AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1459990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1459990 MtrunA17_Chr4g0031821 96.744 645 20 1 1 644 163 807 0.0 1287
Msa1459990 MtrunA17_Chr7g0260601 76.266 632 110 5 1 603 68 688 0.0 956
Msa1459990 MtrunA17_Chr6g0476861 73.028 634 133 7 1 631 76 674 0.0 910
Msa1459990 MtrunA17_Chr7g0248361 74.713 609 124 6 1 603 58 642 0.0 905
Msa1459990 MtrunA17_Chr3g0094871 76.169 449 89 4 152 597 6 439 0.0 690
Msa1459990 MtrunA17_Chr1g0168321 66.041 533 94 4 1 533 58 503 0.0 680
Msa1459990 MtrunA17_Chr3g0143721 48.673 452 214 6 157 594 249 696 7.62e-143 432
Msa1459990 MtrunA17_Chr2g0297281 47.505 461 225 9 157 607 286 739 1.29e-133 409
Msa1459990 MtrunA17_Chr4g0052411 48.230 452 216 9 157 596 229 674 1.10e-132 405
Msa1459990 MtrunA17_Chr7g0217421 52.747 364 164 6 148 508 30 388 2.17e-124 374
Msa1459990 MtrunA17_Chr3g0135721 42.516 461 243 9 148 598 215 663 9.45e-114 357
Msa1459990 MtrunA17_Chr5g0429571 44.880 459 231 10 130 568 284 740 1.77e-113 358
Msa1459990 MtrunA17_Chr3g0135761 42.333 463 243 9 149 604 218 663 3.82e-111 350
Msa1459990 MtrunA17_Chr1g0158881 40.313 511 279 9 92 594 262 754 4.20e-111 352
Msa1459990 MtrunA17_Chr8g0362771 39.490 471 266 7 141 604 221 679 9.12e-109 344
Msa1459990 MtrunA17_Chr3g0104211 44.651 430 218 6 157 568 304 731 1.25e-107 343
Msa1459990 MtrunA17_Chr5g0432631 41.026 468 257 8 125 585 197 652 4.48e-104 335
Msa1459990 MtrunA17_Chr5g0432641 39.238 446 250 9 148 585 182 614 3.88e-92 298
Msa1459990 MtrunA17_Chr8g0388371 34.861 502 274 11 139 598 389 879 3.70e-81 275
Msa1459990 MtrunA17_Chr2g0331161 39.732 448 242 11 157 594 415 844 1.06e-79 270
Msa1459990 MtrunA17_Chr6g0456351 50.000 272 132 1 148 419 308 575 1.58e-79 264
Msa1459990 MtrunA17_Chr3g0129971 34.227 485 282 11 140 605 279 745 1.02e-70 245
Msa1459990 MtrunA17_Chr4g0050561 40.078 257 151 2 162 417 161 415 5.03e-56 196
Msa1459990 MtrunA17_Chr8g0345461 40.377 265 154 3 146 409 154 415 1.16e-55 195
Msa1459990 MtrunA17_Chr1g0182711 43.725 247 135 3 159 404 190 433 1.35e-55 195
Msa1459990 MtrunA17_Chr7g0262801 43.725 247 135 3 159 404 189 432 4.50e-55 194
Msa1459990 MtrunA17_Chr3g0135781 51.099 182 79 2 141 319 39 213 3.20e-54 184
Msa1459990 MtrunA17_Chr1g0200081 40.000 265 154 4 146 409 164 424 2.11e-53 189
Msa1459990 MtrunA17_Chr8g0392981 73.950 119 29 1 479 595 1 119 2.92e-52 176
Msa1459990 MtrunA17_Chr8g0392971 82.353 102 18 0 369 470 51 152 2.96e-52 177
Msa1459990 MtrunA17_Chr4g0014731 40.329 243 141 3 159 400 170 409 7.32e-52 184
Msa1459990 MtrunA17_Chr1g0192151 40.329 243 141 3 159 400 169 408 7.53e-52 184
Msa1459990 MtrunA17_Chr8g0357301 29.006 493 278 15 174 615 487 958 4.64e-51 190
Msa1459990 MtrunA17_Chr5g0432391 30.493 446 230 12 149 585 48 422 8.73e-50 179
Msa1459990 MtrunA17_Chr7g0255721 41.434 251 140 4 156 403 684 930 1.09e-49 186
Msa1459990 MtrunA17_Chr7g0255721 40.092 217 123 3 188 403 416 626 2.06e-31 130
Msa1459990 MtrunA17_Chr7g0255641 39.764 254 140 5 156 403 657 903 8.88e-49 184
Msa1459990 MtrunA17_Chr7g0255641 40.513 195 107 5 195 388 432 618 1.51e-29 125
Msa1459990 MtrunA17_Chr2g0327121 42.975 242 129 4 146 385 196 430 2.32e-48 181
Msa1459990 MtrunA17_Chr2g0327121 42.735 234 122 5 157 385 480 706 5.70e-47 177
Msa1459990 MtrunA17_Chr3g0108321 43.564 202 112 2 144 344 146 346 3.30e-48 173
Msa1459990 MtrunA17_Chr7g0255651 41.558 231 131 3 156 385 281 508 1.75e-47 176
Msa1459990 MtrunA17_Chr7g0255651 30.317 221 135 5 176 385 29 241 4.30e-19 91.3
Msa1459990 MtrunA17_Chr1g0180791 42.424 231 127 4 157 385 478 704 2.02e-47 179
Msa1459990 MtrunA17_Chr1g0180791 42.149 242 131 4 146 385 194 428 8.34e-47 177
Msa1459990 MtrunA17_Chr7g0264521 42.358 229 126 4 159 385 481 705 3.82e-47 178
Msa1459990 MtrunA17_Chr7g0264521 41.494 241 134 4 146 385 195 429 1.85e-46 176
Msa1459990 MtrunA17_Chr3g0145011 39.113 248 147 3 157 403 139 383 4.24e-47 171
Msa1459990 MtrunA17_Chr3g0141901 39.113 248 147 3 157 403 136 380 7.04e-47 170
Msa1459990 MtrunA17_Chr2g0277831 41.880 234 120 4 159 385 245 469 2.93e-41 160
Msa1459990 MtrunA17_Chr2g0277831 39.474 228 133 3 157 383 533 756 5.19e-41 160
Msa1459990 MtrunA17_Chr7g0255691 38.462 247 146 4 156 399 285 528 4.84e-40 154
Msa1459990 MtrunA17_Chr7g0255691 35.000 260 133 9 162 399 22 267 5.65e-27 115
Msa1459990 MtrunA17_Chr7g0255901 36.797 231 141 4 157 385 639 866 2.26e-39 155
Msa1459990 MtrunA17_Chr2g0321241 41.410 227 119 8 154 376 129 345 4.20e-37 144
Msa1459990 MtrunA17_Chr4g0026631 41.410 227 119 8 154 376 124 340 1.02e-36 142
Msa1459990 MtrunA17_Chr8g0387641 36.207 232 138 5 157 385 521 745 2.74e-36 145
Msa1459990 MtrunA17_Chr4g0033451 32.857 350 204 9 73 403 292 629 7.11e-36 145
Msa1459990 MtrunA17_Chr4g0043381 35.398 226 139 4 159 383 839 1058 1.90e-35 143
Msa1459990 MtrunA17_Chr1g0190401 24.070 511 320 9 145 593 668 1172 3.06e-35 143
Msa1459990 MtrunA17_Chr3g0086411 35.357 280 151 7 157 410 215 490 7.15e-35 138
Msa1459990 MtrunA17_Chr3g0086411 36.667 150 78 3 244 383 7 149 3.26e-18 88.2
Msa1459990 MtrunA17_Chr3g0135791 31.557 244 161 4 364 604 19 259 2.62e-34 132
Msa1459990 MtrunA17_Chr6g0462581 36.638 232 136 6 157 385 500 723 3.05e-34 139
Msa1459990 MtrunA17_Chr3g0086401 34.146 287 151 7 157 412 385 664 3.76e-34 138
Msa1459990 MtrunA17_Chr3g0086401 35.841 226 123 5 159 372 94 309 7.27e-32 131
Msa1459990 MtrunA17_Chr4g0004121 33.535 331 184 11 127 430 208 529 8.78e-34 135
Msa1459990 MtrunA17_Chr2g0327231 43.195 169 92 3 151 317 340 506 9.04e-34 135
Msa1459990 MtrunA17_Chr2g0327231 37.000 100 60 1 146 245 142 238 2.37e-12 69.7
Msa1459990 MtrunA17_Chr4g0038101 35.931 231 131 7 157 380 721 941 2.30e-33 137
