AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0311280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0311280 MtrunA17_Chr2g0280141 89.238 827 54 5 1 801 1 818 0.0 1396
Msa0311280 MtrunA17_Chr2g0325811 44.258 836 366 15 19 799 40 830 0.0 541
Msa0311280 MtrunA17_Chr2g0325711 42.892 816 393 15 10 781 31 817 6.26e-177 529
Msa0311280 MtrunA17_Chr2g0325661 42.873 884 354 19 16 800 45 876 2.38e-164 498
Msa0311280 MtrunA17_Chr2g0325861 42.484 805 303 14 61 725 62 846 1.42e-157 480
Msa0311280 MtrunA17_Chr2g0325361 48.480 592 262 8 247 800 491 1077 4.26e-133 422
Msa0311280 MtrunA17_Chr2g0325361 35.390 551 293 10 25 527 13 548 8.52e-56 208
Msa0311280 MtrunA17_Chr6g0471251 38.601 829 350 21 19 800 51 767 5.75e-128 400
Msa0311280 MtrunA17_Chr2g0325611 51.812 469 185 10 358 800 137 590 1.85e-123 383
Msa0311280 MtrunA17_Chr2g0325611 38.735 253 118 7 187 426 93 321 1.21e-25 112
Msa0311280 MtrunA17_Chr2g0325351 45.455 594 272 12 249 800 105 688 2.93e-115 365
Msa0311280 MtrunA17_Chr2g0325351 36.637 333 141 6 92 413 142 415 8.57e-32 132
Msa0311280 MtrunA17_Chr2g0325321 40.428 747 357 10 41 702 18 761 6.62e-115 366
Msa0311280 MtrunA17_Chr2g0325621 42.832 558 273 9 271 800 121 660 9.90e-108 344
Msa0311280 MtrunA17_Chr2g0325621 34.096 437 202 8 12 414 3 387 1.31e-36 147
Msa0311280 MtrunA17_Chr2g0325231 43.444 511 229 9 203 712 431 882 1.25e-101 334
Msa0311280 MtrunA17_Chr2g0325231 31.891 624 280 15 19 527 16 609 5.22e-48 183
Msa0311280 MtrunA17_Chr5g0434761 61.509 265 98 4 539 800 2 265 1.47e-92 291
Msa0311280 MtrunA17_Chr2g0325701 44.096 415 207 8 297 699 188 589 1.19e-77 262
Msa0311280 MtrunA17_Chr2g0325701 34.000 300 161 7 182 468 144 419 1.73e-25 112
Msa0311280 MtrunA17_Chr2g0325701 34.959 246 152 4 184 423 178 421 1.92e-23 105
Msa0311280 MtrunA17_Chr2g0325631 59.623 265 103 4 539 800 2 265 2.81e-77 250
Msa0311280 MtrunA17_Chr3g0140591 74.405 168 42 1 535 702 6 172 3.20e-75 241
Msa0311280 MtrunA17_Chr2g0325291 65.366 205 68 3 554 756 3 206 7.78e-71 232
Msa0311280 MtrunA17_Chr5g0416271 38.523 501 227 12 215 699 47 482 2.91e-70 239
Msa0311280 MtrunA17_Chr5g0416271 32.934 334 181 7 42 363 14 316 5.67e-26 112
Msa0311280 MtrunA17_Chr5g0416271 35.556 270 144 7 186 451 78 321 1.02e-22 102
Msa0311280 MtrunA17_Chr2g0325221 35.739 568 292 9 19 528 45 597 9.39e-70 243
Msa0311280 MtrunA17_Chr2g0325221 62.376 101 37 1 700 799 599 699 9.33e-29 122
Msa0311280 MtrunA17_Chr2g0325221 31.880 367 202 13 99 439 256 600 4.65e-20 95.5
Msa0311280 MtrunA17_Chr2g0325281 35.556 585 287 8 41 537 18 600 1.85e-68 238
Msa0311280 MtrunA17_Chr2g0333341 37.500 496 252 14 249 719 159 621 3.00e-65 229
Msa0311280 MtrunA17_Chr2g0333341 35.096 416 188 12 25 395 72 450 2.39e-36 145
Msa0311280 MtrunA17_Chr2g0325691 35.548 557 275 10 52 527 63 616 2.18e-56 206
Msa0311280 MtrunA17_Chr2g0325691 33.613 476 258 15 121 569 283 727 4.69e-36 145
Msa0311280 MtrunA17_Chr4g0044221 63.226 155 28 2 484 637 168 294 2.10e-54 191
Msa0311280 MtrunA17_Chr4g0044221 57.143 189 80 1 81 268 1 189 2.86e-54 190
Msa0311280 MtrunA17_Chr2g0325241 41.745 321 148 6 306 625 143 425 6.66e-50 181
Msa0311280 MtrunA17_Chr2g0325241 39.344 183 108 1 247 426 126 308 1.31e-20 95.5
Msa0311280 MtrunA17_Chr2g0325241 28.613 346 177 11 25 367 41 319 6.03e-11 65.5
Msa0311280 MtrunA17_Chr2g0332961 41.925 322 138 12 367 672 65 353 1.43e-46 170
Msa0311280 MtrunA17_Chr2g0325721 35.388 503 246 10 22 475 29 501 3.39e-46 172
Msa0311280 MtrunA17_Chr2g0325721 30.570 386 234 9 172 537 108 479 4.83e-16 82.0
Msa0311280 MtrunA17_Chr2g0332951 47.807 228 94 8 481 702 2 210 2.52e-44 159
Msa0311280 MtrunA17_Chr2g0325761 30.615 650 331 11 21 604 53 648 3.41e-43 167
Msa0311280 MtrunA17_Chr2g0325761 63.265 98 35 1 699 795 591 688 8.45e-29 123
Msa0311280 MtrunA17_Chr2g0325771 58.046 174 61 3 532 702 11 175 6.58e-42 150
Msa0311280 MtrunA17_Chr8g0361651 36.413 368 205 11 445 798 53 405 1.76e-40 155
Msa0311280 MtrunA17_Chr2g0325331 58.170 153 62 2 540 691 3 154 2.09e-38 140
Msa0311280 MtrunA17_Chr4g0024061 30.030 656 349 24 190 798 59 651 3.43e-38 152
Msa0311280 MtrunA17_Chr2g0325651 32.311 424 184 10 21 408 30 386 1.51e-36 142
Msa0311280 MtrunA17_Chr2g0325651 45.517 145 68 3 388 524 236 377 7.83e-21 95.5
Msa0311280 MtrunA17_Chr2g0325651 45.033 151 71 3 374 512 236 386 4.38e-20 93.2
Msa0311280 MtrunA17_Chr2g0325651 38.889 162 83 2 304 458 236 388 1.65e-17 85.5
Msa0311280 MtrunA17_Chr2g0325651 37.121 132 70 1 393 524 227 345 3.59e-12 68.9
Msa0311280 MtrunA17_Chr7g0235901 35.754 358 171 5 60 414 10 311 1.12e-34 134
Msa0311280 MtrunA17_Chr7g0235901 36.574 216 100 2 295 510 132 310 2.10e-20 92.8
Msa0311280 MtrunA17_Chr2g0325311 64.078 103 35 2 700 800 17 119 3.34e-32 121
Msa0311280 MtrunA17_Chr2g0325641 36.446 332 189 5 211 536 3 318 5.02e-30 121
Msa0311280 MtrunA17_Chr2g0325641 36.727 275 166 2 248 521 1 268 5.23e-28 115
Msa0311280 MtrunA17_Chr2g0325641 38.189 254 131 6 295 540 6 241 1.01e-22 100
Msa0311280 MtrunA17_Chr2g0325641 35.000 260 131 5 189 417 58 310 7.66e-22 97.4
Msa0311280 MtrunA17_Chr3g0140581 55.147 136 59 1 91 226 21 154 1.58e-29 114
Msa0311280 MtrunA17_Chr2g0325271 55.769 104 44 2 699 800 40 143 1.40e-27 108
Msa0311280 MtrunA17_Chr2g0325201 35.443 237 138 2 117 353 2 223 3.90e-25 104
Msa0311280 MtrunA17_Chr2g0325781 32.011 353 125 9 16 340 40 305 2.57e-22 98.6
Msa0311280 MtrunA17_Chr2g0325261 31.949 313 127 6 55 332 45 306 3.51e-22 98.2
Msa0311280 MtrunA17_Chr2g0325341 31.949 313 127 6 55 332 45 306 3.51e-22 98.2
Msa0311280 MtrunA17_Chr5g0434751 36.900 271 142 3 264 512 3 266 9.08e-22 96.7
Msa0311280 MtrunA17_Chr5g0434751 35.146 239 137 3 187 418 35 262 4.71e-15 76.6
