AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0548570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0548570 MtrunA17_Chr4g0031821 96.654 807 27 0 1 807 1 807 0.0 1609
Msa0548570 MtrunA17_Chr7g0260601 73.217 687 135 7 117 766 14 688 0.0 986
Msa0548570 MtrunA17_Chr7g0248361 72.377 648 144 9 126 766 23 642 0.0 917
Msa0548570 MtrunA17_Chr6g0476861 69.141 687 154 9 126 794 28 674 0.0 912
Msa0548570 MtrunA17_Chr1g0168321 63.986 572 114 7 126 696 23 503 0.0 692
Msa0548570 MtrunA17_Chr3g0094871 76.169 449 89 4 315 760 6 439 0.0 692
Msa0548570 MtrunA17_Chr3g0143721 48.673 452 214 6 320 757 249 696 6.70e-141 432
Msa0548570 MtrunA17_Chr2g0297281 47.505 461 225 9 320 770 286 739 3.33e-132 411
Msa0548570 MtrunA17_Chr4g0052411 48.230 452 216 9 320 759 229 674 2.47e-131 407
Msa0548570 MtrunA17_Chr7g0217421 53.803 355 156 6 320 671 39 388 1.02e-122 375
Msa0548570 MtrunA17_Chr5g0429571 45.175 456 228 10 293 728 284 737 6.12e-112 359
Msa0548570 MtrunA17_Chr3g0135721 42.516 461 243 9 311 761 215 663 7.92e-112 356
Msa0548570 MtrunA17_Chr3g0135761 42.333 463 243 9 312 767 218 663 1.28e-109 350
Msa0548570 MtrunA17_Chr1g0158881 40.900 511 277 9 254 757 262 754 1.88e-109 352
Msa0548570 MtrunA17_Chr8g0362771 39.490 471 266 7 304 767 221 679 6.00e-107 344
Msa0548570 MtrunA17_Chr3g0104211 44.651 430 218 6 320 731 304 731 5.14e-106 343
Msa0548570 MtrunA17_Chr5g0432631 40.541 481 257 10 275 748 194 652 1.64e-102 336
Msa0548570 MtrunA17_Chr5g0432641 39.238 446 250 9 311 748 182 614 1.65e-90 298
Msa0548570 MtrunA17_Chr8g0388371 34.861 502 274 11 302 761 389 879 3.48e-80 276
Msa0548570 MtrunA17_Chr2g0331161 39.732 448 242 11 320 757 415 844 1.34e-78 271
Msa0548570 MtrunA17_Chr6g0456351 50.000 272 132 1 311 582 308 575 1.75e-78 265
Msa0548570 MtrunA17_Chr3g0129971 34.227 485 282 11 303 768 279 745 1.97e-69 245
Msa0548570 MtrunA17_Chr4g0050561 40.078 257 151 2 325 580 161 415 5.03e-55 195
Msa0548570 MtrunA17_Chr8g0345461 40.377 265 154 3 309 572 154 415 6.97e-55 195
Msa0548570 MtrunA17_Chr1g0182711 43.725 247 135 3 322 567 190 433 8.11e-55 196
Msa0548570 MtrunA17_Chr7g0262801 43.725 247 135 3 322 567 189 432 2.74e-54 194
Msa0548570 MtrunA17_Chr3g0135781 51.099 182 79 2 304 482 39 213 1.70e-53 184
Msa0548570 MtrunA17_Chr1g0200081 40.000 265 154 4 309 572 164 424 1.38e-52 189
Msa0548570 MtrunA17_Chr8g0392981 73.950 119 29 1 642 758 1 119 1.06e-51 176
Msa0548570 MtrunA17_Chr8g0392971 82.353 102 18 0 532 633 51 152 2.33e-51 176
Msa0548570 MtrunA17_Chr1g0192151 40.329 243 141 3 322 563 169 408 3.94e-51 184
Msa0548570 MtrunA17_Chr4g0014731 40.329 243 141 3 322 563 170 409 5.31e-51 184
Msa0548570 MtrunA17_Chr8g0357301 29.006 493 278 15 337 778 487 958 3.74e-50 191
Msa0548570 MtrunA17_Chr7g0255721 41.434 251 140 4 319 566 684 930 3.44e-49 187
Msa0548570 MtrunA17_Chr7g0255721 40.092 217 123 3 351 566 416 626 3.52e-31 131
Msa0548570 MtrunA17_Chr5g0432391 30.493 446 230 12 312 748 48 422 7.95e-49 178
Msa0548570 MtrunA17_Chr7g0255641 39.764 254 140 5 319 566 657 903 3.84e-48 184
Msa0548570 MtrunA17_Chr7g0255641 40.513 195 107 5 358 551 432 618 1.88e-29 125
Msa0548570 MtrunA17_Chr3g0108321 43.137 204 114 2 305 507 144 346 1.32e-47 173
Msa0548570 MtrunA17_Chr2g0327121 42.975 242 129 4 309 548 196 430 1.52e-47 181
Msa0548570 MtrunA17_Chr2g0327121 42.735 234 122 5 320 548 480 706 3.01e-46 177
Msa0548570 MtrunA17_Chr7g0255651 41.558 231 131 3 319 548 281 508 7.64e-47 176
Msa0548570 MtrunA17_Chr7g0255651 30.317 221 135 5 339 548 29 241 4.89e-19 91.7
Msa0548570 MtrunA17_Chr1g0180791 42.424 231 127 4 320 548 478 704 1.06e-46 179
Msa0548570 MtrunA17_Chr1g0180791 42.149 242 131 4 309 548 194 428 4.83e-46 177
Msa0548570 MtrunA17_Chr3g0145011 39.113 248 147 3 320 566 139 383 1.40e-46 171
Msa0548570 MtrunA17_Chr7g0264521 42.358 229 126 4 322 548 481 705 1.72e-46 178
Msa0548570 MtrunA17_Chr7g0264521 41.494 241 134 4 309 548 195 429 9.28e-46 176
Msa0548570 MtrunA17_Chr3g0141901 39.113 248 147 3 320 566 136 380 2.23e-46 171
Msa0548570 MtrunA17_Chr2g0277831 41.880 234 120 4 322 548 245 469 8.43e-41 161
Msa0548570 MtrunA17_Chr2g0277831 39.035 228 134 3 320 546 533 756 1.25e-40 160
Msa0548570 MtrunA17_Chr7g0255691 38.462 247 146 4 319 562 285 528 7.93e-40 155
Msa0548570 MtrunA17_Chr7g0255691 35.000 260 133 9 325 562 22 267 8.90e-27 115
Msa0548570 MtrunA17_Chr7g0255901 36.797 231 141 4 320 548 639 866 6.14e-39 155
Msa0548570 MtrunA17_Chr2g0321241 41.410 227 119 8 317 539 129 345 1.23e-36 143
Msa0548570 MtrunA17_Chr4g0026631 41.410 227 119 8 317 539 124 340 2.21e-36 142
Msa0548570 MtrunA17_Chr8g0387641 36.207 232 138 5 320 548 521 745 5.14e-36 146
Msa0548570 MtrunA17_Chr4g0033451 32.665 349 207 9 235 566 292 629 1.61e-35 145
Msa0548570 MtrunA17_Chr4g0043381 35.398 226 139 4 322 546 839 1058 3.99e-35 144
Msa0548570 MtrunA17_Chr1g0190401 22.807 570 354 9 270 756 606 1172 5.41e-35 144
Msa0548570 MtrunA17_Chr3g0086411 35.897 273 145 7 320 566 215 483 1.05e-34 139
Msa0548570 MtrunA17_Chr3g0086411 36.667 150 78 3 407 546 7 149 4.18e-18 88.6
Msa0548570 MtrunA17_Chr3g0086401 34.146 287 151 7 320 575 385 664 4.53e-34 139
Msa0548570 MtrunA17_Chr3g0086401 35.841 226 123 5 322 535 94 309 1.38e-31 131
Msa0548570 MtrunA17_Chr6g0462581 36.638 232 136 6 320 548 500 723 5.92e-34 139
Msa0548570 MtrunA17_Chr3g0135791 31.557 244 161 4 527 767 19 259 7.26e-34 132
Msa0548570 MtrunA17_Chr4g0004121 33.535 331 184 11 290 593 208 529 1.09e-33 136
Msa0548570 MtrunA17_Chr2g0327231 43.195 169 92 3 314 480 340 506 1.53e-33 135
Msa0548570 MtrunA17_Chr2g0327231 37.000 100 60 1 309 408 142 238 4.28e-12 69.3
Msa0548570 MtrunA17_Chr4g0038101 35.931 231 131 7 320 543 721 941 3.50e-33 137
Msa0548570 MtrunA17_Chr5g0397121 35.345 232 140 5 320 548 513 737 5.04e-33 137
Msa0548570 MtrunA17_Chr1g0204031 36.752 234 136 7 319 548 556 781 7.20e-32 133
Msa0548570 MtrunA17_Chr2g0316851 32.946 258 160 5 299 548 571 823 7.64e-32 134
Msa0548570 MtrunA17_Chr4g0052271 37.975 237 138 7 320 554 119 348 9.53e-32 128
Msa0548570 MtrunA17_Chr1g0202371 36.957 230 128 8 320 543 397 615 1.16e-31 132
Msa0548570 MtrunA17_Chr1g0195731 36.052 233 138 6 320 548 934 1159 2.66e-31 132
Msa0548570 MtrunA17_Chr3g0127401 36.402 239 128 9 320 548 81 305 5.82e-31 125
Msa0548570 MtrunA17_Chr1g0202381 35.371 229 136 6 319 543 467 687 8.65e-31 129
Msa0548570 MtrunA17_Chr3g0127431 34.728 239 132 9 320 548 84 308 8.77e-31 125
Msa0548570 MtrunA17_Chr1g0195741 35.622 233 139 6 320 548 938 1163 1.02e-30 130
Msa0548570 MtrunA17_Chr4g0047411 36.546 249 128 7 345 567 202 446 4.90e-30 127
Msa0548570 MtrunA17_Chr3g0116131 35.526 228 136 6 320 543 902 1122 8.96e-30 127
Msa0548570 MtrunA17_Chr6g0459561 35.391 243 141 7 308 544 370 602 3.87e-28 120
Msa0548570 MtrunA17_Chr7g0246111 33.333 243 129 8 320 548 212 435 7.72e-28 118
Msa0548570 MtrunA17_Chr6g0459541 30.389 283 161 8 292 544 11 287 1.35e-25 108
Msa0548570 MtrunA17_Chr2g0289231 32.510 243 131 8 316 542 293 518 2.22e-23 105
Msa0548570 MtrunA17_Chr6g0459551 33.906 233 134 10 292 515 71 292 1.19e-20 95.5
Msa0548570 MtrunA17_Chr3g0135741 36.508 126 78 2 523 647 13 137 2.53e-17 79.7
Msa0548570 MtrunA17_Chr5g0432671 39.048 105 59 2 523 627 3 102 2.98e-15 72.4
Msa0548570 MtrunA17_Chr6g0459531 27.099 262 145 10 292 544 36 260 9.08e-14 73.2
Msa0548570 MtrunA17_Chr4g0062081 42.857 77 42 2 324 398 11 87 2.35e-13 66.6
Msa0548570 MtrunA17_Chr5g0404651 32.292 192 111 8 315 498 209 389 1.82e-11 67.4
Msa0548570 MtrunA17_Chr2g0316041 29.730 185 115 6 330 507 150 326 4.17e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0548570 AT1G07510.1 73.780 820 195 8 1 807 1 813 0.0 1184
Msa0548570 AT2G29080.1 73.049 820 194 13 1 807 4 809 0.0 1138
Msa0548570 AT1G50250.1 48.894 452 213 7 320 757 259 706 2.02e-140 432
Msa0548570 AT5G42270.1 48.009 452 217 6 320 757 247 694 9.71e-137 422
Msa0548570 AT1G06430.1 48.156 461 220 10 320 769 217 669 1.84e-132 410
Msa0548570 AT1G06430.3 48.156 461 220 10 320 769 217 669 1.84e-132 410
Msa0548570 AT1G06430.2 48.156 461 220 10 320 769 217 669 1.84e-132 410
Msa0548570 AT2G30950.4 47.722 461 222 10 320 769 228 680 1.77e-131 408
Msa0548570 AT2G30950.1 47.722 461 222 10 320 769 224 676 2.63e-131 407
Msa0548570 AT2G30950.2 47.722 461 222 10 320 769 224 676 2.63e-131 407
Msa0548570 AT2G30950.3 47.722 461 222 10 320 769 224 676 2.63e-131 407
