGG+AGG 0.543677 4_1:-39814245 None:intergenic
TTTGACAGAGTTCCTTTCAA+AGG 0.544138 4_1:+39815905 Msa0547090:CDS
TTGATAAGCATCTAGATTCA+GGG 0.546019 4_1:+39814867 Msa0547090:CDS
CGGAAACCAGAAGGCACCAA+TGG 0.546575 4_1:-39818584 None:intergenic
AATCTTGTAGGCCTCATCCC+TGG 0.549464 4_1:-39817957 None:intergenic
ACAAACTGAGCAGCAGCAGT+TGG 0.550292 4_1:-39816990 None:intergenic
CAGTTCCTGTAGCCTTTGAA+AGG 0.551448 4_1:-39815917 None:intergenic
AACAAGTTGAAGCATTGGAA+AGG 0.552407 4_1:+39814912 Msa0547090:CDS
AGGATGCCGTGAATACAAAC+CGG 0.553865 4_1:+39818800 Msa0547090:CDS
AAGTTGTCTTTGTCCTAGGA+AGG 0.553870 4_1:-39814353 None:intergenic
ATGGTTCCTCCATTTCCGGC+AGG 0.554780 4_1:-39816662 None:intergenic
CTGACGTCAAATCCAGTGTC+CGG 0.556266 4_1:-39818819 None:intergenic
TTATGAATCACCAAAGGTGG+TGG 0.558033 4_1:+39817215 Msa0547090:CDS
TTTGCAGAACGTTCCTCCTG+CGG 0.558703 4_1:+39817836 Msa0547090:intron
AATGGAATCAATAAAAGAGA+AGG 0.560120 4_1:-39814500 None:intergenic
ATGGAATCAATAAAAGAGAA+GGG 0.560824 4_1:-39814499 None:intergenic
AAGCCATGTTATAATGTGAG+TGG 0.561828 4_1:+39819141 Msa0547090:intron
GCGATTTCACAAAGTTGTAG+TGG 0.563887 4_1:+39816395 Msa0547090:CDS
TGTAGGCCTCATCCCTGGAT+AGG 0.565752 4_1:-39817952 None:intergenic
GTTCCCAGATGATGCTCCAT+TGG 0.566789 4_1:+39818568 Msa0547090:CDS
TCCTGCTTTCAGTGATGCAG+CGG 0.568391 4_1:-39817922 None:intergenic
GGTCGAATCAAGTAGCCACT+CGG 0.568475 4_1:-39817029 None:intergenic
TAATAGTGAACTTACTGCAA+TGG 0.570234 4_1:-39817250 None:intergenic
TCCGCTGCATCACTGAAAGC+AGG 0.573762 4_1:+39817921 Msa0547090:CDS
TTCACAAAGTTGTAGTGGAG+TGG 0.575629 4_1:+39816400 Msa0547090:CDS
GAACACAATTGAACATGAAG+AGG 0.579319 4_1:+39818010 Msa0547090:CDS
CCTCATCCCTGGATAGGCAT+AGG 0.580110 4_1:-39817946 None:intergenic
CATTCAGCCAAAGATTGAGC+AGG 0.580203 4_1:+39817427 Msa0547090:CDS
ATGTTTCCTGCCGGAAATGG+AGG 0.580359 4_1:+39816656 Msa0547090:CDS
GCACCAATGGAGCATCATCT+GGG 0.585521 4_1:-39818571 None:intergenic
TAGAGAGAAGCAAAGAAAAG+AGG 0.587959 4_1:+39815157 Msa0547090:CDS
CATTGAGCTTATTTATACAC+AGG 0.589032 4_1:+39816682 Msa0547090:CDS
AGTTCCCTCACATTGCTTGG+AGG 0.589621 4_1:+39817707 Msa0547090:CDS
GTAAATGGATTCAGTGATGA+TGG 0.590567 4_1:+39817596 Msa0547090:CDS
CGTGAATACAAACCGGACAC+TGG 0.591523 4_1:+39818807 Msa0547090:CDS
ATTCGACCATGTGATGGTGG+AGG 0.591654 4_1:+39817044 Msa0547090:CDS
AACGACGCTAGCTCCTGCCC+GGG 0.593425 4_1:+39816790 Msa0547090:CDS
GGAACTGATGAGAACGCTGT+TGG 0.594775 4_1:+39818506 Msa0547090:CDS
AGGTTTGGTTCCAAAATCGA+AGG 0.597184 4_1:+39815029 Msa0547090:CDS
AGAGTCCAGAAATCCCGGGC+AGG 0.597452 4_1:-39816803 None:intergenic
TGGTCTATACTGAACTGTGA+TGG 0.602711 4_1:+39817620 Msa0547090:CDS
TTGCAGACTCCTATCAATTG+CGG 0.602778 4_1:+39815875 Msa0547090:intron
CATATAGAAAGTAGTAGTAG+TGG 0.603914 4_1:+39814836 Msa0547090:CDS
GAGATGCTACTAACCCTGCT+GGG 0.605907 4_1:+39815766 Msa0547090:CDS
AGAAAGCGAACCAAAACCGC+AGG 0.606717 4_1:-39817852 None:intergenic
GTCGAATCAAGTAGCCACTC+GGG 0.608954 4_1:-39817028 None:intergenic
AGTACTTCTGGCACACTCCA+CGG 0.612200 4_1:-39817183 None:intergenic
GGGATGATGCGGAAACCAGA+AGG 0.615520 4_1:-39818593 None:intergenic
ATCAAATAATCATGCCTCTG+GGG 0.615769 4_1:+39817988 Msa0547090:CDS
TCAGGAATCGAGTGGTGAAG+TGG 0.617819 4_1:+39817368 Msa0547090:CDS
GCCAGTGCCAGAACCAGACA+GGG 0.617845 4_1:-39816961 None:intergenic
TTGAATCTAATGGGATGATG+CGG 0.619863 4_1:-39818604 None:intergenic
GCATCTCTCTTAGAATTCTG+AGG 0.619916 4_1:-39815750 None:intergenic
ATTCCACTCACATTATAACA+TGG 0.620105 4_1:-39819144 None:intergenic
AAGCGAACCAAAACCGCAGG+AGG 0.620397 4_1:-39817849 None:intergenic
AGCTCAGATATCAAGAAACA+TGG 0.621080 4_1:-39814161 None:intergenic
GAATTCCTCCAAGCAATGTG+AGG 0.621910 4_1:-39817712 None:intergenic
CAGGAACCTATGCCTATCCA+GGG 0.626828 4_1:+39817940 Msa0547090:CDS
CCTATGCCTATCCAGGGATG+AGG 0.627418 4_1:+39817946 Msa0547090:CDS
ATGGATTCAGTGATGATGGT+TGG 0.628950 4_1:+39817600 Msa0547090:CDS
TACACTACAACTTTGGACAA+TGG 0.630488 4_1:+39816830 Msa0547090:CDS
CAGACTCCTATCAATTGCGG+AGG 0.631681 4_1:+39815878 Msa0547090:intron
TGTTAGTTTAGAACCTACAA+AGG 0.632221 4_1:+39816442 Msa0547090:CDS
TACTTGATTCGACCATGTGA+TGG 0.633229 4_1:+39817038 Msa0547090:CDS
TGTGGGAAGAAACATGGCTA+TGG 0.633966 4_1:+39814796 Msa0547090:exon
TTGGTGATGGAGGAAAAGAA+AGG 0.634397 4_1:-39814235 None:intergenic
AATTCCTCCAAGCAATGTGA+GGG 0.636010 4_1:-39817711 None:intergenic
ACTGAACTGTGATGGTGCTG+AGG 0.636112 4_1:+39817628 Msa0547090:CDS
GGAGTGGCAGCTCGAGCTTG+CGG 0.638597 4_1:+39816416 Msa0547090:CDS
TTTGGACAATGGCAGTCTTG+TGG 0.639500 4_1:+39816841 Msa0547090:CDS
TCTAAGAGTCCAGAAATCCC+GGG 0.642124 4_1:-39816807 None:intergenic
GATTTAAGTGGTCTACAATG+TGG 0.642422 4_1:-39817076 None:intergenic
TGTTCAATTGTGTTCCCCAG+AGG 0.648149 4_1:-39818002 None:intergenic