Msa1459990 MtrunA17_Chr5g0397121 35.345 232 140 5 157 385 513 737 2.38e-33 136
Msa1459990 MtrunA17_Chr1g0204031 36.752 234 136 7 156 385 556 781 2.08e-32 134
Msa1459990 MtrunA17_Chr2g0316851 32.946 258 160 5 136 385 571 823 3.68e-32 134
Msa1459990 MtrunA17_Chr1g0202371 36.957 230 128 8 157 380 397 615 7.24e-32 131
Msa1459990 MtrunA17_Chr4g0052271 37.975 237 138 7 157 391 119 348 7.71e-32 128
Msa1459990 MtrunA17_Chr1g0195731 36.052 233 138 6 157 385 934 1159 1.53e-31 131
Msa1459990 MtrunA17_Chr1g0202381 35.371 229 136 6 156 380 467 687 4.43e-31 129
Msa1459990 MtrunA17_Chr3g0127401 36.402 239 128 9 157 385 81 305 4.55e-31 125
Msa1459990 MtrunA17_Chr3g0127431 34.728 239 132 9 157 385 84 308 6.74e-31 125
Msa1459990 MtrunA17_Chr1g0195741 35.622 233 139 6 157 385 938 1163 7.17e-31 129
Msa1459990 MtrunA17_Chr4g0047411 36.546 249 128 7 182 404 202 446 1.73e-30 127
Msa1459990 MtrunA17_Chr3g0116131 35.526 228 136 6 157 380 902 1122 4.90e-30 127
Msa1459990 MtrunA17_Chr6g0459561 35.391 243 141 7 145 381 370 602 3.35e-28 120
Msa1459990 MtrunA17_Chr7g0246111 33.333 243 129 8 157 385 212 435 6.40e-28 118
Msa1459990 MtrunA17_Chr6g0459541 30.389 283 161 8 129 381 11 287 1.24e-25 108
Msa1459990 MtrunA17_Chr2g0289231 32.510 243 131 8 153 379 293 518 1.95e-23 105
Msa1459990 MtrunA17_Chr6g0459551 33.906 233 134 10 129 352 71 292 7.00e-21 95.9
Msa1459990 MtrunA17_Chr3g0135741 36.508 126 78 2 360 484 13 137 2.02e-17 79.7
Msa1459990 MtrunA17_Chr5g0432671 39.048 105 59 2 360 464 3 102 2.22e-15 72.4
Msa1459990 MtrunA17_Chr6g0459531 27.099 262 145 10 129 381 36 260 7.10e-14 73.2
Msa1459990 MtrunA17_Chr4g0062081 42.857 77 42 2 161 235 11 87 2.29e-13 66.6
Msa1459990 MtrunA17_Chr5g0404651 31.841 201 118 8 152 344 209 398 1.78e-11 67.0
Msa1459990 MtrunA17_Chr3g0134831 31.016 187 91 7 166 328 50 222 3.58e-11 64.7
Msa1459990 MtrunA17_Chr2g0316041 29.730 185 115 6 167 344 150 326 3.63e-11 65.9
Msa1459990 MtrunA17_Chr2g0315991 29.167 192 121 6 159 344 199 381 5.36e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1459990 AT1G07510.1 80.492 651 120 4 1 644 163 813 0.0 1054
Msa1459990 AT2G29080.1 81.288 652 113 5 1 644 159 809 0.0 1031
Msa1459990 AT1G50250.1 48.894 452 213 7 157 594 259 706 3.01e-142 431
Msa1459990 AT5G42270.1 48.009 452 217 6 157 594 247 694 1.36e-138 421
Msa1459990 AT1G06430.1 48.156 461 220 10 157 606 217 669 3.73e-134 409
Msa1459990 AT1G06430.3 48.156 461 220 10 157 606 217 669 3.73e-134 409
Msa1459990 AT1G06430.2 48.156 461 220 10 157 606 217 669 3.73e-134 409
Msa1459990 AT2G30950.1 47.722 461 222 10 157 606 224 676 4.33e-133 407
Msa1459990 AT2G30950.2 47.722 461 222 10 157 606 224 676 4.33e-133 407
Msa1459990 AT2G30950.3 47.722 461 222 10 157 606 224 676 4.33e-133 407
Msa1459990 AT2G30950.4 47.722 461 222 10 157 606 228 680 4.95e-133 407
Msa1459990 AT5G15250.1 47.095 482 233 12 139 608 204 675 1.54e-132 405
Msa1459990 AT2G26140.1 43.006 479 254 9 114 585 180 646 2.03e-115 362
Msa1459990 AT5G53170.1 41.535 508 277 9 92 594 292 784 4.65e-115 363
Msa1459990 AT5G58870.1 46.512 430 213 6 157 570 326 754 3.40e-114 361
Msa1459990 AT3G47060.1 48.515 404 194 6 157 547 322 724 2.12e-112 356
Msa1459990 AT5G15250.2 51.266 316 126 5 139 431 204 514 1.60e-99 314
Msa1459990 AT3G02450.1 51.724 261 121 2 151 410 324 580 9.81e-80 265
Msa1459990 AT4G23940.1 33.210 539 310 11 101 598 373 902 1.23e-77 266
Msa1459990 AT3G16290.1 37.783 442 251 9 157 590 407 832 1.11e-74 257
Msa1459990 AT5G64580.1 34.917 484 279 11 140 604 296 762 6.10e-71 246
Msa1459990 AT5G19990.2 40.467 257 150 2 162 417 105 359 6.22e-56 194
Msa1459990 AT5G19990.1 40.467 257 150 2 162 417 163 417 1.40e-55 195
Msa1459990 AT5G19990.3 40.467 257 150 2 162 417 163 417 1.40e-55 195
Msa1459990 AT5G20000.1 40.467 257 150 2 162 417 163 417 1.62e-55 194
Msa1459990 AT1G53750.1 40.377 265 154 3 146 409 154 415 1.74e-55 195
Msa1459990 AT4G29040.1 43.725 247 135 3 159 404 187 430 1.95e-55 195
Msa1459990 AT2G20140.1 43.725 247 135 3 159 404 187 430 1.03e-54 193
Msa1459990 AT1G53780.3 39.623 265 156 3 146 409 325 586 8.75e-54 194
Msa1459990 AT1G53780.2 39.623 265 156 3 146 409 347 608 8.90e-54 194
Msa1459990 AT1G53780.1 39.623 265 156 3 146 409 326 587 9.08e-54 194
Msa1459990 AT1G53780.4 39.623 265 156 3 146 409 326 587 9.08e-54 194
Msa1459990 AT1G09100.1 40.741 243 140 3 159 400 169 408 6.35e-53 187
Msa1459990 AT3G05530.1 41.152 243 139 3 159 400 170 409 7.42e-53 187
Msa1459990 AT5G58290.1 39.216 255 151 3 144 397 139 390 9.59e-53 187
Msa1459990 AT1G79560.2 27.536 552 346 14 106 615 439 978 1.86e-51 192
Msa1459990 AT1G79560.1 27.728 559 346 15 106 618 439 985 2.13e-51 192
Msa1459990 AT3G56690.1 40.637 251 142 4 156 403 720 966 1.11e-50 190
Msa1459990 AT3G56690.1 41.206 199 110 3 188 385 413 605 5.35e-35 142
Msa1459990 AT1G79560.3 28.261 506 316 13 106 576 439 932 4.18e-50 188
Msa1459990 AT5G03340.1 41.991 231 128 4 157 385 477 703 1.41e-47 179
Msa1459990 AT5G03340.1 41.085 258 141 5 146 401 193 441 1.88e-46 176
Msa1459990 AT3G53230.1 42.424 231 127 4 157 385 478 704 1.51e-47 179
Msa1459990 AT3G53230.1 40.316 253 144 4 146 397 194 440 5.41e-46 175
Msa1459990 AT5G43010.1 38.710 248 148 3 157 403 136 380 4.66e-47 171
Msa1459990 AT1G45000.1 38.710 248 148 3 157 403 136 380 6.37e-47 171
Msa1459990 AT3G09840.1 41.085 258 141 5 146 401 193 441 2.75e-46 176
Msa1459990 AT3G09840.1 41.304 230 132 2 157 385 477 704 3.23e-46 176
Msa1459990 AT3G01610.2 41.810 232 112 6 159 376 232 454 2.99e-40 158
Msa1459990 AT3G01610.2 34.828 290 165 7 140 412 508 790 8.81e-35 141
Msa1459990 AT3G01610.1 41.810 232 112 6 159 376 232 454 3.61e-40 157