Msa0311280 MtrunA17_Chr5g0434751 39.444 180 102 1 247 419 56 235 1.87e-13 72.0
Msa0311280 MtrunA17_Chr5g0434741 31.449 283 126 7 60 325 68 299 2.88e-21 95.5
Msa0311280 MtrunA17_Chr7g0235921 59.794 97 38 1 616 712 1 96 1.94e-20 87.4
Msa0311280 MtrunA17_Chr4g0053711 32.143 252 145 8 574 801 194 443 4.61e-20 94.7
Msa0311280 MtrunA17_Chr2g0325741 29.480 346 117 11 16 317 42 304 2.03e-17 84.0
Msa0311280 MtrunA17_Chr2g0325751 47.748 111 51 1 294 404 11 114 1.11e-16 78.2
Msa0311280 MtrunA17_Chr2g0325751 37.037 162 88 3 388 548 7 155 3.73e-15 73.6
Msa0311280 MtrunA17_Chr2g0325751 46.087 115 55 2 304 418 7 114 4.11e-14 70.9
Msa0311280 MtrunA17_Chr2g0325791 46.825 126 57 1 309 434 41 156 1.78e-16 81.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0311280 AT5G27220.1 28.079 203 134 7 579 776 872 1067 3.55e-15 80.5
Msa0311280 AT5G27220.1 25.736 645 405 20 75 695 208 802 1.20e-14 79.0
Msa0311280 AT5G27220.3 28.079 203 134 7 579 776 872 1067 3.55e-15 80.5
Msa0311280 AT5G27220.3 25.736 645 405 20 75 695 208 802 1.20e-14 79.0
Msa0311280 AT5G27220.4 25.736 645 405 20 75 695 208 802 7.02e-15 79.7
Msa0311280 AT5G27220.4 27.815 151 101 4 628 776 868 1012 5.10e-12 70.5
Msa0311280 AT5G27220.2 25.736 645 405 20 75 695 208 802 7.02e-15 79.7
Msa0311280 AT5G27220.2 27.815 151 101 4 628 776 868 1012 5.10e-12 70.5
Msa0311280 AT1G31814.1 26.786 224 150 6 567 781 117 335 1.29e-13 74.7
Msa0311280 AT5G48385.1 27.333 150 108 1 653 801 308 457 2.23e-13 74.3
Msa0311280 AT5G27230.1 27.003 337 195 14 439 753 88 395 4.35e-12 70.5

Find 164 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCATTGTCAACTTTGAATT+TGG 0.089700 2_4:-6135378 Msa0311280:CDS
TTGCTCCTTCTGTCAATTTA+TGG 0.102499 2_4:-6133420 Msa0311280:CDS
GATAGATAGTATTCTAATTT+TGG 0.129006 2_4:-6132172 Msa0311280:three_prime_UTR
GGTTTGGCACATAAAGTTTC+TGG 0.195386 2_4:-6133306 Msa0311280:intron
CCAAAGCGAAACACTGTATT+TGG 0.198770 2_4:+6136924 None:intergenic
GCTCTTCTTCATGAGCTTAA+TGG 0.209076 2_4:+6135229 None:intergenic
TGTAGAGCTGTTTGGGACTA+TGG 0.236978 2_4:-6133328 Msa0311280:CDS
TTTCTTATTTAGAAGCTCTT+TGG 0.268782 2_4:+6135139 None:intergenic
TCAAATGAGAAGCTCTATAA+AGG 0.280877 2_4:-6134627 Msa0311280:CDS
GTAGTTCAATAATGGTTGTT+AGG 0.295009 2_4:-6135478 Msa0311280:exon
AGTTCATCAATTTCCTCAAT+TGG 0.304511 2_4:+6133720 None:intergenic
CAAATACAGTGTTTCGCTTT+GGG 0.315072 2_4:-6136923 Msa0311280:five_prime_UTR
TGCAAATCCAGTACCAGTTC+TGG 0.327369 2_4:-6133448 Msa0311280:CDS
TCATCAAAAGGCCTCTTTGC+TGG 0.337180 2_4:+6135302 None:intergenic
TAGATCAACTGATTGATTCT+TGG 0.344991 2_4:+6132593 None:intergenic
ATGCAGAACAAAATCGAAAA+AGG 0.349065 2_4:-6135071 Msa0311280:CDS
CCTTCTGTCAATTTATGGAT+TGG 0.349385 2_4:-6133415 Msa0311280:CDS
TCATAATCAAAACATCAAAA+TGG 0.358355 2_4:+6132000 None:intergenic
CTTCCATCAATGGCAGGACT+TGG 0.360593 2_4:+6133759 None:intergenic
TCGGTCACACTGCTTCATTT+TGG 0.361776 2_4:+6134668 None:intergenic
CCAAATACAGTGTTTCGCTT+TGG 0.364145 2_4:-6136924 Msa0311280:five_prime_UTR
TCATTGTCAACTTTGAATTT+GGG 0.364609 2_4:-6135377 Msa0311280:CDS
AGATATCTGTAGAGCTGTTT+GGG 0.367948 2_4:-6133335 Msa0311280:CDS
AAGATATCTGTAGAGCTGTT+TGG 0.368664 2_4:-6133336 Msa0311280:CDS
GCTGTTTGGGACTATGGGTT+TGG 0.369030 2_4:-6133322 Msa0311280:CDS
CCCCATCATTCCACAGTGTA+AGG 0.370588 2_4:-6133613 Msa0311280:CDS
CAACCAAGTCCTGCCATTGA+TGG 0.374788 2_4:-6133762 Msa0311280:CDS
AGAAGAGCATACTCGGATTA+AGG 0.374809 2_4:-6135214 Msa0311280:CDS
TTTGAAGAGGAAATTGAATC+AGG 0.376038 2_4:-6133901 Msa0311280:intron
TCTGCATTTCCTCGTAATAT+TGG 0.377971 2_4:+6135087 None:intergenic
TTCTCAGACTAGCAATTTCC+TGG 0.380055 2_4:+6132390 None:intergenic
GAGAGAAAGGCGAGTAGCTT+TGG 0.383992 2_4:-6132283 Msa0311280:exon
CCCTTACACTGTGGAATGAT+GGG 0.386689 2_4:+6133612 None:intergenic
GTTCATCAATTTCCTCAATT+GGG 0.386900 2_4:+6133721 None:intergenic
TGATTTGTGTAGTTCAATAA+TGG 0.390713 2_4:-6135486 Msa0311280:exon
TCCCTTACACTGTGGAATGA+TGG 0.397453 2_4:+6133611 None:intergenic
AGGACTTTGAAAGCCGAGTT+AGG 0.398394 2_4:-6134032 Msa0311280:CDS
AGGACTTTGAAAGCCGAGTT+AGG 0.398394 2_4:-6134074 Msa0311280:CDS
TCGGATTCAGTTCTTGGATG+TGG 0.399941 2_4:-6132198 Msa0311280:three_prime_UTR
GACTTTGAAAGCCGAGTAAA+GGG 0.402680 2_4:-6134195 Msa0311280:CDS
AATGAAGGACTTGGAGTTAA+CGG 0.408791 2_4:-6134727 Msa0311280:CDS
CAGTGTGACCGACGACTAGA+AGG 0.410719 2_4:-6134657 Msa0311280:CDS
TAGTTCAATAATGGTTGTTA+GGG 0.427649 2_4:-6135477 Msa0311280:exon
GAAATATTGAGATGACATTA+CGG 0.429989 2_4:-6131918 Msa0311280:three_prime_UTR
GTAGAGCTGTTTGGGACTAT+GGG 0.430125 2_4:-6133327 Msa0311280:CDS
AAGGCGAGTAGCTTTGGTAT+TGG 0.430765 2_4:-6132277 Msa0311280:exon
CTCTTTGCTGGCAGTCTAGT+AGG 0.431702 2_4:+6135314 None:intergenic
AACCTTGATTTCAATGGAGT+TGG 0.432488 2_4:+6132515 None:intergenic
TTGATTTGAGTCCCTTCAGT+TGG 0.434408 2_4:+6134436 None:intergenic
GATATTTGAAAGACGGATGA+AGG 0.437782 2_4:-6134406 Msa0311280:CDS
CTGTTTCAAACTTCGTCACT+CGG 0.440261 2_4:+6134145 None:intergenic
AACCAACTCCATTGAAATCA+AGG 0.448934 2_4:-6132517 Msa0311280:intron
TCAAAGACAAGTAGATGATC+TGG 0.452367 2_4:-6134484 Msa0311280:CDS
TTTGCAGTTTCTCCCAATTG+AGG 0.456677 2_4:-6133733 Msa0311280:CDS
CTGATTTGAACTTCCTCACT+CGG 0.460825 2_4:+6134103 None:intergenic
GCCTTTACTATTGCTATCCA+TGG 0.462841 2_4:+6134944 None:intergenic
GTAGCTTTGGTATTGGAAGT+AGG 0.465926 2_4:-6132270 Msa0311280:exon
TCAATCAGTTGATCTATTGC+GGG 0.466433 2_4:-6132586 Msa0311280:CDS
TAATCAAACCCTCGATGAAA+CGG 0.467409 2_4:+6135015 None:intergenic
TACTTACCTTTGTGTGGCTG+AGG 0.468990 2_4:+6136813 None:intergenic
ACTGTGGAATGATGGGGTTC+TGG 0.470582 2_4:+6133619 None:intergenic
GTAATGTCAGAGAGGAGAAC+TGG 0.471534 2_4:-6134762 Msa0311280:CDS
AGGATGACAGTAATGAGAAC+TGG 0.474459 2_4:-6132073 Msa0311280:three_prime_UTR
GTAGTAAATCAATTGAGAAT+AGG 0.475228 2_4:-6135337 Msa0311280:CDS