Msa0548570 AT5G15250.1 47.095 482 233 12 302 771 204 675 1.11e-130 405
Msa0548570 AT2G26140.1 44.796 442 224 8 312 748 220 646 1.73e-113 362
Msa0548570 AT5G53170.1 42.315 501 270 9 261 757 299 784 6.00e-113 362
Msa0548570 AT5G58870.1 46.512 430 213 6 320 733 326 754 1.10e-112 362
Msa0548570 AT3G47060.1 46.279 430 214 7 320 733 322 750 4.79e-111 357
Msa0548570 AT5G15250.2 51.266 316 126 5 302 594 204 514 3.52e-98 315
Msa0548570 AT3G02450.1 51.724 261 121 2 314 573 324 580 1.19e-78 266
Msa0548570 AT4G23940.1 34.200 500 280 10 302 761 412 902 2.04e-76 267
Msa0548570 AT3G16290.1 37.778 450 253 10 320 758 407 840 1.06e-73 258
Msa0548570 AT5G64580.1 34.845 485 280 11 303 768 296 763 1.47e-69 246
Msa0548570 AT5G19990.2 40.467 257 150 2 325 580 105 359 6.05e-55 194
Msa0548570 AT5G19990.1 40.467 257 150 2 325 580 163 417 1.24e-54 195
Msa0548570 AT5G19990.3 40.467 257 150 2 325 580 163 417 1.24e-54 195
Msa0548570 AT4G29040.1 43.725 247 135 3 322 567 187 430 1.37e-54 195
Msa0548570 AT1G53750.1 40.377 265 154 3 309 572 154 415 1.45e-54 195
Msa0548570 AT5G20000.1 40.467 257 150 2 325 580 163 417 1.52e-54 194
Msa0548570 AT2G20140.1 43.725 247 135 3 322 567 187 430 6.55e-54 193
Msa0548570 AT1G53780.1 39.623 265 156 3 309 572 326 587 6.33e-53 194
Msa0548570 AT1G53780.4 39.623 265 156 3 309 572 326 587 6.33e-53 194
Msa0548570 AT1G53780.3 39.623 265 156 3 309 572 325 586 6.73e-53 194
Msa0548570 AT1G53780.2 39.623 265 156 3 309 572 347 608 8.08e-53 194
Msa0548570 AT5G58290.1 38.911 257 153 3 305 560 137 390 4.10e-52 187
Msa0548570 AT3G05530.1 41.152 243 139 3 322 563 170 409 4.85e-52 187
Msa0548570 AT1G09100.1 40.741 243 140 3 322 563 169 408 5.18e-52 187
Msa0548570 AT1G79560.1 27.728 559 347 14 268 781 439 985 3.15e-51 194
Msa0548570 AT1G79560.2 27.536 552 347 13 268 778 439 978 4.40e-51 194
Msa0548570 AT3G56690.1 40.637 251 142 4 319 566 720 966 4.48e-50 191
Msa0548570 AT3G56690.1 41.206 199 110 3 351 548 413 605 1.20e-34 143
Msa0548570 AT1G79560.3 28.261 506 317 12 268 739 439 932 7.93e-50 190
Msa0548570 AT5G03340.1 41.991 231 128 4 320 548 477 703 6.57e-47 180
Msa0548570 AT5G03340.1 41.085 258 141 5 309 564 193 441 9.44e-46 176
Msa0548570 AT3G53230.1 42.424 231 127 4 320 548 478 704 7.32e-47 180
Msa0548570 AT3G53230.1 40.316 253 144 4 309 560 194 440 2.12e-45 175
Msa0548570 AT5G43010.1 38.710 248 148 3 320 566 136 380 1.78e-46 171
Msa0548570 AT1G45000.1 38.710 248 148 3 320 566 136 380 2.64e-46 171
Msa0548570 AT3G09840.1 41.085 258 141 5 309 564 193 441 1.21e-45 176
Msa0548570 AT3G09840.1 41.304 230 132 2 320 548 477 704 1.54e-45 176
Msa0548570 AT3G01610.1 41.810 232 112 6 322 539 232 454 8.41e-40 158
Msa0548570 AT3G01610.1 34.828 290 165 7 303 575 508 790 1.48e-34 142
Msa0548570 AT3G01610.2 41.810 232 112 6 322 539 232 454 8.44e-40 158
Msa0548570 AT3G01610.2 34.828 290 165 7 303 575 508 790 1.62e-34 142
Msa0548570 AT2G03670.1 36.032 247 153 3 319 562 282 526 4.15e-38 151
Msa0548570 AT2G03670.1 30.719 306 186 8 324 612 23 319 3.86e-31 130
Msa0548570 AT1G03000.1 37.069 232 139 5 320 548 655 882 1.48e-37 152
Msa0548570 AT1G05910.1 34.459 296 179 6 288 576 348 635 1.58e-37 152
Msa0548570 AT1G64110.5 34.843 287 172 7 320 598 516 795 8.66e-37 149
Msa0548570 AT1G64110.3 34.843 287 172 7 320 598 516 795 8.66e-37 149
Msa0548570 AT1G64110.2 34.843 287 172 7 320 598 518 797 9.44e-37 149
Msa0548570 AT1G64110.4 34.843 287 172 7 320 598 518 797 9.44e-37 149
Msa0548570 AT1G64110.1 34.843 287 172 7 320 598 513 792 1.01e-36 149
Msa0548570 AT5G08470.3 36.481 233 127 6 322 546 834 1053 3.65e-35 144
Msa0548570 AT5G08470.1 36.481 233 127 6 322 546 843 1062 3.75e-35 144
Msa0548570 AT4G28000.1 35.776 232 138 5 320 548 515 738 8.22e-35 143
Msa0548570 AT4G28000.2 35.776 232 138 5 320 548 517 740 8.72e-35 142
Msa0548570 AT4G28000.3 35.776 232 138 5 320 548 517 740 9.15e-35 142
Msa0548570 AT3G04340.1 40.415 193 112 3 314 504 774 965 1.85e-34 142
Msa0548570 AT2G27600.1 39.474 228 122 9 317 539 126 342 8.90e-34 135
Msa0548570 AT5G52882.1 35.776 232 138 5 320 548 514 737 1.35e-33 139
Msa0548570 AT3G15120.2 36.910 233 132 5 322 546 728 953 3.93e-33 139
Msa0548570 AT3G15120.1 36.910 233 132 5 322 546 718 943 4.24e-33 138
Msa0548570 AT4G02480.1 31.126 302 171 7 320 591 960 1254 8.62e-33 137
Msa0548570 AT1G80350.1 36.653 251 140 7 320 560 236 477 3.79e-32 132
Msa0548570 AT2G03670.2 30.719 306 186 8 324 612 23 319 8.68e-32 129
Msa0548570 AT2G03670.2 39.286 140 84 1 319 457 282 421 2.26e-19 92.0
Msa0548570 AT5G53540.1 36.864 236 131 8 320 548 84 308 1.11e-31 128
Msa0548570 AT1G50140.2 35.931 231 131 7 320 543 689 909 1.09e-30 130
Msa0548570 AT1G50140.5 35.931 231 131 7 320 543 689 909 1.09e-30 130
Msa0548570 AT1G50140.3 35.931 231 131 7 320 543 711 931 1.31e-30 130
Msa0548570 AT1G50140.1 35.931 231 131 7 320 543 711 931 1.31e-30 130
Msa0548570 AT1G50140.4 35.931 231 131 7 320 543 711 931 1.31e-30 130
Msa0548570 AT2G45500.4 34.000 250 140 9 308 548 70 303 1.74e-30 124
Msa0548570 AT2G45500.3 34.000 250 140 9 308 548 70 303 1.74e-30 124
Msa0548570 AT1G02890.1 29.801 302 175 7 320 591 941 1235 2.49e-30 129
Msa0548570 AT3G19740.1 35.965 228 135 7 320 543 701 921 6.69e-30 127
Msa0548570 AT2G45500.2 34.000 250 140 9 308 548 203 436 7.11e-30 124
Msa0548570 AT2G45500.1 34.000 250 140 9 308 548 207 440 8.16e-30 124
Msa0548570 AT4G27680.1 36.017 236 133 8 320 548 81 305 8.20e-30 123
Msa0548570 AT2G45500.5 34.000 250 140 9 308 548 213 446 1.07e-29 124
Msa0548570 AT2G34560.1 37.662 231 136 7 320 548 100 324 2.57e-29 121
Msa0548570 AT2G34560.2 37.662 231 136 7 320 548 109 333 3.25e-29 121
Msa0548570 AT4G04910.1 37.288 236 122 8 345 564 239 464 9.50e-29 123
Msa0548570 AT3G27120.1 34.979 243 142 7 308 544 388 620 1.87e-27 119
Msa0548570 AT4G24860.4 34.211 228 139 6 320 543 790 1010 3.69e-27 119
Msa0548570 AT4G24860.3 34.211 228 139 6 320 543 815 1035 3.69e-27 119
Msa0548570 AT4G24860.1 34.211 228 139 6 320 543 817 1037 3.86e-27 119
Msa0548570 AT4G24860.2 34.211 228 139 6 320 543 813 1033 4.05e-27 119
Msa0548570 AT4G04180.1 31.513 238 142 7 315 542 311 537 2.08e-25 112
Msa0548570 AT4G04180.2 31.513 238 142 7 315 542 306 532 2.17e-25 112
Msa0548570 AT1G62130.1 32.035 231 128 7 320 543 750 958 1.26e-23 107
Msa0548570 AT1G62130.2 32.035 231 128 7 320 543 743 951 1.41e-23 107
Msa0548570 AT1G45000.2 40.288 139 81 2 320 457 136 273 8.72e-23 100
Msa0548570 AT5G08470.2 35.526 152 87 4 322 469 843 987 1.53e-19 94.7
Msa0548570 AT1G02890.2 26.490 302 157 8 320 591 941 1207 2.35e-19 94.4
Msa0548570 AT5G17760.1 31.148 183 96 7 322 489 218 385 1.64e-11 68.2

Find 218 sgRNAs with CRISPR-Local

Find 422 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCGCCAACCCTGTTGATTT+TGG 0.144951 4_1:-42702377 Msa0548570:CDS
TTTGGGAACTCTCTGGTTTA+TGG 0.154517 4_1:-42702359 Msa0548570:CDS
GCAAGATTGGGAACGCTTTA+TGG 0.172434 4_1:-42704923 Msa0548570:CDS
GTGCCATTTCTTTCCATATC+TGG 0.205745 4_1:-42701848 Msa0548570:CDS
CAGGGTGAGAAACTTGTTTC+TGG 0.216719 4_1:-42701786 Msa0548570:CDS
TTTAAATATGTAATCAATAT+TGG 0.218480 4_1:-42702523 Msa0548570:CDS
TGAAACCATAGATGGCTATT+TGG 0.222849 4_1:+42700235 None:intergenic
CCAAGCTCTTCGTATTTCTT+AGG 0.226217 4_1:+42701959 None:intergenic
TATTGATTACATATTTAAAT+TGG 0.233644 4_1:+42702527 None:intergenic
CTTCGCTGTCTGCTTGATTA+AGG 0.241757 4_1:+42702584 None:intergenic
CTCATCAATAAATACTATAC+TGG 0.248136 4_1:+42701745 None:intergenic
TGCTGTTGCAGGTTGGTTCT+TGG 0.252343 4_1:-42700748 Msa0548570:CDS
CAGGACAAAGGAGCAGCTTT+TGG 0.256747 4_1:-42700634 Msa0548570:CDS
TTCTCTGCAGATTAGTTTCC+AGG 0.261767 4_1:-42702698 Msa0548570:intron
TTTATCGATGATGTTGAAAA+TGG 0.267533 4_1:-42704881 Msa0548570:CDS
AGAGTTCCTCACATATATTT+TGG 0.268782 4_1:+42702609 None:intergenic
CTCAAAATGACGACGCGTTT+GGG 0.272158 4_1:-42700185 Msa0548570:CDS
CCTCAAAATGACGACGCGTT+TGG 0.275529 4_1:-42700186 Msa0548570:CDS
GATGATGTTGAAAATGGATT+AGG 0.287741 4_1:-42704875 Msa0548570:CDS
CATATCTGGTTCCGATTTCA+TGG 0.290608 4_1:-42701834 Msa0548570:CDS
TCAAATAAATCTGAAATATC+TGG 0.292729 4_1:+42701492 None:intergenic
CATGAAATCGGAACCAGATA+TGG 0.293162 4_1:+42701835 None:intergenic
AGATGACTTGGTTCGAATCT+TGG 0.302830 4_1:-42700007 Msa0548570:CDS
ATTGATGTACCCGACATTAA+AGG 0.311294 4_1:-42701521 Msa0548570:CDS
CGAGGCAAAGCAAGAAATTA+TGG 0.326964 4_1:-42702005 Msa0548570:CDS
AGGAAAGTGCAAGGTGGATT+TGG 0.333587 4_1:-42702334 Msa0548570:CDS
ATGATGTTGAAAATGGATTA+GGG 0.334363 4_1:-42704874 Msa0548570:CDS