Msa1459990 AT3G01610.1 34.828 290 165 7 140 412 508 790 9.26e-35 141
Msa1459990 AT2G03670.1 36.032 247 153 3 156 399 282 526 1.28e-38 151
Msa1459990 AT2G03670.1 30.719 306 186 8 161 449 23 319 2.21e-31 130
Msa1459990 AT1G03000.1 37.069 232 139 5 157 385 655 882 5.12e-38 151
Msa1459990 AT1G05910.1 36.364 264 155 5 157 413 378 635 2.72e-37 149
Msa1459990 AT1G64110.2 34.843 287 172 7 157 435 518 797 5.03e-37 148
Msa1459990 AT1G64110.4 34.843 287 172 7 157 435 518 797 5.03e-37 148
Msa1459990 AT1G64110.5 34.843 287 172 7 157 435 516 795 5.58e-37 148
Msa1459990 AT1G64110.3 34.843 287 172 7 157 435 516 795 5.58e-37 148
Msa1459990 AT1G64110.1 34.843 287 172 7 157 435 513 792 5.85e-37 148
Msa1459990 AT5G08470.1 36.481 233 127 6 159 383 843 1062 1.90e-35 144
Msa1459990 AT5G08470.3 36.481 233 127 6 159 383 834 1053 2.03e-35 144
Msa1459990 AT4G28000.2 35.776 232 138 5 157 385 517 740 3.79e-35 142
Msa1459990 AT4G28000.1 35.776 232 138 5 157 385 515 738 3.88e-35 142
Msa1459990 AT4G28000.3 35.776 232 138 5 157 385 517 740 4.37e-35 142
Msa1459990 AT3G04340.1 40.415 193 112 3 151 341 774 965 7.83e-35 142
Msa1459990 AT2G27600.1 39.474 228 122 9 154 376 126 342 4.37e-34 135
Msa1459990 AT5G52882.1 35.776 232 138 5 157 385 514 737 1.02e-33 138
Msa1459990 AT3G15120.2 36.910 233 132 5 159 383 728 953 2.13e-33 138
Msa1459990 AT3G15120.1 36.910 233 132 5 159 383 718 943 2.17e-33 138
Msa1459990 AT4G02480.1 31.126 302 171 7 157 428 960 1254 2.95e-33 137
Msa1459990 AT1G80350.1 36.653 251 140 7 157 397 236 477 2.37e-32 132
Msa1459990 AT2G03670.2 30.719 306 186 8 161 449 23 319 5.07e-32 129
Msa1459990 AT2G03670.2 39.286 140 84 1 156 294 282 421 1.29e-19 92.4
Msa1459990 AT5G53540.1 36.864 236 131 8 157 385 84 308 7.05e-32 128
Msa1459990 AT1G50140.2 35.931 231 131 7 157 380 689 909 7.17e-31 129
Msa1459990 AT1G50140.5 35.931 231 131 7 157 380 689 909 7.17e-31 129
Msa1459990 AT1G50140.3 35.931 231 131 7 157 380 711 931 8.22e-31 129
Msa1459990 AT1G50140.1 35.931 231 131 7 157 380 711 931 8.22e-31 129
Msa1459990 AT1G50140.4 35.931 231 131 7 157 380 711 931 8.22e-31 129
Msa1459990 AT1G02890.1 29.801 302 175 7 157 428 941 1235 1.16e-30 129
Msa1459990 AT2G45500.4 34.000 250 140 9 145 385 70 303 1.31e-30 124
Msa1459990 AT2G45500.3 34.000 250 140 9 145 385 70 303 1.31e-30 124
Msa1459990 AT3G19740.1 35.965 228 135 7 157 380 701 921 3.40e-30 127
Msa1459990 AT2G45500.2 34.000 250 140 9 145 385 203 436 5.33e-30 124
Msa1459990 AT2G45500.1 34.000 250 140 9 145 385 207 440 6.23e-30 124
Msa1459990 AT4G27680.1 36.017 236 133 8 157 385 81 305 6.45e-30 122
Msa1459990 AT2G45500.5 34.000 250 140 9 145 385 213 446 7.28e-30 124
Msa1459990 AT2G34560.1 37.662 231 136 7 157 385 100 324 2.87e-29 120
Msa1459990 AT2G34560.2 37.662 231 136 7 157 385 109 333 3.09e-29 120
Msa1459990 AT4G04910.1 37.288 236 122 8 182 401 239 464 4.54e-29 123
Msa1459990 AT3G27120.1 34.979 243 142 7 145 381 388 620 1.54e-27 118
Msa1459990 AT4G24860.1 34.211 228 139 6 157 380 817 1037 2.43e-27 119
Msa1459990 AT4G24860.4 34.211 228 139 6 157 380 790 1010 2.45e-27 119
Msa1459990 AT4G24860.3 34.211 228 139 6 157 380 815 1035 2.49e-27 119
Msa1459990 AT4G24860.2 34.211 228 139 6 157 380 813 1033 3.04e-27 118
Msa1459990 AT4G04180.1 31.513 238 142 7 152 379 311 537 2.06e-25 111
Msa1459990 AT4G04180.2 31.513 238 142 7 152 379 306 532 2.22e-25 111
Msa1459990 AT1G62130.1 32.035 231 128 7 157 380 750 958 8.24e-24 107
Msa1459990 AT1G62130.2 32.035 231 128 7 157 380 743 951 8.96e-24 107
Msa1459990 AT1G45000.2 40.288 139 81 2 157 294 136 273 6.74e-23 100
Msa1459990 AT5G08470.2 35.526 152 87 4 159 306 843 987 1.31e-19 94.4
Msa1459990 AT1G02890.2 26.490 302 157 8 157 428 941 1207 1.56e-19 94.0
Msa1459990 AT5G17760.1 29.851 201 111 7 159 344 218 403 1.21e-11 68.2

Find 180 sgRNAs with CRISPR-Local

Find 253 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCGCCAACCCTGTTGATTT+TGG 0.144951 tig0040569:-16333 Msa1459990:CDS
TTTGGGAACTCTCTGGTTTA+TGG 0.154517 tig0040569:-16315 Msa1459990:CDS
GTGCCATTTCTTTCCATATC+TGG 0.205745 tig0040569:-15807 Msa1459990:CDS
CAGGGTGAGAAACTTGTTTC+TGG 0.216719 tig0040569:-15745 Msa1459990:CDS
TTTAAATATGTAATCAATAT+TGG 0.218480 tig0040569:-16479 Msa1459990:CDS
TGAAACCATAGATGGCTATT+TGG 0.222849 tig0040569:+14194 Msa1459990:intergenic
CCAAGCTCTTCGTATTTCTT+AGG 0.226217 tig0040569:+15918 Msa1459990:intergenic
TATTGATTACATATTTAAAT+TGG 0.233644 tig0040569:+16483 Msa1459990:intergenic
CATATCTGGTTCTGATTTCA+TGG 0.234533 tig0040569:-15793 Msa1459990:CDS
CTTCGCTGTCTGCTTGATTA+AGG 0.241757 tig0040569:+16540 Msa1459990:intergenic
CTCATCAATAAATACTATAC+TGG 0.248136 tig0040569:+15704 Msa1459990:intergenic
TGCTGTTGCAGGTTGGTTCT+TGG 0.252343 tig0040569:-14708 Msa1459990:CDS
CAGGACAAAGGAGCAGCTTT+TGG 0.256747 tig0040569:-14594 Msa1459990:CDS
TTCTCTGCAGATTAGTTTCC+AGG 0.261767 tig0040569:-16654 None:intergenic
AGAGTTCCTCACATATATTT+TGG 0.268782 tig0040569:+16565 Msa1459990:intergenic
CTCAAAATGACGACGCGTTT+GGG 0.272158 tig0040569:-14144 Msa1459990:CDS
CCTCAAAATGACGACGCGTT+TGG 0.275529 tig0040569:-14145 Msa1459990:CDS
TCAAATAAATCTGAAATATC+TGG 0.292729 tig0040569:+15451 Msa1459990:intergenic
AGATGACTTGGTTCGAATCT+TGG 0.302830 tig0040569:-13966 Msa1459990:CDS
ATTGATGTACCTGACATTAA+AGG 0.319955 tig0040569:-15480 Msa1459990:CDS
CGAGGCAAAGCAAGAAATTA+TGG 0.326964 tig0040569:-15964 Msa1459990:CDS
CATGAAATCAGAACCAGATA+TGG 0.334227 tig0040569:+15794 Msa1459990:intergenic
TTGGGAACTCTCTGGTTTAT+GGG 0.337589 tig0040569:-16314 Msa1459990:CDS
AAATCAATTGTTGGTGGAAA+TGG 0.339562 tig0040569:-15610 Msa1459990:CDS
AATTCCAAAAGGTGCTCTTC+TGG 0.340894 tig0040569:-15889 Msa1459990:CDS
