AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0547430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0547430 MtrunA17_Chr4g0029671 96.338 792 25 1 1 788 1 792 0.0 1590
Msa0547430 MtrunA17_Chr2g0326281 71.532 829 189 12 1 788 1 823 0.0 1143
Msa0547430 MtrunA17_Chr2g0282961 48.611 504 225 9 46 528 45 535 3.55e-146 442
Msa0547430 MtrunA17_Chr4g0046371 50.520 481 220 8 49 523 33 501 2.69e-145 443
Msa0547430 MtrunA17_Chr8g0385791 39.546 617 343 10 38 649 43 634 1.24e-137 427
Msa0547430 MtrunA17_Chr8g0385791 47.748 111 56 1 654 762 705 815 6.77e-29 124
Msa0547430 MtrunA17_Chr2g0276781 49.091 385 180 4 52 435 21 390 4.14e-124 387
Msa0547430 MtrunA17_Chr2g0276781 50.000 132 63 2 649 777 537 668 7.70e-31 129
Msa0547430 MtrunA17_Chr2g0285461 45.397 478 218 13 54 515 23 473 1.94e-111 360
Msa0547430 MtrunA17_Chr2g0285461 43.617 94 51 2 655 747 771 863 3.16e-19 93.2
Msa0547430 MtrunA17_Chr5g0433301 50.674 371 157 6 54 415 24 377 2.88e-110 355
Msa0547430 MtrunA17_Chr5g0433301 43.678 87 47 2 662 747 718 803 6.95e-18 88.6
Msa0547430 MtrunA17_Chr8g0346711 45.854 410 194 10 52 448 27 421 3.90e-110 350
Msa0547430 MtrunA17_Chr8g0346711 55.056 89 39 1 659 747 558 645 1.94e-24 109
Msa0547430 MtrunA17_Chr3g0109391 50.943 371 156 6 54 415 26 379 1.93e-109 353
Msa0547430 MtrunA17_Chr3g0109391 45.977 87 45 2 662 747 726 811 3.87e-18 89.4
Msa0547430 MtrunA17_Chr8g0376771 50.543 368 161 7 54 415 23 375 6.36e-108 351
Msa0547430 MtrunA17_Chr8g0376771 41.489 94 53 2 655 747 777 869 4.56e-18 89.4
Msa0547430 MtrunA17_Chr4g0009751 47.411 367 175 6 54 416 19 371 5.69e-107 340
Msa0547430 MtrunA17_Chr4g0009751 45.238 84 45 1 643 726 539 621 1.36e-15 80.9
Msa0547430 MtrunA17_Chr1g0156321 52.023 346 151 6 54 396 43 376 1.37e-105 343
Msa0547430 MtrunA17_Chr1g0156321 43.956 91 49 2 659 748 754 843 9.31e-18 88.2
Msa0547430 MtrunA17_Chr7g0239061 45.799 369 181 8 52 416 12 365 5.32e-103 332
Msa0547430 MtrunA17_Chr7g0239061 43.200 125 68 2 626 750 539 660 7.66e-25 110
Msa0547430 MtrunA17_Chr4g0070181 51.009 347 152 5 54 396 23 355 2.74e-98 329
Msa0547430 MtrunA17_Chr4g0070181 46.392 97 50 2 654 749 989 1084 5.21e-21 99.0
Msa0547430 MtrunA17_Chr2g0301251 49.709 344 161 3 54 396 23 355 8.46e-98 328
Msa0547430 MtrunA17_Chr2g0301251 46.392 97 50 2 654 749 981 1076 1.95e-20 97.1
Msa0547430 MtrunA17_Chr8g0389081 49.711 346 160 7 54 396 32 366 6.73e-93 314
Msa0547430 MtrunA17_Chr8g0389081 46.739 92 47 2 659 749 985 1075 3.74e-21 99.4
Msa0547430 MtrunA17_Chr2g0326761 41.253 383 173 7 54 399 11 378 4.03e-81 274
Msa0547430 MtrunA17_Chr1g0181211 37.288 413 205 8 54 426 27 425 8.62e-76 259
Msa0547430 MtrunA17_Chr1g0199681 39.655 406 181 11 54 416 94 478 2.74e-75 258
Msa0547430 MtrunA17_Chr4g0028971 39.173 411 183 9 54 416 12 403 5.91e-72 249
Msa0547430 MtrunA17_Chr7g0264171 35.971 417 188 11 54 413 31 425 3.85e-65 228
Msa0547430 MtrunA17_Chr8g0356211 45.022 231 118 4 174 401 2 226 5.11e-61 208
Msa0547430 MtrunA17_Chr3g0115271 35.606 396 207 8 54 416 19 399 7.86e-60 213
Msa0547430 MtrunA17_Chr5g0424931 35.550 391 201 11 54 416 19 386 4.29e-58 207
Msa0547430 MtrunA17_Chr7g0264161 38.629 321 170 8 63 376 1 301 2.73e-57 197
Msa0547430 MtrunA17_Chr5g0417281 34.959 369 204 11 54 414 11 351 1.30e-51 188
Msa0547430 MtrunA17_Chr5g0436761 35.165 364 210 9 54 413 12 353 2.13e-49 181
Msa0547430 MtrunA17_Chr1g0178011 31.452 372 216 9 54 412 12 357 2.49e-46 172
Msa0547430 MtrunA17_Chr5g0417211 34.718 337 184 12 54 382 12 320 5.59e-44 164
Msa0547430 MtrunA17_Chr2g0289221 34.853 307 160 8 54 348 20 298 4.61e-43 160
Msa0547430 MtrunA17_Chr2g0277461 31.063 367 226 9 54 417 13 355 9.20e-39 150
Msa0547430 MtrunA17_Chr5g0424741 29.124 388 239 12 54 417 12 387 2.90e-37 147
Msa0547430 MtrunA17_Chr2g0277531 31.000 300 174 12 54 345 20 294 1.39e-31 125
Msa0547430 MtrunA17_Chr5g0425661 34.450 209 125 3 54 262 37 233 1.82e-31 123
Msa0547430 MtrunA17_Chr5g0424801 29.041 365 231 11 54 412 12 354 1.84e-30 124
Msa0547430 MtrunA17_Chr5g0425261 29.041 365 231 11 54 412 12 354 4.72e-29 119
Msa0547430 MtrunA17_Chr1g0178071 29.630 189 127 3 138 320 48 236 1.83e-11 66.2
Msa0547430 MtrunA17_Chr7g0276471 36.111 108 68 1 164 271 116 222 7.03e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0547430 AT5G60450.2 60.610 754 260 12 48 788 35 764 0.0 842
Msa0547430 AT5G60450.1 60.667 750 258 12 52 788 63 788 0.0 839
Msa0547430 AT2G33860.1 50.104 483 192 9 53 530 53 491 3.07e-146 442
Msa0547430 AT5G62000.2 49.515 412 179 5 52 452 59 452 1.27e-132 415
Msa0547430 AT5G62000.2 51.887 106 51 0 648 753 722 827 6.11e-29 124
Msa0547430 AT5G62000.5 49.515 412 179 5 52 452 59 452 1.27e-132 415
Msa0547430 AT5G62000.5 51.887 106 51 0 648 753 722 827 6.11e-29 124
Msa0547430 AT5G62000.3 49.515 412 179 5 52 452 59 452 1.27e-132 415
Msa0547430 AT5G62000.3 51.887 106 51 0 648 753 722 827 6.11e-29 124
Msa0547430 AT5G62000.1 49.515 412 179 5 52 452 59 452 1.27e-132 415
Msa0547430 AT5G62000.1 51.887 106 51 0 648 753 722 827 6.11e-29 124
Msa0547430 AT5G62000.4 49.515 412 179 5 52 452 59 452 2.22e-132 414
Msa0547430 AT5G62000.4 48.696 115 59 0 648 762 722 836 5.31e-29 124
Msa0547430 AT1G59750.4 48.656 372 164 5 54 416 22 375 3.01e-117 369
Msa0547430 AT1G59750.4 53.636 110 45 1 645 748 517 626 3.42e-29 124
Msa0547430 AT1G59750.2 48.656 372 164 5 54 416 22 375 3.28e-117 369
Msa0547430 AT1G59750.2 53.636 110 45 1 645 748 519 628 3.36e-29 124
Msa0547430 AT1G59750.1 48.656 372 164 5 54 416 22 375 6.19e-117 368
Msa0547430 AT1G59750.1 53.636 110 45 1 645 748 522 631 3.69e-29 124
Msa0547430 AT1G59750.3 48.656 372 164 5 54 416 22 375 6.19e-117 368
Msa0547430 AT1G59750.3 53.636 110 45 1 645 748 522 631 3.69e-29 124
Msa0547430 AT5G37020.2 51.639 366 161 6 54 415 22 375 1.75e-111 357
Msa0547430 AT5G37020.2 50.725 69 32 2 659 726 705 772 3.04e-15 80.5
Msa0547430 AT3G61830.1 49.162 358 165 6 41 396 12 354 3.29e-111 351
Msa0547430 AT3G61830.1 40.800 125 72 2 624 748 455 577 2.99e-23 105
Msa0547430 AT5G37020.1 51.639 366 161 6 54 415 22 375 5.59e-111 357
Msa0547430 AT5G37020.1 46.667 90 46 2 659 747 705 793 7.09e-19 92.4
Msa0547430 AT2G33860.2 50.943 371 140 7 165 530 1 334 4.05e-110 343
Msa0547430 AT1G30330.3 51.467 375 148 9 54 415 25 378 9.08e-109 354
Msa0547430 AT1G30330.3 43.137 102 54 3 649 747 784 884 2.71e-19 93.6
Msa0547430 AT1G30330.2 51.467 375 148 9 54 415 25 378 9.08e-109 354
Msa0547430 AT1G30330.2 43.137 102 54 3 649 747 784 884 2.71e-19 93.6
Msa0547430 AT1G30330.1 51.467 375 148 9 54 415 23 376 9.88e-109 354
Msa0547430 AT1G30330.1 43.137 102 54 3 649 747 782 882 2.66e-19 94.0
Msa0547430 AT2G46530.1 46.486 370 177 7 52 416 19 372 4.50e-108 343
Msa0547430 AT2G46530.1 41.497 147 52 2 634 747 432 577 6.51e-27 117
Msa0547430 AT2G46530.3 46.486 370 177 7 52 416 40 393 1.06e-107 343
Msa0547430 AT2G46530.3 40.000 155 59 2 634 755 453 606 8.30e-27 116
Msa0547430 AT4G23980.1 47.028 387 177 10 52 430 10 376 4.55e-104 334
Msa0547430 AT4G23980.1 51.376 109 51 2 643 750 506 613 5.40e-27 117
Msa0547430 AT4G23980.2 47.721 373 167 10 52 416 10 362 1.19e-103 333
Msa0547430 AT4G23980.2 51.376 109 51 2 643 750 504 611 5.21e-27 117
Msa0547430 AT1G19850.2 49.582 359 164 8 41 396 33 377 1.01e-101 334
Msa0547430 AT1G19850.2 43.564 101 55 2 649 748 772 871 1.40e-17 88.2
Msa0547430 AT1G19850.1 49.582 359 164 8 41 396 44 388 1.32e-101 334
Msa0547430 AT1G19850.1 43.564 101 55 2 649 748 783 882 1.55e-17 88.2
Msa0547430 AT1G19220.1 50.725 345 156 4 54 396 23 355 1.38e-97 327
Msa0547430 AT1G19220.1 47.423 97 49 2 654 749 953 1048 2.39e-21 100
Msa0547430 AT3G61830.2 50.825 303 134 5 94 396 16 303 4.16e-97 313
Msa0547430 AT3G61830.2 40.800 125 72 2 624 748 404 526 2.01e-23 105
Msa0547430 AT5G20730.2 50.144 347 155 5 54 396 24 356 6.13e-95 321
Msa0547430 AT5G20730.2 45.361 97 51 2 654 749 1032 1127 3.72e-20 96.7
Msa0547430 AT5G20730.3 50.000 348 155 6 54 396 24 357 2.26e-93 317
Msa0547430 AT5G20730.3 45.361 97 51 2 654 749 1033 1128 3.30e-20 97.1
Msa0547430 AT5G20730.1 50.000 348 155 6 54 396 24 357 3.23e-93 316
Msa0547430 AT5G20730.1 45.361 97 51 2 654 749 1033 1128 3.85e-20 96.7