GCAAATCCAGTACCAGTTCT+GGG 0.480024 2_4:-6133447 Msa0311280:CDS
GCAGGAGGAATTCGAAAGTC+AGG 0.484190 2_4:-6134580 Msa0311280:CDS
GCAATTTGAAAGCCAGGAAA+AGG 0.485355 2_4:-6134532 Msa0311280:CDS
CTCATGAAGAAGAGCATACT+CGG 0.485463 2_4:-6135221 Msa0311280:CDS
CAAATGAGAAGCTCTATAAA+GGG 0.486869 2_4:-6134626 Msa0311280:CDS
CTGCAAACTTCTTCCATCAA+TGG 0.487566 2_4:+6133749 None:intergenic
CTGATTCAAACTTCCTAACT+CGG 0.487972 2_4:+6134019 None:intergenic
GCTTGTTCAAATGAAGGACT+TGG 0.488868 2_4:-6134736 Msa0311280:CDS
AAGTAGGAATGAAATGAGAA+AGG 0.489576 2_4:+6136850 None:intergenic
GAGGAAATGTTGTCATCAAA+AGG 0.489809 2_4:+6135290 None:intergenic
CTGATTCAAACTTCCTAACT+CGG 0.490086 2_4:+6134061 None:intergenic
AAAGAAGCAATTTGAAAGCC+AGG 0.492303 2_4:-6134538 Msa0311280:CDS
GCACATGTCCGTTTCATCGA+GGG 0.494673 2_4:-6135023 Msa0311280:CDS
CGGATTCAGTTCTTGGATGT+GGG 0.495971 2_4:-6132197 Msa0311280:three_prime_UTR
AGGTTTGTAAATGAGACAAC+AGG 0.498929 2_4:-6132237 Msa0311280:three_prime_UTR
GAAGTTTGAATCAGTAGAGA+AGG 0.504108 2_4:-6134052 Msa0311280:CDS
ATCAACTGATTGATTCTTGG+TGG 0.504644 2_4:+6132596 None:intergenic
TTGATTCAAACCCCTTTACT+CGG 0.505676 2_4:+6134184 None:intergenic
TAGCTTTGGTATTGGAAGTA+GGG 0.508548 2_4:-6132269 Msa0311280:three_prime_UTR
GAAGTTTGAATCAGCAGAGA+AGG 0.509904 2_4:-6134010 Msa0311280:CDS
GGACTTTGAAAGCCGAGTAA+AGG 0.510913 2_4:-6134196 Msa0311280:CDS
TAAAGGCCGTGGAAGATTGA+AGG 0.511019 2_4:-6134928 Msa0311280:CDS
GGAGAGTGAACTAAGAAAGT+AGG 0.514540 2_4:+6136834 None:intergenic
GAAGTTCAAATCAGTAGAGA+AGG 0.514891 2_4:-6134094 Msa0311280:CDS
GTTAATAAAATCATTTGAAG+AGG 0.515437 2_4:-6133914 Msa0311280:CDS
TTGATTCAAACTTCTTCACT+CGG 0.515510 2_4:+6133977 None:intergenic
TCAAAATTGAAGCAATATGA+AGG 0.517246 2_4:-6134291 Msa0311280:CDS
TTAACGGAAAAGCAATTTGA+AGG 0.520768 2_4:-6134711 Msa0311280:CDS
ATCAATCAGTTGATCTATTG+CGG 0.522744 2_4:-6132587 Msa0311280:CDS
TCAATATTTCAAAGCAATTG+AGG 0.523088 2_4:+6131931 None:intergenic
CTTGAGCTAAATAGAGAGAA+AGG 0.526158 2_4:-6132296 Msa0311280:CDS
ATCCCTTGAGAGAGATATTG+AGG 0.530827 2_4:-6135168 Msa0311280:CDS
CAACATTTCCTCGCAAACTT+CGG 0.535428 2_4:-6135279 Msa0311280:CDS
TAAAAGAACTAATGTCAGAA+AGG 0.536181 2_4:-6134800 Msa0311280:CDS
AAAGGTGTCGGAGTCAAAGC+AGG 0.537649 2_4:-6134598 Msa0311280:CDS
GAAGTTTGAATCAAAAGAAG+AGG 0.538867 2_4:-6133968 Msa0311280:CDS
TGGTCAGCTTGTTCAAATGA+AGG 0.542980 2_4:-6134742 Msa0311280:CDS
GTTGTCTCATTTACAAACCT+CGG 0.544532 2_4:+6132240 None:intergenic
AGAATTTACTTACCTTTGTG+TGG 0.545621 2_4:+6136807 None:intergenic
ATTCAACCCCTTCTAGTCGT+CGG 0.546192 2_4:+6134649 None:intergenic
TTGATTCGAAGTCCTTCACC+TGG 0.546907 2_4:+6134310 None:intergenic
CTTAAACTGAAAGCTTACAT+TGG 0.548401 2_4:-6133480 Msa0311280:CDS
AGAGTTTAAATCACAAGAGA+AGG 0.548434 2_4:-6134217 Msa0311280:CDS
TCAAAGAGAGAGGAATTTGA+AGG 0.551665 2_4:-6134249 Msa0311280:CDS
GACAATGACTTTGCTCTCAA+AGG 0.551969 2_4:+6135392 None:intergenic
ACTCCTCAATATCTCTCTCA+AGG 0.552126 2_4:+6135165 None:intergenic
TCAGGACAAGGCAAGAGACC+AGG 0.554657 2_4:-6132408 Msa0311280:intron
AAACTTCTTCCATCAATGGC+AGG 0.555447 2_4:+6133753 None:intergenic
AGATAACAATATTGAATCTG+CGG 0.559408 2_4:-6132348 Msa0311280:CDS
AAGAGAAGATATTTGAAAGA+CGG 0.560688 2_4:-6134413 Msa0311280:CDS
ATTGCTTCTTCTCGCACATG+AGG 0.561232 2_4:+6133513 None:intergenic
GCAATATGAAGGACAAGTGA+AGG 0.566613 2_4:-6134280 Msa0311280:CDS
GAAAGCCAGGAAAAGGTGCT+CGG 0.567009 2_4:-6134525 Msa0311280:CDS
AAGCGAAACACTGTATTTGG+TGG 0.570485 2_4:+6136927 None:intergenic
AATTTATGAGAGCAGTTGCA+AGG 0.571174 2_4:-6132541 Msa0311280:CDS
TCAGGAAATTAAGACGAGAA+AGG 0.571467 2_4:-6134862 Msa0311280:CDS
GAAGTTTGAAACAGTAGAGA+AGG 0.571865 2_4:-6134136 Msa0311280:CDS
GGAATTCGAAAGTCAGGTGA+AGG 0.576331 2_4:-6134574 Msa0311280:CDS
GTGATTTAAACTCTTCCACT+CGG 0.576446 2_4:+6134226 None:intergenic
GATAGCAATAGTAAAGGCCG+TGG 0.579238 2_4:-6134939 Msa0311280:CDS
CGGATTAAGGAGCGTTGAGG+AGG 0.584542 2_4:-6135201 Msa0311280:CDS
TTTCTGCCCAGGATTTGAAG+TGG 0.585302 2_4:-6135509 Msa0311280:intron
GAAGGAGTTGAAGTCAAAAG+AGG 0.587532 2_4:-6134388 Msa0311280:CDS
AGCACATGTCCGTTTCATCG+AGG 0.589697 2_4:-6135024 Msa0311280:CDS
CGCACATGAGGTTTAACATG+TGG 0.590019 2_4:+6133525 None:intergenic
CCAATCCATAAATTGACAGA+AGG 0.591953 2_4:+6133415 None:intergenic
GGAGTTACAATCAAAGAGAG+AGG 0.595701 2_4:-6134259 Msa0311280:CDS
GCCATGGATAGCAATAGTAA+AGG 0.596670 2_4:-6134945 Msa0311280:CDS
GAGACAACTTCTTACAGCCA+TGG 0.598031 2_4:-6134961 Msa0311280:CDS
TGACAGTCTAGCTAATCTGC+TGG 0.600004 2_4:-6133682 Msa0311280:CDS
CCCATCATTCCACAGTGTAA+GGG 0.604052 2_4:-6133612 Msa0311280:CDS
CCTTACACTGTGGAATGATG+GGG 0.610080 2_4:+6133613 None:intergenic
CTGATCGAGACACAAGGGGA+AGG 0.618054 2_4:-6132093 Msa0311280:three_prime_UTR
TGGAAGTAGGGCGGTAACCG+AGG 0.620719 2_4:-6132257 Msa0311280:three_prime_UTR
TAAAGGGCAGACAAAGGTGT+CGG 0.621702 2_4:-6134610 Msa0311280:CDS
ACGGAAAAGCAATTTGAAGG+TGG 0.621868 2_4:-6134708 Msa0311280:CDS
CTCCTCAATATCTCTCTCAA+GGG 0.622421 2_4:+6135166 None:intergenic
TAGATTCATTTGTTATAACA+CGG 0.623887 2_4:-6132619 Msa0311280:CDS
AGTGTGACCGACGACTAGAA+GGG 0.627275 2_4:-6134656 Msa0311280:CDS
TTTATCTGATCGAGACACAA+GGG 0.627670 2_4:-6132098 Msa0311280:three_prime_UTR
ATTTATCTGATCGAGACACA+AGG 0.627865 2_4:-6132099 Msa0311280:three_prime_UTR
GAGGAACTTGAGCTAAGAGA+CGG 0.629178 2_4:-6133949 Msa0311280:CDS
AGAGGAATTTGAAGGCCGAG+TGG 0.631001 2_4:-6134241 Msa0311280:CDS
GCTCTATAAAGGGCAGACAA+AGG 0.633152 2_4:-6134616 Msa0311280:CDS
AGATGATCTGGAATCATGCA+AGG 0.638630 2_4:-6134472 Msa0311280:CDS
CACTCTCCTCAGCCACACAA+AGG 0.642678 2_4:-6136819 Msa0311280:intron
CAAATCCAGTACCAGTTCTG+GGG 0.656039 2_4:-6133446 Msa0311280:CDS
GTGTGACCGACGACTAGAAG+GGG 0.661302 2_4:-6134655 Msa0311280:CDS