TGGTGGTCGGGCTGCCGAGC+AGG 0.341124 tig0040569:-14552 Msa1459990:intron
GCCCTTACTCCAGGATTTGC+TGG 0.341796 tig0040569:-15378 Msa1459990:CDS
CCTTTGCAGGAAGGGTTCCT+TGG 0.342572 tig0040569:+16516 Msa1459990:intergenic
TGTGGGTTCTGCACTCTTGA+AGG 0.349056 tig0040569:+13934 Msa1459990:intergenic
CGATAGGATCATTGGTGGTT+TGG 0.356353 tig0040569:-15262 Msa1459990:CDS
GAAACCATAGATGGCTATTT+GGG 0.358295 tig0040569:+14195 Msa1459990:intergenic
GATGACTTGGTTCGAATCTT+GGG 0.367294 tig0040569:-13965 Msa1459990:CDS
TTGATCAGGAAGTGCGAGAT+TGG 0.371100 tig0040569:-14090 Msa1459990:CDS
CAACAGCATGGCCTGCTTCA+TGG 0.372235 tig0040569:+14723 Msa1459990:intergenic
TGGCCACCAGATCCCTTTGC+AGG 0.378325 tig0040569:+16503 Msa1459990:intergenic
CCTCGCGGCACAGCAGCACT+TGG 0.379585 tig0040569:-14650 Msa1459990:CDS
GAAATAGACTTTGATTAGCT+TGG 0.380375 tig0040569:+13655 Msa1459990:intergenic
TGTTATATATTCTTCTGAAA+TGG 0.383217 tig0040569:-16381 Msa1459990:CDS
GGTTCTCACTAGGAACATAT+TGG 0.390805 tig0040569:+14621 Msa1459990:intergenic
TATATTCTTCTGAAATGGTT+TGG 0.391866 tig0040569:-16376 Msa1459990:CDS
TTCGCTGTCTGCTTGATTAA+GGG 0.399007 tig0040569:+16541 Msa1459990:intergenic
AAAGCAACTGCAGGGGAGTC+TGG 0.399715 tig0040569:-15831 Msa1459990:CDS
ACCCTTCCTGCAAAGGGATC+TGG 0.404556 tig0040569:-16509 Msa1459990:CDS
TATGCCCAAATAGCCATCTA+TGG 0.410083 tig0040569:-14199 Msa1459990:CDS
TTGATGCAATTGGTCGGAAA+AGG 0.411767 tig0040569:-15680 Msa1459990:CDS
CCCACCAGAAGAGCACCTTT+TGG 0.413587 tig0040569:+15885 Msa1459990:intergenic
AGGGGTCGTGGAGGTTTCTC+TGG 0.415439 tig0040569:-15660 Msa1459990:CDS
AGAGAGTTCCCAAAATCAAC+AGG 0.415902 tig0040569:+16324 Msa1459990:intergenic
GTGTTCTTCTATAAGCTGTA+TGG 0.421606 tig0040569:+14045 Msa1459990:intergenic
AAACCATACAGCGGCGATAC+TGG 0.423477 tig0040569:-14121 Msa1459990:CDS
AACTATGTGGGAACAACCTC+AGG 0.425530 tig0040569:+13812 Msa1459990:intergenic
TTGTATGACCCTTGGTGGTC+GGG 0.425818 tig0040569:-14564 Msa1459990:CDS
TTCTGAAATGGTTTGGTACC+AGG 0.426278 tig0040569:-16369 Msa1459990:CDS
GAAGCAGGCCATGCTGTTGC+AGG 0.430567 tig0040569:-14719 Msa1459990:CDS
CTTAAATCTATCGTAATTTG+TGG 0.441735 tig0040569:+13916 Msa1459990:intergenic
ATGTCTGCTCCAGCAAATCC+TGG 0.444210 tig0040569:+15369 Msa1459990:intergenic
GTGGTTTGGAGAAGAAGAAC+AGG 0.451185 tig0040569:-15248 Msa1459990:CDS
GAACCAGATATGGAAAGAAA+TGG 0.451853 tig0040569:+15804 Msa1459990:intergenic
TTTGTTGGTGGTGGCTCCAC+TGG 0.453849 tig0040569:-16272 Msa1459990:CDS
CTCCAGCAAATCCTGGAGTA+AGG 0.456693 tig0040569:+15376 Msa1459990:intergenic
ATTTGTTGGAGACAACAATA+TGG 0.457579 tig0040569:+16594 Msa1459990:intergenic
AAGTACTTTAAATCAATTGT+TGG 0.458092 tig0040569:-15619 Msa1459990:CDS
ATTTCAGAAGAATATATAAC+AGG 0.458585 tig0040569:+16383 Msa1459990:intergenic
TTAAATCTATCGTAATTTGT+GGG 0.460225 tig0040569:+13917 Msa1459990:intergenic
TTACCAGTATCGCCGCTGTA+TGG 0.460948 tig0040569:+14118 Msa1459990:intergenic
GTTCTCACTAGGAACATATT+GGG 0.461038 tig0040569:+14622 Msa1459990:intergenic
ATTGATGAGATTGATGCAAT+TGG 0.464604 tig0040569:-15690 Msa1459990:CDS
TACTGGTAACATCATTGATC+AGG 0.465960 tig0040569:-14104 Msa1459990:CDS
ATGGAAATGTTTGTCGGTGT+TGG 0.466679 tig0040569:-15774 Msa1459990:CDS
CACTGGAGCACAAAATGACT+TGG 0.469816 tig0040569:-14242 Msa1459990:CDS
ACCAGATCCCTTTGCAGGAA+GGG 0.475185 tig0040569:+16508 Msa1459990:intergenic
GTGGGTTCTGCACTCTTGAA+GGG 0.475380 tig0040569:+13935 Msa1459990:intergenic
GATTTCATGGAAATGTTTGT+CGG 0.475383 tig0040569:-15780 Msa1459990:CDS
CTCATTGGAGCAATCTCCAC+TGG 0.475680 tig0040569:-14259 Msa1459990:CDS
TGATGCAATTGGTCGGAAAA+GGG 0.476507 tig0040569:-15679 Msa1459990:CDS
ATTACGATAGATTTAAGCTA+GGG 0.479014 tig0040569:-13910 Msa1459990:CDS
TTGGTGGAAATGGATGGTTT+TGG 0.480220 tig0040569:-15600 Msa1459990:CDS
TTGTCGGTGTTGGACCATCC+AGG 0.481495 tig0040569:-15764 Msa1459990:CDS
TATTTGGGCATATGTCATCT+TGG 0.483350 tig0040569:+14210 Msa1459990:intergenic
TGAAGACCCACCACCCTCCT+TGG 0.483888 tig0040569:+13844 Msa1459990:intergenic
CTCGCGGCACAGCAGCACTT+GGG 0.487871 tig0040569:-14649 Msa1459990:CDS
GCTGGAGTTGTTGTGCTAGC+AGG 0.490258 tig0040569:-15570 Msa1459990:CDS
CTCCTTGGCTTCATCGACGA+TGG 0.491547 tig0040569:+13859 Msa1459990:intergenic
GATGAAGCCAAGGAGGGTGG+TGG 0.491766 tig0040569:-13851 Msa1459990:CDS
TGCCTAGGTAATAAGTAAGC+TGG 0.491812 tig0040569:-14765 Msa1459990:intron
AGCCTTCATATTATTCTCAA+AGG 0.492433 tig0040569:-15407 Msa1459990:CDS
TTCCTAGTGAGAACCTTCTC+AGG 0.496104 tig0040569:-14613 Msa1459990:CDS
GCAGCTATCGATAGGATCAT+TGG 0.496191 tig0040569:-15270 Msa1459990:CDS
GCTGATATGGACAACTTGTA+CGG 0.500045 tig0040569:-13734 Msa1459990:three_prime_UTR
GACAACGCCTTACTTAGGCC+TGG 0.501131 tig0040569:-15525 Msa1459990:CDS
TACTTTAAATCAATTGTTGG+TGG 0.503402 tig0040569:-15616 Msa1459990:CDS
GATATGACTTGTATGACCCT+TGG 0.505273 tig0040569:-14572 Msa1459990:CDS
AAAGTGCAAGGTGGATTTGT+TGG 0.505308 tig0040569:-16287 Msa1459990:CDS
AGATTCGAACCAAGTCATCT+TGG 0.507271 tig0040569:+13969 Msa1459990:intergenic
CAAGGTGGATTTGTTGGTGG+TGG 0.507968 tig0040569:-16281 Msa1459990:CDS
CAAGGAACCCTTCCTGCAAA+GGG 0.510654 tig0040569:-16515 Msa1459990:CDS
TGATCAGGAAGTGCGAGATT+GGG 0.511795 tig0040569:-14089 Msa1459990:CDS
ACAATATGGTCTACTAATCC+TGG 0.514715 tig0040569:+16608 Msa1459990:intergenic
TCCAAAAGGTGCTCTTCTGG+TGG 0.519532 tig0040569:-15886 Msa1459990:CDS
CTTGTATGACCCTTGGTGGT+CGG 0.520582 tig0040569:-14565 Msa1459990:CDS
CCAAGGAACCCTTCCTGCAA+AGG 0.522628 tig0040569:-16516 Msa1459990:CDS
AGGCTTGCAGCCCTTACTCC+AGG 0.523091 tig0040569:-15387 Msa1459990:CDS
AAAACGCCCAGGCCTAAGTA+AGG 0.525242 tig0040569:+15518 Msa1459990:intergenic
CAAACATAAACTTAACTATG+TGG 0.526794 tig0040569:+13799 Msa1459990:intergenic
TCGCTGTCTGCTTGATTAAG+GGG 0.530649 tig0040569:+16542 Msa1459990:intergenic