Msa0547430 AT1G35540.1 40.209 383 207 7 49 428 22 385 8.54e-88 290
Msa0547430 AT1G35540.1 50.515 97 47 1 651 747 502 597 7.08e-24 107
Msa0547430 AT1G34310.1 39.268 410 208 9 49 453 22 395 9.75e-87 286
Msa0547430 AT1G34310.1 46.847 111 56 2 633 741 483 592 5.10e-22 101
Msa0547430 AT1G34170.1 41.257 366 193 8 52 414 23 369 8.78e-86 281
Msa0547430 AT5G37020.3 54.023 261 118 2 156 415 21 280 6.31e-85 285
Msa0547430 AT5G37020.3 46.667 90 46 2 659 747 610 698 5.08e-19 92.4
Msa0547430 AT1G35240.1 41.547 349 185 5 49 396 22 352 1.51e-84 281
Msa0547430 AT1G35240.1 52.632 95 44 1 651 745 489 582 4.12e-23 105
Msa0547430 AT1G34410.1 39.840 374 194 7 49 420 22 366 5.29e-84 280
Msa0547430 AT1G34410.1 52.632 95 44 1 651 745 503 596 2.01e-23 106
Msa0547430 AT1G35520.1 40.270 370 198 7 49 416 22 370 8.31e-82 273
Msa0547430 AT1G35520.1 48.352 91 46 1 651 741 503 592 2.62e-21 99.4
Msa0547430 AT2G46530.2 49.042 261 127 4 158 416 29 285 1.19e-80 268
Msa0547430 AT2G46530.2 41.497 147 52 2 634 747 345 490 2.81e-27 117
Msa0547430 AT2G28350.2 40.547 402 185 8 54 413 10 399 1.43e-80 272
Msa0547430 AT2G28350.1 40.547 402 185 8 54 413 10 399 1.86e-80 272
Msa0547430 AT4G30080.1 39.295 397 196 6 54 416 19 404 1.93e-79 269
Msa0547430 AT1G34390.1 40.331 362 190 7 49 404 22 363 4.57e-79 266
Msa0547430 AT1G34390.1 48.352 91 46 1 651 741 501 590 1.26e-20 97.4
Msa0547430 AT1G34170.2 38.798 366 176 8 52 414 23 343 1.68e-73 248
Msa0547430 AT1G34170.3 38.798 366 176 8 52 414 23 343 1.76e-72 247
Msa0547430 AT1G34170.3 32.143 196 98 5 559 747 353 520 2.78e-20 95.9
Msa0547430 AT1G77850.2 32.581 399 217 8 55 418 20 401 5.98e-56 202
Msa0547430 AT1G77850.1 32.581 399 217 8 55 418 20 401 8.43e-56 202
Msa0547430 AT1G43950.1 42.009 219 107 5 49 265 22 222 4.46e-48 170
Msa0547430 AT2G46870.1 33.133 166 89 6 145 307 14 160 1.05e-11 67.4
Msa0547430 AT4G01500.1 38.043 92 54 1 164 255 34 122 2.29e-11 66.6
Msa0547430 AT1G01030.2 36.735 98 61 1 158 255 48 144 7.49e-11 65.1
Msa0547430 AT1G13260.1 35.088 114 70 2 154 263 174 287 8.43e-11 64.7
Msa0547430 AT1G01030.1 36.735 98 61 1 158 255 48 144 9.65e-11 64.7

Find 231 sgRNAs with CRISPR-Local

Find 431 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTTAATTGTCAATCTTTC+TGG 0.096757 4_1:-40661271 None:intergenic
TTTCAGTTATGCAGGCTTTA+TGG 0.176843 4_1:+40659706 Msa0547430:CDS
GCAACAGATGCAAGGAAATT+TGG 0.179587 4_1:-40658357 None:intergenic
CATCTTCTCCACTTCTTCTT+TGG 0.185315 4_1:-40660989 None:intergenic
CTTCTTCTTTGGTATATATA+TGG 0.187674 4_1:-40660978 None:intergenic
TTGCTGTGTTCTGTATATTT+TGG 0.193174 4_1:-40660150 None:intergenic
TATAATTTGATGTTACATTT+TGG 0.197054 4_1:+40661199 Msa0547430:three_prime_UTR
ATCGTAAATTACCTTCTTTC+GGG 0.203391 4_1:-40658615 None:intergenic
TAGTTAGAGTCTAAAGTTTC+AGG 0.206625 4_1:+40661124 Msa0547430:exon
GGAAATTTGGATAACAATTC+TGG 0.218349 4_1:-40658344 None:intergenic
GGTATCTCCAATTGTTTAAA+AGG 0.223290 4_1:-40655790 None:intergenic
GTTTCTGCTTCTGCTTCATT+AGG 0.240616 4_1:+40660031 Msa0547430:CDS
TGTAAACTGAAATCCCTTTC+AGG 0.261732 4_1:+40659770 Msa0547430:CDS
TTTATGAATGTGTTTGGTTT+GGG 0.263235 4_1:+40661423 Msa0547430:three_prime_UTR
TTACATTACCTCTATAAATA+TGG 0.265982 4_1:-40657504 None:intergenic
GACATTATCACTCATGAAAT+TGG 0.276302 4_1:-40659909 None:intergenic
TATCGTAAATTACCTTCTTT+CGG 0.280206 4_1:-40658616 None:intergenic
GTTTAACACGCCATCGATAT+TGG 0.282469 4_1:+40659934 Msa0547430:CDS
CTTCTTCTTATCTTGAACTA+TGG 0.284809 4_1:+40655671 Msa0547430:CDS
TCCTTCACATTGTTATCATT+TGG 0.290468 4_1:-40660073 None:intergenic
TGCCATAAGGAATGTGAAAA+AGG 0.290889 4_1:+40655577 Msa0547430:CDS
GCTAAACAAGTTAGCTTGAT+TGG 0.295750 4_1:-40659876 None:intergenic
GTACCTACAAATGGAGATAA+TGG 0.308535 4_1:+40655208 Msa0547430:five_prime_UTR
TCCGCGGTTTCTTCAGTCTT+GGG 0.308610 4_1:-40659105 None:intergenic
ACACAATTCTCAAGAGATAT+TGG 0.310800 4_1:-40661340 None:intergenic
TTTCTGCTTCTGCTTCATTA+GGG 0.316596 4_1:+40660032 Msa0547430:CDS
AATATCGATGGCGTGTTAAA+CGG 0.317228 4_1:-40659932 None:intergenic
GTTTGGTTTGGGGTGGAACT+TGG 0.317594 4_1:+40661434 Msa0547430:three_prime_UTR
AACCTGGCTGGTTGGTTACT+TGG 0.324654 4_1:-40659592 None:intergenic
GATTCAGGAAGACCGTTTCT+AGG 0.330741 4_1:-40658309 None:intergenic
GCAAATTCTTGCAAACTATT+CGG 0.333936 4_1:+40660100 Msa0547430:CDS
AGTGAACTGGAGAAACTATT+TGG 0.334062 4_1:+40660356 Msa0547430:CDS
TGGTTACCAACAATTGATTC+AGG 0.336823 4_1:-40658324 None:intergenic
TTTGAAGGTTCAATAATAAC+TGG 0.349549 4_1:-40661063 None:intergenic
GAAGTGGAGAAGATGACATT+TGG 0.355497 4_1:+40660997 Msa0547430:CDS
AAGTGGAGAAGATGACATTT+GGG 0.357385 4_1:+40660998 Msa0547430:CDS
TCCTGCAGCTTATGCTCATT+TGG 0.357673 4_1:-40660004 None:intergenic
AACCTCATCATTCTCCTTGT+TGG 0.359424 4_1:-40656138 None:intergenic
TGATTTCAACATTGGAGCTT+GGG 0.359640 4_1:+40659799 Msa0547430:CDS
GCTGAGCTAACTAGCTCAAA+AGG 0.362860 4_1:-40661229 None:intergenic
ATAGATGGCCTAAATCAAAA+TGG 0.363531 4_1:+40658757 Msa0547430:CDS
AGAAACAAAGACAGTGTTCA+TGG 0.366292 4_1:+40655507 Msa0547430:exon
ACCACAACATTTCCTTTCTT+AGG 0.367433 4_1:-40655724 None:intergenic
GTCCGCGGTTTCTTCAGTCT+TGG 0.371861 4_1:-40659106 None:intergenic
AGAAAAGAAGTTGGAAGATC+TGG 0.374337 4_1:+40659968 Msa0547430:CDS
ATATCGATGGCGTGTTAAAC+GGG 0.378084 4_1:-40659931 None:intergenic
CTCCACACCATGCAGGTCTT+TGG 0.378354 4_1:-40657470 None:intergenic
CATCAAAACCTTGCATCAAC+TGG 0.379162 4_1:+40659638 Msa0547430:CDS
GAAAACATGAAACATGCTTT+TGG 0.379376 4_1:-40658394 None:intergenic
ATCAAAATGGAGGTGCTTGA+TGG 0.392147 4_1:+40658770 Msa0547430:CDS
ATTCCATTATCTCCATTTGT+AGG 0.392289 4_1:-40655211 None:intergenic
TCTTGACCTTGCAAGACCTT+TGG 0.393008 4_1:-40659533 None:intergenic
AAAGAAGTTGAGGAATTAGA+AGG 0.393061 4_1:+40656963 Msa0547430:CDS
ATTCAAAATGAGAATTGAAA+TGG 0.396328 4_1:+40658584 Msa0547430:CDS
CTTCTTAGAGATTCTGATAA+GGG 0.397025 4_1:+40660389 Msa0547430:CDS
GTGATGCAGTGCTCTTTCTA+AGG 0.401447 4_1:+40657670 Msa0547430:CDS
GTCTTCGTAGGGGTGAGAAC+GGG 0.408385 4_1:+40658253 Msa0547430:intron
CTATTCGGCTTTCCTTTGTC+TGG 0.408734 4_1:+40660115 Msa0547430:CDS
TTTGATTTAGGCCATCTATA+GGG 0.413502 4_1:-40658753 None:intergenic
CCAACTGAGGAAGACTTTGA+AGG 0.413561 4_1:-40661078 None:intergenic
CTGATTTCAACATTGGAGCT+TGG 0.418139 4_1:+40659798 Msa0547430:CDS
GTTAATCCTTTCAGTTATGC+AGG 0.425087 4_1:+40659698 Msa0547430:CDS
GGAGATGAAGAGGGAGATGG+AGG 0.430363 4_1:+40656984 Msa0547430:CDS
CACTAAATAAGTGCTAATCT+TGG 0.432259 4_1:+40661294 Msa0547430:three_prime_UTR
ATATACAGAACACAGCAAAA+AGG 0.434443 4_1:+40660155 Msa0547430:CDS
ACTACTGTTGGAGAATAATC+TGG 0.435153 4_1:-40661105 None:intergenic
AGCAGGAATCAGTGGAATGA+TGG 0.437544 4_1:+40659487 Msa0547430:intron
TCAGTTGGCAGGGATGCATA+TGG 0.437567 4_1:+40656935 Msa0547430:intron
TGGGGAAGACTGAATGCTTA+GGG 0.438392 4_1:-40659086 None:intergenic
CAGTGGAATGATGGGCTTTG+AGG 0.440411 4_1:+40659496 Msa0547430:CDS
CTTACTTCACTTCCTAAGAA+AGG 0.441936 4_1:+40655712 Msa0547430:CDS
GGAAAAGCTGATTTCAACAT+TGG 0.443523 4_1:+40659791 Msa0547430:CDS
AATTGTGTACTCTAGAATTA+TGG 0.444292 4_1:+40661355 Msa0547430:three_prime_UTR
CTCTTCTATGTACCTACAAA+TGG 0.447258 4_1:+40655199 Msa0547430:five_prime_UTR
GTGACATAAAACAGGTAAGA+TGG 0.447623 4_1:+40658990 Msa0547430:intron
TGTGGCTGAAGATCATAGTT+TGG 0.447773 4_1:-40655811 None:intergenic
TGATGATACTCATAGCTGTT+TGG 0.448093 4_1:+40661032 Msa0547430:CDS
CAATGATCTTCTGAGTGAAC+TGG 0.449039 4_1:+40660343 Msa0547430:CDS
GAACTATGGCATGCTTGTGC+TGG 0.452079 4_1:+40655685 Msa0547430:CDS
AACACGCCATCGATATTGGC+AGG 0.456465 4_1:+40659938 Msa0547430:CDS
CTTGAAGATGAACAAGTTGA+AGG 0.457374 4_1:-40655628 None:intergenic
GGTCTTCCTGAATCAATTGT+TGG 0.457519 4_1:+40658318 Msa0547430:CDS
TACTCATAGCTGTTTGGATC+AGG 0.457597 4_1:+40661038 Msa0547430:CDS
CTTTAGACTCTAACTACTGT+TGG 0.457649 4_1:-40661117 None:intergenic
TTGGGGAAGACTGAATGCTT+AGG 0.458895 4_1:-40659087 None:intergenic
TGTTAAAAGCATCAAGAATC+CGG 0.462420 4_1:+40658545 Msa0547430:CDS
ACGACTTGGATCCCTATAGA+TGG 0.463477 4_1:+40658742 Msa0547430:CDS
GAAGGAGATGAAGAGGGAGA+TGG 0.463926 4_1:+40656981 Msa0547430:CDS
AGTTAGAGTCTAAAGTTTCA+GGG 0.465120 4_1:+40661125 Msa0547430:exon