CATCAAAATGGTACAATACG+AGG 0.667651 2_4:+6132012 None:intergenic
CTACTAGACTGCCAGCAAAG+AGG 0.670048 2_4:-6135313 Msa0311280:CDS
CTTTGGTATTGGAAGTAGGG+CGG 0.670313 2_4:-6132266 Msa0311280:three_prime_UTR
TACTAAATGTAATGTCAGAG+AGG 0.673630 2_4:-6134770 Msa0311280:CDS
AGGACTTTGAAATCCGAGTG+AGG 0.681019 2_4:-6134116 Msa0311280:CDS
ACTTTGAAAGCCGAGTAAAG+GGG 0.687533 2_4:-6134194 Msa0311280:CDS
ACTCGGATTAAGGAGCGTTG+AGG 0.688313 2_4:-6135204 Msa0311280:CDS
GGTGTCGGAGTCAAAGCAGG+AGG 0.695615 2_4:-6134595 Msa0311280:CDS
TTATCTGATCGAGACACAAG+GGG 0.696466 2_4:-6132097 Msa0311280:three_prime_UTR
ATTGATGAACTTGAGTCACA+CGG 0.701580 2_4:-6133708 Msa0311280:CDS
ACGAACTAACCAATATTACG+AGG 0.703439 2_4:-6135096 Msa0311280:CDS
GTTGTTCGAGCAGATCAATG+TGG 0.704073 2_4:+6133562 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAAAAACATTAAAAATTTA+TGG + chr2_4:6132939-6132958 None:intergenic 10.0%
!!! ATCAAATGTATAAATATTTT+TGG - chr2_4:6135668-6135687 Msa0311280:intron 10.0%
!! TTATAAAAAAGTTAGCATAT+TGG - chr2_4:6135814-6135833 Msa0311280:intron 15.0%
!! ATAACATCTCAAAATAAATT+GGG + chr2_4:6136100-6136119 None:intergenic 15.0%
!! AATAACATCTCAAAATAAAT+TGG + chr2_4:6136101-6136120 None:intergenic 15.0%
!!! TTTTATCATTTACATTTCCA+TGG - chr2_4:6132090-6132109 Msa0311280:three_prime_UTR 20.0%
!! TTAAGCCAAAATTTATTGAA+TGG + chr2_4:6132126-6132145 None:intergenic 20.0%
!! ATTTGCAGCTTATATATAAA+CGG + chr2_4:6133230-6133249 None:intergenic 20.0%
!!! ATTAAGTTGTTTATCCAAAA+AGG - chr2_4:6133253-6133272 Msa0311280:intron 20.0%
!!! TTAAGTTGTTTATCCAAAAA+GGG - chr2_4:6133254-6133273 Msa0311280:intron 20.0%
!! GTTAATAAAATCATTTGAAG+AGG - chr2_4:6134920-6134939 Msa0311280:CDS 20.0%
!!! TATCTAAAACATCTTTTGAT+GGG + chr2_4:6135191-6135210 None:intergenic 20.0%
!!! ATATCTAAAACATCTTTTGA+TGG + chr2_4:6135192-6135211 None:intergenic 20.0%
!!! ATGAAGTTTTAAAGCTTTTT+GGG - chr2_4:6135460-6135479 Msa0311280:CDS 20.0%
!!! ACAAATCAGAATTAACTTTT+GGG + chr2_4:6135795-6135814 None:intergenic 20.0%
!!! AACAAATCAGAATTAACTTT+TGG + chr2_4:6135796-6135815 None:intergenic 20.0%
!! ATATATCTTTCTAATTCAAG+TGG - chr2_4:6135869-6135888 Msa0311280:intron 20.0%
!! TAACATCTCAAAATAAATTG+GGG + chr2_4:6136099-6136118 None:intergenic 20.0%
!!! TAGATTCATTTGTTATAACA+CGG - chr2_4:6136215-6136234 Msa0311280:intron 20.0%
!! AAAAAAAACCTTGATTTCAA+TGG + chr2_4:6136328-6136347 None:intergenic 20.0%
!!! GATAGATAGTATTCTAATTT+TGG - chr2_4:6136662-6136681 Msa0311280:intron 20.0%
!!! ATAGTATTCTAATTTTGGAA+TGG - chr2_4:6136667-6136686 Msa0311280:intron 20.0%
!! TCATAATCAAAACATCAAAA+TGG + chr2_4:6136837-6136856 None:intergenic 20.0%
!! AGCATCCATTCAATAAATTT+TGG - chr2_4:6132118-6132137 Msa0311280:three_prime_UTR 25.0%
! CTGTTACAAAACAAACTTAA+AGG + chr2_4:6132804-6132823 None:intergenic 25.0%
!!! AAGTTTGTTTTGTAACAGAT+AGG - chr2_4:6132195-6132214 Msa0311280:three_prime_UTR 25.0%
! GTTACAAACATCAAACTTAA+AGG + chr2_4:6132222-6132241 None:intergenic 25.0%
! GTTTGATGTTTGTAACATAT+AGG - chr2_4:6132226-6132245 Msa0311280:three_prime_UTR 25.0%
! CTGTTACAAAACAAACTTAA+AGG + chr2_4:6132804-6132823 None:intergenic 25.0%
! CTGATTCTTCAAAAAAAACT+GGG + chr2_4:6132386-6132405 None:intergenic 25.0%
! GAGTTGAGTATATTTATCAT+CGG + chr2_4:6132531-6132550 None:intergenic 25.0%
!! AGCTTTGGTATGAATAAAAA+TGG - chr2_4:6132642-6132661 Msa0311280:CDS 25.0%
! TATGAATAAAAATGGAGTCA+GGG - chr2_4:6132650-6132669 Msa0311280:CDS 25.0%
!!! AAGTTTGTTTTGTAACAGAT+AGG + chr2_4:6132195-6132214 None:intergenic 25.0%
! CTGTTACAAAACAAACTTAA+AGG - chr2_4:6132804-6132823 Msa0311280:intron 25.0%
!! AAGTTTGTTTAGTAACAGAT+AGG + chr2_4:6132862-6132881 None:intergenic 25.0%
! CTGTTACTAAACAAACTTAA+AGG - chr2_4:6132864-6132883 Msa0311280:intron 25.0%
!! TGATTTGTGTAGTTCAATAA+TGG - chr2_4:6133348-6133367 Msa0311280:CDS 25.0%
! TAGTTCAATAATGGTTGTTA+GGG - chr2_4:6133357-6133376 Msa0311280:CDS 25.0%
! TCATTGTCAACTTTGAATTT+GGG - chr2_4:6133457-6133476 Msa0311280:CDS 25.0%
! GTAGTAAATCAATTGAGAAT+AGG - chr2_4:6133497-6133516 Msa0311280:CDS 25.0%
!! TTTCTTATTTAGAAGCTCTT+TGG + chr2_4:6133698-6133717 None:intergenic 25.0%
! TAAAAGAACTAATGTCAGAA+AGG - chr2_4:6134034-6134053 Msa0311280:CDS 25.0%
! AAGAGAAGATATTTGAAAGA+CGG - chr2_4:6134421-6134440 Msa0311280:CDS 25.0%
! TCAAAATTGAAGCAATATGA+AGG - chr2_4:6134543-6134562 Msa0311280:CDS 25.0%
!!! GATGAAGTTTTAAAGCTTTT+TGG - chr2_4:6135459-6135478 Msa0311280:CDS 25.0%
!! AAATCAGAATTAACTTTTGG+GGG + chr2_4:6135793-6135812 None:intergenic 25.0%
!! CAAATCAGAATTAACTTTTG+GGG + chr2_4:6135794-6135813 None:intergenic 25.0%
! TGGTTAAAGAGTTTCAATTA+AGG - chr2_4:6135889-6135908 Msa0311280:intron 25.0%
!!! CATATGTGCTGTTTTTTTAA+TGG - chr2_4:6136052-6136071 Msa0311280:intron 25.0%
! AGATAACAATATTGAATCTG+CGG - chr2_4:6136486-6136505 Msa0311280:intron 25.0%
! AACAAACTGATGTAAAAATC+TGG - chr2_4:6136792-6136811 Msa0311280:intron 25.0%
! TCAATATTTCAAAGCAATTG+AGG + chr2_4:6136906-6136925 None:intergenic 25.0%
! GAAATATTGAGATGACATTA+CGG - chr2_4:6136916-6136935 Msa0311280:five_prime_UTR 25.0%
AAGTAGGAATGAAATGAGAA+AGG + chr2_4:6131987-6132006 None:intergenic 30.0%
AGAATTTACTTACCTTTGTG+TGG + chr2_4:6132030-6132049 None:intergenic 30.0%
GTTACAAACGTCAAACTTAA+AGG + chr2_4:6132835-6132854 None:intergenic 30.0%
GTTTGACGTTTGTAACATAT+AGG - chr2_4:6132166-6132185 Msa0311280:three_prime_UTR 30.0%
AAAAAAACTGGGTGTAGTAA+AGG + chr2_4:6132375-6132394 None:intergenic 30.0%
CCTGATTCTTCAAAAAAAAC+TGG + chr2_4:6132387-6132406 None:intergenic 30.0%
!!! CCAGTTTTTTTTGAAGAATC+AGG - chr2_4:6132384-6132403 Msa0311280:CDS 30.0%
AATAATGCTGGTATTACACT+TGG - chr2_4:6132596-6132615 Msa0311280:CDS 30.0%
GTATGAATAAAAATGGAGTC+AGG - chr2_4:6132649-6132668 Msa0311280:CDS 30.0%
GTTACAAACGTCAAACTTAA+AGG - chr2_4:6132835-6132854 Msa0311280:intron 30.0%