ACCGTTGCTTACCATGAAGC+AGG 0.531277 tig0040569:-14734 Msa1459990:CDS
AATTACGATAGATTTAAGCT+AGG 0.533611 tig0040569:-13911 Msa1459990:CDS
ATTGGTCGGAAAAGGGGTCG+TGG 0.536073 tig0040569:-15672 Msa1459990:CDS
CACCAGATCCCTTTGCAGGA+AGG 0.536420 tig0040569:+16507 Msa1459990:intergenic
CTCGGCAGCCCGACCACCAA+GGG 0.536999 tig0040569:+14556 Msa1459990:intergenic
GGTCGTGGAATATTTAACAT+TGG 0.540391 tig0040569:-16242 Msa1459990:CDS
CCTAAGAAATACGAAGAGCT+TGG 0.541178 tig0040569:-15918 Msa1459990:CDS
CGTATTTCTTAGGATTCTTG+AGG 0.544887 tig0040569:+15928 Msa1459990:intergenic
TGGTCACGACCTTTAATGTC+AGG 0.547707 tig0040569:+15471 Msa1459990:intergenic
AGCCTTTGAGAATAATATGA+AGG 0.549153 tig0040569:+15405 Msa1459990:intergenic
CTTGGTGCCAAAATTCCAAA+AGG 0.552017 tig0040569:-15900 Msa1459990:CDS
TATTAGACAACGCCTTACTT+AGG 0.552358 tig0040569:-15530 Msa1459990:CDS
AAACATAAACTTAACTATGT+GGG 0.552385 tig0040569:+13800 Msa1459990:intergenic
GCGCAAATCTCATTAACTCC+TGG 0.554538 tig0040569:+16351 Msa1459990:intergenic
GTGCAAGGTGGATTTGTTGG+TGG 0.555164 tig0040569:-16284 Msa1459990:CDS
TAAGCTAGGGTTTCAAGATG+AGG 0.556661 tig0040569:-13897 Msa1459990:CDS
CAGGCCATGCTGTTGCAGGT+TGG 0.560076 tig0040569:-14715 Msa1459990:CDS
GCTGCTCCTTTGTCCTGAGA+AGG 0.560952 tig0040569:+14600 Msa1459990:intergenic
ACAACGCCTTACTTAGGCCT+GGG 0.561103 tig0040569:-15524 Msa1459990:CDS
GAACTCTCTGGTTTATGGGA+AGG 0.561814 tig0040569:-16310 Msa1459990:CDS
AACAAGTTTCTCACCCTGGA+TGG 0.565612 tig0040569:+15750 Msa1459990:intergenic
AGGTAATAAGTAAGCTGGAA+AGG 0.566130 tig0040569:-14760 Msa1459990:CDS
TCCACTGGTAAGAATGGTCG+TGG 0.570992 tig0040569:-16257 Msa1459990:CDS
TCATCAATAAATACTATACT+GGG 0.572453 tig0040569:+15705 Msa1459990:intergenic
AGTACTTCACCAAGATGACT+TGG 0.572458 tig0040569:-13978 Msa1459990:CDS
GAAACTTGTTTCTGGAAGCA+AGG 0.572866 tig0040569:-15737 Msa1459990:CDS
GAGGAAGCGCAAGAAGCACT+AGG 0.572888 tig0040569:-16428 Msa1459990:CDS
GCTCGGCAGCCCGACCACCA+AGG 0.576079 tig0040569:+14555 Msa1459990:intergenic
TCCACGACCATTCTTACCAG+TGG 0.580385 tig0040569:+16256 Msa1459990:intergenic
TCCAGCAAATCCTGGAGTAA+GGG 0.580747 tig0040569:+15377 Msa1459990:intergenic
CCAAAAGGTGCTCTTCTGGT+GGG 0.582841 tig0040569:-15885 Msa1459990:CDS
ATTTCGAGGCAGCTATCGAT+AGG 0.584687 tig0040569:-15278 Msa1459990:CDS
AACCATCGTCGATGAAGCCA+AGG 0.587489 tig0040569:-13861 Msa1459990:CDS
GTTCCCAAAATCAACAGGGT+TGG 0.588353 tig0040569:+16329 Msa1459990:intergenic
ATCGTGCGGTCAAAACGCCC+AGG 0.591416 tig0040569:+15507 Msa1459990:intergenic
CAGAAACAAGTTTCTCACCC+TGG 0.591544 tig0040569:+15746 Msa1459990:intergenic
GTCTTCACCTCTAGAACCTG+AGG 0.592909 tig0040569:-13828 Msa1459990:CDS
ACAATAGTTACTTTCAACAA+TGG 0.594322 tig0040569:+14674 Msa1459990:intergenic
AGTCACAATGGATCATTTCG+AGG 0.595853 tig0040569:-15292 Msa1459990:CDS
GGTGGCTCCACTGGTAAGAA+TGG 0.599960 tig0040569:-16263 Msa1459990:CDS
ATGACTTGTATGACCCTTGG+TGG 0.602845 tig0040569:-14569 Msa1459990:CDS
TGGTTTGGAGAAGAAGAACA+GGG 0.606026 tig0040569:-15247 Msa1459990:intron
GCCTGCTTCATGGTAAGCAA+CGG 0.609319 tig0040569:+14733 Msa1459990:intergenic
CTTCCTGCAAAGGGATCTGG+TGG 0.609552 tig0040569:-16506 Msa1459990:CDS
GATGCAATTGGTCGGAAAAG+GGG 0.610099 tig0040569:-15678 Msa1459990:CDS
AAATGATGAAACAACCTGCT+CGG 0.612044 tig0040569:+14538 Msa1459990:intergenic
TGTCGGTGTTGGACCATCCA+GGG 0.613071 tig0040569:-15763 Msa1459990:CDS
GTCCTGAGAAGGTTCTCACT+AGG 0.616189 tig0040569:+14611 Msa1459990:intergenic
GCTATCGATAGGATCATTGG+TGG 0.616670 tig0040569:-15267 Msa1459990:CDS
ATGAAGCCAAGGAGGGTGGT+GGG 0.619072 tig0040569:-13850 Msa1459990:CDS
CAAGCAGACAGCGAAGTCCA+AGG 0.624939 tig0040569:-16533 Msa1459990:CDS
CAATTGTTGGTGGAAATGGA+TGG 0.625755 tig0040569:-15606 Msa1459990:CDS
CATCGTCGATGAAGCCAAGG+AGG 0.628464 tig0040569:-13858 Msa1459990:CDS
GAGAATAATATGAAGGCTCG+TGG 0.628614 tig0040569:+15412 Msa1459990:intergenic
GTCGATGAAGCCAAGGAGGG+TGG 0.631690 tig0040569:-13854 Msa1459990:CDS
ATGAGATTGATGCAATTGGT+CGG 0.631846 tig0040569:-15686 Msa1459990:CDS
GGAACAACCTCAGGTTCTAG+AGG 0.634295 tig0040569:+13821 Msa1459990:intergenic
AAGCTGCTCTGATTGCTGCA+AGG 0.638573 tig0040569:-15329 Msa1459990:CDS
TGATGAATCACAAGTCACAA+TGG 0.642219 tig0040569:-15304 Msa1459990:CDS
GGTCGGAAAAGGGGTCGTGG+AGG 0.642405 tig0040569:-15669 Msa1459990:CDS
ATCGTCGATGAAGCCAAGGA+GGG 0.650482 tig0040569:-13857 Msa1459990:CDS
TAGCACAACAACTCCAGCAG+TGG 0.652358 tig0040569:+15575 Msa1459990:intergenic
AGAACCAACCTGCAACAGCA+TGG 0.654487 tig0040569:+14711 Msa1459990:intergenic
ATGGGAAGGAAAGTGCAAGG+TGG 0.659337 tig0040569:-16296 Msa1459990:CDS
TGAGAACCTTCTCAGGACAA+AGG 0.663177 tig0040569:-14606 Msa1459990:CDS
CCAAGTGCTGCTGTGCCGCG+AGG 0.668668 tig0040569:+14650 Msa1459990:intergenic
TTTAGCAAAAGCAACTGCAG+GGG 0.671935 tig0040569:-15838 Msa1459990:CDS
GTACATCAATTGATATCGTG+CGG 0.677345 tig0040569:+15493 Msa1459990:intergenic
CAGTTGCCAAAATATATGTG+AGG 0.694454 tig0040569:-16571 Msa1459990:CDS
AAAGTAACTATTGTTCCTCG+CGG 0.694758 tig0040569:-14665 Msa1459990:CDS
ACAGCTTATAGAAGAACACA+AGG 0.695122 tig0040569:-14041 Msa1459990:CDS
TTTATGGGAAGGAAAGTGCA+AGG 0.696455 tig0040569:-16299 Msa1459990:CDS
AGATGTTGCTGGCTGTGACG+AGG 0.714294 tig0040569:-15982 Msa1459990:CDS
GAGAGTTCCCAAAATCAACA+GGG 0.726423 tig0040569:+16325 Msa1459990:intergenic
GCGTTTGGGAAACCATACAG+CGG 0.791210 tig0040569:-14130 Msa1459990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTGATTACATATTTAAAT+TGG + tig0040569:13794-13813 Msa1459990:intergenic 10.0%
!! TTTAAATATGTAATCAATAT+TGG - tig0040569:13795-13814 Msa1459990:exon 10.0%
!!! TTTTAAAAATAAAAACAAAC+AGG + tig0040569:15067-15086 Msa1459990:intergenic 10.0%
!!! TTAAAATATAAAATGTTTTC+TGG - tig0040569:15097-15116 Msa1459990:intron 10.0%