TTGGGAACTCTCTGGTTTAT+GGG 0.337589 4_1:-42702358 Msa0548570:CDS
AAATCAATTGTTGGTGGAAA+TGG 0.339562 4_1:-42701651 Msa0548570:CDS
AATTCCAAAAGGTGCTCTTC+TGG 0.340894 4_1:-42701930 Msa0548570:CDS
TGGTGGTCGGGCTGCCGAGC+AGG 0.341124 4_1:-42700592 Msa0548570:intron
GCCCTTACTCCAGGATTTGC+TGG 0.341796 4_1:-42701419 Msa0548570:CDS
CCTTTGCAGGAAGGGTTCCT+TGG 0.342572 4_1:+42702560 None:intergenic
TGTGGGTTCTGCACTCTTGA+AGG 0.349056 4_1:+42699975 None:intergenic
TCTGCCATAGCTCGTAATAA+TGG 0.355581 4_1:-42704830 Msa0548570:CDS
CGATAGGATCATTGGTGGTT+TGG 0.356353 4_1:-42701303 Msa0548570:CDS
GAAACCATAGATGGCTATTT+GGG 0.358295 4_1:+42700236 None:intergenic
CTGCCATAGCTCGTAATAAT+GGG 0.361252 4_1:-42704829 Msa0548570:CDS
GATGACTTGGTTCGAATCTT+GGG 0.367294 4_1:-42700006 Msa0548570:CDS
TTGATCAGGAAGTGCGAGAT+TGG 0.371100 4_1:-42700131 Msa0548570:CDS
CAACAGCATGGCCTGCTTCA+TGG 0.372235 4_1:+42700763 None:intergenic
TGGCCACCAGATCCCTTTGC+AGG 0.378325 4_1:+42702547 None:intergenic
CCTCGCGGCACAGCAGCACT+TGG 0.379585 4_1:-42700690 Msa0548570:CDS
GAAATAGACTTTGATTAGCT+TGG 0.380375 4_1:+42699696 None:intergenic
TTTCTTTCATCCCTTTCTCT+TGG 0.380958 4_1:-42704077 Msa0548570:CDS
TGTTATGTATTCTTCTGAAA+TGG 0.383217 4_1:-42702425 Msa0548570:CDS
GTTGCACGGTGAAGCAAGAT+TGG 0.387025 4_1:-42704936 Msa0548570:CDS
GGTTCTCACTAGGAACATAT+TGG 0.390805 4_1:+42700661 None:intergenic
GACAAACATTTCCATGAAAT+CGG 0.392442 4_1:+42701823 None:intergenic
TTCGCTGTCTGCTTGATTAA+GGG 0.399007 4_1:+42702585 None:intergenic
AAAGCAACTGCAGGGGAGTC+TGG 0.399715 4_1:-42701872 Msa0548570:CDS
ACCCTTCCTGCAAAGGGATC+TGG 0.404556 4_1:-42702553 Msa0548570:CDS
TGTATTCTTCTGAAATGGTT+TGG 0.408063 4_1:-42702420 Msa0548570:CDS
TATGCCCAAATAGCCATCTA+TGG 0.410083 4_1:-42700240 Msa0548570:CDS
TTGATGCAATTGGTCGGAAA+AGG 0.411767 4_1:-42701721 Msa0548570:CDS
CCCACCAGAAGAGCACCTTT+TGG 0.413587 4_1:+42701926 None:intergenic
AGGGGTCGTGGAGGTTTCTC+TGG 0.415439 4_1:-42701701 Msa0548570:CDS
AGAGAGTTCCCAAAATCAAC+AGG 0.415902 4_1:+42702368 None:intergenic
AAACTATCTCACCCCATTGT+TGG 0.420910 4_1:-42704111 Msa0548570:CDS
GTGTTCTTCTATAAGCTGTA+TGG 0.421606 4_1:+42700086 None:intergenic
AAACCATACAGCGGCGATAC+TGG 0.423477 4_1:-42700162 Msa0548570:CDS
AACTATGTGGGAACAACCTC+AGG 0.425530 4_1:+42699853 None:intergenic
TTGTATGACCCTTGGTGGTC+GGG 0.425818 4_1:-42700604 Msa0548570:CDS
TTCTGAAATGGTTTGGTACC+AGG 0.426278 4_1:-42702413 Msa0548570:CDS
GGTGGATTTGGTGTTGGTGG+TGG 0.427309 4_1:-42702322 Msa0548570:CDS
CAAGGTGGATTTGGTGTTGG+TGG 0.428799 4_1:-42702325 Msa0548570:CDS
GAAGCAGGCCATGCTGTTGC+AGG 0.430567 4_1:-42700759 Msa0548570:CDS
GATTTCATGGAAATGTTTGT+CGG 0.439839 4_1:-42701821 Msa0548570:CDS
CTTAAATCTATCGTAATTTG+TGG 0.441735 4_1:+42699957 None:intergenic
TGGTGATATTTGTAGTTGTC+GGG 0.442556 4_1:+42705222 None:intergenic
ATGTCTGCTCCAGCAAATCC+TGG 0.444210 4_1:+42701410 None:intergenic
GTGGTTTGGAGAAGAAGAAC+AGG 0.451185 4_1:-42701289 Msa0548570:CDS
ATGGTGATATTTGTAGTTGT+CGG 0.451906 4_1:+42705221 None:intergenic
GGTGTTGGTGGTGGCTCCAC+TGG 0.453849 4_1:-42702313 Msa0548570:CDS
CTCCAGCAAATCCTGGAGTA+AGG 0.456693 4_1:+42701417 None:intergenic
ATTTGTTGGAGACAACAATA+TGG 0.457579 4_1:+42702638 None:intergenic
AAGTACTTTAAATCAATTGT+TGG 0.458092 4_1:-42701660 Msa0548570:CDS
ATTTCAGAAGAATACATAAC+AGG 0.458585 4_1:+42702427 None:intergenic
TTAAATCTATCGTAATTTGT+GGG 0.460225 4_1:+42699958 None:intergenic
TTACCAGTATCGCCGCTGTA+TGG 0.460948 4_1:+42700159 None:intergenic
GTTCTCACTAGGAACATATT+GGG 0.461038 4_1:+42700662 None:intergenic
ATTGATGAGATTGATGCAAT+TGG 0.464604 4_1:-42701731 Msa0548570:CDS
TACTGGTAACATCATTGATC+AGG 0.465960 4_1:-42700145 Msa0548570:CDS
TCTCACCCCATTGTTGGTGG+TGG 0.465963 4_1:-42704105 Msa0548570:CDS
ATGGAAATGTTTGTCGGTGT+TGG 0.466679 4_1:-42701815 Msa0548570:CDS
CACTGGAGCACAAAATGACT+TGG 0.469816 4_1:-42700283 Msa0548570:CDS
ATAGTCCCACCACCAACAAT+GGG 0.471876 4_1:+42704099 None:intergenic
GAAGGAAGTGCCAAAGGGAG+AGG 0.474904 4_1:-42704584 Msa0548570:CDS
ACCAGATCCCTTTGCAGGAA+GGG 0.475185 4_1:+42702552 None:intergenic
GTGGGTTCTGCACTCTTGAA+GGG 0.475380 4_1:+42699976 None:intergenic
CTCATTGGAGCAATCTCCAC+TGG 0.475680 4_1:-42700300 Msa0548570:CDS
TTGCACGGTGAAGCAAGATT+GGG 0.476061 4_1:-42704935 Msa0548570:CDS
TGATGCAATTGGTCGGAAAA+GGG 0.476507 4_1:-42701720 Msa0548570:CDS
ATTACGATAGATTTAAGCTA+GGG 0.479014 4_1:-42699951 Msa0548570:CDS
TTGGTGGAAATGGATGGTTT+TGG 0.480220 4_1:-42701641 Msa0548570:CDS
TTGTCGGTGTTGGACCATCC+AGG 0.481495 4_1:-42701805 Msa0548570:CDS
GAACCAGATATGGAAAGAAA+TGG 0.481617 4_1:+42701845 None:intergenic
TATTTGGGCATATGTCATCT+TGG 0.483350 4_1:+42700251 None:intergenic
TGAAGACCCACCACCCTCCT+TGG 0.483888 4_1:+42699885 None:intergenic
CTCGCGGCACAGCAGCACTT+GGG 0.487871 4_1:-42700689 Msa0548570:CDS
GCTGGAGTTGTTGTGCTAGC+AGG 0.490258 4_1:-42701611 Msa0548570:CDS
CTCCTTGGCTTCATCGACGA+TGG 0.491547 4_1:+42699900 None:intergenic
GATGAAGCCAAGGAGGGTGG+TGG 0.491766 4_1:-42699892 Msa0548570:CDS
TGCCTAGGTAATAAGTAAGC+TGG 0.491812 4_1:-42700805 Msa0548570:intron
AGCCTTCATATTATTCTCAA+AGG 0.492433 4_1:-42701448 Msa0548570:CDS
TTCCTAGTGAGAACCTTCTC+AGG 0.496104 4_1:-42700653 Msa0548570:CDS
GCAGCTATCGATAGGATCAT+TGG 0.496191 4_1:-42701311 Msa0548570:CDS
GATCACGAGGACCAAGAGAA+AGG 0.498134 4_1:+42704066 None:intergenic
GCTGATATGGACAACTTGTA+CGG 0.500045 4_1:-42699775 Msa0548570:three_prime_UTR
GACAACGCCTTACTTAGGCC+TGG 0.501131 4_1:-42701566 Msa0548570:CDS
GGAAAAGAAGGAAGTGCCAA+AGG 0.503043 4_1:-42704590 Msa0548570:CDS
TACTTTAAATCAATTGTTGG+TGG 0.503402 4_1:-42701657 Msa0548570:CDS
GATATGACTTGTATGACCCT+TGG 0.505273 4_1:-42700612 Msa0548570:CDS
AGATTCGAACCAAGTCATCT+TGG 0.507271 4_1:+42700010 None:intergenic
CAAGGAACCCTTCCTGCAAA+GGG 0.510654 4_1:-42702559 Msa0548570:CDS
TGATCAGGAAGTGCGAGATT+GGG 0.511795 4_1:-42700130 Msa0548570:CDS
GAAAACATGCGATGAAGCCT+AGG 0.512524 4_1:+42704764 None:intergenic
AATCAATTGCTGCAAACCCT+AGG 0.513115 4_1:-42704781 Msa0548570:CDS
ACAATATGGTCTACTAATCC+TGG 0.514715 4_1:+42702652 None:intergenic
TCCAAAAGGTGCTCTTCTGG+TGG 0.519532 4_1:-42701927 Msa0548570:CDS
CTTGTATGACCCTTGGTGGT+CGG 0.520582 4_1:-42700605 Msa0548570:CDS
AAACCCATTATTACGAGCTA+TGG 0.521150 4_1:+42704826 None:intergenic
CCAAGGAACCCTTCCTGCAA+AGG 0.522628 4_1:-42702560 Msa0548570:CDS
AGGCTTGCAGCCCTTACTCC+AGG 0.523091 4_1:-42701428 Msa0548570:CDS
AATAGTCCCACCACCAACAA+TGG 0.523458 4_1:+42704098 None:intergenic
AAAACGCCCAGGCCTAAGTA+AGG 0.525242 4_1:+42701559 None:intergenic
CAAACATAAACTTAACTATG+TGG 0.526794 4_1:+42699840 None:intergenic
TCGCTGTCTGCTTGATTAAG+GGG 0.530649 4_1:+42702586 None:intergenic
ACCGTTGCTTACCATGAAGC+AGG 0.531277 4_1:-42700774 Msa0548570:CDS
ATCACGAGGACCAAGAGAAA+GGG 0.533495 4_1:+42704067 None:intergenic
AATTACGATAGATTTAAGCT+AGG 0.533611 4_1:-42699952 Msa0548570:CDS
ATTGGTCGGAAAAGGGGTCG+TGG 0.536073 4_1:-42701713 Msa0548570:CDS
CACCAGATCCCTTTGCAGGA+AGG 0.536420 4_1:+42702551 None:intergenic
CTCGGCAGCCCGACCACCAA+GGG 0.536999 4_1:+42700596 None:intergenic
GGTCGTGGAATATTTAACAT+TGG 0.540391 4_1:-42702283 Msa0548570:CDS
CCTAAGAAATACGAAGAGCT+TGG 0.541178 4_1:-42701959 Msa0548570:CDS
CGTATTTCTTAGGATTCTTG+AGG 0.544887 4_1:+42701969 None:intergenic
TCAAAGTCAAACACAGAGGA+TGG 0.545037 4_1:-42704170 Msa0548570:CDS
GTGCAAGGTGGATTTGGTGT+TGG 0.545995 4_1:-42702328 Msa0548570:CDS
TGGTCCTCGTGATCAGCAGC+AGG 0.548339 4_1:-42704057 Msa0548570:intron
TGGTCACGACCTTTAATGTC+GGG 0.548973 4_1:+42701512 None:intergenic
AGCCTTTGAGAATAATATGA+AGG 0.549153 4_1:+42701446 None:intergenic
CTCACCCCATTGTTGGTGGT+GGG 0.551716 4_1:-42704104 Msa0548570:CDS
CTTGGTGCCAAAATTCCAAA+AGG 0.552017 4_1:-42701941 Msa0548570:CDS
TATTAGACAACGCCTTACTT+AGG 0.552358 4_1:-42701571 Msa0548570:CDS
AAACATAAACTTAACTATGT+GGG 0.552385 4_1:+42699841 None:intergenic
GCGCAAATCTCATTAACTCC+TGG 0.554538 4_1:+42702395 None:intergenic
CTATCTCACCCCATTGTTGG+TGG 0.556416 4_1:-42704108 Msa0548570:CDS
TAAGCTAGGGTTTCAAGATG+AGG 0.556661 4_1:-42699938 Msa0548570:CDS
TTGAAGAAACAATGGTAACT+AGG 0.558174 4_1:+42705101 None:intergenic
CAGGCCATGCTGTTGCAGGT+TGG 0.560076 4_1:-42700755 Msa0548570:CDS
GCTGCTCCTTTGTCCTGAGA+AGG 0.560952 4_1:+42700640 None:intergenic
ACAACGCCTTACTTAGGCCT+GGG 0.561103 4_1:-42701565 Msa0548570:CDS
GAACTCTCTGGTTTATGGGA+AGG 0.561814 4_1:-42702354 Msa0548570:CDS
AACAAGTTTCTCACCCTGGA+TGG 0.565612 4_1:+42701791 None:intergenic
AGGTAATAAGTAAGCTGGAA+AGG 0.566130 4_1:-42700800 Msa0548570:CDS