GTTTGACGTTTGTAACATAT+AGG + chr2_4:6132166-6132185 None:intergenic 30.0%
GTTACAAACGTCAAACTTAA+AGG - chr2_4:6132835-6132854 Msa0311280:intron 30.0%
TATCAATCACAAATCAGCTA+GGG + chr2_4:6132988-6133007 None:intergenic 30.0%
! ATTAGTCTAAGAAAACATGG+GGG + chr2_4:6133017-6133036 None:intergenic 30.0%
! CATTAGTCTAAGAAAACATG+GGG + chr2_4:6133018-6133037 None:intergenic 30.0%
! GCATTAGTCTAAGAAAACAT+GGG + chr2_4:6133019-6133038 None:intergenic 30.0%
! TGCATTAGTCTAAGAAAACA+TGG + chr2_4:6133020-6133039 None:intergenic 30.0%
CTTATAACATGAGATCTGTT+TGG - chr2_4:6133054-6133073 Msa0311280:intron 30.0%
! TCAACTATTAAGACCCTTTT+TGG + chr2_4:6133270-6133289 None:intergenic 30.0%
GTAGTTCAATAATGGTTGTT+AGG - chr2_4:6133356-6133375 Msa0311280:CDS 30.0%
GTCATTGTCAACTTTGAATT+TGG - chr2_4:6133456-6133475 Msa0311280:CDS 30.0%
ATGCAGAACAAAATCGAAAA+AGG - chr2_4:6133763-6133782 Msa0311280:CDS 30.0%
AAAAATTGCTGAATGTACTC+AGG - chr2_4:6133954-6133973 Msa0311280:CDS 30.0%
TACTAAATGTAATGTCAGAG+AGG - chr2_4:6134064-6134083 Msa0311280:CDS 30.0%
TTAACGGAAAAGCAATTTGA+AGG - chr2_4:6134123-6134142 Msa0311280:CDS 30.0%
TCAAATGAGAAGCTCTATAA+AGG - chr2_4:6134207-6134226 Msa0311280:CDS 30.0%
CAAATGAGAAGCTCTATAAA+GGG - chr2_4:6134208-6134227 Msa0311280:CDS 30.0%
!! TTAAGAGAGTGTGATTTTGA+AGG - chr2_4:6134501-6134520 Msa0311280:CDS 30.0%
AGAGTTTAAATCACAAGAGA+AGG - chr2_4:6134617-6134636 Msa0311280:CDS 30.0%
AAAGGGGTTTGAATCAAAAA+AGG - chr2_4:6134656-6134675 Msa0311280:CDS 30.0%
TTGATTCAAACTTCTTCACT+CGG + chr2_4:6134860-6134879 None:intergenic 30.0%
GAAGTTTGAATCAAAAGAAG+AGG - chr2_4:6134866-6134885 Msa0311280:CDS 30.0%
TTTGAAGAGGAAATTGAATC+AGG - chr2_4:6134933-6134952 Msa0311280:CDS 30.0%
GATGAAATTGCATAATTAGC+TGG + chr2_4:6135039-6135058 None:intergenic 30.0%
GTTCATCAATTTCCTCAATT+GGG + chr2_4:6135116-6135135 None:intergenic 30.0%
AGTTCATCAATTTCCTCAAT+TGG + chr2_4:6135117-6135136 None:intergenic 30.0%
CTTAAACTGAAAGCTTACAT+TGG - chr2_4:6135354-6135373 Msa0311280:CDS 30.0%
CAATGTGAAGAAAGACAAAA+AGG + chr2_4:6135594-6135613 None:intergenic 30.0%
! TCATTTTCTTATCACTTCTC+AGG - chr2_4:6135625-6135644 Msa0311280:intron 30.0%
! CATTTTCTTATCACTTCTCA+GGG - chr2_4:6135626-6135645 Msa0311280:intron 30.0%
ACTAAGAAATTGAACTGATG+TGG - chr2_4:6135722-6135741 Msa0311280:intron 30.0%
AAATTGAACTGATGTGGAAT+TGG - chr2_4:6135728-6135747 Msa0311280:intron 30.0%
TCAATTAAGGACGAATCATT+TGG - chr2_4:6135902-6135921 Msa0311280:intron 30.0%
CAATTAAGGACGAATCATTT+GGG - chr2_4:6135903-6135922 Msa0311280:intron 30.0%
ATATAAGAAAAGCTTGACCA+AGG + chr2_4:6135961-6135980 None:intergenic 30.0%
! GTCAAGCTTTTCTTATATCT+TGG - chr2_4:6135963-6135982 Msa0311280:intron 30.0%
!!! GCACATATGCATAGTTTTTT+TGG + chr2_4:6136041-6136060 None:intergenic 30.0%
!!! GCTGTTTTTTTAATGGTTTG+AGG - chr2_4:6136059-6136078 Msa0311280:intron 30.0%
ACTTCATCAAACTAACATAC+GGG + chr2_4:6136127-6136146 None:intergenic 30.0%
CACTTCATCAAACTAACATA+CGG + chr2_4:6136128-6136147 None:intergenic 30.0%
! TAGATCAACTGATTGATTCT+TGG + chr2_4:6136244-6136263 None:intergenic 30.0%
ATCAATCAGTTGATCTATTG+CGG - chr2_4:6136247-6136266 Msa0311280:intron 30.0%
!!! TTCATTTTGAAATCAGGACA+AGG - chr2_4:6136414-6136433 Msa0311280:intron 30.0%
!!! GCTAACTCTTTTGTTTTTGT+TGG + chr2_4:6136884-6136903 None:intergenic 30.0%
CAAATACAGTGTTTCGCTTT+GGG - chr2_4:6131911-6131930 Msa0311280:three_prime_UTR 35.0%
!!! TGAATGGATGCTATTTTCCA+TGG + chr2_4:6132110-6132129 None:intergenic 35.0%
!!! TTTTGGCTTAATTACACCAC+AGG - chr2_4:6132135-6132154 Msa0311280:three_prime_UTR 35.0%
! TTTTACGGTGAGTTAACAGA+AGG + chr2_4:6132744-6132763 None:intergenic 35.0%
!!! TCACGTCAGCGTTTTTTTTA+CGG + chr2_4:6132328-6132347 None:intergenic 35.0%
AACTGTTGTCTTCTTTCCTT+CGG + chr2_4:6132419-6132438 None:intergenic 35.0%
ACCACACGAAATCTAATTGT+TGG - chr2_4:6132441-6132460 Msa0311280:intron 35.0%
TCCAACAATTAGATTTCGTG+TGG + chr2_4:6132445-6132464 None:intergenic 35.0%
! TGCAATGTACTTGGTAATCT+TGG + chr2_4:6132484-6132503 None:intergenic 35.0%
GATTACCAAGTACATTGCAA+AGG - chr2_4:6132485-6132504 Msa0311280:intron 35.0%
TATTGCCTTTGCAATGTACT+TGG + chr2_4:6132493-6132512 None:intergenic 35.0%
TAATACCAGCATTATTGCAG+GGG + chr2_4:6132592-6132611 None:intergenic 35.0%
GTAATACCAGCATTATTGCA+GGG + chr2_4:6132593-6132612 None:intergenic 35.0%
TGTAATACCAGCATTATTGC+AGG + chr2_4:6132594-6132613 None:intergenic 35.0%
GCTTGAATTCGTCAAATCAA+TGG + chr2_4:6132625-6132644 None:intergenic 35.0%
GATTTGACGAATTCAAGCTT+TGG - chr2_4:6132627-6132646 Msa0311280:CDS 35.0%
TTGAGAATTGGGGAAATGTA+AGG - chr2_4:6132674-6132693 Msa0311280:intron 35.0%
TGAGAATTGGGGAAATGTAA+GGG - chr2_4:6132675-6132694 Msa0311280:intron 35.0%
!!! CACGTCAGCGTTTTTTTTTA+CGG - chr2_4:6132729-6132748 Msa0311280:intron 35.0%
GCACACTGTTACAAAGTTAA+AGG - chr2_4:6132775-6132794 Msa0311280:intron 35.0%
GTTTGACGTTTGTAACATAC+AGG + chr2_4:6132831-6132850 None:intergenic 35.0%
TTATGGCTTAATTACACCAC+AGG + chr2_4:6132922-6132941 None:intergenic 35.0%
CTATCAATCACAAATCAGCT+AGG + chr2_4:6132989-6133008 None:intergenic 35.0%
GTTCGCTCAAATAGTATCAA+AGG + chr2_4:6133116-6133135 None:intergenic 35.0%
!!! TCTTTTTTCTTTTTCTGCCC+AGG - chr2_4:6133314-6133333 Msa0311280:CDS 35.0%
AAATCACCACTTCAAATCCT+GGG + chr2_4:6133334-6133353 None:intergenic 35.0%
GAGGAAATGTTGTCATCAAA+AGG + chr2_4:6133547-6133566 None:intergenic 35.0%
!!! TTTTTTAACCGAAGTTTGCG+AGG + chr2_4:6133566-6133585 None:intergenic 35.0%
ACGAACTAACCAATATTACG+AGG - chr2_4:6133738-6133757 Msa0311280:CDS 35.0%
TCTGCATTTCCTCGTAATAT+TGG + chr2_4:6133750-6133769 None:intergenic 35.0%
TAATCAAACCCTCGATGAAA+CGG + chr2_4:6133822-6133841 None:intergenic 35.0%
! CTTTTTCCTTCAATCTTCCA+CGG + chr2_4:6133915-6133934 None:intergenic 35.0%