ATTGAACCTCCACCATCACA+TGG 0.648754 4_1:-39817050 None:intergenic
TTGATTCGACCATGTGATGG+TGG 0.653641 4_1:+39817041 Msa0547090:CDS
ACTTTATGAATCACCAAAGG+TGG 0.655976 4_1:+39817212 Msa0547090:CDS
GAATCAATAAAAGAGAAGGG+TGG 0.666901 4_1:-39814496 None:intergenic
GATATGAAGAAATCTAGACT+TGG 0.667212 4_1:+39819354 Msa0547090:CDS
GTGTTGTGTGGGAAGAAACA+TGG 0.667868 4_1:+39814790 Msa0547090:exon
ACCACTTTATGAATCACCAA+AGG 0.678609 4_1:+39817209 Msa0547090:CDS
CAAATAGCTCAGGAATCGAG+TGG 0.680372 4_1:+39817360 Msa0547090:CDS
AGAGCTGAAATGCTCCCGAG+TGG 0.713532 4_1:+39817014 Msa0547090:CDS
AATGAACAAGTTGTTGATGG+AGG 0.713928 4_1:+39815217 Msa0547090:CDS
TGAAATCAGCCCATTCTGAG+CGG 0.726689 4_1:-39817884 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTGTTATATGTTTTAA+AGG - chr4_1:39814528-39814547 None:intergenic 10.0%
!! NNNNNNAAATTAAATGAAGA+TGG + chr4_1:39818988-39819007 Msa0547090:intron 10.0%
!!! AAAATGTACAAAAACATTTT+CGG - chr4_1:39814114-39814133 None:intergenic 15.0%
!!! TTATATGTTTTAAAGGTTAA+TGG - chr4_1:39814521-39814540 None:intergenic 15.0%
!!! ATTGGTTTATAAAATTGATT+CGG - chr4_1:39815576-39815595 None:intergenic 15.0%
!!! AAATTTGATTTCAAATGAAT+TGG - chr4_1:39815594-39815613 None:intergenic 15.0%
!!! ATATTGATGGATATTATATT+TGG + chr4_1:39815661-39815680 Msa0547090:intron 15.0%
!! ATAATTTAGTAGAAAAAACT+TGG - chr4_1:39816317-39816336 None:intergenic 15.0%
!!! TGATTTTTATATCAGTTTTT+TGG + chr4_1:39817530-39817549 Msa0547090:intron 15.0%
!! TCAATAATTTATCAATAGTA+AGG - chr4_1:39818288-39818307 None:intergenic 15.0%
!! TAAACAAATATGATCATTAT+AGG + chr4_1:39818437-39818456 Msa0547090:intron 15.0%
!! ATAGAATATGACAAGTTTAA+GGG - chr4_1:39814695-39814714 None:intergenic 20.0%
!!! TTAGTTTTGTCTTGTTTTTT+TGG + chr4_1:39815114-39815133 Msa0547090:intron 20.0%
!! ATTGAATTCTAGCATTAAAT+TGG - chr4_1:39815434-39815453 None:intergenic 20.0%
!! AATATAGTAATCAATTGTAG+AGG - chr4_1:39815464-39815483 None:intergenic 20.0%
!!! TTGGTTTATAAAATTGATTC+GGG - chr4_1:39815575-39815594 None:intergenic 20.0%
!! TACACAATAGAAAAAGAATT+AGG - chr4_1:39815850-39815869 None:intergenic 20.0%
!!! ATATACTTTAGAGACTTAAT+TGG - chr4_1:39816048-39816067 None:intergenic 20.0%
!!! TTTTAGTCTTTGTCATTAAA+AGG + chr4_1:39816079-39816098 Msa0547090:intron 20.0%
!! TACTTAAAGAACTAAAATGA+AGG + chr4_1:39816130-39816149 Msa0547090:intron 20.0%
!! TTAAAGACAATTGAAATTAG+TGG + chr4_1:39816225-39816244 Msa0547090:intron 20.0%
!!! AATGAAAATTTAACTTCATC+AGG - chr4_1:39818174-39818193 None:intergenic 20.0%
!! TATCGGTAATATATTATCTT+CGG + chr4_1:39818352-39818371 Msa0547090:intron 20.0%
!!! ATGTTACTATTTTCTGTTTT+AGG + chr4_1:39818768-39818787 Msa0547090:intron 20.0%
!!! TGTTACTATTTTCTGTTTTA+GGG + chr4_1:39818769-39818788 Msa0547090:intron 20.0%
!! TGAATAAAATAATTCTCAAC+AGG - chr4_1:39819231-39819250 None:intergenic 20.0%
! AAAAACCTTAATAAGCATGT+TGG - chr4_1:39814257-39814276 None:intergenic 25.0%
! CAAGATAAGTTTGAATGAAA+TGG - chr4_1:39814438-39814457 None:intergenic 25.0%
! ATGGAATCAATAAAAGAGAA+GGG - chr4_1:39814502-39814521 None:intergenic 25.0%
! AATGGAATCAATAAAAGAGA+AGG - chr4_1:39814503-39814522 None:intergenic 25.0%
! AAGAAGAAAAAAAACCATCT+TGG + chr4_1:39814550-39814569 Msa0547090:five_prime_UTR 25.0%
! AAAGTTGAAGTGAAAAAAGA+AGG + chr4_1:39814602-39814621 Msa0547090:five_prime_UTR 25.0%
! AGAAAATGAACAAGAAAGTT+TGG - chr4_1:39814644-39814663 None:intergenic 25.0%
! GTTTAAGGGAAAATGAAAAT+GGG - chr4_1:39814681-39814700 None:intergenic 25.0%
! AGTTTAAGGGAAAATGAAAA+TGG - chr4_1:39814682-39814701 None:intergenic 25.0%
! GATAGAATATGACAAGTTTA+AGG - chr4_1:39814696-39814715 None:intergenic 25.0%
! TCAAGATAAATGAAAGTTCT+TGG - chr4_1:39814763-39814782 None:intergenic 25.0%
! AAGAACTTTCATTTATCTTG+AGG + chr4_1:39814762-39814781 Msa0547090:five_prime_UTR 25.0%
!! TCATGTCATAATTCTACTTT+TGG + chr4_1:39815336-39815355 Msa0547090:intron 25.0%
!!! AGAATTGATTTTGACATGTT+TGG + chr4_1:39815386-39815405 Msa0547090:intron 25.0%
!!! TTAGTGCATTTTTGGTATTT+TGG - chr4_1:39815623-39815642 None:intergenic 25.0%
!!! GATTTTTTTTTCTGTCTTGA+AGG + chr4_1:39815821-39815840 Msa0547090:intron 25.0%
! TCTTTGTCATTAAAAGGTTA+GGG + chr4_1:39816085-39816104 Msa0547090:intron 25.0%
! GAAGGATTTGATATTCTTTA+AGG + chr4_1:39816148-39816167 Msa0547090:intron 25.0%
!!! GTATACATTTGTTATTCTCT+TGG + chr4_1:39816341-39816360 Msa0547090:intron 25.0%
!! TTACATCTTATTTGGAAGTA+TGG - chr4_1:39816474-39816493 None:intergenic 25.0%
!!! AGTTTGTTGACTAATGTTAT+TGG + chr4_1:39817304-39817323 Msa0547090:intron 25.0%
! TAAAAACTAACATCCCAAAA+CGG - chr4_1:39817806-39817825 None:intergenic 25.0%
! TATGTAAGAAGAGGTTAATA+GGG - chr4_1:39818318-39818337 None:intergenic 25.0%