GGTTCACAAGCAAGGAAGCT+TGG 0.465769 4_1:+40660283 Msa0547430:intron
GGAATTAGAAGGAGATGAAG+AGG 0.472885 4_1:+40656974 Msa0547430:CDS
TTCTTAGGAAGTGAAGTAAG+AGG 0.473214 4_1:-40655709 None:intergenic
ACTTCTTAGAGATTCTGATA+AGG 0.476305 4_1:+40660388 Msa0547430:CDS
CACAAGCAAGGAAGCTTGGT+TGG 0.477052 4_1:+40660287 Msa0547430:CDS
AGGCGGCATCTACTCACAAC+TGG 0.483600 4_1:+40657609 Msa0547430:CDS
GAAACCGCGGACCGGTCTAC+TGG 0.483892 4_1:+40659117 Msa0547430:CDS
TGTAGTAGTGGTATGTTGAT+TGG 0.485540 4_1:+40658714 Msa0547430:CDS
AAACATGCAGATTGAAAACT+AGG 0.485809 4_1:-40659830 None:intergenic
TGGAAAGTAACAACTTTCCA+AGG 0.487409 4_1:+40659726 Msa0547430:CDS
AAATTTCGCCATATTTATAG+AGG 0.488170 4_1:+40657496 Msa0547430:CDS
TCTTGACCTTGCAAGACCCT+TGG 0.488979 4_1:-40659743 None:intergenic
TTTCTTGAGAGAGTCTCAAA+TGG 0.494706 4_1:-40655489 None:intergenic
TTGCAAGGTCAAGAAAATAC+AGG 0.496208 4_1:+40659542 Msa0547430:CDS
TGATAACAATGTGAAGGAAA+AGG 0.496252 4_1:+40660078 Msa0547430:CDS
CCTTCAAAGTCTTCCTCAGT+TGG 0.496667 4_1:+40661078 Msa0547430:CDS
GAAGAATGCATTGTGCCATA+AGG 0.497724 4_1:+40655564 Msa0547430:CDS
TGAATGTGTTTGGTTTGGGG+TGG 0.498907 4_1:+40661427 Msa0547430:three_prime_UTR
GTCTCTGATACCAGCACTCA+TGG 0.499971 4_1:+40657053 Msa0547430:CDS
GCTTTGTCAATATCTCCATA+AGG 0.501081 4_1:-40659854 None:intergenic
AATCTTGTCCCTATGGTCAC+CGG 0.501580 4_1:-40658564 None:intergenic
GGGAGCATTAGAAAAGAAGT+TGG 0.502783 4_1:+40659959 Msa0547430:CDS
CATACCAGTGATGAGGTGAT+TGG 0.505946 4_1:-40659149 None:intergenic
GAGAACGGGGAGCTGAGATT+AGG 0.506066 4_1:+40658267 Msa0547430:CDS
TGCAGATTGAAAACTAGGCT+TGG 0.506257 4_1:-40659825 None:intergenic
TATATATACCAAAGAAGAAG+TGG 0.514232 4_1:+40660981 Msa0547430:CDS
TGCTCAACTCAAAACCTGGC+TGG 0.515074 4_1:-40659604 None:intergenic
CCGCGGTTTCTTCAGTCTTG+GGG 0.515903 4_1:-40659104 None:intergenic
ATTCAGTACTCACAAGTAGC+TGG 0.528164 4_1:-40655858 None:intergenic
TACTCTGCTACCTCAGGCTG+AGG 0.529145 4_1:+40656172 Msa0547430:CDS
GAATTAGAAGGAGATGAAGA+GGG 0.531417 4_1:+40656975 Msa0547430:CDS
TAAGTGCTAATCTTGGAAGT+TGG 0.531545 4_1:+40661301 Msa0547430:three_prime_UTR
TCCAAATGAGCATAAGCTGC+AGG 0.532461 4_1:+40660003 Msa0547430:CDS
ACAGCTATGAGTATCATCAT+TGG 0.534267 4_1:-40661028 None:intergenic
GGCATCTACTCACAACTGGC+TGG 0.536364 4_1:+40657613 Msa0547430:CDS
AGAGAATCCACCATGAGTGC+TGG 0.537303 4_1:-40657063 None:intergenic
TGAGAATGACATAATGGTTG+TGG 0.539248 4_1:+40660436 Msa0547430:CDS
TCAAGAATCCGGTGACCATA+GGG 0.539781 4_1:+40658556 Msa0547430:CDS
CAACTCAAAACCTGGCTGGT+TGG 0.540058 4_1:-40659600 None:intergenic
TGAATGCTTAGGGGAGGCTG+AGG 0.543172 4_1:-40659076 None:intergenic
GAAAGATTTCATACCAAAGG+AGG 0.544194 4_1:-40657116 None:intergenic
CTATCTTGCAGGTGTAGTAG+TGG 0.544633 4_1:+40658702 Msa0547430:intron
TCACCCAATCACCTCATCAC+TGG 0.544643 4_1:+40659145 Msa0547430:CDS
TGACATAAAACAGGTAAGAT+GGG 0.544673 4_1:+40658991 Msa0547430:intron
ATCAAGACCGTGTATCGCCA+TGG 0.545010 4_1:+40659035 Msa0547430:CDS
TTCCTACTCCAGTTGATGCA+AGG 0.545368 4_1:-40659646 None:intergenic
TTAGAGATTCTGATAAGGGA+TGG 0.545399 4_1:+40660393 Msa0547430:CDS
GCAGGAATCAGTGGAATGAT+GGG 0.546322 4_1:+40659488 Msa0547430:intron
TTCTGCTTCTGCTTCATTAG+GGG 0.547616 4_1:+40660033 Msa0547430:CDS
GCTCAACCTCGAGAGGTCAA+TGG 0.548222 4_1:-40660315 None:intergenic
TGTCTTCGTAGGGGTGAGAA+CGG 0.549342 4_1:+40658252 Msa0547430:intron
TTATGAATGTGTTTGGTTTG+GGG 0.550292 4_1:+40661424 Msa0547430:three_prime_UTR
TTAACACTCATAAGCTCAGA+AGG 0.550306 4_1:-40659680 None:intergenic
CGATCTCCCATGGCGATACA+CGG 0.550741 4_1:-40659042 None:intergenic
GGGTTGTCTTGAGTTTGTGT+TGG 0.550789 4_1:+40661145 Msa0547430:three_prime_UTR
TTTGGCAACAAGCTCTTGAG+AGG 0.551407 4_1:-40657452 None:intergenic
GCAGCTTATGCTCATTTGGA+AGG 0.553078 4_1:-40660000 None:intergenic
TCTAAACAATGAAGTGATTG+AGG 0.553452 4_1:+40655537 Msa0547430:CDS
CTGAGCTAACTAGCTCAAAA+GGG 0.554241 4_1:-40661228 None:intergenic
TGACAGTGAGAATGACATAA+TGG 0.554268 4_1:+40660430 Msa0547430:CDS
TGGACGAATCACCCGAAAGA+AGG 0.555281 4_1:+40658604 Msa0547430:CDS
AAGAAGAATACTTACTGCCA+TGG 0.559448 4_1:-40660467 None:intergenic
AATTGTTCTAAGTGACCTTG+TGG 0.563871 4_1:-40655754 None:intergenic
ATCAAGAATCCGGTGACCAT+AGG 0.565374 4_1:+40658555 Msa0547430:CDS
GAGAATGACATAATGGTTGT+GGG 0.567615 4_1:+40660437 Msa0547430:CDS
GGGTGAGGCAACCAGTAGAC+CGG 0.570644 4_1:-40659128 None:intergenic
ACAAGTTACTCTGCTACCTC+AGG 0.572482 4_1:+40656166 Msa0547430:CDS
AAAACAGGTAAGATGGGATG+AGG 0.572740 4_1:+40658997 Msa0547430:intron
GAGATGAAGAGGGAGATGGA+GGG 0.575170 4_1:+40656985 Msa0547430:CDS
ATAGGAAGCACAGAAACAAA+AGG 0.575186 4_1:-40655152 None:intergenic
ATACCAGTGATGAGGTGATT+GGG 0.578406 4_1:-40659148 None:intergenic
ATAAAGCCTGCATAACTGAA+AGG 0.578447 4_1:-40659704 None:intergenic
TTCACTTTATAGAATCCACT+TGG 0.578543 4_1:+40655403 Msa0547430:five_prime_UTR
GATTTCAACATTGGAGCTTG+GGG 0.581471 4_1:+40659800 Msa0547430:CDS
TCCAAATGATAACAATGTGA+AGG 0.589769 4_1:+40660072 Msa0547430:CDS
TTTATGGCAGCAGGAATCAG+TGG 0.590392 4_1:+40659479 Msa0547430:intron
TAAATGAAGGTTCACAAGCA+AGG 0.591824 4_1:+40660275 Msa0547430:intron
CATTCTCACTGTCAGTGTAG+AGG 0.593368 4_1:-40660421 None:intergenic
CCAAAAGTCACAACCCACAT+TGG 0.594115 4_1:+40655120 None:intergenic
AGAGCTGTTAGACCTAGAAA+CGG 0.595218 4_1:+40658297 Msa0547430:CDS
GACCAAGTAACCAACCAGCC+AGG 0.595723 4_1:+40659590 Msa0547430:CDS
TGTGTACTCTAGAATTATGG+TGG 0.595811 4_1:+40661358 Msa0547430:three_prime_UTR
ATTTCCACTCCACACCATGC+AGG 0.596067 4_1:-40657477 None:intergenic
AACTTTCCAAGGGTCTTGCA+AGG 0.597137 4_1:+40659737 Msa0547430:CDS
GAAGAGCCATTGACCTCTCG+AGG 0.597458 4_1:+40660309 Msa0547430:CDS
TATGGAAGGAAAAGAAGTTG+AGG 0.598443 4_1:+40656953 Msa0547430:CDS
ACTGGAGAAACTATTTGGCA+TGG 0.598525 4_1:+40660361 Msa0547430:CDS
AGACTGAAGAAACCGCGGAC+CGG 0.598571 4_1:+40659109 Msa0547430:CDS
CTACTAGGTTCGCCAGACAA+AGG 0.599260 4_1:-40660127 None:intergenic
GAGAAACTATTTGGCATGGA+AGG 0.600086 4_1:+40660365 Msa0547430:CDS
ACAATTTGGTAAATGCACTC+TGG 0.600662 4_1:+40661510 Msa0547430:three_prime_UTR
TCAAGACCGTGTATCGCCAT+GGG 0.601110 4_1:+40659036 Msa0547430:CDS
TCTTAGGAAGTGAAGTAAGA+GGG 0.602953 4_1:-40655708 None:intergenic
CTAATTTGTCAGGTCAGCCA+AGG 0.606026 4_1:+40657589 Msa0547430:intron
AACCTTGCATCAACTGGAGT+AGG 0.606458 4_1:+40659644 Msa0547430:CDS
GTTGTGAGTAGATGCCGCCT+TGG 0.606611 4_1:-40657606 None:intergenic
GTGTCTTGCAGAACATGTGA+GGG 0.607798 4_1:-40657025 None:intergenic
TAGCATTTGCAACAGATGCA+AGG 0.608463 4_1:-40658365 None:intergenic
ATGCTCCCTGCCAATATCGA+TGG 0.612198 4_1:-40659944 None:intergenic
ATTTGTAGGTACATAGAAGA+GGG 0.613006 4_1:-40655197 None:intergenic
GTTGATTGGAATAAACGACT+TGG 0.614135 4_1:+40658728 Msa0547430:CDS
GAAGTGCTCAACTCAAAACC+TGG 0.615230 4_1:-40659608 None:intergenic
AGTGTCTTGCAGAACATGTG+AGG 0.616842 4_1:-40657026 None:intergenic
GGAAAGTAACAACTTTCCAA+GGG 0.618100 4_1:+40659727 Msa0547430:CDS
AGATCACCAAAGGTCTTGCA+AGG 0.621574 4_1:+40659527 Msa0547430:CDS
GAAGACAGAGACAATTGCAT+AGG 0.621616 4_1:-40655170 None:intergenic
AAAGGCAAGTAAAGCCAATG+TGG 0.622004 4_1:-40655134 None:intergenic
ATAATCTGGCTGACCAACTG+AGG 0.623428 4_1:-40661091 None:intergenic
CATTTGTAGGTACATAGAAG+AGG 0.624421 4_1:-40655198 None:intergenic
AACACTCATAAGCTCAGAAG+GGG 0.624782 4_1:-40659678 None:intergenic
AGTGATGAGGTGATTGGGTG+AGG 0.628578 4_1:-40659143 None:intergenic
AAGACCTGCATGGTGTGGAG+TGG 0.629896 4_1:+40657473 Msa0547430:CDS
TAACACTCATAAGCTCAGAA+GGG 0.629971 4_1:-40659679 None:intergenic
ACACGCCATCGATATTGGCA+GGG 0.630916 4_1:+40659939 Msa0547430:CDS
GAGATTCTGATAAGGGATGG+AGG 0.631623 4_1:+40660396 Msa0547430:CDS
TTTCATATTTCATGTCATGG+TGG 0.631774 4_1:+40661382 Msa0547430:three_prime_UTR
TGCCAAAGACCTGCATGGTG+TGG 0.632330 4_1:+40657468 Msa0547430:CDS
TTGGCAACAAGCTCTTGAGA+GGG 0.634142 4_1:-40657451 None:intergenic
TCTTCGTAGGGGTGAGAACG+GGG 0.634155 4_1:+40658254 Msa0547430:intron
GAAGAAATATCGATCTCCCA+TGG 0.639630 4_1:-40659052 None:intergenic
GGGGAAGACTGAATGCTTAG+GGG 0.643082 4_1:-40659085 None:intergenic
TTGGCAGGGATGCATATGGA+AGG 0.645626 4_1:+40656939 Msa0547430:CDS
TCCTAAGAAAGGAAATGTTG+TGG 0.646376 4_1:+40655723 Msa0547430:CDS
AGATAAGAAGAAGAAACAAG+TGG 0.649698 4_1:-40655661 None:intergenic