TCCACTGGTAAGAATGGTCG+TGG 0.570992 4_1:-42702298 Msa0548570:CDS
TCATCAATAAATACTATACT+GGG 0.572453 4_1:+42701746 None:intergenic
AGTACTTCACCAAGATGACT+TGG 0.572458 4_1:-42700019 Msa0548570:CDS
GAAACTTGTTTCTGGAAGCA+AGG 0.572866 4_1:-42701778 Msa0548570:CDS
GAGGAAGCGCAAGAAGCACT+AGG 0.572888 4_1:-42702472 Msa0548570:CDS
GAAAAGAAGGAAGTGCCAAA+GGG 0.575045 4_1:-42704589 Msa0548570:CDS
GCTCGGCAGCCCGACCACCA+AGG 0.576079 4_1:+42700595 None:intergenic
TCCACGACCATTCTTACCAG+TGG 0.580385 4_1:+42702297 None:intergenic
TCCAGCAAATCCTGGAGTAA+GGG 0.580747 4_1:+42701418 None:intergenic
CCAAAAGGTGCTCTTCTGGT+GGG 0.582841 4_1:-42701926 Msa0548570:CDS
ATTTCGAGGCAGCTATCGAT+AGG 0.584687 4_1:-42701319 Msa0548570:CDS
CTGGTCACGACCTTTAATGT+CGG 0.585085 4_1:+42701511 None:intergenic
AACCATCGTCGATGAAGCCA+AGG 0.587489 4_1:-42699902 Msa0548570:CDS
ACAATAGTTACTTTCAACAA+AGG 0.587502 4_1:+42700714 None:intergenic
GTTCCCAAAATCAACAGGGT+TGG 0.588353 4_1:+42702373 None:intergenic
ATCGTGCGGTCAAAACGCCC+AGG 0.591416 4_1:+42701548 None:intergenic
CAGAAACAAGTTTCTCACCC+TGG 0.591544 4_1:+42701787 None:intergenic
GTCTTCACCTCTAGAACCTG+AGG 0.592909 4_1:-42699869 Msa0548570:CDS
AGTCACAATGGATCATTTCG+AGG 0.595853 4_1:-42701333 Msa0548570:CDS
ATCATGCTTTGAAGAAACAA+TGG 0.598166 4_1:+42705093 None:intergenic
GGTGGCTCCACTGGTAAGAA+TGG 0.599960 4_1:-42702304 Msa0548570:CDS
ATGACTTGTATGACCCTTGG+TGG 0.602845 4_1:-42700609 Msa0548570:CDS
TGGTTTGGAGAAGAAGAACA+GGG 0.606026 4_1:-42701288 Msa0548570:intron
AAAACATGCGATGAAGCCTA+GGG 0.607666 4_1:+42704765 None:intergenic
GCCTGCTTCATGGTAAGCAA+CGG 0.609319 4_1:+42700773 None:intergenic
CTTCCTGCAAAGGGATCTGG+TGG 0.609552 4_1:-42702550 Msa0548570:CDS
GATGCAATTGGTCGGAAAAG+GGG 0.610099 4_1:-42701719 Msa0548570:CDS
AAATGATGAAACAACCTGCT+CGG 0.612044 4_1:+42700578 None:intergenic
TGTCGGTGTTGGACCATCCA+GGG 0.613071 4_1:-42701804 Msa0548570:CDS
GTCCTGAGAAGGTTCTCACT+AGG 0.616189 4_1:+42700651 None:intergenic
GCTATCGATAGGATCATTGG+TGG 0.616670 4_1:-42701308 Msa0548570:CDS
ATGAAGCCAAGGAGGGTGGT+GGG 0.619072 4_1:-42699891 Msa0548570:CDS
CAAGCAGACAGCGAAGTCCA+AGG 0.624939 4_1:-42702577 Msa0548570:CDS
CAATTGTTGGTGGAAATGGA+TGG 0.625755 4_1:-42701647 Msa0548570:CDS
CATCGTCGATGAAGCCAAGG+AGG 0.628464 4_1:-42699899 Msa0548570:CDS
GAGAATAATATGAAGGCTCG+TGG 0.628614 4_1:+42701453 None:intergenic
GTCGATGAAGCCAAGGAGGG+TGG 0.631690 4_1:-42699895 Msa0548570:CDS
ATGAGATTGATGCAATTGGT+CGG 0.631846 4_1:-42701727 Msa0548570:CDS
CTTACCTGCTGCTGATCACG+AGG 0.632040 4_1:+42704053 None:intergenic
GGAACAACCTCAGGTTCTAG+AGG 0.634295 4_1:+42699862 None:intergenic
AAGCTGCTCTGATTGCTGCA+AGG 0.638573 4_1:-42701370 Msa0548570:CDS
TGATGAATCACAAGTCACAA+TGG 0.642219 4_1:-42701345 Msa0548570:CDS
GGTCGGAAAAGGGGTCGTGG+AGG 0.642405 4_1:-42701710 Msa0548570:CDS
ATCGTCGATGAAGCCAAGGA+GGG 0.650482 4_1:-42699898 Msa0548570:CDS
TAGCACAACAACTCCAGCAG+TGG 0.652358 4_1:+42701616 None:intergenic
AGAACCAACCTGCAACAGCA+TGG 0.654487 4_1:+42700751 None:intergenic
GTCATGTAGAATTTGTTGCA+CGG 0.655486 4_1:-42704950 Msa0548570:intron
ATGGGAAGGAAAGTGCAAGG+TGG 0.659337 4_1:-42702340 Msa0548570:CDS
TGAGAACCTTCTCAGGACAA+AGG 0.663177 4_1:-42700646 Msa0548570:CDS
AAGTCAAACACAGAGGATGG+AGG 0.663945 4_1:-42704167 Msa0548570:CDS
CCAAGTGCTGCTGTGCCGCG+AGG 0.668668 4_1:+42700690 None:intergenic
TTTAGCAAAAGCAACTGCAG+GGG 0.671935 4_1:-42701879 Msa0548570:CDS
GTACATCAATTGATATCGTG+CGG 0.694326 4_1:+42701534 None:intergenic
CAGTTGCCAAAATATATGTG+AGG 0.694454 4_1:-42702615 Msa0548570:CDS
AAAGTAACTATTGTTCCTCG+CGG 0.694758 4_1:-42700705 Msa0548570:CDS
ACAGCTTATAGAAGAACACA+AGG 0.695122 4_1:-42700082 Msa0548570:CDS
TTTATGGGAAGGAAAGTGCA+AGG 0.696455 4_1:-42702343 Msa0548570:CDS
AGATGTTGCTGGCTGTGACG+AGG 0.714294 4_1:-42702023 Msa0548570:CDS
GAGAGTTCCCAAAATCAACA+GGG 0.726423 4_1:+42702369 None:intergenic
TAGTCCCACCACCAACAATG+GGG 0.742812 4_1:+42704100 None:intergenic
TGAGTCAAAGTCAAACACAG+AGG 0.760960 4_1:-42704174 Msa0548570:CDS
GCGTTTGGGAAACCATACAG+CGG 0.791210 4_1:-42700171 Msa0548570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTATTAATGATTTTTAAT+TGG - chr4_1:42699920-42699939 Msa0548570:CDS 10.0%
!!! TTATTTTAATTTTCTTATGT+GGG - chr4_1:42700895-42700914 Msa0548570:intron 10.0%
!!! TATTGATTACATATTTAAAT+TGG + chr4_1:42702369-42702388 None:intergenic 10.0%
!! TTTAAATATGTAATCAATAT+TGG - chr4_1:42702370-42702389 Msa0548570:CDS 10.0%
!! TTTAAAAATAAAAAACAAAC+AGG + chr4_1:42703645-42703664 None:intergenic 10.0%
!!! TTAAAATATAAAATGTTTTC+TGG - chr4_1:42703676-42703695 Msa0548570:intron 10.0%
!!! TAAAATATAAAATGTTTTCT+GGG - chr4_1:42703677-42703696 Msa0548570:intron 10.0%
!! AAGAAAATTAAAATAACAAC+CGG + chr4_1:42700891-42700910 None:intergenic 15.0%
!!! GTTATTTTAATTTTCTTATG+TGG - chr4_1:42700894-42700913 Msa0548570:intron 15.0%
!!! TATTTTAATTTTCTTATGTG+GGG - chr4_1:42700896-42700915 Msa0548570:intron 15.0%
!! ATAAGCTAATTTATTCAAAA+TGG + chr4_1:42701763-42701782 None:intergenic 15.0%
!!! TGAAAATCATGTTTTTTTAT+GGG + chr4_1:42701818-42701837 None:intergenic 15.0%
!!! TTGAAAATCATGTTTTTTTA+TGG + chr4_1:42701819-42701838 None:intergenic 15.0%
!! ATTACAAAAAAATAATTCTG+TGG + chr4_1:42703879-42703898 None:intergenic 15.0%
!! TGAAATAATTCATTATATCT+TGG - chr4_1:42704395-42704414 Msa0548570:intron 15.0%
!! AATTAACGAATCAAATTGAT+GGG + chr4_1:42699885-42699904 None:intergenic 20.0%
!!! TGTCTTAATTTTGATGAAAT+TGG - chr4_1:42700203-42700222 Msa0548570:CDS 20.0%
!!! GTCTTAATTTTGATGAAATT+GGG - chr4_1:42700204-42700223 Msa0548570:CDS 20.0%
!! ATAACTTCAAATATATTGCA+AGG - chr4_1:42700864-42700883 Msa0548570:intron 20.0%
!!! ATTTTAATTTTCTTATGTGG+GGG - chr4_1:42700897-42700916 Msa0548570:intron 20.0%
!! TTTGTTGATATCTTAACATA+GGG + chr4_1:42701678-42701697 None:intergenic 20.0%
!!! TTTTGTTGATATCTTAACAT+AGG + chr4_1:42701679-42701698 None:intergenic 20.0%
!! TTATTATCATATTGCTAATG+TGG - chr4_1:42702160-42702179 Msa0548570:intron 20.0%
!! TTATTTGAATTCATTTGTTC+AGG - chr4_1:42702837-42702856 Msa0548570:intron 20.0%
!! TCATCAATAAATACTATACT+GGG + chr4_1:42703150-42703169 None:intergenic 20.0%
!! AAGTACTTTAAATCAATTGT+TGG - chr4_1:42703233-42703252 Msa0548570:intron 20.0%
!!! TCAAATAAATCTGAAATATC+TGG + chr4_1:42703404-42703423 None:intergenic 20.0%
!! ACAATTATCTGAAGATTATT+TGG - chr4_1:42704006-42704025 Msa0548570:intron 20.0%
!! TATTATCAGTAGTTGAAAAA+AGG + chr4_1:42704044-42704063 None:intergenic 20.0%
!! ATGTGAAACAAAATAAGTAA+TGG + chr4_1:42704422-42704441 None:intergenic 20.0%
!!! TTAAATCTATCGTAATTTGT+GGG + chr4_1:42704938-42704957 None:intergenic 20.0%
!! AAACATAAACTTAACTATGT+GGG + chr4_1:42705055-42705074 None:intergenic 20.0%
! AAAAACGAGATACGATAAAA+TGG + chr4_1:42699694-42699713 None:intergenic 25.0%
!!! AGCATGATTTTTTCAAGAAT+TGG - chr4_1:42699815-42699834 Msa0548570:three_prime_UTR 25.0%
!!! GCATGATTTTTTCAAGAATT+GGG - chr4_1:42699816-42699835 Msa0548570:three_prime_UTR 25.0%
! GAATTAACGAATCAAATTGA+TGG + chr4_1:42699886-42699905 None:intergenic 25.0%
! TTTATCGATGATGTTGAAAA+TGG - chr4_1:42700012-42700031 Msa0548570:CDS 25.0%
!!! ATGATGTTGAAAATGGATTA+GGG - chr4_1:42700019-42700038 Msa0548570:CDS 25.0%
!!! AAAATGGATTAGGGTTTTTA+AGG - chr4_1:42700028-42700047 Msa0548570:CDS 25.0%
!!! AAATGGATTAGGGTTTTTAA+GGG - chr4_1:42700029-42700048 Msa0548570:CDS 25.0%
!! TAACTTACTCTTTTTCTTTG+GGG + chr4_1:42700163-42700182 None:intergenic 25.0%
!! CTAACTTACTCTTTTTCTTT+GGG + chr4_1:42700164-42700183 None:intergenic 25.0%
! CAAAGAAAAAGAGTAAGTTA+GGG - chr4_1:42700163-42700182 Msa0548570:CDS 25.0%
!! TTTTGATGAAATTGGGAAAA+TGG - chr4_1:42700211-42700230 Msa0548570:CDS 25.0%
! TTTGATGAAATTGGGAAAAT+GGG - chr4_1:42700212-42700231 Msa0548570:CDS 25.0%
!!! TTATGAAAAGTTTTATCCCA+AGG - chr4_1:42700282-42700301 Msa0548570:CDS 25.0%
! AATTACTCTCAATTAGTGTT+GGG - chr4_1:42700475-42700494 Msa0548570:intron 25.0%
!! TTCTCTCAATCATATGATTT+TGG - chr4_1:42700568-42700587 Msa0548570:intron 25.0%
!!! TTTTGAGGTATTTATATGTG+TGG - chr4_1:42700606-42700625 Msa0548570:CDS 25.0%
!! TTTGAGGTATTTATATGTGT+GGG - chr4_1:42700607-42700626 Msa0548570:CDS 25.0%
!!! TTTTAATTTTCTTATGTGGG+GGG - chr4_1:42700898-42700917 Msa0548570:intron 25.0%
! GACTTGTAAACTTATGTTTA+AGG + chr4_1:42701016-42701035 None:intergenic 25.0%
! TAAACATAAGTTTACAAGTC+AGG - chr4_1:42701016-42701035 Msa0548570:intron 25.0%
! AAACATAAGTTTACAAGTCA+GGG - chr4_1:42701017-42701036 Msa0548570:intron 25.0%
! CTGATACTATCTTAGAATTT+GGG + chr4_1:42701090-42701109 None:intergenic 25.0%