! TTATGTAAGAAGAGGTTAAT+AGG - chr4_1:39818319-39818338 None:intergenic 25.0%
! TAATATATTACCGATAGATC+TGG - chr4_1:39818348-39818367 None:intergenic 25.0%
! TATATTATCTTCGGTACAAA+TGG + chr4_1:39818361-39818380 Msa0547090:intron 25.0%
! CATACAAGAAATCATTTCAT+CGG - chr4_1:39818400-39818419 None:intergenic 25.0%
!! TGATTTCTTGTATGTAGTTT+TGG + chr4_1:39818406-39818425 Msa0547090:intron 25.0%
!!! TAACTGGTTTTGAATCTAAT+GGG - chr4_1:39818616-39818635 None:intergenic 25.0%
!!! TTAACTGGTTTTGAATCTAA+TGG - chr4_1:39818617-39818636 None:intergenic 25.0%
!! ACACTTAATTTGAGTAAATC+AGG - chr4_1:39818691-39818710 None:intergenic 25.0%
! AAATTAAATGAAGATGGTTC+TGG + chr4_1:39818994-39819013 Msa0547090:intron 25.0%
! AGCATTCATGAAGAAAATTA+AGG + chr4_1:39819086-39819105 Msa0547090:intron 25.0%
! GCATTCATGAAGAAAATTAA+GGG + chr4_1:39819087-39819106 Msa0547090:intron 25.0%
!!! ACATTATAACATGGCTTTAA+AGG - chr4_1:39819138-39819157 None:intergenic 25.0%
!!! TTTGGAATATTGTTTTCAGA+TGG + chr4_1:39819189-39819208 Msa0547090:CDS 25.0%
!!! TTGTTTGTTTGGCTATTTTA+GGG + chr4_1:39819268-39819287 Msa0547090:CDS 25.0%
!! ATTATTGAAAGTGCAGATTT+AGG - chr4_1:39819297-39819316 None:intergenic 25.0%
! AAATCTGCACTTTCAATAAT+TGG + chr4_1:39819297-39819316 Msa0547090:CDS 25.0%
AAAGAAAGGAATGAAGAAGA+AGG - chr4_1:39814224-39814243 None:intergenic 30.0%
CAGTATCAATCAAGAGAAAA+AGG - chr4_1:39814280-39814299 None:intergenic 30.0%
!!! TGTCTTTGTTGCTGTTTTTT+TGG - chr4_1:39814323-39814342 None:intergenic 30.0%
TTGTAACTTTGCATGAGAAA+TGG - chr4_1:39814728-39814747 None:intergenic 30.0%
CATATAGAAAGTAGTAGTAG+TGG + chr4_1:39814836-39814855 Msa0547090:CDS 30.0%
ATTGATAAGCATCTAGATTC+AGG + chr4_1:39814866-39814885 Msa0547090:CDS 30.0%
TTGATAAGCATCTAGATTCA+GGG + chr4_1:39814867-39814886 Msa0547090:CDS 30.0%
TAGATTCAGGGAAATATGTT+AGG + chr4_1:39814879-39814898 Msa0547090:CDS 30.0%
AATCAATTGTTGTCTTCTCA+TGG - chr4_1:39814966-39814985 None:intergenic 30.0%
! GTTTTCAATACCTTCGATTT+TGG - chr4_1:39815042-39815061 None:intergenic 30.0%
!! ATCGAAGGTATTGAAAACTT+TGG + chr4_1:39815044-39815063 Msa0547090:intron 30.0%
!!! TTTGGTGTTTAATGTTTTGC+AGG + chr4_1:39815132-39815151 Msa0547090:intron 30.0%
!! TGTCATAATTCTACTTTTGG+AGG + chr4_1:39815339-39815358 Msa0547090:intron 30.0%
GTAATCAATTGTAGAGGAAA+AGG - chr4_1:39815458-39815477 None:intergenic 30.0%
TCAATTCACTTTGACATGAA+CGG + chr4_1:39815501-39815520 Msa0547090:intron 30.0%
ACCAAAAATGCACTAAGTTA+AGG + chr4_1:39815627-39815646 Msa0547090:intron 30.0%
ATCCATCAATATCAATTCCA+AGG - chr4_1:39815653-39815672 None:intergenic 30.0%
TCTTCGTACTAAATTTAGCA+AGG - chr4_1:39815991-39816010 None:intergenic 30.0%
! TTGGAGAGAGTGATATTTTA+GGG - chr4_1:39816029-39816048 None:intergenic 30.0%
! ATTGGAGAGAGTGATATTTT+AGG - chr4_1:39816030-39816049 None:intergenic 30.0%
GTCTTTGTCATTAAAAGGTT+AGG + chr4_1:39816084-39816103 Msa0547090:intron 30.0%
ACAATTGAAATTAGTGGTCA+TGG + chr4_1:39816231-39816250 Msa0547090:intron 30.0%
! TGTTAGTTTAGAACCTACAA+AGG + chr4_1:39816442-39816461 Msa0547090:CDS 30.0%
! CCACACTTTTACATCTTATT+TGG - chr4_1:39816482-39816501 None:intergenic 30.0%
CCAAATAAGATGTAAAAGTG+TGG + chr4_1:39816479-39816498 Msa0547090:intron 30.0%
!! GCAATTTTTCTGTCATTTGT+TGG + chr4_1:39816505-39816524 Msa0547090:intron 30.0%
TCCTTAAAGATCGTTTATCT+TGG + chr4_1:39816600-39816619 Msa0547090:CDS 30.0%
ACCAAGATAAACGATCTTTA+AGG - chr4_1:39816604-39816623 None:intergenic 30.0%
GAAACATTGTGAAAACTTCT+AGG - chr4_1:39816643-39816662 None:intergenic 30.0%
CTGTGTATAAATAAGCTCAA+TGG - chr4_1:39816684-39816703 None:intergenic 30.0%
CATTGAGCTTATTTATACAC+AGG + chr4_1:39816682-39816701 Msa0547090:CDS 30.0%
TCTTAGATACACTACAACTT+TGG + chr4_1:39816823-39816842 Msa0547090:CDS 30.0%
! TGGTGAGTATATTTTTCATC+TGG + chr4_1:39816861-39816880 Msa0547090:intron 30.0%
! TATATTTTTCATCTGGTGCA+TGG + chr4_1:39816868-39816887 Msa0547090:intron 30.0%
GTCTTACTTCAAGATTTAAG+TGG - chr4_1:39817091-39817110 None:intergenic 30.0%
TAATAGTGAACTTACTGCAA+TGG - chr4_1:39817253-39817272 None:intergenic 30.0%
ATATATTAGGCAAATAGCTC+AGG + chr4_1:39817350-39817369 Msa0547090:CDS 30.0%
AGGAAACAAATCATTTCATG+TGG - chr4_1:39817456-39817475 None:intergenic 30.0%
!! GAAATGATTTGTTTCCTTGA+AGG + chr4_1:39817459-39817478 Msa0547090:intron 30.0%
AGAAGAGCTACTTAAATTCT+TGG - chr4_1:39817678-39817697 None:intergenic 30.0%
! ATTTTCAACAGTTACCGTTT+TGG + chr4_1:39817789-39817808 Msa0547090:intron 30.0%
! TTTTCAACAGTTACCGTTTT+GGG + chr4_1:39817790-39817809 Msa0547090:intron 30.0%
AATCAAATAATCATGCCTCT+GGG + chr4_1:39817987-39818006 Msa0547090:CDS 30.0%
TCAAAATGTCTTTAGTGTTG+TGG + chr4_1:39818067-39818086 Msa0547090:intron 30.0%
!! AAGAAGATGCTTTTGTTTCT+AGG + chr4_1:39818238-39818257 Msa0547090:CDS 30.0%