AAGGCAAGTAAAGCCAATGT+GGG 0.652062 4_1:-40655133 None:intergenic
CAGGACTCATACCAGTGATG+AGG 0.658333 4_1:-40659156 None:intergenic
GATGGCCTAAATCAAAATGG+AGG 0.658795 4_1:+40658760 Msa0547430:CDS
GGAGTCAGTAAGATCACCAA+AGG 0.663614 4_1:+40659517 Msa0547430:CDS
ACAACCCTGCAAAAGATCTG+TGG 0.666650 4_1:-40655829 None:intergenic
TGTAGCCGCTCAACCTCGAG+AGG 0.671618 4_1:-40660322 None:intergenic
CAATCTTCAGCAGCTCTGCG+AGG 0.672569 4_1:-40657089 None:intergenic
GAAGACTGAATGCTTAGGGG+AGG 0.675841 4_1:-40659082 None:intergenic
ATTGACCTCTCGAGGTTGAG+CGG 0.677998 4_1:+40660317 Msa0547430:CDS
GAATGACATAATGGTTGTGG+GGG 0.679524 4_1:+40660439 Msa0547430:CDS
AGAATGACATAATGGTTGTG+GGG 0.682622 4_1:+40660438 Msa0547430:CDS
TCTGATACCAGCACTCATGG+TGG 0.683675 4_1:+40657056 Msa0547430:CDS
ATTTGTCAGGTCAGCCAAGG+CGG 0.683923 4_1:+40657592 Msa0547430:intron
GGCCAACAAGGAGAATGATG+AGG 0.688468 4_1:+40656136 Msa0547430:intron
CCCCAAGACTGAAGAAACCG+CGG 0.689701 4_1:+40659104 Msa0547430:CDS
GCAACCAGTAGACCGGTCCG+CGG 0.697161 4_1:-40659121 None:intergenic
CTTGTTGCCAAAGACCTGCA+TGG 0.711328 4_1:+40657463 Msa0547430:CDS
TGTCTTGCAGAACATGTGAG+GGG 0.734062 4_1:-40657024 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTAAAGATAGAAAAAA+GGG - chr4_1:40655434-40655453 None:intergenic 10.0%
!! TTTATTTAAAGATAGAAAAA+AGG - chr4_1:40655435-40655454 None:intergenic 10.0%
!! ATATAAATCAATAAAATCAT+TGG + chr4_1:40658467-40658486 Msa0547430:intron 10.0%
!!! AGATTTTTTCAAATTTTTAG+CGG + chr4_1:40656016-40656035 Msa0547430:intron 15.0%
!!! AAATTATTGTTTCTTTTAAC+AGG + chr4_1:40656115-40656134 Msa0547430:intron 15.0%
!!! TTTTTTATGTTCTTTATGTT+TGG + chr4_1:40656210-40656229 Msa0547430:intron 15.0%
!!! CAAAGAAAAAATAACTTTTT+AGG + chr4_1:40656373-40656392 Msa0547430:intron 15.0%
!! CTTTGAATAATTTATGTATT+TGG + chr4_1:40656398-40656417 Msa0547430:intron 15.0%
!!! TTTAGATTTTGATTTTTTTG+TGG + chr4_1:40658442-40658461 Msa0547430:intron 15.0%
!!! GAAATATTTTAATGATGAAA+CGG + chr4_1:40658947-40658966 Msa0547430:intron 15.0%
!! AATACATTCAATAGATAATA+GGG - chr4_1:40659227-40659246 None:intergenic 15.0%
!! ATATAATATACACTAAATGA+AGG + chr4_1:40660262-40660281 Msa0547430:intron 15.0%
!!! TATAATTTGATGTTACATTT+TGG + chr4_1:40661199-40661218 Msa0547430:three_prime_UTR 15.0%
!!! AATATTTTTATGAATGTGTT+TGG + chr4_1:40661417-40661436 Msa0547430:three_prime_UTR 15.0%
!! TAAAGATAAGAAAAAAAGGA+AGG - chr4_1:40655297-40655316 None:intergenic 20.0%
!!! TTTTTTTCATATTGCAAACA+AGG - chr4_1:40655322-40655341 None:intergenic 20.0%
!!! TTTTTCTCCTTTTAAACAAT+TGG + chr4_1:40655783-40655802 Msa0547430:CDS 20.0%
!!! TGAATTCATGTAACATATTT+TGG + chr4_1:40656084-40656103 Msa0547430:intron 20.0%
!! CAATAGTAAATAAACATGTT+TGG - chr4_1:40656245-40656264 None:intergenic 20.0%
!!! TTTGAAGTTTGATAAGTTTA+AGG + chr4_1:40657151-40657170 Msa0547430:intron 20.0%
!! TTGAAGTTTGATAAGTTTAA+GGG + chr4_1:40657152-40657171 Msa0547430:intron 20.0%
!! TTACATTACCTCTATAAATA+TGG - chr4_1:40657507-40657526 None:intergenic 20.0%
!! ATATAAATAGAAATTTCTCC+AGG - chr4_1:40657710-40657729 None:intergenic 20.0%
!! ATTATTGGAAGAATGTTATT+TGG - chr4_1:40657810-40657829 None:intergenic 20.0%
!!! GTTACTTTGTACTAAATTAT+TGG - chr4_1:40657825-40657844 None:intergenic 20.0%
!!! ATCTGAGTAATGAATTTTTT+TGG + chr4_1:40657968-40657987 Msa0547430:intron 20.0%
!!! AGTAATGAATTTTTTTGGTT+TGG + chr4_1:40657973-40657992 Msa0547430:intron 20.0%
!! TTCTTATTCACAATAAGTAA+TGG - chr4_1:40658070-40658089 None:intergenic 20.0%
!!! CTTTTAACATATTTTTGGTA+CGG - chr4_1:40658534-40658553 None:intergenic 20.0%
!!! TGATGCTTTTAACATATTTT+TGG - chr4_1:40658539-40658558 None:intergenic 20.0%
!! ATTCAAAATGAGAATTGAAA+TGG + chr4_1:40658584-40658603 Msa0547430:CDS 20.0%
!! TATAATTGATGAGTTATGAT+TGG - chr4_1:40658903-40658922 None:intergenic 20.0%
!! GAATACATTCAATAGATAAT+AGG - chr4_1:40659228-40659247 None:intergenic 20.0%
!!! CACTTTTTTTATTGTATGTT+TGG + chr4_1:40660585-40660604 Msa0547430:intron 20.0%
!!! TTCTTTTATCACAATTAAGT+TGG + chr4_1:40660743-40660762 Msa0547430:intron 20.0%
!!! TCTTTTATCACAATTAAGTT+GGG + chr4_1:40660744-40660763 Msa0547430:intron 20.0%
!! TTTAGAAAAAATGAATGTAG+AGG + chr4_1:40661464-40661483 Msa0547430:three_prime_UTR 20.0%
!!! GGAACATTTAAAGTATTTTA+AGG + chr4_1:40661485-40661504 Msa0547430:three_prime_UTR 20.0%
! GGCTTAAAGATAAGAAAAAA+AGG - chr4_1:40655301-40655320 None:intergenic 25.0%
! GTATAGTATCATGAAAAATG+AGG - chr4_1:40655362-40655381 None:intergenic 25.0%
! AAGTGAAATTCAAAAAGTTG+AGG - chr4_1:40655390-40655409 None:intergenic 25.0%
!!! GTTTGATCATTTTTCAATTG+TGG + chr4_1:40655455-40655474 Msa0547430:five_prime_UTR 25.0%
! TTCAGTGTAATTATATGTGT+CGG - chr4_1:40655991-40656010 None:intergenic 25.0%
! TCAAATTGTGTGTCAAAATA+TGG - chr4_1:40656283-40656302 None:intergenic 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG + chr4_1:40656474-40656493 Msa0547430:intron 25.0%
! CAACTAATGGTTAATTAACA+AGG - chr4_1:40656611-40656630 None:intergenic 25.0%
! GATTAACTACATTCAACTAA+TGG - chr4_1:40656624-40656643 None:intergenic 25.0%
! TAGTATAGTTAGTATTACAC+TGG - chr4_1:40656836-40656855 None:intergenic 25.0%
! GTATTCAAAGTTACTCAAAA+AGG - chr4_1:40656897-40656916 None:intergenic 25.0%
! TTTGAGTAACTTTGAATACA+TGG + chr4_1:40656898-40656917 Msa0547430:intron 25.0%
!!! ATGTCACAAGCTTTTTTAAT+AGG - chr4_1:40657244-40657263 None:intergenic 25.0%
! GTTATTTATATAAACTAGCC+TGG - chr4_1:40657304-40657323 None:intergenic 25.0%
!! AAAAGCTTTTAATCCAAACA+AGG + chr4_1:40657360-40657379 Msa0547430:intron 25.0%
! AAATTTCGCCATATTTATAG+AGG + chr4_1:40657496-40657515 Msa0547430:CDS 25.0%
!! AACCAAAAAAATCTTGTTTC+TGG + chr4_1:40657648-40657667 Msa0547430:CDS 25.0%
! TTCAAAGTAGTAAACAATCA+AGG - chr4_1:40657758-40657777 None:intergenic 25.0%
! AGATATAAAGACATAGTGTA+AGG - chr4_1:40657952-40657971 None:intergenic 25.0%
!!! TAATAAGCTTTGAATGTCAA+TGG + chr4_1:40658138-40658157 Msa0547430:intron 25.0%
! TTAAAAGATACTTGCATGAT+AGG - chr4_1:40658214-40658233 None:intergenic 25.0%
! TATCGTAAATTACCTTCTTT+CGG - chr4_1:40658619-40658638 None:intergenic 25.0%
! AACTCATCAATTATATGACA+AGG + chr4_1:40658908-40658927 Msa0547430:intron 25.0%
! TATCTATTGAATGTATTCGT+AGG + chr4_1:40659230-40659249 Msa0547430:intron 25.0%
!! GACTGTGTTTATAAATTTTG+GGG - chr4_1:40659428-40659447 None:intergenic 25.0%
!! GGACTGTGTTTATAAATTTT+GGG - chr4_1:40659429-40659448 None:intergenic 25.0%
!! AGGACTGTGTTTATAAATTT+TGG - chr4_1:40659430-40659449 None:intergenic 25.0%
!! AACAAAGAAAGAGTATGATT+AGG - chr4_1:40659456-40659475 None:intergenic 25.0%
!! CTCTTTCTTTGTTTCATTTA+TGG + chr4_1:40659463-40659482 Msa0547430:intron 25.0%
!! ACATGTACTGGTATAATATA+AGG + chr4_1:40660546-40660565 Msa0547430:intron 25.0%
!!! CTTTTATCACAATTAAGTTG+GGG + chr4_1:40660745-40660764 Msa0547430:intron 25.0%
! GAAAACTTAAATACCTTGTT+TGG - chr4_1:40660909-40660928 None:intergenic 25.0%
! CTTCTTCTTTGGTATATATA+TGG - chr4_1:40660981-40661000 None:intergenic 25.0%
! TATATATACCAAAGAAGAAG+TGG + chr4_1:40660981-40661000 Msa0547430:CDS 25.0%
! TTTGAAGGTTCAATAATAAC+TGG - chr4_1:40661066-40661085 None:intergenic 25.0%
!!! AATTGTGTACTCTAGAATTA+TGG + chr4_1:40661355-40661374 Msa0547430:three_prime_UTR 25.0%
!! TTTTATGAATGTGTTTGGTT+TGG + chr4_1:40661422-40661441 Msa0547430:three_prime_UTR 25.0%
!! TTTATGAATGTGTTTGGTTT+GGG + chr4_1:40661423-40661442 Msa0547430:three_prime_UTR 25.0%
!!! AGTATTTTAAGGTGACAATT+TGG + chr4_1:40661496-40661515 Msa0547430:three_prime_UTR 25.0%
ATTTGTAGGTACATAGAAGA+GGG - chr4_1:40655200-40655219 None:intergenic 30.0%
ATTCCATTATCTCCATTTGT+AGG - chr4_1:40655214-40655233 None:intergenic 30.0%
AATTCAAAAAGTTGAGGCTA+TGG - chr4_1:40655384-40655403 None:intergenic 30.0%
TTCACTTTATAGAATCCACT+TGG + chr4_1:40655403-40655422 Msa0547430:five_prime_UTR 30.0%
TCTAAACAATGAAGTGATTG+AGG + chr4_1:40655537-40655556 Msa0547430:CDS 30.0%
!! AACCTTTTTCACATTCCTTA+TGG - chr4_1:40655582-40655601 None:intergenic 30.0%
AGATAAGAAGAAGAAACAAG+TGG - chr4_1:40655664-40655683 None:intergenic 30.0%
CTTCTTCTTATCTTGAACTA+TGG + chr4_1:40655671-40655690 Msa0547430:CDS 30.0%
GGTATCTCCAATTGTTTAAA+AGG - chr4_1:40655793-40655812 None:intergenic 30.0%