! TCTGATACTATCTTAGAATT+TGG + chr4_1:42701091-42701110 None:intergenic 25.0%
! TGAACATAAGTTTATAAGTG+AGG - chr4_1:42701246-42701265 Msa0548570:intron 25.0%
! GAACATAAGTTTATAAGTGA+GGG - chr4_1:42701247-42701266 Msa0548570:intron 25.0%
!! ATCGATGTTCAATTTTCAAT+CGG + chr4_1:42701362-42701381 None:intergenic 25.0%
! CTAATAGTATTCTTGTGTAA+TGG + chr4_1:42701430-42701449 None:intergenic 25.0%
!! ATTACATATTCGAGCTTTAT+AGG + chr4_1:42701509-42701528 None:intergenic 25.0%
! TAAAGCTCGAATATGTAATA+CGG - chr4_1:42701510-42701529 Msa0548570:CDS 25.0%
!!! AAAAACATGATTTTCAAGTC+TGG - chr4_1:42701822-42701841 Msa0548570:CDS 25.0%
! AAAACAGTTCAAGATAATGT+TGG + chr4_1:42701882-42701901 None:intergenic 25.0%
! AATATGCAGATACATATCTT+AGG + chr4_1:42701962-42701981 None:intergenic 25.0%
! AAGATATGTATCTGCATATT+TGG - chr4_1:42701962-42701981 Msa0548570:CDS 25.0%
! AGATATGTATCTGCATATTT+GGG - chr4_1:42701963-42701982 Msa0548570:CDS 25.0%
!!! ATAACAATTTTGATACGTCT+AGG - chr4_1:42702014-42702033 Msa0548570:CDS 25.0%
!!! AAAGCTTATTTTTAAACTCC+TGG + chr4_1:42702216-42702235 None:intergenic 25.0%
!! GGAGTTTAAAAATAAGCTTT+TGG - chr4_1:42702216-42702235 Msa0548570:intron 25.0%
! ATTTCAGAAGAATACATAAC+AGG + chr4_1:42702469-42702488 None:intergenic 25.0%
!! TGTTATGTATTCTTCTGAAA+TGG - chr4_1:42702468-42702487 Msa0548570:CDS 25.0%
! AGACAAAAATACCAAAAACA+AGG - chr4_1:42702654-42702673 Msa0548570:CDS 25.0%
! AAAAATACCAAAAACAAGGT+TGG - chr4_1:42702658-42702677 Msa0548570:CDS 25.0%
! GTGATTTATTCTTCATGAAT+TGG - chr4_1:42702680-42702699 Msa0548570:CDS 25.0%
!!! GTTTATTTTAAAGATGTTGC+TGG - chr4_1:42702859-42702878 Msa0548570:intron 25.0%
! CTCATCAATAAATACTATAC+TGG + chr4_1:42703151-42703170 None:intergenic 25.0%
! TACTTTAAATCAATTGTTGG+TGG - chr4_1:42703236-42703255 Msa0548570:intron 25.0%
!! AAAAACAAACAGGCTTTTAA+AGG + chr4_1:42703635-42703654 None:intergenic 25.0%
!! TATAAAATGTTTTCTGGGTT+TGG - chr4_1:42703682-42703701 Msa0548570:intron 25.0%
!! TAATTTAAGACATCATGATG+AGG - chr4_1:42703970-42703989 Msa0548570:intron 25.0%
! TATCTGAAGATTATTTGGAT+TGG - chr4_1:42704011-42704030 Msa0548570:intron 25.0%
!! ACAATAGTTACTTTCAACAA+AGG + chr4_1:42704182-42704201 None:intergenic 25.0%
! AGCAATGAATAAAAGAAAAG+AGG + chr4_1:42704358-42704377 None:intergenic 25.0%
!!! TGTATATCAGTGTTTTTTTG+TGG + chr4_1:42704491-42704510 None:intergenic 25.0%
! ATCTCATGACTTACAATATT+GGG + chr4_1:42704537-42704556 None:intergenic 25.0%
! CTTAAATCTATCGTAATTTG+TGG + chr4_1:42704939-42704958 None:intergenic 25.0%
! AATTACGATAGATTTAAGCT+AGG - chr4_1:42704941-42704960 Msa0548570:CDS 25.0%
! ATTACGATAGATTTAAGCTA+GGG - chr4_1:42704942-42704961 Msa0548570:CDS 25.0%
! CAAACATAAACTTAACTATG+TGG + chr4_1:42705056-42705075 None:intergenic 25.0%
ATGGTGATATTTGTAGTTGT+CGG + chr4_1:42699675-42699694 None:intergenic 30.0%
TTGAAGAAACAATGGTAACT+AGG + chr4_1:42699795-42699814 None:intergenic 30.0%
!! ATCATGCTTTGAAGAAACAA+TGG + chr4_1:42699803-42699822 None:intergenic 30.0%
! GATGATGTTGAAAATGGATT+AGG - chr4_1:42700018-42700037 Msa0548570:CDS 30.0%
!!! AATGGATTAGGGTTTTTAAG+GGG - chr4_1:42700030-42700049 Msa0548570:CDS 30.0%
! CCTAACTTACTCTTTTTCTT+TGG + chr4_1:42700165-42700184 None:intergenic 30.0%
CCAAAGAAAAAGAGTAAGTT+AGG - chr4_1:42700162-42700181 Msa0548570:CDS 30.0%
GAGAAAAAATCTGAGTCTAA+AGG - chr4_1:42700331-42700350 Msa0548570:intron 30.0%
! TCTTGTGTTATTGTTAGTTG+TGG - chr4_1:42700389-42700408 Msa0548570:intron 30.0%
GAATTACTCTCAATTAGTGT+TGG - chr4_1:42700474-42700493 Msa0548570:intron 30.0%
TTGAGAGAAAACATGTTGTT+GGG + chr4_1:42700557-42700576 None:intergenic 30.0%
ATTGAGAGAAAACATGTTGT+TGG + chr4_1:42700558-42700577 None:intergenic 30.0%
!!! TCTGTACTGGTTTAATTTTG+AGG - chr4_1:42700591-42700610 Msa0548570:intron 30.0%
! TTGAGGTATTTATATGTGTG+GGG - chr4_1:42700608-42700627 Msa0548570:CDS 30.0%
TTCAAATATATTGCAAGGTC+CGG - chr4_1:42700869-42700888 Msa0548570:intron 30.0%
GATCTATAAATATCCGTGTT+CGG - chr4_1:42700950-42700969 Msa0548570:intron 30.0%
! ACTATCTTAGAATTTGGGTT+GGG + chr4_1:42701085-42701104 None:intergenic 30.0%
TACTATCTTAGAATTTGGGT+TGG + chr4_1:42701086-42701105 None:intergenic 30.0%
AACTTCATCTCATTCAATGT+GGG + chr4_1:42701226-42701245 None:intergenic 30.0%
AAACTTCATCTCATTCAATG+TGG + chr4_1:42701227-42701246 None:intergenic 30.0%
TTAACTCATCCTTACAAAAC+TGG + chr4_1:42701291-42701310 None:intergenic 30.0%
!! AACATCTAGCCTTAGAATAT+GGG + chr4_1:42701320-42701339 None:intergenic 30.0%
!! TAACATCTAGCCTTAGAATA+TGG + chr4_1:42701321-42701340 None:intergenic 30.0%
TCAAAATGGTTGTGAATTGT+TGG + chr4_1:42701749-42701768 None:intergenic 30.0%
!!! TCATGTTTTTTTATGGGTGA+TGG + chr4_1:42701812-42701831 None:intergenic 30.0%
TAATGTTGGACTTCTTGAAT+TGG + chr4_1:42701868-42701887 None:intergenic 30.0%
TTAAAATGTGAGACAGTTGT+AGG + chr4_1:42701925-42701944 None:intergenic 30.0%
CATATCTTAGGAAAGATGAA+GGG + chr4_1:42701950-42701969 None:intergenic 30.0%
ACATATCTTAGGAAAGATGA+AGG + chr4_1:42701951-42701970 None:intergenic 30.0%
!!! AAAAATAAGCTTTTGGAACC+AGG - chr4_1:42702223-42702242 Msa0548570:intron 30.0%
! ATTTGTTGGAGACAACAATA+TGG + chr4_1:42702258-42702277 None:intergenic 30.0%
!!! TATTTTGGCAACTGATTTGT+TGG + chr4_1:42702272-42702291 None:intergenic 30.0%
! AGAGTTCCTCACATATATTT+TGG + chr4_1:42702287-42702306 None:intergenic 30.0%
!! TGTATTCTTCTGAAATGGTT+TGG - chr4_1:42702473-42702492 Msa0548570:CDS 30.0%
!!! TAAATCACCAACCTTGTTTT+TGG + chr4_1:42702668-42702687 None:intergenic 30.0%
GACAAACATTTCCATGAAAT+CGG + chr4_1:42703073-42703092 None:intergenic 30.0%
GATTTCATGGAAATGTTTGT+CGG - chr4_1:42703072-42703091 Msa0548570:intron 30.0%
ATTGATGAGATTGATGCAAT+TGG - chr4_1:42703162-42703181 Msa0548570:intron 30.0%
! AAATCAATTGTTGGTGGAAA+TGG - chr4_1:42703242-42703261 Msa0548570:intron 30.0%
AGCCTTCATATTATTCTCAA+AGG - chr4_1:42703445-42703464 Msa0548570:intron 30.0%
! AGCCTTTGAGAATAATATGA+AGG + chr4_1:42703450-42703469 None:intergenic 30.0%
! GTTAAGCTGTTTAAAACAGT+CGG - chr4_1:42703708-42703727 Msa0548570:intron 30.0%
AAGAGGTGAGTAAACAAAAT+TGG + chr4_1:42704341-42704360 None:intergenic 30.0%
CATCTCATGACTTACAATAT+TGG + chr4_1:42704538-42704557 None:intergenic 30.0%
TATGGTTTCAGTGAAAAAGT+GGG - chr4_1:42704671-42704690 Msa0548570:intron 30.0%
!! GTTTAGTCATTTTGCTGATA+TGG - chr4_1:42705105-42705124 Msa0548570:five_prime_UTR 30.0%
! GAAATAGACTTTGATTAGCT+TGG + chr4_1:42705200-42705219 None:intergenic 30.0%
TGGTGATATTTGTAGTTGTC+GGG + chr4_1:42699674-42699693 None:intergenic 35.0%
!! GTCATGTAGAATTTGTTGCA+CGG - chr4_1:42699943-42699962 Msa0548570:CDS 35.0%
AAACCCATTATTACGAGCTA+TGG + chr4_1:42700070-42700089 None:intergenic 35.0%
! GTTTTATCCCAAGGAAAAGA+AGG - chr4_1:42700291-42700310 Msa0548570:CDS 35.0%
!! CATATGATTTTGGTCTGTAC+TGG - chr4_1:42700578-42700597 Msa0548570:intron 35.0%
! TGAGGTATTTATATGTGTGG+GGG - chr4_1:42700609-42700628 Msa0548570:CDS 35.0%
CAGTTTGTCTTGCGATAAAT+GGG - chr4_1:42700654-42700673 Msa0548570:CDS 35.0%
AGTTTGTCTTGCGATAAATG+GGG - chr4_1:42700655-42700674 Msa0548570:CDS 35.0%
! GAAGTGTTAAAAATTGCTGC+TGG + chr4_1:42700683-42700702 None:intergenic 35.0%
TTTCTTTCATCCCTTTCTCT+TGG - chr4_1:42700816-42700835 Msa0548570:intron 35.0%
TTAACACACTCACACCTTTA+CGG + chr4_1:42701198-42701217 None:intergenic 35.0%
! TAAAGGTGTGAGTGTGTTAA+GGG - chr4_1:42701198-42701217 Msa0548570:intron 35.0%
ACTTCATCTCATTCAATGTG+GGG + chr4_1:42701225-42701244 None:intergenic 35.0%
TAAACCCAACCCATATTCTA+AGG - chr4_1:42701308-42701327 Msa0548570:CDS 35.0%
!! TTTCCATGTTTTTGCTTGCT+TGG - chr4_1:42701470-42701489 Msa0548570:CDS 35.0%
ATACCAAGCAAGCAAAAACA+TGG + chr4_1:42701476-42701495 None:intergenic 35.0%
ACAATATGGTCTACTAATCC+TGG + chr4_1:42702244-42702263 None:intergenic 35.0%
CAGTTGCCAAAATATATGTG+AGG - chr4_1:42702278-42702297 Msa0548570:CDS 35.0%
GGTCGTGGAATATTTAACAT+TGG - chr4_1:42702610-42702629 Msa0548570:CDS 35.0%
CCTAAAGAAAAAGTGGACAT+GGG + chr4_1:42702763-42702782 None:intergenic 35.0%
!!! CCATGTCCACTTTTTCTTTA+GGG - chr4_1:42702761-42702780 Msa0548570:intron 35.0%
ACAACTCCCTAAAGAAAAAG+TGG + chr4_1:42702770-42702789 None:intergenic 35.0%
!! ACTTTTTCTTTAGGGAGTTG+TGG - chr4_1:42702769-42702788 Msa0548570:intron 35.0%
CGTATTTCTTAGGATTCTTG+AGG + chr4_1:42702927-42702946 None:intergenic 35.0%
!!! AAGAGCACCTTTTGGAATTT+TGG + chr4_1:42702962-42702981 None:intergenic 35.0%
!!! TGCAGTTGCTTTTGCTAAAA+GGG + chr4_1:42703013-42703032 None:intergenic 35.0%
! TTTTAGCAAAAGCAACTGCA+GGG - chr4_1:42703013-42703032 Msa0548570:intron 35.0%