!!! AGAAGATGCTTTTGTTTCTA+GGG + chr4_1:39818239-39818258 Msa0547090:CDS 30.0%
ATCATTATAGGTATGTACTG+AGG + chr4_1:39818449-39818468 Msa0547090:intron 30.0%
! ATCTTTTTGCAGATATGTAG+TGG + chr4_1:39818485-39818504 Msa0547090:intron 30.0%
CAATAGAGAGGAAAAAAGAA+GGG - chr4_1:39818648-39818667 None:intergenic 30.0%
TCAATAGAGAGGAAAAAAGA+AGG - chr4_1:39818649-39818668 None:intergenic 30.0%
GAAAAATTAGCTCAATAGAG+AGG - chr4_1:39818660-39818679 None:intergenic 30.0%
TCAAATTAAGTGTCTTCCTA+TGG + chr4_1:39818698-39818717 Msa0547090:intron 30.0%
TCTTGAATAATCTCATAAGC+AGG - chr4_1:39819066-39819085 None:intergenic 30.0%
ATTCCACTCACATTATAACA+TGG - chr4_1:39819147-39819166 None:intergenic 30.0%
GAAAACAATATTCCAAAGTC+AGG - chr4_1:39819186-39819205 None:intergenic 30.0%
! ATCTGATGATGTTGTTTGTT+TGG + chr4_1:39819257-39819276 Msa0547090:CDS 30.0%
!! GTTGTTTGTTTGGCTATTTT+AGG + chr4_1:39819267-39819286 Msa0547090:CDS 30.0%
GATATGAAGAAATCTAGACT+TGG + chr4_1:39819354-39819373 Msa0547090:CDS 30.0%
TAAACTTCATTGCACTTCAT+TGG - chr4_1:39819387-39819406 None:intergenic 30.0%
AGCTCAGATATCAAGAAACA+TGG - chr4_1:39814164-39814183 None:intergenic 35.0%
! CTTAATAAGCATGTTGGTGA+TGG - chr4_1:39814251-39814270 None:intergenic 35.0%
CATCACCAACATGCTTATTA+AGG + chr4_1:39814249-39814268 Msa0547090:five_prime_UTR 35.0%
ACAAGACTATATTCCTTCCT+AGG + chr4_1:39814340-39814359 Msa0547090:five_prime_UTR 35.0%
GAATCAATAAAAGAGAAGGG+TGG - chr4_1:39814499-39814518 None:intergenic 35.0%
AAAAACCATCTTGGTTCACA+AGG + chr4_1:39814559-39814578 Msa0547090:five_prime_UTR 35.0%
ATAGAAAGTAGTAGTAGTGG+TGG + chr4_1:39814839-39814858 Msa0547090:CDS 35.0%
! TACTGAACAAGTTGAAGCAT+TGG + chr4_1:39814907-39814926 Msa0547090:CDS 35.0%
!! AACAAGTTGAAGCATTGGAA+AGG + chr4_1:39814912-39814931 Msa0547090:CDS 35.0%
!! ACAAGTTGAAGCATTGGAAA+GGG + chr4_1:39814913-39814932 Msa0547090:CDS 35.0%
GGTTCAATGTTGGAAAGAAT+AGG - chr4_1:39814998-39815017 None:intergenic 35.0%
! GATCTGTTTAGGTTCAATGT+TGG - chr4_1:39815008-39815027 None:intergenic 35.0%
CATTGAACCTAAACAGATCA+AGG + chr4_1:39815009-39815028 Msa0547090:CDS 35.0%
AACCTAAACAGATCAAGGTT+TGG + chr4_1:39815014-39815033 Msa0547090:CDS 35.0%
AACCAAACCTTGATCTGTTT+AGG - chr4_1:39815019-39815038 None:intergenic 35.0%
TCTACAAGTTTGAGCTTCAT+TGG + chr4_1:39815069-39815088 Msa0547090:intron 35.0%
TAGAGAGAAGCAAAGAAAAG+AGG + chr4_1:39815157-39815176 Msa0547090:CDS 35.0%
TGCAATGAACAAGTTGTTGA+TGG + chr4_1:39815214-39815233 Msa0547090:CDS 35.0%
! AATGAACAAGTTGTTGATGG+AGG + chr4_1:39815217-39815236 Msa0547090:CDS 35.0%
! TGTTGATGGAGGAAAATGAT+AGG + chr4_1:39815228-39815247 Msa0547090:CDS 35.0%
! TGTGTGAGAATGGATTTATG+AGG + chr4_1:39815276-39815295 Msa0547090:intron 35.0%
TTGCATACTGTAAGTGTATG+AGG + chr4_1:39815305-39815324 Msa0547090:intron 35.0%
!! CATAATTCTACTTTTGGAGG+AGG + chr4_1:39815342-39815361 Msa0547090:intron 35.0%
! GCCTTAACTTAGTGCATTTT+TGG - chr4_1:39815631-39815650 None:intergenic 35.0%
TACTGATGCAAGTTGTGATT+CGG + chr4_1:39815716-39815735 Msa0547090:CDS 35.0%
TTTGACAGAGTTCCTTTCAA+AGG + chr4_1:39815905-39815924 Msa0547090:CDS 35.0%
! AATTAGTGGTCATGGCTTTT+AGG + chr4_1:39816239-39816258 Msa0547090:intron 35.0%
!! CTATGCCGATTTGAAAATGA+AGG + chr4_1:39816291-39816310 Msa0547090:intron 35.0%
!! CTTGGCCTTCATTTTCAAAT+CGG - chr4_1:39816299-39816318 None:intergenic 35.0%
AGTATGGAATCTACCTTTGT+AGG - chr4_1:39816458-39816477 None:intergenic 35.0%
TATGTCTGTAGCAAATCTGA+AGG - chr4_1:39816764-39816783 None:intergenic 35.0%
TACACTACAACTTTGGACAA+TGG + chr4_1:39816830-39816849 Msa0547090:CDS 35.0%
ATCTGGTGCATGGTAATAAA+AGG + chr4_1:39816878-39816897 Msa0547090:intron 35.0%
!! GCATTTGATTCCACTTTTGA+AGG + chr4_1:39816926-39816945 Msa0547090:intron 35.0%
GATTTAAGTGGTCTACAATG+TGG - chr4_1:39817079-39817098 None:intergenic 35.0%
ACCACTTTATGAATCACCAA+AGG + chr4_1:39817209-39817228 Msa0547090:CDS 35.0%
! ACCTTTGGTGATTCATAAAG+TGG - chr4_1:39817213-39817232 None:intergenic 35.0%
ACTTTATGAATCACCAAAGG+TGG + chr4_1:39817212-39817231 Msa0547090:CDS 35.0%
!! TTATTGGTGCCTTTTGTGAT+AGG + chr4_1:39817320-39817339 Msa0547090:intron 35.0%
GATAGGCACTTCGATATATT+AGG + chr4_1:39817337-39817356 Msa0547090:intron 35.0%
CAATCAAATAATCATGCCTC+TGG + chr4_1:39817986-39818005 Msa0547090:CDS 35.0%
ATCAAATAATCATGCCTCTG+GGG + chr4_1:39817988-39818007 Msa0547090:CDS 35.0%
GAACACAATTGAACATGAAG+AGG + chr4_1:39818010-39818029 Msa0547090:CDS 35.0%
CACTCTACATAACATGCTAA+TGG - chr4_1:39818096-39818115 None:intergenic 35.0%
TGCAGATGCTTGAAGTTATT+AGG + chr4_1:39818193-39818212 Msa0547090:intron 35.0%
CTTGAAGTTATTAGGCTTGA+AGG + chr4_1:39818201-39818220 Msa0547090:CDS 35.0%
TAGGGATATTCATCTGTTAC+AGG + chr4_1:39818257-39818276 Msa0547090:CDS 35.0%