TCAGGAAATTAAGACGAGAA+AGG - chr2_4:6133972-6133991 Msa0311280:CDS 35.0%
AATGAAGGACTTGGAGTTAA+CGG - chr2_4:6134107-6134126 Msa0311280:CDS 35.0%
AAAGAAGCAATTTGAAAGCC+AGG - chr2_4:6134296-6134315 Msa0311280:CDS 35.0%
TCAAAGACAAGTAGATGATC+TGG - chr2_4:6134350-6134369 Msa0311280:CDS 35.0%
!! CATTTTGAAAGCCAACTGAA+GGG - chr2_4:6134387-6134406 Msa0311280:CDS 35.0%
GATATTTGAAAGACGGATGA+AGG - chr2_4:6134428-6134447 Msa0311280:CDS 35.0%
TCAAAGAGAGAGGAATTTGA+AGG - chr2_4:6134585-6134604 Msa0311280:CDS 35.0%
GTGATTTAAACTCTTCCACT+CGG + chr2_4:6134611-6134630 None:intergenic 35.0%
TTGATTCAAACCCCTTTACT+CGG + chr2_4:6134653-6134672 None:intergenic 35.0%
! GAAGTTTGAAACAGTAGAGA+AGG - chr2_4:6134698-6134717 Msa0311280:CDS 35.0%
GAAGTTCAAATCAGTAGAGA+AGG - chr2_4:6134740-6134759 Msa0311280:CDS 35.0%
CTGATTCAAACTTCCTAACT+CGG + chr2_4:6134776-6134795 None:intergenic 35.0%
GAAGTTTGAATCAGTAGAGA+AGG - chr2_4:6134782-6134801 Msa0311280:CDS 35.0%
CTGATTCAAACTTCCTAACT+CGG + chr2_4:6134776-6134795 None:intergenic 35.0%
ATTGATGAACTTGAGTCACA+CGG - chr2_4:6135126-6135145 Msa0311280:CDS 35.0%
TTGCTCCTTCTGTCAATTTA+TGG - chr2_4:6135414-6135433 Msa0311280:CDS 35.0%
CCAATCCATAAATTGACAGA+AGG + chr2_4:6135422-6135441 None:intergenic 35.0%
CCTTCTGTCAATTTATGGAT+TGG - chr2_4:6135419-6135438 Msa0311280:CDS 35.0%
AAGATATCTGTAGAGCTGTT+TGG - chr2_4:6135498-6135517 Msa0311280:five_prime_UTR 35.0%
AGATATCTGTAGAGCTGTTT+GGG - chr2_4:6135499-6135518 Msa0311280:five_prime_UTR 35.0%
!!! TTTTTTTGGTCGTAACACTC+CGG + chr2_4:6136027-6136046 None:intergenic 35.0%
GATTCTGAACTAAATCTGCA+AGG + chr2_4:6136164-6136183 None:intergenic 35.0%
! ATCAACTGATTGATTCTTGG+TGG + chr2_4:6136241-6136260 None:intergenic 35.0%
TCAATCAGTTGATCTATTGC+GGG - chr2_4:6136248-6136267 Msa0311280:intron 35.0%
AATTTATGAGAGCAGTTGCA+AGG - chr2_4:6136293-6136312 Msa0311280:intron 35.0%
AACCAACTCCATTGAAATCA+AGG - chr2_4:6136317-6136336 Msa0311280:intron 35.0%
AACCTTGATTTCAATGGAGT+TGG + chr2_4:6136322-6136341 None:intergenic 35.0%
CTTGAGCTAAATAGAGAGAA+AGG - chr2_4:6136538-6136557 Msa0311280:intron 35.0%
!! TAGCTTTGGTATTGGAAGTA+GGG - chr2_4:6136565-6136584 Msa0311280:intron 35.0%
GTTGTCTCATTTACAAACCT+CGG + chr2_4:6136597-6136616 None:intergenic 35.0%
AGGTTTGTAAATGAGACAAC+AGG - chr2_4:6136597-6136616 Msa0311280:intron 35.0%
! AGGATTCTGCGTTAAGTTTT+CGG - chr2_4:6136617-6136636 Msa0311280:intron 35.0%
! AAGTTTTCGGATTCAGTTCT+TGG - chr2_4:6136630-6136649 Msa0311280:intron 35.0%
ATTTATCTGATCGAGACACA+AGG - chr2_4:6136735-6136754 Msa0311280:intron 35.0%
TTTATCTGATCGAGACACAA+GGG - chr2_4:6136736-6136755 Msa0311280:intron 35.0%
CATCAAAATGGTACAATACG+AGG + chr2_4:6136825-6136844 None:intergenic 35.0%
CCAAAGCGAAACACTGTATT+TGG + chr2_4:6131913-6131932 None:intergenic 40.0%
CCAAATACAGTGTTTCGCTT+TGG - chr2_4:6131910-6131929 Msa0311280:three_prime_UTR 40.0%
GGAGAGTGAACTAAGAAAGT+AGG + chr2_4:6132003-6132022 None:intergenic 40.0%
GCACACTGTTACAGAGTTAA+AGG + chr2_4:6132282-6132301 None:intergenic 40.0%
AATCAGGAGAAGATAACCGA+AGG - chr2_4:6132400-6132419 Msa0311280:CDS 40.0%
TTGGGGAAATGTAAGGGTAA+AGG - chr2_4:6132681-6132700 Msa0311280:intron 40.0%
CGTAAAAAAAAACGCTGACG+TGG + chr2_4:6132731-6132750 None:intergenic 40.0%
TTTGAGCGAACTTATGAAGC+TGG - chr2_4:6133125-6133144 Msa0311280:intron 40.0%
CAAATCACCACTTCAAATCC+TGG + chr2_4:6133335-6133354 None:intergenic 40.0%
GACAATGACTTTGCTCTCAA+AGG + chr2_4:6133445-6133464 None:intergenic 40.0%
CAACATTTCCTCGCAAACTT+CGG - chr2_4:6133555-6133574 Msa0311280:CDS 40.0%
GCTCTTCTTCATGAGCTTAA+TGG + chr2_4:6133608-6133627 None:intergenic 40.0%
! CTCATGAAGAAGAGCATACT+CGG - chr2_4:6133613-6133632 Msa0311280:CDS 40.0%
! AGAAGAGCATACTCGGATTA+AGG - chr2_4:6133620-6133639 Msa0311280:CDS 40.0%
ATCCCTTGAGAGAGATATTG+AGG - chr2_4:6133666-6133685 Msa0311280:CDS 40.0%
CTCCTCAATATCTCTCTCAA+GGG + chr2_4:6133671-6133690 None:intergenic 40.0%
ACTCCTCAATATCTCTCTCA+AGG + chr2_4:6133672-6133691 None:intergenic 40.0%
GCCATGGATAGCAATAGTAA+AGG - chr2_4:6133889-6133908 Msa0311280:intron 40.0%
GCCTTTACTATTGCTATCCA+TGG + chr2_4:6133893-6133912 None:intergenic 40.0%
! TGGTCAGCTTGTTCAAATGA+AGG - chr2_4:6134092-6134111 Msa0311280:CDS 40.0%
GCTTGTTCAAATGAAGGACT+TGG - chr2_4:6134098-6134117 Msa0311280:CDS 40.0%
ACGGAAAAGCAATTTGAAGG+TGG - chr2_4:6134126-6134145 Msa0311280:CDS 40.0%
GCAATTTGAAAGCCAGGAAA+AGG - chr2_4:6134302-6134321 Msa0311280:CDS 40.0%
! AGATGATCTGGAATCATGCA+AGG - chr2_4:6134362-6134381 Msa0311280:CDS 40.0%
!! GCATTTTGAAAGCCAACTGA+AGG - chr2_4:6134386-6134405 Msa0311280:CDS 40.0%
! TTGATTTGAGTCCCTTCAGT+TGG + chr2_4:6134401-6134420 None:intergenic 40.0%
GAAGGAGTTGAAGTCAAAAG+AGG - chr2_4:6134446-6134465 Msa0311280:CDS 40.0%
! ACGTTTTCAAAGACGAGTGA+AGG - chr2_4:6134470-6134489 Msa0311280:CDS 40.0%
GCAATATGAAGGACAAGTGA+AGG - chr2_4:6134554-6134573 Msa0311280:CDS 40.0%
GGAGTTACAATCAAAGAGAG+AGG - chr2_4:6134575-6134594 Msa0311280:CDS 40.0%
! GACTTTGAAAGCCGAGTAAA+GGG - chr2_4:6134639-6134658 Msa0311280:CDS 40.0%
! ACTTTGAAAGCCGAGTAAAG+GGG - chr2_4:6134640-6134659 Msa0311280:CDS 40.0%
CTGTTTCAAACTTCGTCACT+CGG + chr2_4:6134692-6134711 None:intergenic 40.0%
! CTGATTTGAACTTCCTCACT+CGG + chr2_4:6134734-6134753 None:intergenic 40.0%
GAAGTTTGAATCAGCAGAGA+AGG - chr2_4:6134824-6134843 Msa0311280:CDS 40.0%
AAACTTCTTCCATCAATGGC+AGG + chr2_4:6135084-6135103 None:intergenic 40.0%
CTGCAAACTTCTTCCATCAA+TGG + chr2_4:6135088-6135107 None:intergenic 40.0%
TTTGCAGTTTCTCCCAATTG+AGG - chr2_4:6135101-6135120 Msa0311280:CDS 40.0%
! ACATTTTCTCCCTTACACTG+TGG + chr2_4:6135234-6135253 None:intergenic 40.0%
GGTTTGGCACATAAAGTTTC+TGG - chr2_4:6135528-6135547 Msa0311280:intron 40.0%
TTCTTATCACTTCTCAGGGT+AGG - chr2_4:6135630-6135649 Msa0311280:intron 40.0%