!!! TAAAATATAAAATGTTTTCT+GGG - tig0040569:15098-15117 Msa1459990:intron 10.0%
!! ATTACAAAAAAATAATTCTG+TGG + tig0040569:15300-15319 Msa1459990:intergenic 15.0%
!! TGAAATAATTCATTATATCT+TGG - tig0040569:15817-15836 Msa1459990:CDS 15.0%
!! ATTTCAGAAGAATATATAAC+AGG + tig0040569:13894-13913 Msa1459990:intergenic 20.0%
!!! TGTTATATATTCTTCTGAAA+TGG - tig0040569:13893-13912 Msa1459990:CDS 20.0%
!! TTATTTGAATTCATTTGTTC+AGG - tig0040569:14259-14278 Msa1459990:CDS 20.0%
!! TCATCAATAAATACTATACT+GGG + tig0040569:14572-14591 Msa1459990:intergenic 20.0%
!! AAGTACTTTAAATCAATTGT+TGG - tig0040569:14655-14674 Msa1459990:CDS 20.0%
!!! TCAAATAAATCTGAAATATC+TGG + tig0040569:14826-14845 Msa1459990:intergenic 20.0%
!! ACAATTATCTGAAGATTATT+TGG - tig0040569:15427-15446 Msa1459990:CDS 20.0%
!! TATTATCAGTAGTTGAAAAA+AGG + tig0040569:15465-15484 Msa1459990:intergenic 20.0%
!! ATGTGAAACAAAATAAGTAA+TGG + tig0040569:15844-15863 Msa1459990:intergenic 20.0%
!!! TTAAATCTATCGTAATTTGT+GGG + tig0040569:16360-16379 Msa1459990:intergenic 20.0%
!! AAACATAAACTTAACTATGT+GGG + tig0040569:16477-16496 Msa1459990:intergenic 20.0%
!!! AAAGCTTATTTTTAAACTCC+TGG + tig0040569:13641-13660 None:intergenic 25.0%
!! GGAGTTTAAAAATAAGCTTT+TGG - tig0040569:13641-13660 Msa1459990:three_prime_UTR 25.0%
!!! TATATTCTTCTGAAATGGTT+TGG - tig0040569:13898-13917 Msa1459990:CDS 25.0%
! AGACAAAAATACCAAAAACA+AGG - tig0040569:14076-14095 Msa1459990:CDS 25.0%
! AAAAATACCAAAAACAAGGT+TGG - tig0040569:14080-14099 Msa1459990:CDS 25.0%
! GTGATTTATTCTTCATGAAT+TGG - tig0040569:14102-14121 Msa1459990:CDS 25.0%
!!! GTTTATTTTAAAGATGTTGC+TGG - tig0040569:14281-14300 Msa1459990:intron 25.0%
! CTCATCAATAAATACTATAC+TGG + tig0040569:14573-14592 Msa1459990:intergenic 25.0%
! TACTTTAAATCAATTGTTGG+TGG - tig0040569:14658-14677 Msa1459990:CDS 25.0%
!! AAAAACAAACAGGCTTTTAA+AGG + tig0040569:15057-15076 Msa1459990:intergenic 25.0%
!! TATAAAATGTTTTCTGGGTT+TGG - tig0040569:15103-15122 Msa1459990:intron 25.0%
!! TAATTTAAGACATCATGATG+AGG - tig0040569:15391-15410 Msa1459990:CDS 25.0%
! TATCTGAAGATTATTTGGAT+TGG - tig0040569:15432-15451 Msa1459990:CDS 25.0%
!! ACAATAGTTACTTTCAACAA+TGG + tig0040569:15603-15622 Msa1459990:intergenic 25.0%
! AGCAATGAATAAAAGAAAAG+AGG + tig0040569:15779-15798 Msa1459990:intergenic 25.0%
!!! TGTATATCAGTGTTTTTTTG+TGG + tig0040569:15913-15932 Msa1459990:intergenic 25.0%
! ATCTCATGACTTACAATATT+GGG + tig0040569:15959-15978 Msa1459990:intergenic 25.0%
! CTTAAATCTATCGTAATTTG+TGG + tig0040569:16361-16380 Msa1459990:intergenic 25.0%
! AATTACGATAGATTTAAGCT+AGG - tig0040569:16363-16382 Msa1459990:CDS 25.0%
! ATTACGATAGATTTAAGCTA+GGG - tig0040569:16364-16383 Msa1459990:CDS 25.0%
! CAAACATAAACTTAACTATG+TGG + tig0040569:16478-16497 Msa1459990:intergenic 25.0%
!!! AAAAATAAGCTTTTGGAACC+AGG - tig0040569:13648-13667 Msa1459990:three_prime_UTR 30.0%
! ATTTGTTGGAGACAACAATA+TGG + tig0040569:13683-13702 Msa1459990:intergenic 30.0%
!!! TATTTTGGCAACTGATTTGT+TGG + tig0040569:13697-13716 Msa1459990:intergenic 30.0%
! AGAGTTCCTCACATATATTT+TGG + tig0040569:13712-13731 Msa1459990:intergenic 30.0%
!!! TAAATCACCAACCTTGTTTT+TGG + tig0040569:14090-14109 Msa1459990:intergenic 30.0%
GATTTCATGGAAATGTTTGT+CGG - tig0040569:14494-14513 Msa1459990:intron 30.0%
ATTGATGAGATTGATGCAAT+TGG - tig0040569:14584-14603 Msa1459990:CDS 30.0%
! AAATCAATTGTTGGTGGAAA+TGG - tig0040569:14664-14683 Msa1459990:CDS 30.0%
ATTGATGTACCTGACATTAA+AGG - tig0040569:14794-14813 Msa1459990:intron 30.0%
AGCCTTCATATTATTCTCAA+AGG - tig0040569:14867-14886 Msa1459990:intron 30.0%
! AGCCTTTGAGAATAATATGA+AGG + tig0040569:14872-14891 Msa1459990:intergenic 30.0%
! GTTAAGCTGTTTAAAACAGT+CGG - tig0040569:15129-15148 Msa1459990:intron 30.0%
AAGAGGTGAGTAAACAAAAT+TGG + tig0040569:15762-15781 Msa1459990:intergenic 30.0%
CATCTCATGACTTACAATAT+TGG + tig0040569:15960-15979 Msa1459990:intergenic 30.0%
! TTTTTCACTGAAACCATAGA+TGG + tig0040569:16091-16110 Msa1459990:intergenic 30.0%
TATGGTTTCAGTGAAAAAGT+GGG - tig0040569:16093-16112 Msa1459990:intron 30.0%
!! GTTTAGTCATTTTGCTGATA+TGG - tig0040569:16527-16546 Msa1459990:CDS 30.0%
! GAAATAGACTTTGATTAGCT+TGG + tig0040569:16622-16641 Msa1459990:intergenic 30.0%
ACAATATGGTCTACTAATCC+TGG + tig0040569:13669-13688 Msa1459990:intergenic 35.0%
CAGTTGCCAAAATATATGTG+AGG - tig0040569:13703-13722 Msa1459990:three_prime_UTR 35.0%
GGTCGTGGAATATTTAACAT+TGG - tig0040569:14032-14051 Msa1459990:CDS 35.0%
CCTAAAGAAAAAGTGGACAT+GGG + tig0040569:14185-14204 Msa1459990:intergenic 35.0%
!!! CCATGTCCACTTTTTCTTTA+GGG - tig0040569:14183-14202 Msa1459990:CDS 35.0%
ACAACTCCCTAAAGAAAAAG+TGG + tig0040569:14192-14211 Msa1459990:intergenic 35.0%
!! ACTTTTTCTTTAGGGAGTTG+TGG - tig0040569:14191-14210 Msa1459990:CDS 35.0%
CGTATTTCTTAGGATTCTTG+AGG + tig0040569:14349-14368 Msa1459990:intergenic 35.0%
!!! AAGAGCACCTTTTGGAATTT+TGG + tig0040569:14384-14403 Msa1459990:intergenic 35.0%
!!! TGCAGTTGCTTTTGCTAAAA+GGG + tig0040569:14435-14454 Msa1459990:intergenic 35.0%
! TTTTAGCAAAAGCAACTGCA+GGG - tig0040569:14435-14454 Msa1459990:intron 35.0%
GAACCAGATATGGAAAGAAA+TGG + tig0040569:14473-14492 Msa1459990:intergenic 35.0%
CATGAAATCAGAACCAGATA+TGG + tig0040569:14483-14502 Msa1459990:intergenic 35.0%
!! CATATCTGGTTCTGATTTCA+TGG - tig0040569:14481-14500 Msa1459990:intron 35.0%
ATGAGATTGATGCAATTGGT+CGG - tig0040569:14588-14607 Msa1459990:CDS 35.0%
TATTAGACAACGCCTTACTT+AGG - tig0040569:14744-14763 Msa1459990:CDS 35.0%
GTACATCAATTGATATCGTG+CGG + tig0040569:14784-14803 Msa1459990:intergenic 35.0%
TGATGAATCACAAGTCACAA+TGG - tig0040569:14970-14989 Msa1459990:intron 35.0%
AATACTCATGTTTCTTGCCT+AGG - tig0040569:15494-15513 Msa1459990:CDS 35.0%