TCTGGGAACATTTCATCAAT+TGG - chr4_1:39818557-39818576 None:intergenic 35.0%
TTGAATCTAATGGGATGATG+CGG - chr4_1:39818607-39818626 None:intergenic 35.0%
AGAAGGGAACAAAACTTAAC+TGG - chr4_1:39818632-39818651 None:intergenic 35.0%
AATTAAGTGTCTTCCTATGG+CGG + chr4_1:39818701-39818720 Msa0547090:intron 35.0%
!!! TCTGTTTTAGGGTGATAAGA+AGG + chr4_1:39818780-39818799 Msa0547090:intron 35.0%
!! TTAAATGAAGATGGTTCTGG+TGG + chr4_1:39818997-39819016 Msa0547090:intron 35.0%
! GGTGGTACAATAATTGATTC+TGG + chr4_1:39819015-39819034 Msa0547090:intron 35.0%
AAGCCATGTTATAATGTGAG+TGG + chr4_1:39819141-39819160 Msa0547090:intron 35.0%
TGTGAGTGGAATTGAAGAAA+TGG + chr4_1:39819155-39819174 Msa0547090:CDS 35.0%
!! TTGGTGATGGAGGAAAAGAA+AGG - chr4_1:39814238-39814257 None:intergenic 40.0%
!! AATAAGCATGTTGGTGATGG+AGG - chr4_1:39814248-39814267 None:intergenic 40.0%
AAGTTGTCTTTGTCCTAGGA+AGG - chr4_1:39814356-39814375 None:intergenic 40.0%
AGTGAAGTTGTCTTTGTCCT+AGG - chr4_1:39814360-39814379 None:intergenic 40.0%
GAAATGGAGCTTGAGTTAGA+AGG - chr4_1:39814422-39814441 None:intergenic 40.0%
CATTACCTTGTGAACCAAGA+TGG - chr4_1:39814567-39814586 None:intergenic 40.0%
CATCTTGGTTCACAAGGTAA+TGG + chr4_1:39814565-39814584 Msa0547090:five_prime_UTR 40.0%
TTGAGGTTTGTGTGTTGTGT+GGG + chr4_1:39814779-39814798 Msa0547090:five_prime_UTR 40.0%
AAGAAACATGGCTATGGCTA+TGG + chr4_1:39814802-39814821 Msa0547090:exon 40.0%
TGTTGTCTTCTCATGGAACT+AGG - chr4_1:39814959-39814978 None:intergenic 40.0%
! AGGTTTGGTTCCAAAATCGA+AGG + chr4_1:39815029-39815048 Msa0547090:CDS 40.0%
AGCAAAGAAAAGAGGCTTCA+AGG + chr4_1:39815165-39815184 Msa0547090:CDS 40.0%
CAAGGCTTCAAACTGTGAAT+AGG + chr4_1:39815183-39815202 Msa0547090:CDS 40.0%
!! AATTCTACTTTTGGAGGAGG+CGG + chr4_1:39815345-39815364 Msa0547090:intron 40.0%
AATGCACTAAGTTAAGGCCT+TGG + chr4_1:39815633-39815652 Msa0547090:intron 40.0%
GGCCTTGGAATTGATATTGA+TGG + chr4_1:39815648-39815667 Msa0547090:intron 40.0%
GCATCTCTCTTAGAATTCTG+AGG - chr4_1:39815753-39815772 None:intergenic 40.0%
! AACCCTGCTGGGTAATTTTT+AGG + chr4_1:39815777-39815796 Msa0547090:intron 40.0%
AGCCTAAAAATTACCCAGCA+GGG - chr4_1:39815782-39815801 None:intergenic 40.0%
AAGCCTAAAAATTACCCAGC+AGG - chr4_1:39815783-39815802 None:intergenic 40.0%
TTGCAGACTCCTATCAATTG+CGG + chr4_1:39815875-39815894 Msa0547090:intron 40.0%
! TACAGGAACTGCTGTTGATT+GGG + chr4_1:39815929-39815948 Msa0547090:CDS 40.0%
AAATAAGAGACCTTCATCCC+AGG - chr4_1:39815963-39815982 None:intergenic 40.0%
AAGGTTAGGGACTAACATGA+CGG + chr4_1:39816098-39816117 Msa0547090:intron 40.0%
GCGATTTCACAAAGTTGTAG+TGG + chr4_1:39816395-39816414 Msa0547090:CDS 40.0%
! TTCACAAAGTTGTAGTGGAG+TGG + chr4_1:39816400-39816419 Msa0547090:CDS 40.0%
! GTTTTCACAATGTTTCCTGC+CGG + chr4_1:39816647-39816666 Msa0547090:CDS 40.0%
CAAATCTGAAGGTCACTCAA+AGG - chr4_1:39816753-39816772 None:intergenic 40.0%
ATCTAAGAGTCCAGAAATCC+CGG - chr4_1:39816811-39816830 None:intergenic 40.0%
CTCTCACAAACCTTCAAAAG+TGG - chr4_1:39816939-39816958 None:intergenic 40.0%
!! CACTTTTGAAGGTTTGTGAG+AGG + chr4_1:39816937-39816956 Msa0547090:intron 40.0%
! TACTTGATTCGACCATGTGA+TGG + chr4_1:39817038-39817057 Msa0547090:CDS 40.0%
TTATTCTTGTCTTCTAGCCG+TGG + chr4_1:39817166-39817185 Msa0547090:intron 40.0%
TAAAGTGGTCGTAGTACTTC+TGG - chr4_1:39817198-39817217 None:intergenic 40.0%
TTATGAATCACCAAAGGTGG+TGG + chr4_1:39817215-39817234 Msa0547090:CDS 40.0%
!!! ATTTTTTGAGCCACCACCTT+TGG - chr4_1:39817228-39817247 None:intergenic 40.0%
! ATCGAAGTGCCTATCACAAA+AGG - chr4_1:39817332-39817351 None:intergenic 40.0%
TCCTTGAAGGTCATATCTGT+CGG + chr4_1:39817472-39817491 Msa0547090:intron 40.0%
CTGATGTATTACATCTGCAG+AGG + chr4_1:39817560-39817579 Msa0547090:intron 40.0%
TGGTCTATACTGAACTGTGA+TGG + chr4_1:39817620-39817639 Msa0547090:CDS 40.0%
AATTCCTCCAAGCAATGTGA+GGG - chr4_1:39817714-39817733 None:intergenic 40.0%
TGAGTCTTGAGTCAATGTCA+CGG + chr4_1:39817765-39817784 Msa0547090:intron 40.0%
!!! GGTTTTGGTTCGCTTTCTAA+GGG + chr4_1:39817857-39817876 Msa0547090:CDS 40.0%
TGATTGCCAGTGAATCTTGT+AGG - chr4_1:39817972-39817991 None:intergenic 40.0%
CATCTTCTTGAGCAAGAGAA+TGG - chr4_1:39818227-39818246 None:intergenic 40.0%
ATAAGCTGAGCCAGATCTAT+CGG + chr4_1:39818335-39818354 Msa0547090:intron 40.0%
GAAATGGAATTGCCTGACTT+TGG + chr4_1:39819171-39819190 Msa0547090:CDS 40.0%
! TGTTTTCAGATGGAGCTGTT+TGG + chr4_1:39819199-39819218 Msa0547090:CDS 40.0%
! GTTTTCAGATGGAGCTGTTT+GGG + chr4_1:39819200-39819219 Msa0547090:CDS 40.0%
TGGAGCTTGAGTTAGAAGGA+AGG - chr4_1:39814418-39814437 None:intergenic 45.0%
CTTGAGGTTTGTGTGTTGTG+TGG + chr4_1:39814778-39814797 Msa0547090:five_prime_UTR 45.0%