GAACCAGATATGGAAAGAAA+TGG + chr4_1:42703051-42703070 None:intergenic 35.0%
ATGAGATTGATGCAATTGGT+CGG - chr4_1:42703166-42703185 Msa0548570:intron 35.0%
TATTAGACAACGCCTTACTT+AGG - chr4_1:42703322-42703341 Msa0548570:intron 35.0%
GTACATCAATTGATATCGTG+CGG + chr4_1:42703362-42703381 None:intergenic 35.0%
ATTGATGTACCCGACATTAA+AGG - chr4_1:42703372-42703391 Msa0548570:intron 35.0%
TGATGAATCACAAGTCACAA+TGG - chr4_1:42703548-42703567 Msa0548570:intron 35.0%
AATACTCATGTTTCTTGCCT+AGG - chr4_1:42704073-42704092 Msa0548570:CDS 35.0%
TTCCAGCTTACTTATTACCT+AGG + chr4_1:42704093-42704112 None:intergenic 35.0%
AGGTAATAAGTAAGCTGGAA+AGG - chr4_1:42704093-42704112 Msa0548570:CDS 35.0%
AAAGTAACTATTGTTCCTCG+CGG - chr4_1:42704188-42704207 Msa0548570:intron 35.0%
GTTCTCACTAGGAACATATT+GGG + chr4_1:42704234-42704253 None:intergenic 35.0%
AAATGATGAAACAACCTGCT+CGG + chr4_1:42704318-42704337 None:intergenic 35.0%
!! TACAATATTGGGAAGCATCA+AGG + chr4_1:42704526-42704545 None:intergenic 35.0%
AAGTCATGAGATGAGTATGA+TGG - chr4_1:42704545-42704564 Msa0548570:intron 35.0%
! ATGGTTTCTGTCCCTTTTTA+CGG - chr4_1:42704564-42704583 Msa0548570:CDS 35.0%
TATTTGGGCATATGTCATCT+TGG + chr4_1:42704645-42704664 None:intergenic 35.0%
TACTGGTAACATCATTGATC+AGG - chr4_1:42704748-42704767 Msa0548570:CDS 35.0%
GTGTTCTTCTATAAGCTGTA+TGG + chr4_1:42704810-42704829 None:intergenic 35.0%
ACAGCTTATAGAAGAACACA+AGG - chr4_1:42704811-42704830 Msa0548570:CDS 35.0%
TCTGCCATAGCTCGTAATAA+TGG - chr4_1:42700063-42700082 Msa0548570:CDS 40.0%
CTGCCATAGCTCGTAATAAT+GGG - chr4_1:42700064-42700083 Msa0548570:CDS 40.0%
AATCAATTGCTGCAAACCCT+AGG - chr4_1:42700112-42700131 Msa0548570:CDS 40.0%
AAAACATGCGATGAAGCCTA+GGG + chr4_1:42700131-42700150 None:intergenic 40.0%
!! GAAAAGAAGGAAGTGCCAAA+GGG - chr4_1:42700304-42700323 Msa0548570:CDS 40.0%
!!! GATTTTTTCTCCTCTCCCTT+TGG + chr4_1:42700322-42700341 None:intergenic 40.0%
CCATTTATCGCAAGACAAAC+TGG + chr4_1:42700656-42700675 None:intergenic 40.0%
CCAGTTTGTCTTGCGATAAA+TGG - chr4_1:42700653-42700672 Msa0548570:CDS 40.0%
TGAGTCAAAGTCAAACACAG+AGG - chr4_1:42700719-42700738 Msa0548570:CDS 40.0%
TCAAAGTCAAACACAGAGGA+TGG - chr4_1:42700723-42700742 Msa0548570:CDS 40.0%
AAACTATCTCACCCCATTGT+TGG - chr4_1:42700782-42700801 Msa0548570:CDS 40.0%
! TAATTTTCTTATGTGGGGGG+AGG - chr4_1:42700901-42700920 Msa0548570:intron 40.0%
! AATTTTCTTATGTGGGGGGA+GGG - chr4_1:42700902-42700921 Msa0548570:intron 40.0%
AACTCAAACAATGCCGAACA+CGG + chr4_1:42700966-42700985 None:intergenic 40.0%
TTGAGTTAAGAGTCCTACAC+TGG - chr4_1:42700979-42700998 Msa0548570:intron 40.0%
! GTCCTACACTGGATTAGATA+AGG - chr4_1:42700990-42701009 Msa0548570:intron 40.0%
CCTTACAAAACTGTCTAGTG+AGG + chr4_1:42701052-42701071 None:intergenic 40.0%
!! CCTCACTAGACAGTTTTGTA+AGG - chr4_1:42701049-42701068 Msa0548570:intron 40.0%
! GTAAAGGTGTGAGTGTGTTA+AGG - chr4_1:42701197-42701216 Msa0548570:intron 40.0%
! AAAGGTGTGAGTGTGTTAAG+GGG - chr4_1:42701199-42701218 Msa0548570:intron 40.0%
CCTTACAAAACTGGTCAGTA+AGG + chr4_1:42701282-42701301 None:intergenic 40.0%
!! CCTTACTGACCAGTTTTGTA+AGG - chr4_1:42701279-42701298 Msa0548570:intron 40.0%
!! CTAGCCTTAGAATATGGGTT+GGG + chr4_1:42701315-42701334 None:intergenic 40.0%
!! TCTAGCCTTAGAATATGGGT+TGG + chr4_1:42701316-42701335 None:intergenic 40.0%
AATGGTTGTGAATTGTTGGC+TGG + chr4_1:42701745-42701764 None:intergenic 40.0%
! TTATGGGTGATGGTAATGTG+AGG + chr4_1:42701802-42701821 None:intergenic 40.0%
CAATACTTCGAGGTTACACA+TGG + chr4_1:42702048-42702067 None:intergenic 40.0%
CATGTGTAACCTCGAAGTAT+TGG - chr4_1:42702046-42702065 Msa0548570:intron 40.0%
TATCGGATACCAATACTTCG+AGG + chr4_1:42702058-42702077 None:intergenic 40.0%
CAATTCAAAGGCTCGCATAT+CGG + chr4_1:42702075-42702094 None:intergenic 40.0%
GATGACTCTACATCTTTGTC+TGG - chr4_1:42702118-42702137 Msa0548570:intron 40.0%
!! TTCTCTGCAGATTAGTTTCC+AGG - chr4_1:42702195-42702214 Msa0548570:intron 40.0%
TTCGCTGTCTGCTTGATTAA+GGG + chr4_1:42702311-42702330 None:intergenic 40.0%
!!! TGGAAGTGTTGAGTCTTTTG+AGG - chr4_1:42702390-42702409 Msa0548570:CDS 40.0%
!! GTCTTTTGAGGAGAAGTTAG+AGG - chr4_1:42702402-42702421 Msa0548570:CDS 40.0%
!! TTCTGAAATGGTTTGGTACC+AGG - chr4_1:42702480-42702499 Msa0548570:CDS 40.0%
GAGAGTTCCCAAAATCAACA+GGG + chr4_1:42702527-42702546 None:intergenic 40.0%
AGAGAGTTCCCAAAATCAAC+AGG + chr4_1:42702528-42702547 None:intergenic 40.0%
!!! TGTTGATTTTGGGAACTCTC+TGG - chr4_1:42702527-42702546 Msa0548570:CDS 40.0%
! TTTGGGAACTCTCTGGTTTA+TGG - chr4_1:42702534-42702553 Msa0548570:CDS 40.0%
! TTGGGAACTCTCTGGTTTAT+GGG - chr4_1:42702535-42702554 Msa0548570:CDS 40.0%
! TTTATGGGAAGGAAAGTGCA+AGG - chr4_1:42702550-42702569 Msa0548570:CDS 40.0%
GGAAAGGCAATGATCAACTA+GGG + chr4_1:42702742-42702761 None:intergenic 40.0%
AGAAAAAGTGGACATGGGAA+AGG + chr4_1:42702758-42702777 None:intergenic 40.0%
!!! CCCATGTCCACTTTTTCTTT+AGG - chr4_1:42702760-42702779 Msa0548570:intron 40.0%
CCCTAAAGAAAAAGTGGACA+TGG + chr4_1:42702764-42702783 None:intergenic 40.0%
CGAGGCAAAGCAAGAAATTA+TGG - chr4_1:42702888-42702907 Msa0548570:intron 40.0%
CCAAGCTCTTCGTATTTCTT+AGG + chr4_1:42702937-42702956 None:intergenic 40.0%
CCTAAGAAATACGAAGAGCT+TGG - chr4_1:42702934-42702953 Msa0548570:intron 40.0%
!! CTTGGTGCCAAAATTCCAAA+AGG - chr4_1:42702952-42702971 Msa0548570:intron 40.0%
!! AATTCCAAAAGGTGCTCTTC+TGG - chr4_1:42702963-42702982 Msa0548570:intron 40.0%
!!! CTGCAGTTGCTTTTGCTAAA+AGG + chr4_1:42703014-42703033 None:intergenic 40.0%
! CTTTTAGCAAAAGCAACTGC+AGG - chr4_1:42703012-42703031 Msa0548570:intron 40.0%
TTTAGCAAAAGCAACTGCAG+GGG - chr4_1:42703014-42703033 Msa0548570:intron 40.0%
!! GTGCCATTTCTTTCCATATC+TGG - chr4_1:42703045-42703064 Msa0548570:intron 40.0%
CATGAAATCGGAACCAGATA+TGG + chr4_1:42703061-42703080 None:intergenic 40.0%
! CATATCTGGTTCCGATTTCA+TGG - chr4_1:42703059-42703078 Msa0548570:intron 40.0%
ATGGAAATGTTTGTCGGTGT+TGG - chr4_1:42703078-42703097 Msa0548570:intron 40.0%
!! GAAACTTGTTTCTGGAAGCA+AGG - chr4_1:42703115-42703134 Msa0548570:intron 40.0%
TTGATGCAATTGGTCGGAAA+AGG - chr4_1:42703172-42703191 Msa0548570:intron 40.0%
TGATGCAATTGGTCGGAAAA+GGG - chr4_1:42703173-42703192 Msa0548570:intron 40.0%
! CAATTGTTGGTGGAAATGGA+TGG - chr4_1:42703246-42703265 Msa0548570:intron 40.0%
! TTGGTGGAAATGGATGGTTT+TGG - chr4_1:42703252-42703271 Msa0548570:intron 40.0%
GAGAATAATATGAAGGCTCG+TGG + chr4_1:42703443-42703462 None:intergenic 40.0%
AGTCACAATGGATCATTTCG+AGG - chr4_1:42703560-42703579 Msa0548570:intron 40.0%
! TGGTTTGGAGAAGAAGAACA+GGG - chr4_1:42703605-42703624 Msa0548570:intron 40.0%
TGCCTAGGTAATAAGTAAGC+TGG - chr4_1:42704088-42704107 Msa0548570:CDS 40.0%
GGTTCTCACTAGGAACATAT+TGG + chr4_1:42704235-42704254 None:intergenic 40.0%
! GATATGACTTGTATGACCCT+TGG - chr4_1:42704281-42704300 Msa0548570:intron 40.0%
ATGAGAACCTGCCGTAAAAA+GGG + chr4_1:42704578-42704597 None:intergenic 40.0%
AATGAGAACCTGCCGTAAAA+AGG + chr4_1:42704579-42704598 None:intergenic 40.0%
! TTTTTACGGCAGGTTCTCAT+TGG - chr4_1:42704578-42704597 Msa0548570:CDS 40.0%
AGTACTTCACCAAGATGACT+TGG - chr4_1:42704874-42704893 Msa0548570:CDS 40.0%
AGATTCGAACCAAGTCATCT+TGG + chr4_1:42704886-42704905 None:intergenic 40.0%
!! AGATGACTTGGTTCGAATCT+TGG - chr4_1:42704886-42704905 Msa0548570:CDS 40.0%
!! GATGACTTGGTTCGAATCTT+GGG - chr4_1:42704887-42704906 Msa0548570:CDS 40.0%
TAAGCTAGGGTTTCAAGATG+AGG - chr4_1:42704955-42704974 Msa0548570:intron 40.0%
GCTGATATGGACAACTTGTA+CGG - chr4_1:42705118-42705137 Msa0548570:five_prime_UTR 40.0%
TTGCACGGTGAAGCAAGATT+GGG - chr4_1:42699958-42699977 Msa0548570:CDS 45.0%
GCAAGATTGGGAACGCTTTA+TGG - chr4_1:42699970-42699989 Msa0548570:CDS 45.0%
GAAAACATGCGATGAAGCCT+AGG + chr4_1:42700132-42700151 None:intergenic 45.0%
! GGCACTTCCTTCTTTTCCTT+GGG + chr4_1:42700301-42700320 None:intergenic 45.0%
! TGGCACTTCCTTCTTTTCCT+TGG + chr4_1:42700302-42700321 None:intergenic 45.0%
!! GGAAAAGAAGGAAGTGCCAA+AGG - chr4_1:42700303-42700322 Msa0548570:CDS 45.0%
AAGTCAAACACAGAGGATGG+AGG - chr4_1:42700726-42700745 Msa0548570:CDS 45.0%
ATAGTCCCACCACCAACAAT+GGG + chr4_1:42700797-42700816 None:intergenic 45.0%
AATAGTCCCACCACCAACAA+TGG + chr4_1:42700798-42700817 None:intergenic 45.0%
ATCACGAGGACCAAGAGAAA+GGG + chr4_1:42700829-42700848 None:intergenic 45.0%
! ATTTTCTTATGTGGGGGGAG+GGG - chr4_1:42700903-42700922 Msa0548570:intron 45.0%
! GGCCTTATCTAATCCAGTGT+AGG + chr4_1:42700995-42701014 None:intergenic 45.0%