TTCCAGCTTACTTATTACCT+AGG + tig0040569:15514-15533 Msa1459990:intergenic 35.0%
AGGTAATAAGTAAGCTGGAA+AGG - tig0040569:15514-15533 Msa1459990:CDS 35.0%
AAAGTAACTATTGTTCCTCG+CGG - tig0040569:15609-15628 Msa1459990:CDS 35.0%
GTTCTCACTAGGAACATATT+GGG + tig0040569:15655-15674 Msa1459990:intergenic 35.0%
AAATGATGAAACAACCTGCT+CGG + tig0040569:15739-15758 Msa1459990:intergenic 35.0%
!! TACAATATTGGGAAGCATCA+AGG + tig0040569:15948-15967 Msa1459990:intergenic 35.0%
AAGTCATGAGATGAGTATGA+TGG - tig0040569:15967-15986 Msa1459990:CDS 35.0%
! ATGGTTTCTGTCCCTTTTTA+CGG - tig0040569:15986-16005 Msa1459990:CDS 35.0%
TATTTGGGCATATGTCATCT+TGG + tig0040569:16067-16086 Msa1459990:intergenic 35.0%
GAAACCATAGATGGCTATTT+GGG + tig0040569:16082-16101 Msa1459990:intergenic 35.0%
TGAAACCATAGATGGCTATT+TGG + tig0040569:16083-16102 Msa1459990:intergenic 35.0%
CTATGGTTTCAGTGAAAAAG+TGG - tig0040569:16092-16111 Msa1459990:intron 35.0%
TACTGGTAACATCATTGATC+AGG - tig0040569:16170-16189 Msa1459990:intron 35.0%
GTGTTCTTCTATAAGCTGTA+TGG + tig0040569:16232-16251 Msa1459990:intergenic 35.0%
ACAGCTTATAGAAGAACACA+AGG - tig0040569:16233-16252 Msa1459990:CDS 35.0%
TTCGCTGTCTGCTTGATTAA+GGG + tig0040569:13736-13755 Msa1459990:intergenic 40.0%
!!! TGGAAGTGTTGAGTCTTTTG+AGG - tig0040569:13815-13834 Msa1459990:CDS 40.0%
!! GTCTTTTGAGGAGAAGTTAG+AGG - tig0040569:13827-13846 Msa1459990:CDS 40.0%
!! TTCTGAAATGGTTTGGTACC+AGG - tig0040569:13905-13924 Msa1459990:CDS 40.0%
GAGAGTTCCCAAAATCAACA+GGG + tig0040569:13952-13971 Msa1459990:intergenic 40.0%
AGAGAGTTCCCAAAATCAAC+AGG + tig0040569:13953-13972 Msa1459990:intergenic 40.0%
!!! TGTTGATTTTGGGAACTCTC+TGG - tig0040569:13952-13971 Msa1459990:CDS 40.0%
! TTTGGGAACTCTCTGGTTTA+TGG - tig0040569:13959-13978 Msa1459990:CDS 40.0%
! TTGGGAACTCTCTGGTTTAT+GGG - tig0040569:13960-13979 Msa1459990:CDS 40.0%
! TTTATGGGAAGGAAAGTGCA+AGG - tig0040569:13975-13994 Msa1459990:CDS 40.0%
! AAAGTGCAAGGTGGATTTGT+TGG - tig0040569:13987-14006 Msa1459990:CDS 40.0%
GGAAAGGCAATGATCAACTA+GGG + tig0040569:14164-14183 Msa1459990:intergenic 40.0%
AGAAAAAGTGGACATGGGAA+AGG + tig0040569:14180-14199 Msa1459990:intergenic 40.0%
!!! CCCATGTCCACTTTTTCTTT+AGG - tig0040569:14182-14201 Msa1459990:CDS 40.0%
CCCTAAAGAAAAAGTGGACA+TGG + tig0040569:14186-14205 Msa1459990:intergenic 40.0%
CGAGGCAAAGCAAGAAATTA+TGG - tig0040569:14310-14329 Msa1459990:intron 40.0%
CCAAGCTCTTCGTATTTCTT+AGG + tig0040569:14359-14378 Msa1459990:intergenic 40.0%
CCTAAGAAATACGAAGAGCT+TGG - tig0040569:14356-14375 Msa1459990:intron 40.0%
!! CTTGGTGCCAAAATTCCAAA+AGG - tig0040569:14374-14393 Msa1459990:intron 40.0%
!! AATTCCAAAAGGTGCTCTTC+TGG - tig0040569:14385-14404 Msa1459990:intron 40.0%
!!! CTGCAGTTGCTTTTGCTAAA+AGG + tig0040569:14436-14455 Msa1459990:intergenic 40.0%
! CTTTTAGCAAAAGCAACTGC+AGG - tig0040569:14434-14453 Msa1459990:intron 40.0%
TTTAGCAAAAGCAACTGCAG+GGG - tig0040569:14436-14455 Msa1459990:intron 40.0%
!! GTGCCATTTCTTTCCATATC+TGG - tig0040569:14467-14486 Msa1459990:intron 40.0%
ATGGAAATGTTTGTCGGTGT+TGG - tig0040569:14500-14519 Msa1459990:intron 40.0%
!! GAAACTTGTTTCTGGAAGCA+AGG - tig0040569:14537-14556 Msa1459990:intron 40.0%
TTGATGCAATTGGTCGGAAA+AGG - tig0040569:14594-14613 Msa1459990:CDS 40.0%
TGATGCAATTGGTCGGAAAA+GGG - tig0040569:14595-14614 Msa1459990:CDS 40.0%
! CAATTGTTGGTGGAAATGGA+TGG - tig0040569:14668-14687 Msa1459990:CDS 40.0%
! TTGGTGGAAATGGATGGTTT+TGG - tig0040569:14674-14693 Msa1459990:CDS 40.0%
GAGAATAATATGAAGGCTCG+TGG + tig0040569:14865-14884 Msa1459990:intergenic 40.0%
AGTCACAATGGATCATTTCG+AGG - tig0040569:14982-15001 Msa1459990:intron 40.0%
! TGGTTTGGAGAAGAAGAACA+GGG - tig0040569:15027-15046 Msa1459990:intron 40.0%
TGCCTAGGTAATAAGTAAGC+TGG - tig0040569:15509-15528 Msa1459990:CDS 40.0%
GGTTCTCACTAGGAACATAT+TGG + tig0040569:15656-15675 Msa1459990:intergenic 40.0%
! GATATGACTTGTATGACCCT+TGG - tig0040569:15702-15721 Msa1459990:CDS 40.0%
ATGAGAACCTGCCGTAAAAA+GGG + tig0040569:16000-16019 Msa1459990:intergenic 40.0%
AATGAGAACCTGCCGTAAAA+AGG + tig0040569:16001-16020 Msa1459990:intergenic 40.0%
! TTTTTACGGCAGGTTCTCAT+TGG - tig0040569:16000-16019 Msa1459990:intron 40.0%
TATGCCCAAATAGCCATCTA+TGG - tig0040569:16075-16094 Msa1459990:intron 40.0%
AGTACTTCACCAAGATGACT+TGG - tig0040569:16296-16315 Msa1459990:CDS 40.0%
AGATTCGAACCAAGTCATCT+TGG + tig0040569:16308-16327 Msa1459990:intergenic 40.0%
!! AGATGACTTGGTTCGAATCT+TGG - tig0040569:16308-16327 Msa1459990:CDS 40.0%
!! GATGACTTGGTTCGAATCTT+GGG - tig0040569:16309-16328 Msa1459990:CDS 40.0%
TAAGCTAGGGTTTCAAGATG+AGG - tig0040569:16377-16396 Msa1459990:CDS 40.0%
GCTGATATGGACAACTTGTA+CGG - tig0040569:16540-16559 Msa1459990:CDS 40.0%
TCGCTGTCTGCTTGATTAAG+GGG + tig0040569:13735-13754 Msa1459990:intergenic 45.0%
CTTCGCTGTCTGCTTGATTA+AGG + tig0040569:13737-13756 Msa1459990:intergenic 45.0%
GCGCAAATCTCATTAACTCC+TGG + tig0040569:13926-13945 Msa1459990:intergenic 45.0%
GTTCCCAAAATCAACAGGGT+TGG + tig0040569:13948-13967 Msa1459990:intergenic 45.0%
! GAACTCTCTGGTTTATGGGA+AGG - tig0040569:13964-13983 Msa1459990:CDS 45.0%
GGGAAAGGCAATGATCAACT+AGG + tig0040569:14165-14184 Msa1459990:intergenic 45.0%
! AAAGGGTTTTTCCTGTGCCT+GGG + tig0040569:14418-14437 Msa1459990:intergenic 45.0%
! AAAAGGGTTTTTCCTGTGCC+TGG + tig0040569:14419-14438 Msa1459990:intergenic 45.0%
AACAAGTTTCTCACCCTGGA+TGG + tig0040569:14527-14546 Msa1459990:intergenic 45.0%
CAGAAACAAGTTTCTCACCC+TGG + tig0040569:14531-14550 Msa1459990:intergenic 45.0%
! CAGGGTGAGAAACTTGTTTC+TGG - tig0040569:14529-14548 Msa1459990:intron 45.0%
GATGCAATTGGTCGGAAAAG+GGG - tig0040569:14596-14615 Msa1459990:CDS 45.0%
TGGTCACGACCTTTAATGTC+AGG + tig0040569:14806-14825 Msa1459990:intergenic 45.0%