GTGTTGTGTGGGAAGAAACA+TGG + chr4_1:39814790-39814809 Msa0547090:exon 45.0%
TGTGGGAAGAAACATGGCTA+TGG + chr4_1:39814796-39814815 Msa0547090:exon 45.0%
CTTCTCATGGAACTAGGCTT+AGG - chr4_1:39814953-39814972 None:intergenic 45.0%
TCACAGCTTGTGTGTGAGAA+TGG + chr4_1:39815266-39815285 Msa0547090:intron 45.0%
! GCATCAGTATTTGCTGCTGA+TGG - chr4_1:39815705-39815724 None:intergenic 45.0%
AAGTCTCCTCCGCAATTGAT+AGG - chr4_1:39815887-39815906 None:intergenic 45.0%
GAGTTCCTTTCAAAGGCTAC+AGG + chr4_1:39815912-39815931 Msa0547090:CDS 45.0%
CAGTTCCTGTAGCCTTTGAA+AGG - chr4_1:39815920-39815939 None:intergenic 45.0%
CTACAGGAACTGCTGTTGAT+TGG + chr4_1:39815928-39815947 Msa0547090:CDS 45.0%
TATCTTGGTTTCGCGAGTGT+CGG + chr4_1:39816615-39816634 Msa0547090:CDS 45.0%
ACAATGTTTCCTGCCGGAAA+TGG + chr4_1:39816653-39816672 Msa0547090:CDS 45.0%
CTCAATGGTTCCTCCATTTC+CGG - chr4_1:39816669-39816688 None:intergenic 45.0%
TCTAAGAGTCCAGAAATCCC+GGG - chr4_1:39816810-39816829 None:intergenic 45.0%
TTTGGACAATGGCAGTCTTG+TGG + chr4_1:39816841-39816860 Msa0547090:CDS 45.0%
! TTGATTCGACCATGTGATGG+TGG + chr4_1:39817041-39817060 Msa0547090:CDS 45.0%
ATTGAACCTCCACCATCACA+TGG - chr4_1:39817053-39817072 None:intergenic 45.0%
CAAATAGCTCAGGAATCGAG+TGG + chr4_1:39817360-39817379 Msa0547090:CDS 45.0%
TCGAGTGGTGAAGTGGTATA+CGG + chr4_1:39817375-39817394 Msa0547090:CDS 45.0%
GGTGAAGTGGTATACGGATT+AGG + chr4_1:39817381-39817400 Msa0547090:CDS 45.0%
CTGAATGTTCGCAAAACAGC+AGG - chr4_1:39817414-39817433 None:intergenic 45.0%
CATTCAGCCAAAGATTGAGC+AGG + chr4_1:39817427-39817446 Msa0547090:CDS 45.0%
GGCTTCAATGACGCTGTAAA+TGG + chr4_1:39817581-39817600 Msa0547090:CDS 45.0%
GAATTCCTCCAAGCAATGTG+AGG - chr4_1:39817715-39817734 None:intergenic 45.0%
!!! CGGTTTTGGTTCGCTTTCTA+AGG + chr4_1:39817856-39817875 Msa0547090:CDS 45.0%
TGAAATCAGCCCATTCTGAG+CGG - chr4_1:39817887-39817906 None:intergenic 45.0%
ATGAGGCCTACAAGATTCAC+TGG + chr4_1:39817963-39817982 Msa0547090:CDS 45.0%
TGTTCAATTGTGTTCCCCAG+AGG - chr4_1:39818005-39818024 None:intergenic 45.0%
GGCTCAGCTTATGTAAGAAG+AGG - chr4_1:39818327-39818346 None:intergenic 45.0%
GAACTGATGAGAACGCTGTT+GGG + chr4_1:39818507-39818526 Msa0547090:CDS 45.0%
TCATCACATTCATCCGCCAT+AGG - chr4_1:39818717-39818736 None:intergenic 45.0%
AGGATGCCGTGAATACAAAC+CGG + chr4_1:39818800-39818819 Msa0547090:CDS 45.0%
! CAGTGTCCGGTTTGTATTCA+CGG - chr4_1:39818809-39818828 None:intergenic 45.0%
AGAGATGCTACTAACCCTGC+TGG + chr4_1:39815765-39815784 Msa0547090:CDS 50.0%
GAGATGCTACTAACCCTGCT+GGG + chr4_1:39815766-39815785 Msa0547090:CDS 50.0%
CAGACTCCTATCAATTGCGG+AGG + chr4_1:39815878-39815897 Msa0547090:intron 50.0%
TTGATTGGGTCCAGATGCCT+GGG + chr4_1:39815943-39815962 Msa0547090:intron 50.0%
TGTTATTCTCTTGGCCAGCC+TGG + chr4_1:39816350-39816369 Msa0547090:intron 50.0%
GCAAAGATCCCAACCGAATC+TGG - chr4_1:39816377-39816396 None:intergenic 50.0%
ATGTTTCCTGCCGGAAATGG+AGG + chr4_1:39816656-39816675 Msa0547090:CDS 50.0%
GAGCAGCAGCAGTTGGATTA+GGG - chr4_1:39816986-39817005 None:intergenic 50.0%
TGAGCAGCAGCAGTTGGATT+AGG - chr4_1:39816987-39817006 None:intergenic 50.0%
ACAAACTGAGCAGCAGCAGT+TGG - chr4_1:39816993-39817012 None:intergenic 50.0%
GTCGAATCAAGTAGCCACTC+GGG - chr4_1:39817031-39817050 None:intergenic 50.0%
GGTCGAATCAAGTAGCCACT+CGG - chr4_1:39817032-39817051 None:intergenic 50.0%
!! ATTCGACCATGTGATGGTGG+AGG + chr4_1:39817044-39817063 Msa0547090:CDS 50.0%
AGTACTTCTGGCACACTCCA+CGG - chr4_1:39817186-39817205 None:intergenic 50.0%
TCAGGAATCGAGTGGTGAAG+TGG + chr4_1:39817368-39817387 Msa0547090:CDS 50.0%
GTGGCTACCTGCTCAATCTT+TGG - chr4_1:39817437-39817456 None:intergenic 50.0%
GCCGACAGATATGACCTTCA+AGG - chr4_1:39817476-39817495 None:intergenic 50.0%
GTCATATCTGTCGGCAGTTC+TGG + chr4_1:39817481-39817500 Msa0547090:intron 50.0%
! ACTGAACTGTGATGGTGCTG+AGG + chr4_1:39817628-39817647 Msa0547090:CDS 50.0%
AGCAATGTGAGGGAACTTGC+TGG - chr4_1:39817704-39817723 None:intergenic 50.0%
GCAAGTTCCCTCACATTGCT+TGG + chr4_1:39817704-39817723 Msa0547090:CDS 50.0%
AGTTCCCTCACATTGCTTGG+AGG + chr4_1:39817707-39817726 Msa0547090:CDS 50.0%
TTTGCAGAACGTTCCTCCTG+CGG + chr4_1:39817836-39817855 Msa0547090:intron 50.0%
AGAAAGCGAACCAAAACCGC+AGG - chr4_1:39817855-39817874 None:intergenic 50.0%
TCCTGCTTTCAGTGATGCAG+CGG - chr4_1:39817925-39817944 None:intergenic 50.0%
CAGGAACCTATGCCTATCCA+GGG + chr4_1:39817940-39817959 Msa0547090:CDS 50.0%
AATCTTGTAGGCCTCATCCC+TGG - chr4_1:39817960-39817979 None:intergenic 50.0%
GGAACTGATGAGAACGCTGT+TGG + chr4_1:39818506-39818525 Msa0547090:CDS 50.0%
GTTCCCAGATGATGCTCCAT+TGG + chr4_1:39818568-39818587 Msa0547090:CDS 50.0%
! GCACCAATGGAGCATCATCT+GGG - chr4_1:39818574-39818593 None:intergenic 50.0%
CGTGAATACAAACCGGACAC+TGG + chr4_1:39818807-39818826 Msa0547090:CDS 50.0%