!!! TTTCAAATTTTTAGCGGTGT+CGG + chr4_1:40656022-40656041 Msa0547430:intron 30.0%
GATTAACTACTTTCAGTAGA+TGG + chr4_1:40656317-40656336 Msa0547430:intron 30.0%
TTCACTTAACACAACTAACT+AGG - chr4_1:40656569-40656588 None:intergenic 30.0%
AGTTAGTTGTGTTAAGTGAA+CGG + chr4_1:40656569-40656588 Msa0547430:intron 30.0%
AAATTCGACAACAACTTAGA+TGG - chr4_1:40656666-40656685 None:intergenic 30.0%
TATAGTTAGTATTACACTGG+TGG - chr4_1:40656833-40656852 None:intergenic 30.0%
AAAGAAGTTGAGGAATTAGA+AGG + chr4_1:40656963-40656982 Msa0547430:CDS 30.0%
GTTGAAAGATTTCATACCAA+AGG - chr4_1:40657122-40657141 None:intergenic 30.0%
! TAATACCGTACTAATTTGTC+AGG + chr4_1:40657579-40657598 Msa0547430:intron 30.0%
!!! CACCAGAAACAAGATTTTTT+TGG - chr4_1:40657653-40657672 None:intergenic 30.0%
TAAACAATCAAGGTTCACTA+GGG - chr4_1:40657748-40657767 None:intergenic 30.0%
TGAATGTTAAGTACCAAACT+AGG + chr4_1:40658025-40658044 Msa0547430:intron 30.0%
AAGTATGTTCTATCCTAGTT+TGG - chr4_1:40658041-40658060 None:intergenic 30.0%
TATTCTCGAATTTCAAAAGC+AGG + chr4_1:40658103-40658122 Msa0547430:intron 30.0%
TCTTTCTTTGACAGTATAGT+TGG - chr4_1:40658180-40658199 None:intergenic 30.0%
TTCTTATCAATGTCTTCGTA+GGG + chr4_1:40658242-40658261 Msa0547430:intron 30.0%
GGAAATTTGGATAACAATTC+TGG - chr4_1:40658347-40658366 None:intergenic 30.0%
! GAAAACATGAAACATGCTTT+TGG - chr4_1:40658397-40658416 None:intergenic 30.0%
! TTCATGTTTTCTATAGTCCA+AGG + chr4_1:40658406-40658425 Msa0547430:CDS 30.0%
TAAAGATAGTACTAGTACCT+TGG - chr4_1:40658426-40658445 None:intergenic 30.0%
!! TGTTAAAAGCATCAAGAATC+CGG + chr4_1:40658545-40658564 Msa0547430:CDS 30.0%
ATCGTAAATTACCTTCTTTC+GGG - chr4_1:40658618-40658637 None:intergenic 30.0%
!! TTTTTCGAAGGAAGATATTG+CGG - chr4_1:40658658-40658677 None:intergenic 30.0%
!!! ATGTCAAGAAACTTTTTCGA+AGG - chr4_1:40658670-40658689 None:intergenic 30.0%
ATATTATCTTCCTATCTTGC+AGG + chr4_1:40658691-40658710 Msa0547430:intron 30.0%
! TTTGATTTAGGCCATCTATA+GGG - chr4_1:40658756-40658775 None:intergenic 30.0%
!!! TTTTGATTTAGGCCATCTAT+AGG - chr4_1:40658757-40658776 None:intergenic 30.0%
ATAGATGGCCTAAATCAAAA+TGG + chr4_1:40658757-40658776 Msa0547430:CDS 30.0%
TGACATAAAACAGGTAAGAT+GGG + chr4_1:40658991-40659010 Msa0547430:intron 30.0%
!!! GTTTATAAATTTTGGGGTCA+TGG - chr4_1:40659422-40659441 None:intergenic 30.0%
!! GGTTTTATGTCACTATACTA+TGG + chr4_1:40659563-40659582 Msa0547430:CDS 30.0%
AAACATGCAGATTGAAAACT+AGG - chr4_1:40659833-40659852 None:intergenic 30.0%
GACATTATCACTCATGAAAT+TGG - chr4_1:40659912-40659931 None:intergenic 30.0%
TCCAAATGATAACAATGTGA+AGG + chr4_1:40660072-40660091 Msa0547430:CDS 30.0%
TCCTTCACATTGTTATCATT+TGG - chr4_1:40660076-40660095 None:intergenic 30.0%
TGATAACAATGTGAAGGAAA+AGG + chr4_1:40660078-40660097 Msa0547430:CDS 30.0%
GCAAATTCTTGCAAACTATT+CGG + chr4_1:40660100-40660119 Msa0547430:CDS 30.0%
!!! TTCTGTATATTTTGGCTACT+AGG - chr4_1:40660145-40660164 None:intergenic 30.0%
! TTGCTGTGTTCTGTATATTT+TGG - chr4_1:40660153-40660172 None:intergenic 30.0%
ATATACAGAACACAGCAAAA+AGG + chr4_1:40660155-40660174 Msa0547430:CDS 30.0%
ACTTCTTAGAGATTCTGATA+AGG + chr4_1:40660388-40660407 Msa0547430:CDS 30.0%
CTTCTTAGAGATTCTGATAA+GGG + chr4_1:40660389-40660408 Msa0547430:CDS 30.0%
GCAGTAAGTATTCTTCTTTA+TGG + chr4_1:40660472-40660491 Msa0547430:intron 30.0%
TTAACTGTTTCAACATGTAC+TGG + chr4_1:40660534-40660553 Msa0547430:intron 30.0%
! ACTGTTTTCATAAGCTATCA+TGG - chr4_1:40660702-40660721 None:intergenic 30.0%
!!! GATTGGTTTTGTTACAGAAA+TGG + chr4_1:40660851-40660870 Msa0547430:intron 30.0%
! TTGAGTTGTTTATCCAAACA+AGG + chr4_1:40660893-40660912 Msa0547430:intron 30.0%
!! AGTTTTCTAGTGTTCTGTTT+TGG + chr4_1:40660922-40660941 Msa0547430:intron 30.0%
! TAGTTAGAGTCTAAAGTTTC+AGG + chr4_1:40661124-40661143 Msa0547430:exon 30.0%
! AGTTAGAGTCTAAAGTTTCA+GGG + chr4_1:40661125-40661144 Msa0547430:exon 30.0%
CACTTAATTGTCAATCTTTC+TGG - chr4_1:40661274-40661293 None:intergenic 30.0%
CACTAAATAAGTGCTAATCT+TGG + chr4_1:40661294-40661313 Msa0547430:three_prime_UTR 30.0%
ACACAATTCTCAAGAGATAT+TGG - chr4_1:40661343-40661362 None:intergenic 30.0%
! GGTTTTCATATTTCATGTCA+TGG + chr4_1:40661379-40661398 Msa0547430:three_prime_UTR 30.0%
TTTCATATTTCATGTCATGG+TGG + chr4_1:40661382-40661401 Msa0547430:three_prime_UTR 30.0%
!! TTATGAATGTGTTTGGTTTG+GGG + chr4_1:40661424-40661443 Msa0547430:three_prime_UTR 30.0%
! ATAGGAAGCACAGAAACAAA+AGG - chr4_1:40655155-40655174 None:intergenic 35.0%
CATTTGTAGGTACATAGAAG+AGG - chr4_1:40655201-40655220 None:intergenic 35.0%
CTCTTCTATGTACCTACAAA+TGG + chr4_1:40655199-40655218 Msa0547430:five_prime_UTR 35.0%
GTACCTACAAATGGAGATAA+TGG + chr4_1:40655208-40655227 Msa0547430:five_prime_UTR 35.0%
TTTCTTGAGAGAGTCTCAAA+TGG - chr4_1:40655492-40655511 None:intergenic 35.0%
AGAAACAAAGACAGTGTTCA+TGG + chr4_1:40655507-40655526 Msa0547430:exon 35.0%
TGCCATAAGGAATGTGAAAA+AGG + chr4_1:40655577-40655596 Msa0547430:CDS 35.0%
! CTTGAAGATGAACAAGTTGA+AGG - chr4_1:40655631-40655650 None:intergenic 35.0%
TCTTAGGAAGTGAAGTAAGA+GGG - chr4_1:40655711-40655730 None:intergenic 35.0%
TTCTTAGGAAGTGAAGTAAG+AGG - chr4_1:40655712-40655731 None:intergenic 35.0%
CTTACTTCACTTCCTAAGAA+AGG + chr4_1:40655712-40655731 Msa0547430:CDS 35.0%
TCCTAAGAAAGGAAATGTTG+TGG + chr4_1:40655723-40655742 Msa0547430:CDS 35.0%
ACCACAACATTTCCTTTCTT+AGG - chr4_1:40655727-40655746 None:intergenic 35.0%
! AATTGTTCTAAGTGACCTTG+TGG - chr4_1:40655757-40655776 None:intergenic 35.0%
AGTAAACAACCTATGAAGCA+CGG - chr4_1:40656065-40656084 None:intergenic 35.0%
! TTTCTTTTAACAGGCCAACA+AGG + chr4_1:40656124-40656143 Msa0547430:intron 35.0%
ACTTCATTAACCACTGTTGA+GGG - chr4_1:40656539-40656558 None:intergenic 35.0%
AACTTCATTAACCACTGTTG+AGG - chr4_1:40656540-40656559 None:intergenic 35.0%
CTTTCACATCTCAACATTTC+AGG - chr4_1:40656770-40656789 None:intergenic 35.0%
GAGATGTGAAAGTTAATGAG+TGG + chr4_1:40656778-40656797 Msa0547430:intron 35.0%
! GATTGTTTTCGCATTTCAGT+TGG + chr4_1:40656920-40656939 Msa0547430:intron 35.0%
TATGGAAGGAAAAGAAGTTG+AGG + chr4_1:40656953-40656972 Msa0547430:CDS 35.0%
GAATTAGAAGGAGATGAAGA+GGG + chr4_1:40656975-40656994 Msa0547430:CDS 35.0%
! TGAAGATTGTTTTCCTCCTT+TGG + chr4_1:40657103-40657122 Msa0547430:CDS 35.0%
GAAAGATTTCATACCAAAGG+AGG - chr4_1:40657119-40657138 None:intergenic 35.0%
TAACCACTTGCAAAACTGTT+TGG + chr4_1:40657213-40657232 Msa0547430:intron 35.0%
AACCACTTGCAAAACTGTTT+GGG + chr4_1:40657214-40657233 Msa0547430:intron 35.0%
!! ACATGTTCATGAGCTGTTTT+CGG + chr4_1:40657260-40657279 Msa0547430:intron 35.0%
!! CTTATTTTCATAAGCTCTCC+AGG + chr4_1:40657283-40657302 Msa0547430:intron 35.0%
!!! CTCCTTTTACTTTTTACTGC+AGG + chr4_1:40657411-40657430 Msa0547430:intron 35.0%
GTCCTGCAGTAAAAAGTAAA+AGG - chr4_1:40657416-40657435 None:intergenic 35.0%
GTAAACAATCAAGGTTCACT+AGG - chr4_1:40657749-40657768 None:intergenic 35.0%
!! TTGGTTTGGTACTGATATCA+AGG + chr4_1:40657987-40658006 Msa0547430:intron 35.0%
CTTCTTATCAATGTCTTCGT+AGG + chr4_1:40658241-40658260 Msa0547430:intron 35.0%
TCTTATCAATGTCTTCGTAG+GGG + chr4_1:40658243-40658262 Msa0547430:intron 35.0%
! TGGTTACCAACAATTGATTC+AGG - chr4_1:40658327-40658346 None:intergenic 35.0%
! AACATGAAACATGCTTTTGG+TGG - chr4_1:40658394-40658413 None:intergenic 35.0%
! CATTTTGAATCTTGTCCCTA+TGG - chr4_1:40658574-40658593 None:intergenic 35.0%
TGTAGTAGTGGTATGTTGAT+TGG + chr4_1:40658714-40658733 Msa0547430:CDS 35.0%
GTTGATTGGAATAAACGACT+TGG + chr4_1:40658728-40658747 Msa0547430:CDS 35.0%
!!! AAGCACCTCCATTTTGATTT+AGG - chr4_1:40658768-40658787 None:intergenic 35.0%
AGCTTTCTGTGACATAAAAC+AGG + chr4_1:40658982-40659001 Msa0547430:intron 35.0%
GTGACATAAAACAGGTAAGA+TGG + chr4_1:40658990-40659009 Msa0547430:intron 35.0%
! GAAAGAGTATGATTAGGATC+AGG - chr4_1:40659450-40659469 None:intergenic 35.0%
TTTGTTTCATTTATGGCAGC+AGG + chr4_1:40659470-40659489 Msa0547430:intron 35.0%
TTGCAAGGTCAAGAAAATAC+AGG + chr4_1:40659542-40659561 Msa0547430:CDS 35.0%
TAACACTCATAAGCTCAGAA+GGG - chr4_1:40659682-40659701 None:intergenic 35.0%
TTAACACTCATAAGCTCAGA+AGG - chr4_1:40659683-40659702 None:intergenic 35.0%
GTTAATCCTTTCAGTTATGC+AGG + chr4_1:40659698-40659717 Msa0547430:CDS 35.0%
ATAAAGCCTGCATAACTGAA+AGG - chr4_1:40659707-40659726 None:intergenic 35.0%