! AGCATTCGAGTTCGAATCTT+GGG - chr2_4:6135926-6135945 Msa0311280:intron 40.0%
ATCTTGGGAAGAACAATCCT+TGG - chr2_4:6135941-6135960 Msa0311280:intron 40.0%
CTTATATCTTGGTCGAACTC+TGG - chr2_4:6135974-6135993 Msa0311280:intron 40.0%
! TACCAAAACCCTTTTCCCTT+AGG - chr2_4:6135999-6136018 Msa0311280:intron 40.0%
! TTCCTAAGGGAAAAGGGTTT+TGG + chr2_4:6136004-6136023 None:intergenic 40.0%
TTCTCAGACTAGCAATTTCC+TGG + chr2_4:6136447-6136466 None:intergenic 40.0%
!! GTAGCTTTGGTATTGGAAGT+AGG - chr2_4:6136564-6136583 Msa0311280:intron 40.0%
TTATCTGATCGAGACACAAG+GGG - chr2_4:6136737-6136756 Msa0311280:intron 40.0%
AGGATGACAGTAATGAGAAC+TGG - chr2_4:6136761-6136780 Msa0311280:intron 40.0%
TACTTACCTTTGTGTGGCTG+AGG + chr2_4:6132024-6132043 None:intergenic 45.0%
CGTCAAACTTAAAGGACCTG+TGG + chr2_4:6132903-6132922 None:intergenic 45.0%
TTCTTCCCCTGCAATAATGC+TGG - chr2_4:6132584-6132603 Msa0311280:CDS 45.0%
TGGAGTCAGGGTTTGAGAAT+TGG - chr2_4:6132662-6132681 Msa0311280:CDS 45.0%
GGAGTCAGGGTTTGAGAATT+GGG - chr2_4:6132663-6132682 Msa0311280:CDS 45.0%
GAGTCAGGGTTTGAGAATTG+GGG - chr2_4:6132664-6132683 Msa0311280:CDS 45.0%
CGTCAAACTTAAAGGACCTG+TGG - chr2_4:6132903-6132922 Msa0311280:intron 45.0%
TTTCTGCCCAGGATTTGAAG+TGG - chr2_4:6133325-6133344 Msa0311280:CDS 45.0%
TCATCAAAAGGCCTCTTTGC+TGG + chr2_4:6133535-6133554 None:intergenic 45.0%
GAGACAACTTCTTACAGCCA+TGG - chr2_4:6133873-6133892 Msa0311280:intron 45.0%
GATAGCAATAGTAAAGGCCG+TGG - chr2_4:6133895-6133914 Msa0311280:intron 45.0%
TAAAGGCCGTGGAAGATTGA+AGG - chr2_4:6133906-6133925 Msa0311280:CDS 45.0%
GTAATGTCAGAGAGGAGAAC+TGG - chr2_4:6134072-6134091 Msa0311280:CDS 45.0%
! TCGGTCACACTGCTTCATTT+TGG + chr2_4:6134169-6134188 None:intergenic 45.0%
ATTCAACCCCTTCTAGTCGT+CGG + chr2_4:6134188-6134207 None:intergenic 45.0%
GCTCTATAAAGGGCAGACAA+AGG - chr2_4:6134218-6134237 Msa0311280:CDS 45.0%
! TAAAGGGCAGACAAAGGTGT+CGG - chr2_4:6134224-6134243 Msa0311280:CDS 45.0%
GGAATTCGAAAGTCAGGTGA+AGG - chr2_4:6134260-6134279 Msa0311280:CDS 45.0%
! TTAATCCGAGCACCTTTTCC+TGG + chr2_4:6134317-6134336 None:intergenic 45.0%
!! AGAGTGTGATTTTGAAGGCC+AGG - chr2_4:6134506-6134525 Msa0311280:CDS 45.0%
!! TGATTTTGAAGGCCAGGTGA+AGG - chr2_4:6134512-6134531 Msa0311280:CDS 45.0%
! TTGATTCGAAGTCCTTCACC+TGG + chr2_4:6134527-6134546 None:intergenic 45.0%
! GGACTTTGAAAGCCGAGTAA+AGG - chr2_4:6134638-6134657 Msa0311280:CDS 45.0%
!! AGGACTTTGAAATCCGAGTG+AGG - chr2_4:6134718-6134737 Msa0311280:CDS 45.0%
! AGGACTTTGAAAGCCGAGTT+AGG - chr2_4:6134760-6134779 Msa0311280:CDS 45.0%
! AGGACTTTGAAAGCCGAGTT+AGG - chr2_4:6134760-6134779 Msa0311280:CDS 45.0%
GAGGAACTTGAGCTAAGAGA+CGG - chr2_4:6134885-6134904 Msa0311280:CDS 45.0%
TGACAGTCTAGCTAATCTGC+TGG - chr2_4:6135152-6135171 Msa0311280:CDS 45.0%
CCTTACACTGTGGAATGATG+GGG + chr2_4:6135224-6135243 None:intergenic 45.0%
CCCTTACACTGTGGAATGAT+GGG + chr2_4:6135225-6135244 None:intergenic 45.0%
CCCATCATTCCACAGTGTAA+GGG - chr2_4:6135222-6135241 Msa0311280:CDS 45.0%
TCCCTTACACTGTGGAATGA+TGG + chr2_4:6135226-6135245 None:intergenic 45.0%
GTTGTTCGAGCAGATCAATG+TGG + chr2_4:6135275-6135294 None:intergenic 45.0%
CGCACATGAGGTTTAACATG+TGG + chr2_4:6135312-6135331 None:intergenic 45.0%
ATTGCTTCTTCTCGCACATG+AGG + chr2_4:6135324-6135343 None:intergenic 45.0%
TGCAAATCCAGTACCAGTTC+TGG - chr2_4:6135386-6135405 Msa0311280:CDS 45.0%
GCAAATCCAGTACCAGTTCT+GGG - chr2_4:6135387-6135406 Msa0311280:CDS 45.0%
CAAATCCAGTACCAGTTCTG+GGG - chr2_4:6135388-6135407 Msa0311280:CDS 45.0%
AAAAACCCCAGAACTGGTAC+TGG + chr2_4:6135396-6135415 None:intergenic 45.0%
! TGTAGAGCTGTTTGGGACTA+TGG - chr2_4:6135506-6135525 Msa0311280:intron 45.0%
! GTAGAGCTGTTTGGGACTAT+GGG - chr2_4:6135507-6135526 Msa0311280:intron 45.0%
TCAGGGTAGGTTACATCAAG+TGG - chr2_4:6135643-6135662 Msa0311280:intron 45.0%
! GAGCATTCGAGTTCGAATCT+TGG - chr2_4:6135925-6135944 Msa0311280:intron 45.0%
! AACCCTTTTCCCTTAGGAAC+CGG - chr2_4:6136005-6136024 Msa0311280:intron 45.0%
GAACTAAATCTGCAAGGTGC+AGG + chr2_4:6136158-6136177 None:intergenic 45.0%
AACATGCAGGTGCATGAAGA+TGG + chr2_4:6136381-6136400 None:intergenic 45.0%
!! AAGGCGAGTAGCTTTGGTAT+TGG - chr2_4:6136557-6136576 Msa0311280:intron 45.0%
! CTTTGGTATTGGAAGTAGGG+CGG - chr2_4:6136568-6136587 Msa0311280:intron 45.0%
TCGGATTCAGTTCTTGGATG+TGG - chr2_4:6136636-6136655 Msa0311280:intron 45.0%
CGGATTCAGTTCTTGGATGT+GGG - chr2_4:6136637-6136656 Msa0311280:intron 45.0%
!! ATGATAAAAAAAAAAAAAAA+AGG + chr2_4:6132079-6132098 None:intergenic 5.0%
TTATTGCAGGGGAAGAACGC+AGG + chr2_4:6132581-6132600 None:intergenic 50.0%
CTCTTTGCTGGCAGTCTAGT+AGG + chr2_4:6133523-6133542 None:intergenic 50.0%
CTACTAGACTGCCAGCAAAG+AGG - chr2_4:6133521-6133540 Msa0311280:CDS 50.0%
!! ACTCGGATTAAGGAGCGTTG+AGG - chr2_4:6133630-6133649 Msa0311280:CDS 50.0%
AGCACATGTCCGTTTCATCG+AGG - chr2_4:6133810-6133829 Msa0311280:intron 50.0%
GCACATGTCCGTTTCATCGA+GGG - chr2_4:6133811-6133830 Msa0311280:intron 50.0%
AGTGTGACCGACGACTAGAA+GGG - chr2_4:6134178-6134197 Msa0311280:CDS 50.0%
!! AAAGGTGTCGGAGTCAAAGC+AGG - chr2_4:6134236-6134255 Msa0311280:CDS 50.0%
GCAGGAGGAATTCGAAAGTC+AGG - chr2_4:6134254-6134273 Msa0311280:CDS 50.0%
!! GAAAGCCAGGAAAAGGTGCT+CGG - chr2_4:6134309-6134328 Msa0311280:CDS 50.0%
AGAGGAATTTGAAGGCCGAG+TGG - chr2_4:6134593-6134612 Msa0311280:CDS 50.0%
CAACCAAGTCCTGCCATTGA+TGG - chr2_4:6135072-6135091 Msa0311280:CDS 50.0%
CTTCCATCAATGGCAGGACT+TGG + chr2_4:6135078-6135097 None:intergenic 50.0%
! ACTGTGGAATGATGGGGTTC+TGG + chr2_4:6135218-6135237 None:intergenic 50.0%
CCCCATCATTCCACAGTGTA+AGG - chr2_4:6135221-6135240 Msa0311280:CDS 50.0%
AGGAGCAAAAACCCCAGAAC+TGG + chr2_4:6135402-6135421 None:intergenic 50.0%
! GCTGTTTGGGACTATGGGTT+TGG - chr2_4:6135512-6135531 Msa0311280:intron 50.0%