CTGACGTCAAATCCAGTGTC+CGG - chr4_1:39818822-39818841 None:intergenic 50.0%
GTGAACCCAACGACAACTCA+CGG + chr4_1:39818850-39818869 Msa0547090:intron 50.0%
CATGGCTATGGCTATGGCTG+TGG + chr4_1:39814808-39814827 Msa0547090:exon 55.0%
GTTGATTGGGTCCAGATGCC+TGG + chr4_1:39815942-39815961 Msa0547090:intron 55.0%
AGACCTTCATCCCAGGCATC+TGG - chr4_1:39815956-39815975 None:intergenic 55.0%
! AGCCTGGTCCAGATTCGGTT+GGG + chr4_1:39816366-39816385 Msa0547090:intron 55.0%
ATCCCAACCGAATCTGGACC+AGG - chr4_1:39816371-39816390 None:intergenic 55.0%
ATGGTTCCTCCATTTCCGGC+AGG - chr4_1:39816665-39816684 None:intergenic 55.0%
GTTTGTGAGAGGTCCCTGTC+TGG + chr4_1:39816948-39816967 Msa0547090:CDS 55.0%
AGAGCTGAAATGCTCCCGAG+TGG + chr4_1:39817014-39817033 Msa0547090:CDS 55.0%
! GAACGTTCCTCCTGCGGTTT+TGG + chr4_1:39817842-39817861 Msa0547090:intron 55.0%
AAGCGAACCAAAACCGCAGG+AGG - chr4_1:39817852-39817871 None:intergenic 55.0%
!! TAAGGGAGCACCGCTCAGAA+TGG + chr4_1:39817874-39817893 Msa0547090:CDS 55.0%
!! AAGGGAGCACCGCTCAGAAT+GGG + chr4_1:39817875-39817894 Msa0547090:CDS 55.0%
TCCGCTGCATCACTGAAAGC+AGG + chr4_1:39817921-39817940 Msa0547090:CDS 55.0%
GCAGGAACCTATGCCTATCC+AGG + chr4_1:39817939-39817958 Msa0547090:CDS 55.0%
CCTCATCCCTGGATAGGCAT+AGG - chr4_1:39817949-39817968 None:intergenic 55.0%
CCTATGCCTATCCAGGGATG+AGG + chr4_1:39817946-39817965 Msa0547090:CDS 55.0%
TGTAGGCCTCATCCCTGGAT+AGG - chr4_1:39817955-39817974 None:intergenic 55.0%
! GGCACCAATGGAGCATCATC+TGG - chr4_1:39818575-39818594 None:intergenic 55.0%
! GATGCTCCATTGGTGCCTTC+TGG + chr4_1:39818578-39818597 Msa0547090:CDS 55.0%
!! CGGAAACCAGAAGGCACCAA+TGG - chr4_1:39818587-39818606 None:intergenic 55.0%
GGGATGATGCGGAAACCAGA+AGG - chr4_1:39818596-39818615 None:intergenic 55.0%
CGGACACTGGATTTGACGTC+AGG + chr4_1:39818820-39818839 Msa0547090:CDS 55.0%
CACTGCCGTGAGTTGTCGTT+GGG - chr4_1:39818858-39818877 None:intergenic 55.0%
GGTCCAGATGCCTGGGATGA+AGG + chr4_1:39815950-39815969 Msa0547090:intron 60.0%
TGGCCAGCCTGGTCCAGATT+CGG + chr4_1:39816361-39816380 Msa0547090:intron 60.0%
CAACCGAATCTGGACCAGGC+TGG - chr4_1:39816367-39816386 None:intergenic 60.0%
! CAGCCTGGTCCAGATTCGGT+TGG + chr4_1:39816365-39816384 Msa0547090:intron 60.0%
TAGCTCCTGCCCGGGATTTC+TGG + chr4_1:39816798-39816817 Msa0547090:CDS 60.0%
AGAGTCCAGAAATCCCGGGC+AGG - chr4_1:39816806-39816825 None:intergenic 60.0%
! GAGAGGTCCCTGTCTGGTTC+TGG + chr4_1:39816954-39816973 Msa0547090:CDS 60.0%
!! TCCCTGTCTGGTTCTGGCAC+TGG + chr4_1:39816960-39816979 Msa0547090:CDS 60.0%
GCCAGTGCCAGAACCAGACA+GGG - chr4_1:39816964-39816983 None:intergenic 60.0%
GCACTGCCGTGAGTTGTCGT+TGG - chr4_1:39818859-39818878 None:intergenic 60.0%
GGAGTGGCAGCTCGAGCTTG+CGG + chr4_1:39816416-39816435 Msa0547090:CDS 65.0%
CAACGACGCTAGCTCCTGCC+CGG + chr4_1:39816789-39816808 Msa0547090:CDS 65.0%
AACGACGCTAGCTCCTGCCC+GGG + chr4_1:39816790-39816809 Msa0547090:CDS 65.0%
GGCCAGTGCCAGAACCAGAC+AGG - chr4_1:39816965-39816984 None:intergenic 65.0%
CGGGCAGGAGCTAGCGTCGT+TGG - chr4_1:39816791-39816810 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 39814106 39819407 39814106 ID=Msa0547090;Name=Msa0547090
chr4_1 mRNA 39814106 39819407 39814106 ID=Msa0547090-mRNA-1;Parent=Msa0547090;Name=Msa0547090-mRNA-1;_AED=0.10;_eAED=0.10;_QI=703|0.73|0.68|1|0.93|0.93|16|0|687
chr4_1 exon 39814106 39815050 39814106 ID=Msa0547090-mRNA-1:exon:10114;Parent=Msa0547090-mRNA-1
chr4_1 exon 39815154 39815274 39815154 ID=Msa0547090-mRNA-1:exon:10115;Parent=Msa0547090-mRNA-1
chr4_1 exon 39815702 39815787 39815702 ID=Msa0547090-mRNA-1:exon:10116;Parent=Msa0547090-mRNA-1
chr4_1 exon 39815881 39815950 39815881 ID=Msa0547090-mRNA-1:exon:10117;Parent=Msa0547090-mRNA-1
chr4_1 exon 39816368 39816463 39816368 ID=Msa0547090-mRNA-1:exon:10118;Parent=Msa0547090-mRNA-1
chr4_1 exon 39816590 39816703 39816590 ID=Msa0547090-mRNA-1:exon:10119;Parent=Msa0547090-mRNA-1
chr4_1 exon 39816779 39816862 39816779 ID=Msa0547090-mRNA-1:exon:10120;Parent=Msa0547090-mRNA-1
chr4_1 exon 39816948 39817103 39816948 ID=Msa0547090-mRNA-1:exon:10121;Parent=Msa0547090-mRNA-1
chr4_1 exon 39817183 39817257 39817183 ID=Msa0547090-mRNA-1:exon:10122;Parent=Msa0547090-mRNA-1
chr4_1 exon 39817342 39817448 39817342 ID=Msa0547090-mRNA-1:exon:10123;Parent=Msa0547090-mRNA-1
chr4_1 exon 39817580 39817763 39817580 ID=Msa0547090-mRNA-1:exon:10124;Parent=Msa0547090-mRNA-1
chr4_1 exon 39817843 39818031 39817843 ID=Msa0547090-mRNA-1:exon:10125;Parent=Msa0547090-mRNA-1
chr4_1 exon 39818198 39818278 39818198 ID=Msa0547090-mRNA-1:exon:10126;Parent=Msa0547090-mRNA-1
chr4_1 exon 39818497 39818631 39818497 ID=Msa0547090-mRNA-1:exon:10127;Parent=Msa0547090-mRNA-1