AGACAGTTGTAGGACATCAG+TGG + chr4_1:42701915-42701934 None:intergenic 45.0%
AGACGTGCGGTTCAATTCAA+AGG + chr4_1:42702087-42702106 None:intergenic 45.0%
TCTCATTGCTAAGAGACGTG+CGG + chr4_1:42702100-42702119 None:intergenic 45.0%
TCGCTGTCTGCTTGATTAAG+GGG + chr4_1:42702310-42702329 None:intergenic 45.0%
CTTCGCTGTCTGCTTGATTA+AGG + chr4_1:42702312-42702331 None:intergenic 45.0%
GCGCAAATCTCATTAACTCC+TGG + chr4_1:42702501-42702520 None:intergenic 45.0%
GTTCCCAAAATCAACAGGGT+TGG + chr4_1:42702523-42702542 None:intergenic 45.0%
! GAACTCTCTGGTTTATGGGA+AGG - chr4_1:42702539-42702558 Msa0548570:CDS 45.0%
! AGGAAAGTGCAAGGTGGATT+TGG - chr4_1:42702559-42702578 Msa0548570:CDS 45.0%
GGGAAAGGCAATGATCAACT+AGG + chr4_1:42702743-42702762 None:intergenic 45.0%
! AAAGGGTTTTTCCTGTGCCT+GGG + chr4_1:42702996-42703015 None:intergenic 45.0%
! AAAAGGGTTTTTCCTGTGCC+TGG + chr4_1:42702997-42703016 None:intergenic 45.0%
AACAAGTTTCTCACCCTGGA+TGG + chr4_1:42703105-42703124 None:intergenic 45.0%
CAGAAACAAGTTTCTCACCC+TGG + chr4_1:42703109-42703128 None:intergenic 45.0%
! CAGGGTGAGAAACTTGTTTC+TGG - chr4_1:42703107-42703126 Msa0548570:intron 45.0%
GATGCAATTGGTCGGAAAAG+GGG - chr4_1:42703174-42703193 Msa0548570:intron 45.0%
TGGTCACGACCTTTAATGTC+GGG + chr4_1:42703384-42703403 None:intergenic 45.0%
CTGGTCACGACCTTTAATGT+CGG + chr4_1:42703385-42703404 None:intergenic 45.0%
TCCAGCAAATCCTGGAGTAA+GGG + chr4_1:42703478-42703497 None:intergenic 45.0%
ATTTCGAGGCAGCTATCGAT+AGG - chr4_1:42703574-42703593 Msa0548570:intron 45.0%
GCAGCTATCGATAGGATCAT+TGG - chr4_1:42703582-42703601 Msa0548570:intron 45.0%
GCTATCGATAGGATCATTGG+TGG - chr4_1:42703585-42703604 Msa0548570:intron 45.0%
! CGATAGGATCATTGGTGGTT+TGG - chr4_1:42703590-42703609 Msa0548570:intron 45.0%
! GTGGTTTGGAGAAGAAGAAC+AGG - chr4_1:42703604-42703623 Msa0548570:intron 45.0%
TTGGAGAAGAAGAACAGGGT+AGG - chr4_1:42703609-42703628 Msa0548570:intron 45.0%
TTCCTAGTGAGAACCTTCTC+AGG - chr4_1:42704240-42704259 Msa0548570:intron 45.0%
TGAGAACCTTCTCAGGACAA+AGG - chr4_1:42704247-42704266 Msa0548570:intron 45.0%
! ATGACTTGTATGACCCTTGG+TGG - chr4_1:42704284-42704303 Msa0548570:intron 45.0%
! TTTCTGTCCCTTTTTACGGC+AGG - chr4_1:42704568-42704587 Msa0548570:CDS 45.0%
!! CAAGTCATTTTGTGCTCCAG+TGG + chr4_1:42704612-42704631 None:intergenic 45.0%
CACTGGAGCACAAAATGACT+TGG - chr4_1:42704610-42704629 Msa0548570:CDS 45.0%
!! CATTTTGAGGGAAAGAGAGG+AGG + chr4_1:42704697-42704716 None:intergenic 45.0%
!! CGTCATTTTGAGGGAAAGAG+AGG + chr4_1:42704700-42704719 None:intergenic 45.0%
!! CAAACGCGTCGTCATTTTGA+GGG + chr4_1:42704709-42704728 None:intergenic 45.0%
CTCAAAATGACGACGCGTTT+GGG - chr4_1:42704708-42704727 Msa0548570:intron 45.0%
! TTGATCAGGAAGTGCGAGAT+TGG - chr4_1:42704762-42704781 Msa0548570:CDS 45.0%
! TGATCAGGAAGTGCGAGATT+GGG - chr4_1:42704763-42704782 Msa0548570:CDS 45.0%
AACTATGTGGGAACAACCTC+AGG + chr4_1:42705043-42705062 None:intergenic 45.0%
!!! TTTATTAATGATTTTTAATT+GGG - chr4_1:42699921-42699940 Msa0548570:CDS 5.0%
!!! AAACATTTTATATTTTAAAA+AGG + chr4_1:42703674-42703693 None:intergenic 5.0%
GTTGCACGGTGAAGCAAGAT+TGG - chr4_1:42699957-42699976 Msa0548570:CDS 50.0%
CTATCTCACCCCATTGTTGG+TGG - chr4_1:42700785-42700804 Msa0548570:CDS 50.0%
TAGTCCCACCACCAACAATG+GGG + chr4_1:42700796-42700815 None:intergenic 50.0%
GATCACGAGGACCAAGAGAA+AGG + chr4_1:42700830-42700849 None:intergenic 50.0%
CAGAGTCTATCCAAGATCCG+CGG - chr4_1:42701107-42701126 Msa0548570:intron 50.0%
AGAGTCTATCCAAGATCCGC+GGG - chr4_1:42701108-42701127 Msa0548570:intron 50.0%
! TGCACTCAGGTCACCGTTTT+GGG - chr4_1:42701135-42701154 Msa0548570:intron 50.0%
CGCTCCAGATGTTTAGTCGT+AGG - chr4_1:42701170-42701189 Msa0548570:intron 50.0%
! TTTAGTCGTAGGCGCCGTAA+AGG - chr4_1:42701181-42701200 Msa0548570:intron 50.0%
! TTGGCTGGCTATTGCAGAGA+CGG + chr4_1:42701730-42701749 None:intergenic 50.0%
CAAGGAACCCTTCCTGCAAA+GGG - chr4_1:42702334-42702353 Msa0548570:CDS 50.0%
ACCAGATCCCTTTGCAGGAA+GGG + chr4_1:42702344-42702363 None:intergenic 50.0%
!!! TGCGCCAACCCTGTTGATTT+TGG - chr4_1:42702516-42702535 Msa0548570:CDS 50.0%
!!! GCGCCAACCCTGTTGATTTT+GGG - chr4_1:42702517-42702536 Msa0548570:CDS 50.0%
! ATGGGAAGGAAAGTGCAAGG+TGG - chr4_1:42702553-42702572 Msa0548570:CDS 50.0%
!! GTGCAAGGTGGATTTGGTGT+TGG - chr4_1:42702565-42702584 Msa0548570:CDS 50.0%
!! CAAGGTGGATTTGGTGTTGG+TGG - chr4_1:42702568-42702587 Msa0548570:CDS 50.0%
TCCACTGGTAAGAATGGTCG+TGG - chr4_1:42702595-42702614 Msa0548570:CDS 50.0%
TCCACGACCATTCTTACCAG+TGG + chr4_1:42702599-42702618 None:intergenic 50.0%
!! TCCAAAAGGTGCTCTTCTGG+TGG - chr4_1:42702966-42702985 Msa0548570:intron 50.0%
!! CCAAAAGGTGCTCTTCTGGT+GGG - chr4_1:42702967-42702986 Msa0548570:intron 50.0%
! AAGGGTTTTTCCTGTGCCTG+GGG + chr4_1:42702995-42703014 None:intergenic 50.0%
!!! GATGGTTTTGGAACCACTGC+TGG - chr4_1:42703264-42703283 Msa0548570:intron 50.0%
TAGCACAACAACTCCAGCAG+TGG + chr4_1:42703280-42703299 None:intergenic 50.0%
ACAACGCCTTACTTAGGCCT+GGG - chr4_1:42703328-42703347 Msa0548570:intron 50.0%
AAAACGCCCAGGCCTAAGTA+AGG + chr4_1:42703337-42703356 None:intergenic 50.0%
CTCCAGCAAATCCTGGAGTA+AGG + chr4_1:42703479-42703498 None:intergenic 50.0%
ATGTCTGCTCCAGCAAATCC+TGG + chr4_1:42703486-42703505 None:intergenic 50.0%
AAGCTGCTCTGATTGCTGCA+AGG - chr4_1:42703523-42703542 Msa0548570:intron 50.0%
ACCGTTGCTTACCATGAAGC+AGG - chr4_1:42704119-42704138 Msa0548570:CDS 50.0%
GCCTGCTTCATGGTAAGCAA+CGG + chr4_1:42704123-42704142 None:intergenic 50.0%
AGAACCAACCTGCAACAGCA+TGG + chr4_1:42704145-42704164 None:intergenic 50.0%
!! TGCTGTTGCAGGTTGGTTCT+TGG - chr4_1:42704145-42704164 Msa0548570:CDS 50.0%
GTCCTGAGAAGGTTCTCACT+AGG + chr4_1:42704245-42704264 None:intergenic 50.0%
! CAGGACAAAGGAGCAGCTTT+TGG - chr4_1:42704259-42704278 Msa0548570:intron 50.0%
! CTTGTATGACCCTTGGTGGT+CGG - chr4_1:42704288-42704307 Msa0548570:intron 50.0%
! TTGTATGACCCTTGGTGGTC+GGG - chr4_1:42704289-42704308 Msa0548570:intron 50.0%
!! ATTGGGAAGCATCAAGGAGC+AGG + chr4_1:42704520-42704539 None:intergenic 50.0%
CTCATTGGAGCAATCTCCAC+TGG - chr4_1:42704593-42704612 Msa0548570:CDS 50.0%
!! CCAAACGCGTCGTCATTTTG+AGG + chr4_1:42704710-42704729 None:intergenic 50.0%
CCTCAAAATGACGACGCGTT+TGG - chr4_1:42704707-42704726 Msa0548570:intron 50.0%
GCGTTTGGGAAACCATACAG+CGG - chr4_1:42704722-42704741 Msa0548570:intron 50.0%
AAACCATACAGCGGCGATAC+TGG - chr4_1:42704731-42704750 Msa0548570:intron 50.0%
TTACCAGTATCGCCGCTGTA+TGG + chr4_1:42704737-42704756 None:intergenic 50.0%
GTGGGTTCTGCACTCTTGAA+GGG + chr4_1:42704920-42704939 None:intergenic 50.0%
TGTGGGTTCTGCACTCTTGA+AGG + chr4_1:42704921-42704940 None:intergenic 50.0%
AACCATCGTCGATGAAGCCA+AGG - chr4_1:42704991-42705010 Msa0548570:intron 50.0%
ATCGTCGATGAAGCCAAGGA+GGG - chr4_1:42704995-42705014 Msa0548570:intron 50.0%
!! GTCTTCACCTCTAGAACCTG+AGG - chr4_1:42705024-42705043 Msa0548570:intron 50.0%
! GGAACAACCTCAGGTTCTAG+AGG + chr4_1:42705034-42705053 None:intergenic 50.0%
!! GAAGGAAGTGCCAAAGGGAG+AGG - chr4_1:42700309-42700328 Msa0548570:intron 55.0%
! TCTCACCCCATTGTTGGTGG+TGG - chr4_1:42700788-42700807 Msa0548570:CDS 55.0%
!! CTCACCCCATTGTTGGTGGT+GGG - chr4_1:42700789-42700808 Msa0548570:CDS 55.0%
CTTACCTGCTGCTGATCACG+AGG + chr4_1:42700843-42700862 None:intergenic 55.0%
CAAAACGGTGACCTGAGTGC+AGG + chr4_1:42701136-42701155 None:intergenic 55.0%
! CTGCACTCAGGTCACCGTTT+TGG - chr4_1:42701134-42701153 Msa0548570:intron 55.0%
GGCGCCTACGACTAAACATC+TGG + chr4_1:42701177-42701196 None:intergenic 55.0%
! TGGCTGGCTATTGCAGAGAC+GGG + chr4_1:42701729-42701748 None:intergenic 55.0%
CAAGCAGACAGCGAAGTCCA+AGG - chr4_1:42702316-42702335 Msa0548570:CDS 55.0%
CCTTTGCAGGAAGGGTTCCT+TGG + chr4_1:42702336-42702355 None:intergenic 55.0%
CCAAGGAACCCTTCCTGCAA+AGG - chr4_1:42702333-42702352 Msa0548570:CDS 55.0%
ACCCTTCCTGCAAAGGGATC+TGG - chr4_1:42702340-42702359 Msa0548570:CDS 55.0%
CACCAGATCCCTTTGCAGGA+AGG + chr4_1:42702345-42702364 None:intergenic 55.0%
CTTCCTGCAAAGGGATCTGG+TGG - chr4_1:42702343-42702362 Msa0548570:CDS 55.0%
!! GAGGAAGCGCAAGAAGCACT+AGG - chr4_1:42702421-42702440 Msa0548570:CDS 55.0%
!! GGTGGATTTGGTGTTGGTGG+TGG - chr4_1:42702571-42702590 Msa0548570:CDS 55.0%
GGTGGCTCCACTGGTAAGAA+TGG - chr4_1:42702589-42702608 Msa0548570:CDS 55.0%
! AGATGTTGCTGGCTGTGACG+AGG - chr4_1:42702870-42702889 Msa0548570:intron 55.0%
!!! CCCACCAGAAGAGCACCTTT+TGG + chr4_1:42702970-42702989 None:intergenic 55.0%