TTTCAGTTATGCAGGCTTTA+TGG + chr4_1:40659706-40659725 Msa0547430:CDS 35.0%
TGGAAAGTAACAACTTTCCA+AGG + chr4_1:40659726-40659745 Msa0547430:CDS 35.0%
GGAAAGTAACAACTTTCCAA+GGG + chr4_1:40659727-40659746 Msa0547430:CDS 35.0%
TGTAAACTGAAATCCCTTTC+AGG + chr4_1:40659770-40659789 Msa0547430:CDS 35.0%
! GAAATCAGCTTTTCCTGAAA+GGG - chr4_1:40659786-40659805 None:intergenic 35.0%
! TGAAATCAGCTTTTCCTGAA+AGG - chr4_1:40659787-40659806 None:intergenic 35.0%
! GGAAAAGCTGATTTCAACAT+TGG + chr4_1:40659791-40659810 Msa0547430:CDS 35.0%
TGATTTCAACATTGGAGCTT+GGG + chr4_1:40659799-40659818 Msa0547430:CDS 35.0%
! CAATCTGCATGTTTTCCTTA+TGG + chr4_1:40659839-40659858 Msa0547430:CDS 35.0%
GCTTTGTCAATATCTCCATA+AGG - chr4_1:40659857-40659876 None:intergenic 35.0%
! GCTAAACAAGTTAGCTTGAT+TGG - chr4_1:40659879-40659898 None:intergenic 35.0%
AATATCGATGGCGTGTTAAA+CGG - chr4_1:40659935-40659954 None:intergenic 35.0%
AGAAAAGAAGTTGGAAGATC+TGG + chr4_1:40659968-40659987 Msa0547430:CDS 35.0%
TTTCTGCTTCTGCTTCATTA+GGG + chr4_1:40660032-40660051 Msa0547430:CDS 35.0%
TAAATGAAGGTTCACAAGCA+AGG + chr4_1:40660275-40660294 Msa0547430:intron 35.0%
AGTGAACTGGAGAAACTATT+TGG + chr4_1:40660356-40660375 Msa0547430:CDS 35.0%
TTAGAGATTCTGATAAGGGA+TGG + chr4_1:40660393-40660412 Msa0547430:CDS 35.0%
TGACAGTGAGAATGACATAA+TGG + chr4_1:40660430-40660449 Msa0547430:CDS 35.0%
TGAGAATGACATAATGGTTG+TGG + chr4_1:40660436-40660455 Msa0547430:CDS 35.0%
GAGAATGACATAATGGTTGT+GGG + chr4_1:40660437-40660456 Msa0547430:CDS 35.0%
AGAATGACATAATGGTTGTG+GGG + chr4_1:40660438-40660457 Msa0547430:CDS 35.0%
AAGAAGAATACTTACTGCCA+TGG - chr4_1:40660470-40660489 None:intergenic 35.0%
!! TTATCACAATTAAGTTGGGG+AGG + chr4_1:40660748-40660767 Msa0547430:intron 35.0%
!! TATCACAATTAAGTTGGGGA+GGG + chr4_1:40660749-40660768 Msa0547430:intron 35.0%
ATAAGGCTTAGTTGGTTGAT+TGG + chr4_1:40660834-40660853 Msa0547430:intron 35.0%
AAGTGGAGAAGATGACATTT+GGG + chr4_1:40660998-40661017 Msa0547430:CDS 35.0%
ACAGCTATGAGTATCATCAT+TGG - chr4_1:40661031-40661050 None:intergenic 35.0%
TGATGATACTCATAGCTGTT+TGG + chr4_1:40661032-40661051 Msa0547430:CDS 35.0%
ACTACTGTTGGAGAATAATC+TGG - chr4_1:40661108-40661127 None:intergenic 35.0%
CTTTAGACTCTAACTACTGT+TGG - chr4_1:40661120-40661139 None:intergenic 35.0%
TTAGCTCAGCAAAAATTGCA+TGG + chr4_1:40661242-40661261 Msa0547430:three_prime_UTR 35.0%
TAAGTGCTAATCTTGGAAGT+TGG + chr4_1:40661301-40661320 Msa0547430:three_prime_UTR 35.0%
!! TGTGTACTCTAGAATTATGG+TGG + chr4_1:40661358-40661377 Msa0547430:three_prime_UTR 35.0%
ACAATTTGGTAAATGCACTC+TGG + chr4_1:40661510-40661529 Msa0547430:three_prime_UTR 35.0%
AAGGCAAGTAAAGCCAATGT+GGG - chr4_1:40655136-40655155 None:intergenic 40.0%
AAAGGCAAGTAAAGCCAATG+TGG - chr4_1:40655137-40655156 None:intergenic 40.0%
GAAGACAGAGACAATTGCAT+AGG - chr4_1:40655173-40655192 None:intergenic 40.0%
GAAGAATGCATTGTGCCATA+AGG + chr4_1:40655564-40655583 Msa0547430:CDS 40.0%
! GTTGTGGTGTATTTTCCACA+AGG + chr4_1:40655739-40655758 Msa0547430:CDS 40.0%
TGTGGCTGAAGATCATAGTT+TGG - chr4_1:40655814-40655833 None:intergenic 40.0%
ATTCAGTACTCACAAGTAGC+TGG - chr4_1:40655861-40655880 None:intergenic 40.0%
!! GAGAAGTGTTTGTGCTTCAT+AGG - chr4_1:40655914-40655933 None:intergenic 40.0%
! TTCTCAGATTAGCTGTGTTC+CGG + chr4_1:40655929-40655948 Msa0547430:intron 40.0%
AACCTCATCATTCTCCTTGT+TGG - chr4_1:40656141-40656160 None:intergenic 40.0%
TGGTTAATGAATACTCCCTG+CGG + chr4_1:40656337-40656356 Msa0547430:intron 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr4_1:40656477-40656496 Msa0547430:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + chr4_1:40656478-40656497 Msa0547430:intron 40.0%
ATCTGTTATACTACTCCCTC+CGG - chr4_1:40656496-40656515 None:intergenic 40.0%
CTTCATTAACCACTGTTGAG+GGG - chr4_1:40656538-40656557 None:intergenic 40.0%
GTCTCAGTCAACATGTATCA+TGG + chr4_1:40656729-40656748 Msa0547430:intron 40.0%
TTAATGAGTGGAGTAGCGAA+GGG + chr4_1:40656790-40656809 Msa0547430:intron 40.0%
! TTTTCGCATTTCAGTTGGCA+GGG + chr4_1:40656925-40656944 Msa0547430:intron 40.0%
GGAATTAGAAGGAGATGAAG+AGG + chr4_1:40656974-40656993 Msa0547430:CDS 40.0%
!! ATGTGAGGGGTTGATTTTGT+AGG - chr4_1:40657014-40657033 None:intergenic 40.0%
GCTGACCTGACAAATTAGTA+CGG - chr4_1:40657587-40657606 None:intergenic 40.0%
AGAGCTGTTAGACCTAGAAA+CGG + chr4_1:40658297-40658316 Msa0547430:CDS 40.0%
GGTCTTCCTGAATCAATTGT+TGG + chr4_1:40658318-40658337 Msa0547430:CDS 40.0%
GCAACAGATGCAAGGAAATT+TGG - chr4_1:40658360-40658379 None:intergenic 40.0%
TAGCATTTGCAACAGATGCA+AGG - chr4_1:40658368-40658387 None:intergenic 40.0%
!! CATGACTTGCTCTGTAACAT+GGG - chr4_1:40658497-40658516 None:intergenic 40.0%
GATGGCCTAAATCAAAATGG+AGG + chr4_1:40658760-40658779 Msa0547430:CDS 40.0%
!! ATCAAAATGGAGGTGCTTGA+TGG + chr4_1:40658770-40658789 Msa0547430:CDS 40.0%
AAAACAGGTAAGATGGGATG+AGG + chr4_1:40658997-40659016 Msa0547430:intron 40.0%
GAAGAAATATCGATCTCCCA+TGG - chr4_1:40659055-40659074 None:intergenic 40.0%
ATACCAGTGATGAGGTGATT+GGG - chr4_1:40659151-40659170 None:intergenic 40.0%
CATCAAAACCTTGCATCAAC+TGG + chr4_1:40659638-40659657 Msa0547430:CDS 40.0%
AACACTCATAAGCTCAGAAG+GGG - chr4_1:40659681-40659700 None:intergenic 40.0%
CTGATTTCAACATTGGAGCT+TGG + chr4_1:40659798-40659817 Msa0547430:CDS 40.0%
GATTTCAACATTGGAGCTTG+GGG + chr4_1:40659800-40659819 Msa0547430:CDS 40.0%
TGCAGATTGAAAACTAGGCT+TGG - chr4_1:40659828-40659847 None:intergenic 40.0%
ATATCGATGGCGTGTTAAAC+GGG - chr4_1:40659934-40659953 None:intergenic 40.0%
GTTTAACACGCCATCGATAT+TGG + chr4_1:40659934-40659953 Msa0547430:CDS 40.0%
!! GGGAGCATTAGAAAAGAAGT+TGG + chr4_1:40659959-40659978 Msa0547430:CDS 40.0%
GTTTCTGCTTCTGCTTCATT+AGG + chr4_1:40660031-40660050 Msa0547430:CDS 40.0%
TTCTGCTTCTGCTTCATTAG+GGG + chr4_1:40660033-40660052 Msa0547430:CDS 40.0%
AGCAAAAAGGAGTTGCATCA+AGG + chr4_1:40660168-40660187 Msa0547430:CDS 40.0%
CAATGATCTTCTGAGTGAAC+TGG + chr4_1:40660343-40660362 Msa0547430:CDS 40.0%
ACTGGAGAAACTATTTGGCA+TGG + chr4_1:40660361-40660380 Msa0547430:CDS 40.0%
GAGAAACTATTTGGCATGGA+AGG + chr4_1:40660365-40660384 Msa0547430:CDS 40.0%
GAATGACATAATGGTTGTGG+GGG + chr4_1:40660439-40660458 Msa0547430:CDS 40.0%
TTAGTGGGATAAGGCTTAGT+TGG + chr4_1:40660826-40660845 Msa0547430:intron 40.0%
!! TTGCAGTGAGTTTTGTGATG+TGG + chr4_1:40660945-40660964 Msa0547430:intron 40.0%
CATCTTCTCCACTTCTTCTT+TGG - chr4_1:40660992-40661011 None:intergenic 40.0%
GAAGTGGAGAAGATGACATT+TGG + chr4_1:40660997-40661016 Msa0547430:CDS 40.0%
TACTCATAGCTGTTTGGATC+AGG + chr4_1:40661038-40661057 Msa0547430:CDS 40.0%
CTGAGCTAACTAGCTCAAAA+GGG - chr4_1:40661231-40661250 None:intergenic 40.0%
! GAAAAAAGGGTGTGACCAAG+TGG - chr4_1:40655421-40655440 None:intergenic 45.0%
! TTCAGCCACAGATCTTTTGC+AGG + chr4_1:40655824-40655843 Msa0547430:CDS 45.0%
! TCAGCCACAGATCTTTTGCA+GGG + chr4_1:40655825-40655844 Msa0547430:CDS 45.0%
ACAACCCTGCAAAAGATCTG+TGG - chr4_1:40655832-40655851 None:intergenic 45.0%
CAACCTATGAAGCACGGATA+CGG - chr4_1:40656059-40656078 None:intergenic 45.0%
ACAAGTTACTCTGCTACCTC+AGG + chr4_1:40656166-40656185 Msa0547430:CDS 45.0%
AAAAAACCAACCTCAGCCTG+AGG - chr4_1:40656185-40656204 None:intergenic 45.0%
ATTAACCATCCCCTCAACAG+TGG + chr4_1:40656526-40656545 Msa0547430:intron 45.0%
ATTAACCACTGTTGAGGGGA+TGG - chr4_1:40656534-40656553 None:intergenic 45.0%
GTTAATGAGTGGAGTAGCGA+AGG + chr4_1:40656789-40656808 Msa0547430:intron 45.0%
! GTTTTCGCATTTCAGTTGGC+AGG + chr4_1:40656924-40656943 Msa0547430:intron 45.0%
TGTCTTGCAGAACATGTGAG+GGG - chr4_1:40657027-40657046 None:intergenic 45.0%
GTGTCTTGCAGAACATGTGA+GGG - chr4_1:40657028-40657047 None:intergenic 45.0%
AGTGTCTTGCAGAACATGTG+AGG - chr4_1:40657029-40657048 None:intergenic 45.0%
! CTCCCAAACAGTTTTGCAAG+TGG - chr4_1:40657219-40657238 None:intergenic 45.0%
GGAGCGACACACAGATTAAA+GGG - chr4_1:40657395-40657414 None:intergenic 45.0%
AGGAGCGACACACAGATTAA+AGG - chr4_1:40657396-40657415 None:intergenic 45.0%
TTGGCAACAAGCTCTTGAGA+GGG - chr4_1:40657454-40657473 None:intergenic 45.0%
TTTGGCAACAAGCTCTTGAG+AGG - chr4_1:40657455-40657474 None:intergenic 45.0%
! CTAATTTGTCAGGTCAGCCA+AGG + chr4_1:40657589-40657608 Msa0547430:intron 45.0%