chr4_1 exon 39818790 39818849 39818790 ID=Msa0547090-mRNA-1:exon:10128;Parent=Msa0547090-mRNA-1
chr4_1 exon 39819144 39819407 39819144 ID=Msa0547090-mRNA-1:exon:10129;Parent=Msa0547090-mRNA-1
chr4_1 five_prime_UTR 39814106 39814808 39814106 ID=Msa0547090-mRNA-1:five_prime_utr;Parent=Msa0547090-mRNA-1
chr4_1 CDS 39814809 39815050 39814809 ID=Msa0547090-mRNA-1:cds;Parent=Msa0547090-mRNA-1
chr4_1 CDS 39815154 39815274 39815154 ID=Msa0547090-mRNA-1:cds;Parent=Msa0547090-mRNA-1
chr4_1 CDS 39815702 39815787 39815702 ID=Msa0547090-mRNA-1:cds;Parent=Msa0547090-mRNA-1
chr4_1 CDS 39815881 39815950 39815881 ID=Msa0547090-mRNA-1:cds;Parent=Msa0547090-mRNA-1
chr4_1 CDS 39816368 39816463 39816368 ID=Msa0547090-mRNA-1:cds;Parent=Msa0547090-mRNA-1
chr4_1 CDS 39816590 39816703 39816590 ID=Msa0547090-mRNA-1:cds;Parent=Msa0547090-mRNA-1
chr4_1 CDS 39816779 39816862 39816779 ID=Msa0547090-mRNA-1:cds;Parent=Msa0547090-mRNA-1
chr4_1 CDS 39816948 39817103 39816948 ID=Msa0547090-mRNA-1:cds;Parent=Msa0547090-mRNA-1
chr4_1 CDS 39817183 39817257 39817183 ID=Msa0547090-mRNA-1:cds;Parent=Msa0547090-mRNA-1
chr4_1 CDS 39817342 39817448 39817342 ID=Msa0547090-mRNA-1:cds;Parent=Msa0547090-mRNA-1
chr4_1 CDS 39817580 39817763 39817580 ID=Msa0547090-mRNA-1:cds;Parent=Msa0547090-mRNA-1
chr4_1 CDS 39817843 39818031 39817843 ID=Msa0547090-mRNA-1:cds;Parent=Msa0547090-mRNA-1
chr4_1 CDS 39818198 39818278 39818198 ID=Msa0547090-mRNA-1:cds;Parent=Msa0547090-mRNA-1
chr4_1 CDS 39818497 39818631 39818497 ID=Msa0547090-mRNA-1:cds;Parent=Msa0547090-mRNA-1
chr4_1 CDS 39818790 39818849 39818790 ID=Msa0547090-mRNA-1:cds;Parent=Msa0547090-mRNA-1
chr4_1 CDS 39819144 39819407 39819144 ID=Msa0547090-mRNA-1:cds;Parent=Msa0547090-mRNA-1
Gene Sequence

>Msa0547090

ATGGCTATGGCTATGGCTGTGGCTCATCATATAGAAAGTAGTAGTAGTGGTGGAAGCATTGATAAGCATCTAGATTCAGGGAAATATGTTAGGTACACTACTGAACAAGTTGAAGCATTGGAAAGGGTTTATGCTGAGTGTCCTAAGCCTAGTTCCATGAGAAGACAACAATTGATTCGTGAGTGTCCTATTCTTTCCAACATTGAACCTAAACAGATCAAGGTTTGGTTCCAAAATCGAAGGTGTAGAGAGAAGCAAAGAAAAGAGGCTTCAAGGCTTCAAACTGTGAATAGGAAATTGTCTGCAATGAACAAGTTGTTGATGGAGGAAAATGATAGGTTGCAGAAACAAGTGTCACAGCTTCCATCAGCAGCAAATACTGATGCAAGTTGTGATTCGGTAGTTACTACTCCTCAGAATTCTAAGAGAGATGCTACTAACCCTGCTGGACTCCTATCAATTGCGGAGGAGACTTTGACAGAGTTCCTTTCAAAGGCTACAGGAACTGCTGTTGATTGGCCTGGTCCAGATTCGGTTGGGATCTTTGCGATTTCACAAAGTTGTAGTGGAGTGGCAGCTCGAGCTTGCGGTCTTGTTAGTTTAGAACCTACAAAGATTGCAGAGATCCTTAAAGATCGTTTATCTTGGTTTCGCGAGTGTCGGAACCTAGAAGTTTTCACAATGTTTCCTGCCGGAAATGGAGGAACCATTGAGCTTATTTATACACAGACATATGCTCCAACGACGCTAGCTCCTGCCCGGGATTTCTGGACTCTTAGATACACTACAACTTTGGACAATGGCAGTCTTGTGGTTTGTGAGAGGTCCCTGTCTGGTTCTGGCACTGGCCCTAATCCAACTGCTGCTGCTCAGTTTGTAAGAGCTGAAATGCTCCCGAGTGGCTACTTGATTCGACCATGTGATGGTGGAGGTTCAATCATCCACATTGTAGACCACTTAAATCTTGAACCGTGGAGTGTGCCAGAAGTACTACGACCACTTTATGAATCACCAAAGGTGGTGGCTCAAAAAATGACCATTGCAGCACTTCGATATATTAGGCAAATAGCTCAGGAATCGAGTGGTGAAGTGGTATACGGATTAGGTAGACAGCCTGCTGTTTTGCGAACATTCAGCCAAAGATTGAGCAGAGGCTTCAATGACGCTGTAAATGGATTCAGTGATGATGGTTGGTCTATACTGAACTGTGATGGTGCTGAGGATGTAATTATTGCTGTTAATTCAACCAAGAATTTAAGTAGCTCTTCTAATCCAGCAAGTTCCCTCACATTGCTTGGAGGAATTCTCTGTGCAAAAGCTTCTATGTTGCTACAAAACGTTCCTCCTGCGGTTTTGGTTCGCTTTCTAAGGGAGCACCGCTCAGAATGGGCTGATTTCAATGTTGATGCATACTCCGCTGCATCACTGAAAGCAGGAACCTATGCCTATCCAGGGATGAGGCCTACAAGATTCACTGGCAATCAAATAATCATGCCTCTGGGGAACACAATTGAACATGAAGAGATGCTTGAAGTTATTAGGCTTGAAGGCCATTCTCTTGCTCAAGAAGATGCTTTTGTTTCTAGGGATATTCATCTGTTACAGATATGTAGTGGAACTGATGAGAACGCTGTTGGGACTTGTTCTGAGCTCATATTTGCTCCAATTGATGAAATGTTCCCAGATGATGCTCCATTGGTGCCTTCTGGTTTCCGCATCATCCCATTAGATTCAAAACCAGGTGATAAGAAGGATGCCGTGAATACAAACCGGACACTGGATTTGACGTCAGGTCTTGAACCATGTTATAATGTGAGTGGAATTGAAGAAATGGAATTGCCTGACTTTGGAATATTGTTTTCAGATGGAGCTGTTTGGGATTTTCCTGTTGAGAATTATTTTATTCAGATTGAATCTGATGATGTTGTTTGTTTGGCTATTTTAGGGACTCCTAAATCTGCACTTTCAATAATTGGAAATTATCAGCAACAGAATTTTCAGATTTTGTATGATATGAAGAAATCTAGACTTGGTTATGCTCCAATGAAGTGCAATGAAGTTTAA

Protein sequence

>Msa0547090

MAMAMAVAHHIESSSSGGSIDKHLDSGKYVRYTTEQVEALERVYAECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSQLPSAANTDASCDSVVTTPQNSKRDATNPAGLLSIAEETLTEFLSKATGTAVDWPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRLSWFRECRNLEVFTMFPAGNGGTIELIYTQTYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGTGPNPTAAAQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEPWSVPEVLRPLYESPKVVAQKMTIAALRYIRQIAQESSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFSDDGWSILNCDGAEDVIIAVNSTKNLSSSSNPASSLTLLGGILCAKASMLLQNVPPAVLVRFLREHRSEWADFNVDAYSAASLKAGTYAYPGMRPTRFTGNQIIMPLGNTIEHEEMLEVIRLEGHSLAQEDAFVSRDIHLLQICSGTDENAVGTCSELIFAPIDEMFPDDAPLVPSGFRIIPLDSKPGDKKDAVNTNRTLDLTSGLEPCYNVSGIEEMELPDFGILFSDGAVWDFPVENYFIQIESDDVVCLAILGTPKSALSIIGNYQQQNFQILYDMKKSRLGYAPMKCNEV*