! AGGGTTTTTCCTGTGCCTGG+GGG + chr4_1:42702994-42703013 None:intergenic 55.0%
AAAGCAACTGCAGGGGAGTC+TGG - chr4_1:42703021-42703040 Msa0548570:intron 55.0%
!! TTGTCGGTGTTGGACCATCC+AGG - chr4_1:42703088-42703107 Msa0548570:intron 55.0%
!! TGTCGGTGTTGGACCATCCA+GGG - chr4_1:42703089-42703108 Msa0548570:intron 55.0%
ATTGGTCGGAAAAGGGGTCG+TGG - chr4_1:42703180-42703199 Msa0548570:intron 55.0%
GCTGGAGTTGTTGTGCTAGC+AGG - chr4_1:42703282-42703301 Msa0548570:intron 55.0%
GACAACGCCTTACTTAGGCC+TGG - chr4_1:42703327-42703346 Msa0548570:intron 55.0%
GCCCTTACTCCAGGATTTGC+TGG - chr4_1:42703474-42703493 Msa0548570:intron 55.0%
CAACAGCATGGCCTGCTTCA+TGG + chr4_1:42704133-42704152 None:intergenic 55.0%
GCTGCTCCTTTGTCCTGAGA+AGG + chr4_1:42704256-42704275 None:intergenic 55.0%
CTCCTTGGCTTCATCGACGA+TGG + chr4_1:42704996-42705015 None:intergenic 55.0%
CATCGTCGATGAAGCCAAGG+AGG - chr4_1:42704994-42705013 Msa0548570:intron 55.0%
ATGAAGCCAAGGAGGGTGGT+GGG - chr4_1:42705002-42705021 Msa0548570:intron 55.0%
TGGTCCTCGTGATCAGCAGC+AGG - chr4_1:42700836-42700855 Msa0548570:intron 60.0%
!! GGTCACCGTTTTGGGCCACT+CGG - chr4_1:42701143-42701162 Msa0548570:intron 60.0%
!! GTCACCGTTTTGGGCCACTC+GGG - chr4_1:42701144-42701163 Msa0548570:intron 60.0%
GTGACCCGAGTGGCCCAAAA+CGG + chr4_1:42701151-42701170 None:intergenic 60.0%
TGGCCACCAGATCCCTTTGC+AGG + chr4_1:42702349-42702368 None:intergenic 60.0%
AGGGGTCGTGGAGGTTTCTC+TGG - chr4_1:42703192-42703211 Msa0548570:intron 60.0%
ATCGTGCGGTCAAAACGCCC+AGG + chr4_1:42703348-42703367 None:intergenic 60.0%
AGGCTTGCAGCCCTTACTCC+AGG - chr4_1:42703465-42703484 Msa0548570:intron 60.0%
GAAGCAGGCCATGCTGTTGC+AGG - chr4_1:42704134-42704153 Msa0548570:CDS 60.0%
CAGGCCATGCTGTTGCAGGT+TGG - chr4_1:42704138-42704157 Msa0548570:CDS 60.0%
GTCGATGAAGCCAAGGAGGG+TGG - chr4_1:42704998-42705017 Msa0548570:intron 60.0%
GATGAAGCCAAGGAGGGTGG+TGG - chr4_1:42705001-42705020 Msa0548570:intron 60.0%
TGAAGACCCACCACCCTCCT+TGG + chr4_1:42705011-42705030 None:intergenic 60.0%
! CATCTGGAGCGTGACCCGAG+TGG + chr4_1:42701161-42701180 None:intergenic 65.0%
!! GGTGTTGGTGGTGGCTCCAC+TGG - chr4_1:42702580-42702599 Msa0548570:CDS 65.0%
GGTCGGAAAAGGGGTCGTGG+AGG - chr4_1:42703183-42703202 Msa0548570:intron 65.0%
CTCGCGGCACAGCAGCACTT+GGG - chr4_1:42704204-42704223 Msa0548570:intron 65.0%
GTGCAGGTGCCCGCGGATCT+TGG + chr4_1:42701120-42701139 None:intergenic 70.0%
ATCCGCGGGCACCTGCACTC+AGG - chr4_1:42701122-42701141 Msa0548570:intron 70.0%
GACCTGAGTGCAGGTGCCCG+CGG + chr4_1:42701127-42701146 None:intergenic 70.0%
! GCTCTTCTGGTGGGTCCCCC+AGG - chr4_1:42702976-42702995 Msa0548570:intron 70.0%
! CCAAGTGCTGCTGTGCCGCG+AGG + chr4_1:42704206-42704225 None:intergenic 70.0%
CCTCGCGGCACAGCAGCACT+TGG - chr4_1:42704203-42704222 Msa0548570:intron 70.0%
CTCGGCAGCCCGACCACCAA+GGG + chr4_1:42704300-42704319 None:intergenic 70.0%
! CTGGTGGGTCCCCCAGGCAC+AGG - chr4_1:42702982-42703001 Msa0548570:intron 75.0%
GCTCGGCAGCCCGACCACCA+AGG + chr4_1:42704301-42704320 None:intergenic 75.0%
TGGTGGTCGGGCTGCCGAGC+AGG - chr4_1:42704301-42704320 Msa0548570:intron 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 42699671 42705244 42699671 ID=Msa0548570;Name=Msa0548570
chr4_1 mRNA 42699671 42705244 42699671 ID=Msa0548570-mRNA-1;Parent=Msa0548570;Name=Msa0548570-mRNA-1;_AED=0.02;_eAED=0.02;_QI=147|1|1|1|1|1|8|184|807
chr4_1 exon 42699671 42700325 42699671 ID=Msa0548570-mRNA-1:exon:11034;Parent=Msa0548570-mRNA-1
chr4_1 exon 42700593 42700820 42700593 ID=Msa0548570-mRNA-1:exon:11033;Parent=Msa0548570-mRNA-1
chr4_1 exon 42701289 42702056 42701289 ID=Msa0548570-mRNA-1:exon:11032;Parent=Msa0548570-mRNA-1
chr4_1 exon 42702240 42702710 42702240 ID=Msa0548570-mRNA-1:exon:11031;Parent=Msa0548570-mRNA-1
chr4_1 exon 42704058 42704197 42704058 ID=Msa0548570-mRNA-1:exon:11030;Parent=Msa0548570-mRNA-1
chr4_1 exon 42704563 42704634 42704563 ID=Msa0548570-mRNA-1:exon:11029;Parent=Msa0548570-mRNA-1
chr4_1 exon 42704741 42704963 42704741 ID=Msa0548570-mRNA-1:exon:11028;Parent=Msa0548570-mRNA-1
chr4_1 exon 42705047 42705244 42705047 ID=Msa0548570-mRNA-1:exon:11027;Parent=Msa0548570-mRNA-1
chr4_1 five_prime_UTR 42705098 42705244 42705098 ID=Msa0548570-mRNA-1:five_prime_utr;Parent=Msa0548570-mRNA-1
chr4_1 CDS 42705047 42705097 42705047 ID=Msa0548570-mRNA-1:cds;Parent=Msa0548570-mRNA-1
chr4_1 CDS 42704741 42704963 42704741 ID=Msa0548570-mRNA-1:cds;Parent=Msa0548570-mRNA-1
chr4_1 CDS 42704563 42704634 42704563 ID=Msa0548570-mRNA-1:cds;Parent=Msa0548570-mRNA-1
chr4_1 CDS 42704058 42704197 42704058 ID=Msa0548570-mRNA-1:cds;Parent=Msa0548570-mRNA-1
chr4_1 CDS 42702240 42702710 42702240 ID=Msa0548570-mRNA-1:cds;Parent=Msa0548570-mRNA-1
chr4_1 CDS 42701289 42702056 42701289 ID=Msa0548570-mRNA-1:cds;Parent=Msa0548570-mRNA-1
chr4_1 CDS 42700593 42700820 42700593 ID=Msa0548570-mRNA-1:cds;Parent=Msa0548570-mRNA-1
chr4_1 CDS 42699855 42700325 42699855 ID=Msa0548570-mRNA-1:cds;Parent=Msa0548570-mRNA-1
chr4_1 three_prime_UTR 42699671 42699854 42699671 ID=Msa0548570-mRNA-1:three_prime_utr;Parent=Msa0548570-mRNA-1
Gene Sequence

>Msa0548570

ATGATTTTTTCAAGAATTGGGCGTTCTCTATCGCGTTCTTCTCGCGTTAAAAATTTGTTGCACGGTGAAGCAAGATTGGGAACGCTTTATGGAGTTTCGAGAACGAATGTTTTTATCGATGATGTTGAAAATGGATTAGGGTTTTTAAGGGGTTATGTATCTTCTGCCATAGCTCGTAATAATGGGTTTGCTTCAAATTTGTATGATTTTAAATCAATTGCTGCAAACCCTAGGCTTCATCGCATGTTTTCGAGCGAATCCCCAAAGAAAAAGAATTATGAAAAGTTTTATCCCAAGGAAAAGAAGGAAGTGCCAAAGGGAGAGGAGAAAAAATCTGAGTCTAAAGATGAGTCAAAGTCAAACACAGAGGATGGAGGAAGTTTTCACGAAGCTTTTATCAAACAGTTTCAAAACTATCTCACCCCATTGTTGGTGGTGGGACTATTTCTTTCATCCCTTTCTCTTGGTCCTCGTGATCAGCAGCAGATTAGTTTCCAGGAGTTTAAAAATAAGCTTTTGGAACCAGGATTAGTAGACCATATTGTTGTCTCCAACAAATCAGTTGCCAAAATATATGTGAGGAACTCTCCCCTTAATCAAGCAGACAGCGAAGTCCAAGGAACCCTTCCTGCAAAGGGATCTGGTGGCCAATTTAAATATGTAATCAATATTGGAAGTGTTGAGTCTTTTGAGGAGAAGTTAGAGGAAGCGCAAGAAGCACTAGGCGTTGACTCTCACAATTTTGTACCTGTTATGTATTCTTCTGAAATGGTTTGGTACCAGGAGTTAATGAGATTTGCGCCAACCCTGTTGATTTTGGGAACTCTCTGGTTTATGGGAAGGAAAGTGCAAGGTGGATTTGGTGTTGGTGGTGGCTCCACTGGTAAGAATGGTCGTGGAATATTTAACATTGGAAAAGCACATGTTACTAAAGTAGACAAAAATACCAAAAACAAGGTTTATTTTAAAGATGTTGCTGGCTGTGACGAGGCAAAGCAAGAAATTATGGAGTTTGTGCACTTCCTCAAGAATCCTAAGAAATACGAAGAGCTTGGTGCCAAAATTCCAAAAGGTGCTCTTCTGGTGGGTCCCCCAGGCACAGGAAAAACCCTTTTAGCAAAAGCAACTGCAGGGGAGTCTGGTGTGCCATTTCTTTCCATATCTGGTTCCGATTTCATGGAAATGTTTGTCGGTGTTGGACCATCCAGGGTGAGAAACTTGTTTCTGGAAGCAAGGCAGTGTGCTCCCAGTATAGTATTTATTGATGAGATTGATGCAATTGGTCGGAAAAGGGGTCGTGGAGGTTTCTCTGGTTCAAATGATGAGCGTGAAAGTACTTTAAATCAATTGTTGGTGGAAATGGATGGTTTTGGAACCACTGCTGGAGTTGTTGTGCTAGCAGGTACAAATAGAGCTGATATATTAGACAACGCCTTACTTAGGCCTGGGCGTTTTGACCGCACGATATCAATTGATGTACCCGACATTAAAGGTCGTGACCAGATATTTCAGATTTATTTGAAAAAAATCAAACTTGACCACGAGCCTTCATATTATTCTCAAAGGCTTGCAGCCCTTACTCCAGGATTTGCTGGAGCAGACATTGCTAATGTTTGCAATGAAGCTGCTCTGATTGCTGCAAGGACTGATGAATCACAAGTCACAATGGATCATTTCGAGGCAGCTATCGATAGGATCATTGGTGGTTTGGAGAAGAAGAACAGGGTAATAAGTAAGCTGGAAAGGCGTACCGTTGCTTACCATGAAGCAGGCCATGCTGTTGCAGGTTGGTTCTTGGAACATTGTGAGCCTTTGTTGAAAGTAACTATTGTTCCTCGCGGCACAGCAGCACTTGGGTTTGCCCAATATGTTCCTAGTGAGAACCTTCTCAGGACAAAGGAGCAGCTTTTGGATATGACTTGTATGACCCTTGGTGGTCGGGCTGCCGAGCAGGTTCTCATTGGAGCAATCTCCACTGGAGCACAAAATGACTTGGAGAAAGTGACCAAGATGACATATGCCCAAATAGCCATCTATGGTTTCAGTGAAAAAGTGGGCCTCCTCTCTTTCCCTCAAAATGACGACGCGTTTGGGAAACCATACAGCGGCGATACTGGTAACATCATTGATCAGGAAGTGCGAGATTGGGTGAAACATGCATATGAACGTACCATACAGCTTATAGAAGAACACAAGGAGAAAATAGCTCAAATTGCAGAGTTACTTCTCGAAAAAGAAGTACTTCACCAAGATGACTTGGTTCGAATCTTGGGTGAACGACCCTTCAAGAGTGCAGAACCCACAAATTACGATAGATTTAAGCTAGGGTTTCAAGATGAGGAGAAAGCTGCAGAAACCATCGTCGATGAAGCCAAGGAGGGTGGTGGGTCTTCACCTCTAGAACCTGAGGTTGTTCCCACATAG
Protein sequence

>Msa0548570

MIFSRIGRSLSRSSRVKNLLHGEARLGTLYGVSRTNVFIDDVENGLGFLRGYVSSAIARNNGFASNLYDFKSIAANPRLHRMFSSESPKKKNYEKFYPKEKKEVPKGEEKKSESKDESKSNTEDGGSFHEAFIKQFQNYLTPLLVVGLFLSSLSLGPRDQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKIYVRNSPLNQADSEVQGTLPAKGSGGQFKYVINIGSVESFEEKLEEAQEALGVDSHNFVPVMYSSEMVWYQELMRFAPTLLILGTLWFMGRKVQGGFGVGGGSTGKNGRGIFNIGKAHVTKVDKNTKNKVYFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFLEARQCAPSIVFIDEIDAIGRKRGRGGFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRADILDNALLRPGRFDRTISIDVPDIKGRDQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARTDESQVTMDHFEAAIDRIIGGLEKKNRVISKLERRTVAYHEAGHAVAGWFLEHCEPLLKVTIVPRGTAALGFAQYVPSENLLRTKEQLLDMTCMTLGGRAAEQVLIGAISTGAQNDLEKVTKMTYAQIAIYGFSEKVGLLSFPQNDDAFGKPYSGDTGNIIDQEVRDWVKHAYERTIQLIEEHKEKIAQIAELLLEKEVLHQDDLVRILGERPFKSAEPTNYDRFKLGFQDEEKAAETIVDEAKEGGGSSPLEPEVVPT*