GTGATGCAGTGCTCTTTCTA+AGG + chr4_1:40657670-40657689 Msa0547430:CDS 45.0%
!! GAGGGCACTTCTAGGATATA+AGG - chr4_1:40657852-40657871 None:intergenic 45.0%
!! ATATCCTAGAAGTGCCCTCT+CGG + chr4_1:40657853-40657872 Msa0547430:intron 45.0%
GATTCAGGAAGACCGTTTCT+AGG - chr4_1:40658312-40658331 None:intergenic 45.0%
!! GCATGACTTGCTCTGTAACA+TGG - chr4_1:40658498-40658517 None:intergenic 45.0%
ATCAAGAATCCGGTGACCAT+AGG + chr4_1:40658555-40658574 Msa0547430:CDS 45.0%
TCAAGAATCCGGTGACCATA+GGG + chr4_1:40658556-40658575 Msa0547430:CDS 45.0%
AATCTTGTCCCTATGGTCAC+CGG - chr4_1:40658567-40658586 None:intergenic 45.0%
CACTACTACACCTGCAAGAT+AGG - chr4_1:40658704-40658723 None:intergenic 45.0%
CTATCTTGCAGGTGTAGTAG+TGG + chr4_1:40658702-40658721 Msa0547430:intron 45.0%
! ACGACTTGGATCCCTATAGA+TGG + chr4_1:40658742-40658761 Msa0547430:CDS 45.0%
TGGGGAAGACTGAATGCTTA+GGG - chr4_1:40659089-40659108 None:intergenic 45.0%
TTGGGGAAGACTGAATGCTT+AGG - chr4_1:40659090-40659109 None:intergenic 45.0%
CATACCAGTGATGAGGTGAT+TGG - chr4_1:40659152-40659171 None:intergenic 45.0%
ATCACTGGTATGAGTCCTGA+TGG + chr4_1:40659160-40659179 Msa0547430:intron 45.0%
AAGCATTTCATCCCACCATC+AGG - chr4_1:40659178-40659197 None:intergenic 45.0%
TTTATGGCAGCAGGAATCAG+TGG + chr4_1:40659479-40659498 Msa0547430:intron 45.0%
AGCAGGAATCAGTGGAATGA+TGG + chr4_1:40659487-40659506 Msa0547430:intron 45.0%
GCAGGAATCAGTGGAATGAT+GGG + chr4_1:40659488-40659507 Msa0547430:intron 45.0%
GGAGTCAGTAAGATCACCAA+AGG + chr4_1:40659517-40659536 Msa0547430:CDS 45.0%
AGATCACCAAAGGTCTTGCA+AGG + chr4_1:40659527-40659546 Msa0547430:CDS 45.0%
TCTTGACCTTGCAAGACCTT+TGG - chr4_1:40659536-40659555 None:intergenic 45.0%
! GAAGTGCTCAACTCAAAACC+TGG - chr4_1:40659611-40659630 None:intergenic 45.0%
AACCTTGCATCAACTGGAGT+AGG + chr4_1:40659644-40659663 Msa0547430:CDS 45.0%
! TTCCTACTCCAGTTGATGCA+AGG - chr4_1:40659649-40659668 None:intergenic 45.0%
AACTTTCCAAGGGTCTTGCA+AGG + chr4_1:40659737-40659756 Msa0547430:CDS 45.0%
GCAGCTTATGCTCATTTGGA+AGG - chr4_1:40660003-40660022 None:intergenic 45.0%
TCCAAATGAGCATAAGCTGC+AGG + chr4_1:40660003-40660022 Msa0547430:CDS 45.0%
TCCTGCAGCTTATGCTCATT+TGG - chr4_1:40660007-40660026 None:intergenic 45.0%
CTATTCGGCTTTCCTTTGTC+TGG + chr4_1:40660115-40660134 Msa0547430:CDS 45.0%
AAAGGAGTTGCATCAAGGTG+AGG + chr4_1:40660173-40660192 Msa0547430:intron 45.0%
AAGGAGTTGCATCAAGGTGA+GGG + chr4_1:40660174-40660193 Msa0547430:intron 45.0%
GAGATTCTGATAAGGGATGG+AGG + chr4_1:40660396-40660415 Msa0547430:CDS 45.0%
CATTCTCACTGTCAGTGTAG+AGG - chr4_1:40660424-40660443 None:intergenic 45.0%
ACTAAGCGGAGTTGACTACA+GGG - chr4_1:40660811-40660830 None:intergenic 45.0%
TGTAGTCAACTCCGCTTAGT+GGG + chr4_1:40660811-40660830 Msa0547430:intron 45.0%
! CTAAGCCTTATCCCACTAAG+CGG - chr4_1:40660825-40660844 None:intergenic 45.0%
CCAACTGAGGAAGACTTTGA+AGG - chr4_1:40661081-40661100 None:intergenic 45.0%
CCTTCAAAGTCTTCCTCAGT+TGG + chr4_1:40661078-40661097 Msa0547430:CDS 45.0%
ATAATCTGGCTGACCAACTG+AGG - chr4_1:40661094-40661113 None:intergenic 45.0%
GGGTTGTCTTGAGTTTGTGT+TGG + chr4_1:40661145-40661164 Msa0547430:three_prime_UTR 45.0%
GCTGAGCTAACTAGCTCAAA+AGG - chr4_1:40661232-40661251 None:intergenic 45.0%
!! TGAATGTGTTTGGTTTGGGG+TGG + chr4_1:40661427-40661446 Msa0547430:three_prime_UTR 45.0%
GAACTATGGCATGCTTGTGC+TGG + chr4_1:40655685-40655704 Msa0547430:CDS 50.0%
! GATTAGCTGTGTTCCGGTGT+CGG + chr4_1:40655935-40655954 Msa0547430:intron 50.0%
ATGAAGCACGGATACGGACA+CGG - chr4_1:40656053-40656072 None:intergenic 50.0%
TGTCCGTATCCGTGCTTCAT+AGG + chr4_1:40656053-40656072 Msa0547430:intron 50.0%
GGCCAACAAGGAGAATGATG+AGG + chr4_1:40656136-40656155 Msa0547430:intron 50.0%
TGCTTATACCAGTGACCGCA+GGG - chr4_1:40656355-40656374 None:intergenic 50.0%
TTGCTTATACCAGTGACCGC+AGG - chr4_1:40656356-40656375 None:intergenic 50.0%
TCAGTTGGCAGGGATGCATA+TGG + chr4_1:40656935-40656954 Msa0547430:intron 50.0%
TTGGCAGGGATGCATATGGA+AGG + chr4_1:40656939-40656958 Msa0547430:CDS 50.0%
GAAGGAGATGAAGAGGGAGA+TGG + chr4_1:40656981-40657000 Msa0547430:CDS 50.0%
GAGATGAAGAGGGAGATGGA+GGG + chr4_1:40656985-40657004 Msa0547430:CDS 50.0%
GTCTCTGATACCAGCACTCA+TGG + chr4_1:40657053-40657072 Msa0547430:CDS 50.0%
TCTGATACCAGCACTCATGG+TGG + chr4_1:40657056-40657075 Msa0547430:CDS 50.0%
AGAGAATCCACCATGAGTGC+TGG - chr4_1:40657066-40657085 None:intergenic 50.0%
!! AGGGAGGCTAAAGCCTTGTT+TGG - chr4_1:40657376-40657395 None:intergenic 50.0%
GCGACACACAGATTAAAGGG+AGG - chr4_1:40657392-40657411 None:intergenic 50.0%
CTTGTTGCCAAAGACCTGCA+TGG + chr4_1:40657463-40657482 Msa0547430:CDS 50.0%
ATTTCCACTCCACACCATGC+AGG - chr4_1:40657480-40657499 None:intergenic 50.0%
ATTTGTCAGGTCAGCCAAGG+CGG + chr4_1:40657592-40657611 Msa0547430:intron 50.0%
AAGGTATGTGCGTTTGTGCC+TGG + chr4_1:40657689-40657708 Msa0547430:intron 50.0%
TGTCTTCGTAGGGGTGAGAA+CGG + chr4_1:40658252-40658271 Msa0547430:intron 50.0%
TGGACGAATCACCCGAAAGA+AGG + chr4_1:40658604-40658623 Msa0547430:CDS 50.0%
ATCAAGACCGTGTATCGCCA+TGG + chr4_1:40659035-40659054 Msa0547430:CDS 50.0%
TCAAGACCGTGTATCGCCAT+GGG + chr4_1:40659036-40659055 Msa0547430:CDS 50.0%
GAAGACTGAATGCTTAGGGG+AGG - chr4_1:40659085-40659104 None:intergenic 50.0%
GGGGAAGACTGAATGCTTAG+GGG - chr4_1:40659088-40659107 None:intergenic 50.0%
TCCGCGGTTTCTTCAGTCTT+GGG - chr4_1:40659108-40659127 None:intergenic 50.0%
AGTGATGAGGTGATTGGGTG+AGG - chr4_1:40659146-40659165 None:intergenic 50.0%
TCACCCAATCACCTCATCAC+TGG + chr4_1:40659145-40659164 Msa0547430:CDS 50.0%
CAGGACTCATACCAGTGATG+AGG - chr4_1:40659159-40659178 None:intergenic 50.0%
ACTGGTATGAGTCCTGATGG+TGG + chr4_1:40659163-40659182 Msa0547430:intron 50.0%
CTGGTATGAGTCCTGATGGT+GGG + chr4_1:40659164-40659183 Msa0547430:intron 50.0%
!! CAGTGGAATGATGGGCTTTG+AGG + chr4_1:40659496-40659515 Msa0547430:CDS 50.0%
! AACCTGGCTGGTTGGTTACT+TGG - chr4_1:40659595-40659614 None:intergenic 50.0%
CAACTCAAAACCTGGCTGGT+TGG - chr4_1:40659603-40659622 None:intergenic 50.0%
TGCTCAACTCAAAACCTGGC+TGG - chr4_1:40659607-40659626 None:intergenic 50.0%
TCTTGACCTTGCAAGACCCT+TGG - chr4_1:40659746-40659765 None:intergenic 50.0%
AACACGCCATCGATATTGGC+AGG + chr4_1:40659938-40659957 Msa0547430:CDS 50.0%
ACACGCCATCGATATTGGCA+GGG + chr4_1:40659939-40659958 Msa0547430:CDS 50.0%
ATGCTCCCTGCCAATATCGA+TGG - chr4_1:40659947-40659966 None:intergenic 50.0%
CTACTAGGTTCGCCAGACAA+AGG - chr4_1:40660130-40660149 None:intergenic 50.0%
GGTTCACAAGCAAGGAAGCT+TGG + chr4_1:40660283-40660302 Msa0547430:intron 50.0%
CACAAGCAAGGAAGCTTGGT+TGG + chr4_1:40660287-40660306 Msa0547430:CDS 50.0%
ATTGACCTCTCGAGGTTGAG+CGG + chr4_1:40660317-40660336 Msa0547430:CDS 50.0%
CACTAAGCGGAGTTGACTAC+AGG - chr4_1:40660812-40660831 None:intergenic 50.0%
CTGTAGTCAACTCCGCTTAG+TGG + chr4_1:40660810-40660829 Msa0547430:intron 50.0%
CAACTCCGCTTAGTGGGATA+AGG + chr4_1:40660817-40660836 Msa0547430:intron 50.0%
!! GTTTGGTTTGGGGTGGAACT+TGG + chr4_1:40661434-40661453 Msa0547430:three_prime_UTR 50.0%
TACTCTGCTACCTCAGGCTG+AGG + chr4_1:40656172-40656191 Msa0547430:CDS 55.0%
TGAATACTCCCTGCGGTCAC+TGG + chr4_1:40656344-40656363 Msa0547430:intron 55.0%
GGAGATGAAGAGGGAGATGG+AGG + chr4_1:40656984-40657003 Msa0547430:CDS 55.0%
CAATCTTCAGCAGCTCTGCG+AGG - chr4_1:40657092-40657111 None:intergenic 55.0%
TGCCAAAGACCTGCATGGTG+TGG + chr4_1:40657468-40657487 Msa0547430:CDS 55.0%
CTCCACACCATGCAGGTCTT+TGG - chr4_1:40657473-40657492 None:intergenic 55.0%
AAGACCTGCATGGTGTGGAG+TGG + chr4_1:40657473-40657492 Msa0547430:CDS 55.0%
GTTGTGAGTAGATGCCGCCT+TGG - chr4_1:40657609-40657628 None:intergenic 55.0%
AGGCGGCATCTACTCACAAC+TGG + chr4_1:40657609-40657628 Msa0547430:CDS 55.0%
GGCATCTACTCACAACTGGC+TGG + chr4_1:40657613-40657632 Msa0547430:CDS 55.0%
TACCTTCTCCAGACCTCACC+TGG + chr4_1:40657903-40657922 Msa0547430:intron 55.0%
GTAAGGCAGTCTAGTGCACG+AGG - chr4_1:40657935-40657954 None:intergenic 55.0%
GTCTTCGTAGGGGTGAGAAC+GGG + chr4_1:40658253-40658272 Msa0547430:intron 55.0%
TCTTCGTAGGGGTGAGAACG+GGG + chr4_1:40658254-40658273 Msa0547430:intron 55.0%
GAGAACGGGGAGCTGAGATT+AGG + chr4_1:40658267-40658286 Msa0547430:CDS 55.0%