CTCCGGTTCCTAAGGGAAAA+GGG + chr2_4:6136010-6136029 None:intergenic 50.0%
ACTCCGGTTCCTAAGGGAAA+AGG + chr2_4:6136011-6136030 None:intergenic 50.0%
CGTAACACTCCGGTTCCTAA+GGG + chr2_4:6136017-6136036 None:intergenic 50.0%
TCGTAACACTCCGGTTCCTA+AGG + chr2_4:6136018-6136037 None:intergenic 50.0%
GAGAGAAAGGCGAGTAGCTT+TGG - chr2_4:6136551-6136570 Msa0311280:intron 50.0%
CACTCTCCTCAGCCACACAA+AGG - chr2_4:6132015-6132034 Msa0311280:three_prime_UTR 55.0%
!! CGGATTAAGGAGCGTTGAGG+AGG - chr2_4:6133633-6133652 Msa0311280:CDS 55.0%
CAGTGTGACCGACGACTAGA+AGG - chr2_4:6134177-6134196 Msa0311280:CDS 55.0%
GTGTGACCGACGACTAGAAG+GGG - chr2_4:6134179-6134198 Msa0311280:CDS 55.0%
TCAGGACAAGGCAAGAGACC+AGG - chr2_4:6136426-6136445 Msa0311280:intron 55.0%
CTGATCGAGACACAAGGGGA+AGG - chr2_4:6136741-6136760 Msa0311280:intron 55.0%
! GGTGTCGGAGTCAAAGCAGG+AGG - chr2_4:6134239-6134258 Msa0311280:CDS 60.0%
TGGAAGTAGGGCGGTAACCG+AGG - chr2_4:6136577-6136596 Msa0311280:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 6131909 6136947 6131909 ID=Msa0311280;Name=Msa0311280
chr2_4 mRNA 6131909 6136947 6131909 ID=Msa0311280-mRNA-1;Parent=Msa0311280;Name=Msa0311280-mRNA-1;_AED=0.14;_eAED=0.14;_QI=159|0.75|0.8|1|0.75|0.6|5|380|801
chr2_4 exon 6131909 6132426 6131909 ID=Msa0311280-mRNA-1:exon:2331;Parent=Msa0311280-mRNA-1
chr2_4 exon 6132518 6132687 6132518 ID=Msa0311280-mRNA-1:exon:2330;Parent=Msa0311280-mRNA-1
chr2_4 exon 6133307 6133816 6133307 ID=Msa0311280-mRNA-1:exon:2329;Parent=Msa0311280-mRNA-1
chr2_4 exon 6133902 6135520 6133902 ID=Msa0311280-mRNA-1:exon:2328;Parent=Msa0311280-mRNA-1
chr2_4 exon 6136820 6136947 6136820 ID=Msa0311280-mRNA-1:exon:2327;Parent=Msa0311280-mRNA-1
chr2_4 five_prime_UTR 6136820 6136947 6136820 ID=Msa0311280-mRNA-1:five_prime_utr;Parent=Msa0311280-mRNA-1
chr2_4 five_prime_UTR 6135490 6135520 6135490 ID=Msa0311280-mRNA-1:five_prime_utr;Parent=Msa0311280-mRNA-1
chr2_4 CDS 6133902 6135489 6133902 ID=Msa0311280-mRNA-1:cds;Parent=Msa0311280-mRNA-1
chr2_4 CDS 6133307 6133816 6133307 ID=Msa0311280-mRNA-1:cds;Parent=Msa0311280-mRNA-1
chr2_4 CDS 6132518 6132687 6132518 ID=Msa0311280-mRNA-1:cds;Parent=Msa0311280-mRNA-1
chr2_4 CDS 6132289 6132426 6132289 ID=Msa0311280-mRNA-1:cds;Parent=Msa0311280-mRNA-1
chr2_4 three_prime_UTR 6131909 6132288 6131909 ID=Msa0311280-mRNA-1:three_prime_utr;Parent=Msa0311280-mRNA-1
Gene Sequence

>Msa0311280

ATGGTTGTTAGGGCTTCTAAAAGAAAAAAGTTGCTGAATTTATATGACTCTAAGTCTGATGATGATTATGATGTACCTTTGAGAGCAAAGTCATTGTCAACTTTGAATTTGGGAGCAAGTAGTAGTAGTAGTAGTAAATCAATTGAGAATAGGCCTACTAGACTGCCAGCAAAGAGGCCTTTTGATGACAACATTTCCTCGCAAACTTCGGTTAAAAAATCAAAGTTGTCATCGTTTTCCATTAAGCTCATGAAGAAGAGCATACTCGGATTAAGGAGCGTTGAGGAGGAAAAATTGCAATCCCTTGAGAGAGATATTGAGGAGTGCTCCAAAGAGCTTCTAAATAAGAAAAAGCAAGCTAGTGATGTTAGACGAACTAACCAATATTACGAGGAAATGCAGAACAAAATCGAAAAAGGTGTCAAAGATCTTGCAGCAAACGAAGCACATGTCCGTTTCATCGAGGGTTTGATTAAAAACAAAACACTTGAGCTCAAGAAAAATAAGAGACAACTTCTTACAGCCATGGATAGCAATAGTAAAGGCCGTGGAAGATTGAAGGAAAAAGAGCTAGAGACTCTTTCACAAAAAATTGCTGAATGTACTCAGGAAATTAAGACGAGAAAGGAAGAGCTTGATGCTTCGAAAATATCTGTTAATCATAAAATAAAAGAACTAATGTCAGAAAGGAGTAACATACTAAATGTAATGTCAGAGAGGAGAACTGGTCAGCTTGTTCAAATGAAGGACTTGGAGTTAACGGAAAAGCAATTTGAAGGTGGAGCTACAGAGTTTGATTCCAAAATGAAGCAGTGTGACCGACGACTAGAAGGGGTTGAATCAAATGAGAAGCTCTATAAAGGGCAGACAAAGGTGTCGGAGTCAAAGCAGGAGGAATTCGAAAGTCAGGTGAAGGAGCTTGAATCAAAAAAGAAGCAATTTGAAAGCCAGGAAAAGGTGCTCGGATTAAAAGAGAAGCTATTTCAAAGACAAGTAGATGATCTGGAATCATGCAAGGAGCATTTTGAAAGCCAACTGAAGGGACTCAAATCAAAAGAGAAGATATTTGAAAGACGGATGAAGGAGTTGAAGTCAAAAGAGGAACGTTTTCAAAGACGAGTGAAGGAGTTTGAATTAAGAGAGTGTGATTTTGAAGGCCAGGTGAAGGACTTCGAATCAAAATTGAAGCAATATGAAGGACAAGTGAAGGAGTTACAATCAAAGAGAGAGGAATTTGAAGGCCGAGTGGAAGAGTTTAAATCACAAGAGAAGGACTTTGAAAGCCGAGTAAAGGGGTTTGAATCAAAAAAGGACTTTGAAAGCCGAGTGACGAAGTTTGAAACAGTAGAGAAGGACTTTGAAATCCGAGTGAGGAAGTTCAAATCAGTAGAGAAGGACTTTGAAAGCCGAGTTAGGAAGTTTGAATCAGTAGAGAAGGACTTTGAAAGCCGAGTTAGGAAGTTTGAATCAGCAGAGAAGGACTTTGAAAGCCGAGTGAAGAAGTTTGAATCAAAAGAAGAGGAACTTGAGCTAAGAGACGGTCAATATGAAACGTTAATAAAATCATTTGAAGAGGAAATTGAATCAGCTAATTATGCAATTTCATCTTTCACAGATGATCAACCAAGTCCTGCCATTGATGGAAGAAGTTTGCAGTTTCTCCCAATTGAGGAAATTGATGAACTTGAGTCACACGGCAATGACAGTCTAGCTAATCTGCTGGCATCATCATCAGACCCATCAAAAGATGTTTTAGATATAATCCAGAACCCCATCATTCCACAGTGTAAGGGAGAAAATGTTGTAATTATTGATGATCACCACATTGATCTGCTCGAACAACTGATGAGAATCTCACCACATGTTAAACCTCATGTGCGAGAAGAAGCAATGAAGCTAGCACTTAAACTGAAAGCTTACATTGGAGAAAATACTGCAAATCCAGTACCAGTTCTGGGGTTTTTGCTCCTTCTGTCAATTTATGGATTGGTTTCTTCTTTCGATGAAGATGAAGTTTTAAAGCTTTTTGGGTTTGCTGCTCAACACAAGATATCTGTAGAGCTGTTTGGGACTATGGGTTTGGCACATAAAGTTTCTGATTTAGTTCAGAATCTTATCATGAAGCAGCAATATATTGAAGCTGTTAGATTCATTTGTTATAACACGGCCACCAAGAATCAATCAGTTGATCTATTGCGGGAACATGTGCAGAATGCAAGAACAATTTATGAGAGCAGTTGCAAGGCAACCAACTCCATTGAAATCAAGGACAAGGCAAGAGACCAGGAAATTGCTAGTCTGAGAACTGTTCTACAGTGTCTTTCAGATAACAATATTGAATCTGCGGATTTACTCAACGAGATTCACAGTAGAATTCTTGAGCTAAATAGAGAGAAAGGCGAGTAG
Protein sequence

>Msa0311280

MVVRASKRKKLLNLYDSKSDDDYDVPLRAKSLSTLNLGASSSSSSKSIENRPTRLPAKRPFDDNISSQTSVKKSKLSSFSIKLMKKSILGLRSVEEEKLQSLERDIEECSKELLNKKKQASDVRRTNQYYEEMQNKIEKGVKDLAANEAHVRFIEGLIKNKTLELKKNKRQLLTAMDSNSKGRGRLKEKELETLSQKIAECTQEIKTRKEELDASKISVNHKIKELMSERSNILNVMSERRTGQLVQMKDLELTEKQFEGGATEFDSKMKQCDRRLEGVESNEKLYKGQTKVSESKQEEFESQVKELESKKKQFESQEKVLGLKEKLFQRQVDDLESCKEHFESQLKGLKSKEKIFERRMKELKSKEERFQRRVKEFELRECDFEGQVKDFESKLKQYEGQVKELQSKREEFEGRVEEFKSQEKDFESRVKGFESKKDFESRVTKFETVEKDFEIRVRKFKSVEKDFESRVRKFESVEKDFESRVRKFESAEKDFESRVKKFESKEEELELRDGQYETLIKSFEEEIESANYAISSFTDDQPSPAIDGRSLQFLPIEEIDELESHGNDSLANLLASSSDPSKDVLDIIQNPIIPQCKGENVVIIDDHHIDLLEQLMRISPHVKPHVREEAMKLALKLKAYIGENTANPVPVLGFLLLLSIYGLVSSFDEDEVLKLFGFAAQHKISVELFGTMGLAHKVSDLVQNLIMKQQYIEAVRFICYNTATKNQSVDLLREHVQNARTIYESSCKATNSIEIKDKARDQEIASLRTVLQCLSDNNIESADLLNEIHSRILELNREKGE*