CGATCTCCCATGGCGATACA+CGG - chr4_1:40659045-40659064 None:intergenic 55.0%
TGAATGCTTAGGGGAGGCTG+AGG - chr4_1:40659079-40659098 None:intergenic 55.0%
CCGCGGTTTCTTCAGTCTTG+GGG - chr4_1:40659107-40659126 None:intergenic 55.0%
CCCCAAGACTGAAGAAACCG+CGG + chr4_1:40659104-40659123 Msa0547430:CDS 55.0%
GTCCGCGGTTTCTTCAGTCT+TGG - chr4_1:40659109-40659128 None:intergenic 55.0%
AGACTGAAGAAACCGCGGAC+CGG + chr4_1:40659109-40659128 Msa0547430:CDS 55.0%
GACCAAGTAACCAACCAGCC+AGG + chr4_1:40659590-40659609 Msa0547430:CDS 55.0%
GAAGAGCCATTGACCTCTCG+AGG + chr4_1:40660309-40660328 Msa0547430:CDS 55.0%
GCTCAACCTCGAGAGGTCAA+TGG - chr4_1:40660318-40660337 None:intergenic 55.0%
TGGTTGTGGGGGATGATCCA+TGG + chr4_1:40660450-40660469 Msa0547430:CDS 55.0%
! CTGTGTTCCGGTGTCGGACA+CGG + chr4_1:40655941-40655960 Msa0547430:intron 60.0%
! TGTGTTCCGGTGTCGGACAC+GGG + chr4_1:40655942-40655961 Msa0547430:intron 60.0%
CTGCTACCTCAGGCTGAGGT+TGG + chr4_1:40656176-40656195 Msa0547430:intron 60.0%
!! CAAGCCGAGAGGGCACTTCT+AGG - chr4_1:40657860-40657879 None:intergenic 60.0%
! AAGTGCCCTCTCGGCTTGCA+GGG + chr4_1:40657862-40657881 Msa0547430:intron 60.0%
CACCAGGTGAGGTCTGGAGA+AGG - chr4_1:40657908-40657927 None:intergenic 60.0%
CTTCTCCAGACCTCACCTGG+TGG + chr4_1:40657906-40657925 Msa0547430:intron 60.0%
TAGTGCACGAGGCTTCCACC+AGG - chr4_1:40657924-40657943 None:intergenic 60.0%
TGTAGCCGCTCAACCTCGAG+AGG - chr4_1:40660325-40660344 None:intergenic 60.0%
ACACGACCCGTGTCCGACAC+CGG - chr4_1:40655951-40655970 None:intergenic 65.0%
! GAAGTGCCCTCTCGGCTTGC+AGG + chr4_1:40657861-40657880 Msa0547430:intron 65.0%
! AGTGCCCTCTCGGCTTGCAG+GGG + chr4_1:40657863-40657882 Msa0547430:intron 65.0%
TTGCCCCCTGCAAGCCGAGA+GGG - chr4_1:40657870-40657889 None:intergenic 65.0%
GGCTTCCACCAGGTGAGGTC+TGG - chr4_1:40657914-40657933 None:intergenic 65.0%
CACGAGGCTTCCACCAGGTG+AGG - chr4_1:40657919-40657938 None:intergenic 65.0%
! GTGCCCTCTCGGCTTGCAGG+GGG + chr4_1:40657864-40657883 Msa0547430:intron 70.0%
CTTGCCCCCTGCAAGCCGAG+AGG - chr4_1:40657871-40657890 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 40655133 40661549 40655133 ID=Msa0547430;Name=Msa0547430
chr4_1 mRNA 40655133 40661549 40655133 ID=Msa0547430-mRNA-1;Parent=Msa0547430;Name=Msa0547430-mRNA-1;_AED=0.07;_eAED=0.07;_QI=393|1|1|1|1|1|12|412|788
chr4_1 exon 40655133 40655867 40655133 ID=Msa0547430-mRNA-1:exon:10367;Parent=Msa0547430-mRNA-1
chr4_1 exon 40656137 40656193 40656137 ID=Msa0547430-mRNA-1:exon:10368;Parent=Msa0547430-mRNA-1
chr4_1 exon 40656939 40657124 40656939 ID=Msa0547430-mRNA-1:exon:10369;Parent=Msa0547430-mRNA-1
chr4_1 exon 40657433 40657517 40657433 ID=Msa0547430-mRNA-1:exon:10370;Parent=Msa0547430-mRNA-1
chr4_1 exon 40657601 40657691 40657601 ID=Msa0547430-mRNA-1:exon:10371;Parent=Msa0547430-mRNA-1
chr4_1 exon 40658263 40658427 40658263 ID=Msa0547430-mRNA-1:exon:10372;Parent=Msa0547430-mRNA-1
chr4_1 exon 40658506 40658625 40658506 ID=Msa0547430-mRNA-1:exon:10373;Parent=Msa0547430-mRNA-1
chr4_1 exon 40658713 40658791 40658713 ID=Msa0547430-mRNA-1:exon:10374;Parent=Msa0547430-mRNA-1
chr4_1 exon 40659004 40659166 40659004 ID=Msa0547430-mRNA-1:exon:10375;Parent=Msa0547430-mRNA-1
chr4_1 exon 40659489 40660189 40659489 ID=Msa0547430-mRNA-1:exon:10376;Parent=Msa0547430-mRNA-1
chr4_1 exon 40660284 40660474 40660284 ID=Msa0547430-mRNA-1:exon:10377;Parent=Msa0547430-mRNA-1
chr4_1 exon 40660951 40661549 40660951 ID=Msa0547430-mRNA-1:exon:10378;Parent=Msa0547430-mRNA-1
chr4_1 five_prime_UTR 40655133 40655525 40655133 ID=Msa0547430-mRNA-1:five_prime_utr;Parent=Msa0547430-mRNA-1
chr4_1 CDS 40655526 40655867 40655526 ID=Msa0547430-mRNA-1:cds;Parent=Msa0547430-mRNA-1
chr4_1 CDS 40656137 40656193 40656137 ID=Msa0547430-mRNA-1:cds;Parent=Msa0547430-mRNA-1
chr4_1 CDS 40656939 40657124 40656939 ID=Msa0547430-mRNA-1:cds;Parent=Msa0547430-mRNA-1
chr4_1 CDS 40657433 40657517 40657433 ID=Msa0547430-mRNA-1:cds;Parent=Msa0547430-mRNA-1
chr4_1 CDS 40657601 40657691 40657601 ID=Msa0547430-mRNA-1:cds;Parent=Msa0547430-mRNA-1
chr4_1 CDS 40658263 40658427 40658263 ID=Msa0547430-mRNA-1:cds;Parent=Msa0547430-mRNA-1
chr4_1 CDS 40658506 40658625 40658506 ID=Msa0547430-mRNA-1:cds;Parent=Msa0547430-mRNA-1
chr4_1 CDS 40658713 40658791 40658713 ID=Msa0547430-mRNA-1:cds;Parent=Msa0547430-mRNA-1
chr4_1 CDS 40659004 40659166 40659004 ID=Msa0547430-mRNA-1:cds;Parent=Msa0547430-mRNA-1
chr4_1 CDS 40659489 40660189 40659489 ID=Msa0547430-mRNA-1:cds;Parent=Msa0547430-mRNA-1
chr4_1 CDS 40660284 40660474 40660284 ID=Msa0547430-mRNA-1:cds;Parent=Msa0547430-mRNA-1
chr4_1 CDS 40660951 40661137 40660951 ID=Msa0547430-mRNA-1:cds;Parent=Msa0547430-mRNA-1
chr4_1 three_prime_UTR 40661138 40661549 40661138 ID=Msa0547430-mRNA-1:three_prime_utr;Parent=Msa0547430-mRNA-1
Gene Sequence

>Msa0547430

ATGGAAATTGATCTAAACAATGAAGTGATTGAGGTTGAGAAGAATGCATTGTGCCATAAGGAATGTGAAAAAGGTTTTTGTTTCTGTATTTCTTGTTTGTCTCCTTCAACTTGTTCATCTTCAAGTTCAACTTCACCACTTGTTTCTTCTTCTTATCTTGAACTATGGCATGCTTGTGCTGGCCCTCTTACTTCACTTCCTAAGAAAGGAAATGTTGTGGTGTATTTTCCACAAGGTCACTTAGAACAATTTGCTTCTTTTTCTCCTTTTAAACAATTGGAGATACCAAACTATGATCTTCAGCCACAGATCTTTTGCAGGGTTGTCAATGTCCAGCTACTTGCCAACAAGGAGAATGATGAGGTTTATACACAAGTTACTCTGCTACCTCAGGCTGAGTTGGCAGGGATGCATATGGAAGGAAAAGAAGTTGAGGAATTAGAAGGAGATGAAGAGGGAGATGGAGGGTCACCTACAAAATCAACCCCTCACATGTTCTGCAAGACACTAACTGTCTCTGATACCAGCACTCATGGTGGATTCTCTGTGCCTCGCAGAGCTGCTGAAGATTGTTTTCCTCCTTTGGACTATAAGCTGCAAAGACCCTCTCAAGAGCTTGTTGCCAAAGACCTGCATGGTGTGGAGTGGAAATTTCGCCATATTTATAGAGGTCAGCCAAGGCGGCATCTACTCACAACTGGCTGGAGCATTTTTGTGAACCAAAAAAATCTTGTTTCTGGTGATGCAGTGCTCTTTCTAAGGGGTGAGAACGGGGAGCTGAGATTAGGAATCAGAAGAGCTGTTAGACCTAGAAACGGTCTTCCTGAATCAATTGTTGGTAACCAGAATTGTTATCCAAATTTCCTTGCATCTGTTGCAAATGCTATATCCACCAAAAGCATGTTTCATGTTTTCTATAGTCCAAGAGCAAGTCATGCAGAGTTTGTTGTTCCGTACCAAAAATATGTTAAAAGCATCAAGAATCCGGTGACCATAGGGACAAGATTCAAAATGAGAATTGAAATGGACGAATCACCCGAAAGAAGGTGTAGTAGTGGTATGTTGATTGGAATAAACGACTTGGATCCCTATAGATGGCCTAAATCAAAATGGAGGTGCTTGATGGTAAGATGGGATGAGGATACTGAGACTAATCATCAAGACCGTGTATCGCCATGGGAGATCGATATTTCTTCTCCTCAGCCTCCCCTAAGCATTCAGTCTTCCCCAAGACTGAAGAAACCGCGGACCGGTCTACTGGTTGCCTCACCCAATCACCTCATCACTGCAGGAATCAGTGGAATGATGGGCTTTGAGGAGTCAGTAAGATCACCAAAGGTCTTGCAAGGTCAAGAAAATACAGGTTTTATGTCACTATACTATGGATGTGACCAAGTAACCAACCAGCCAGGTTTTGAGTTGAGCACTTCAAGTCATCATCAAAACCTTGCATCAACTGGAGTAGGAAAAGTAGTTACCCCTTCTGAGCTTATGAGTGTTAATCCTTTCAGTTATGCAGGCTTTATGGAAAGTAACAACTTTCCAAGGGTCTTGCAAGGTCAAGAAATATGTAAACTGAAATCCCTTTCAGGAAAAGCTGATTTCAACATTGGAGCTTGGGGAACCAAGCCTAGTTTTCAATCTGCATGTTTTCCTTATGGAGATATTGACAAAGCCAATCAAGCTAACTTGTTTAGCTCAAAACACACCAATTTCATGAGTGATAATGTCCCGTTTAACACGCCATCGATATTGGCAGGGAGCATTAGAAAAGAAGTTGGAAGATCTGGATCTATTCTCCTTCCAAATGAGCATAAGCTGCAGGACAATGTTTCTGCTTCTGCTTCATTAGGGGATACTAATATAAATGTTCCAAATGATAACAATGTGAAGGAAAAGGCAAATTCTTGCAAACTATTCGGCTTTCCTTTGTCTGGCGAACCTAGTAGCCAAAATATACAGAACACAGCAAAAAGGAGTTGCATCAAGGTTCACAAGCAAGGAAGCTTGGTTGGAAGAGCCATTGACCTCTCGAGGTTGAGCGGCTACAATGATCTTCTGAGTGAACTGGAGAAACTATTTGGCATGGAAGGACTTCTTAGAGATTCTGATAAGGGATGGAGGATCCTCTACACTGACAGTGAGAATGACATAATGGTTGTGGGGGATGATCCATGGCATGAGTTTTGTGATGTGGTATCTAAGATCCATATATATACCAAAGAAGAAGTGGAGAAGATGACATTTGGGATGATGACCAATGATGATACTCATAGCTGTTTGGATCAGGCACCAGTTATTATTGAACCTTCAAAGTCTTCCTCAGTTGGTCAGCCAGATTATTCTCCAACAGTAGTTAGAGTCTAA
Protein sequence

>Msa0547430

MEIDLNNEVIEVEKNALCHKECEKGFCFCISCLSPSTCSSSSSTSPLVSSSYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQFASFSPFKQLEIPNYDLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELAGMHMEGKEVEELEGDEEGDGGSPTKSTPHMFCKTLTVSDTSTHGGFSVPRRAAEDCFPPLDYKLQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVNQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNGLPESIVGNQNCYPNFLASVANAISTKSMFHVFYSPRASHAEFVVPYQKYVKSIKNPVTIGTRFKMRIEMDESPERRCSSGMLIGINDLDPYRWPKSKWRCLMVRWDEDTETNHQDRVSPWEIDISSPQPPLSIQSSPRLKKPRTGLLVASPNHLITAGISGMMGFEESVRSPKVLQGQENTGFMSLYYGCDQVTNQPGFELSTSSHHQNLASTGVGKVVTPSELMSVNPFSYAGFMESNNFPRVLQGQEICKLKSLSGKADFNIGAWGTKPSFQSACFPYGDIDKANQANLFSSKHTNFMSDNVPFNTPSILAGSIRKEVGRSGSILLPNEHKLQDNVSASASLGDTNINVPNDNNVKEKANSCKLFGFPLSGEPSSQNIQNTAKRSCIKVHKQGSLVGRAIDLSRLSGYNDLLSELEKLFGMEGLLRDSDKGWRILYTDSENDIMVVGDDPWHEFCDVVSKIHIYTKEEVEKMTFGMMTNDDTHSCLDQAPVIIEPSKSSSVGQPDYSPTVVRV*