TCCAGCAAATCCTGGAGTAA+GGG + tig0040569:14900-14919 Msa1459990:intergenic 45.0%
ATTTCGAGGCAGCTATCGAT+AGG - tig0040569:14996-15015 Msa1459990:intron 45.0%
GCAGCTATCGATAGGATCAT+TGG - tig0040569:15004-15023 Msa1459990:intron 45.0%
GCTATCGATAGGATCATTGG+TGG - tig0040569:15007-15026 Msa1459990:intron 45.0%
! CGATAGGATCATTGGTGGTT+TGG - tig0040569:15012-15031 Msa1459990:intron 45.0%
! GTGGTTTGGAGAAGAAGAAC+AGG - tig0040569:15026-15045 Msa1459990:intron 45.0%
TTGGAGAAGAAGAACAGGGT+AGG - tig0040569:15031-15050 Msa1459990:intron 45.0%
TTCCTAGTGAGAACCTTCTC+AGG - tig0040569:15661-15680 Msa1459990:CDS 45.0%
TGAGAACCTTCTCAGGACAA+AGG - tig0040569:15668-15687 Msa1459990:CDS 45.0%
! ATGACTTGTATGACCCTTGG+TGG - tig0040569:15705-15724 Msa1459990:CDS 45.0%
! TTTCTGTCCCTTTTTACGGC+AGG - tig0040569:15990-16009 Msa1459990:CDS 45.0%
!! CAAGTCATTTTGTGCTCCAG+TGG + tig0040569:16034-16053 Msa1459990:intergenic 45.0%
CACTGGAGCACAAAATGACT+TGG - tig0040569:16032-16051 Msa1459990:intron 45.0%
!! CATTTTGAGGGAAAGAGAGG+AGG + tig0040569:16119-16138 Msa1459990:intergenic 45.0%
!! CGTCATTTTGAGGGAAAGAG+AGG + tig0040569:16122-16141 Msa1459990:intergenic 45.0%
!! CAAACGCGTCGTCATTTTGA+GGG + tig0040569:16131-16150 Msa1459990:intergenic 45.0%
CTCAAAATGACGACGCGTTT+GGG - tig0040569:16130-16149 Msa1459990:intron 45.0%
! TTGATCAGGAAGTGCGAGAT+TGG - tig0040569:16184-16203 Msa1459990:intron 45.0%
! TGATCAGGAAGTGCGAGATT+GGG - tig0040569:16185-16204 Msa1459990:intron 45.0%
AACTATGTGGGAACAACCTC+AGG + tig0040569:16465-16484 Msa1459990:intergenic 45.0%
!!! AAACATTTTATATTTTAAAA+AGG + tig0040569:15095-15114 Msa1459990:intergenic 5.0%
CAAGGAACCCTTCCTGCAAA+GGG - tig0040569:13759-13778 Msa1459990:three_prime_UTR 50.0%
ACCAGATCCCTTTGCAGGAA+GGG + tig0040569:13769-13788 Msa1459990:intergenic 50.0%
!!! TGCGCCAACCCTGTTGATTT+TGG - tig0040569:13941-13960 Msa1459990:CDS 50.0%
!!! GCGCCAACCCTGTTGATTTT+GGG - tig0040569:13942-13961 Msa1459990:CDS 50.0%
! ATGGGAAGGAAAGTGCAAGG+TGG - tig0040569:13978-13997 Msa1459990:CDS 50.0%
!! GTGCAAGGTGGATTTGTTGG+TGG - tig0040569:13990-14009 Msa1459990:CDS 50.0%
!! CAAGGTGGATTTGTTGGTGG+TGG - tig0040569:13993-14012 Msa1459990:CDS 50.0%
TCCACTGGTAAGAATGGTCG+TGG - tig0040569:14017-14036 Msa1459990:CDS 50.0%
TCCACGACCATTCTTACCAG+TGG + tig0040569:14021-14040 Msa1459990:intergenic 50.0%
!! TCCAAAAGGTGCTCTTCTGG+TGG - tig0040569:14388-14407 Msa1459990:intron 50.0%
!! CCAAAAGGTGCTCTTCTGGT+GGG - tig0040569:14389-14408 Msa1459990:intron 50.0%
! AAGGGTTTTTCCTGTGCCTG+GGG + tig0040569:14417-14436 Msa1459990:intergenic 50.0%
!!! GATGGTTTTGGAACCACTGC+TGG - tig0040569:14686-14705 Msa1459990:CDS 50.0%
TAGCACAACAACTCCAGCAG+TGG + tig0040569:14702-14721 Msa1459990:intergenic 50.0%
ACAACGCCTTACTTAGGCCT+GGG - tig0040569:14750-14769 Msa1459990:CDS 50.0%
AAAACGCCCAGGCCTAAGTA+AGG + tig0040569:14759-14778 Msa1459990:intergenic 50.0%
CTCCAGCAAATCCTGGAGTA+AGG + tig0040569:14901-14920 Msa1459990:intergenic 50.0%
ATGTCTGCTCCAGCAAATCC+TGG + tig0040569:14908-14927 Msa1459990:intergenic 50.0%
AAGCTGCTCTGATTGCTGCA+AGG - tig0040569:14945-14964 Msa1459990:intron 50.0%
ACCGTTGCTTACCATGAAGC+AGG - tig0040569:15540-15559 Msa1459990:CDS 50.0%
GCCTGCTTCATGGTAAGCAA+CGG + tig0040569:15544-15563 Msa1459990:intergenic 50.0%
AGAACCAACCTGCAACAGCA+TGG + tig0040569:15566-15585 Msa1459990:intergenic 50.0%
!! TGCTGTTGCAGGTTGGTTCT+TGG - tig0040569:15566-15585 Msa1459990:CDS 50.0%
GTCCTGAGAAGGTTCTCACT+AGG + tig0040569:15666-15685 Msa1459990:intergenic 50.0%
! CAGGACAAAGGAGCAGCTTT+TGG - tig0040569:15680-15699 Msa1459990:CDS 50.0%
! CTTGTATGACCCTTGGTGGT+CGG - tig0040569:15709-15728 Msa1459990:CDS 50.0%
! TTGTATGACCCTTGGTGGTC+GGG - tig0040569:15710-15729 Msa1459990:CDS 50.0%
!! ATTGGGAAGCATCAAGGAGC+AGG + tig0040569:15942-15961 Msa1459990:intergenic 50.0%
CTCATTGGAGCAATCTCCAC+TGG - tig0040569:16015-16034 Msa1459990:intron 50.0%
!! CCAAACGCGTCGTCATTTTG+AGG + tig0040569:16132-16151 Msa1459990:intergenic 50.0%
CCTCAAAATGACGACGCGTT+TGG - tig0040569:16129-16148 Msa1459990:intron 50.0%
GCGTTTGGGAAACCATACAG+CGG - tig0040569:16144-16163 Msa1459990:intron 50.0%
AAACCATACAGCGGCGATAC+TGG - tig0040569:16153-16172 Msa1459990:intron 50.0%
TTACCAGTATCGCCGCTGTA+TGG + tig0040569:16159-16178 Msa1459990:intergenic 50.0%
GTGGGTTCTGCACTCTTGAA+GGG + tig0040569:16342-16361 Msa1459990:intergenic 50.0%
TGTGGGTTCTGCACTCTTGA+AGG + tig0040569:16343-16362 Msa1459990:intergenic 50.0%
AACCATCGTCGATGAAGCCA+AGG - tig0040569:16413-16432 Msa1459990:CDS 50.0%
ATCGTCGATGAAGCCAAGGA+GGG - tig0040569:16417-16436 Msa1459990:CDS 50.0%
!! GTCTTCACCTCTAGAACCTG+AGG - tig0040569:16446-16465 Msa1459990:CDS 50.0%
! GGAACAACCTCAGGTTCTAG+AGG + tig0040569:16456-16475 Msa1459990:intergenic 50.0%
CAAGCAGACAGCGAAGTCCA+AGG - tig0040569:13741-13760 Msa1459990:three_prime_UTR 55.0%
CCTTTGCAGGAAGGGTTCCT+TGG + tig0040569:13761-13780 Msa1459990:intergenic 55.0%
CCAAGGAACCCTTCCTGCAA+AGG - tig0040569:13758-13777 Msa1459990:three_prime_UTR 55.0%
ACCCTTCCTGCAAAGGGATC+TGG - tig0040569:13765-13784 Msa1459990:three_prime_UTR 55.0%
CACCAGATCCCTTTGCAGGA+AGG + tig0040569:13770-13789 Msa1459990:intergenic 55.0%
CTTCCTGCAAAGGGATCTGG+TGG - tig0040569:13768-13787 Msa1459990:three_prime_UTR 55.0%
!! GAGGAAGCGCAAGAAGCACT+AGG - tig0040569:13846-13865 Msa1459990:CDS 55.0%
!! TTTGTTGGTGGTGGCTCCAC+TGG - tig0040569:14002-14021 Msa1459990:CDS 55.0%
GGTGGCTCCACTGGTAAGAA+TGG - tig0040569:14011-14030 Msa1459990:CDS 55.0%
! AGATGTTGCTGGCTGTGACG+AGG - tig0040569:14292-14311 Msa1459990:intron 55.0%
!!! CCCACCAGAAGAGCACCTTT+TGG + tig0040569:14392-14411 Msa1459990:intergenic 55.0%
! AGGGTTTTTCCTGTGCCTGG+GGG + tig0040569:14416-14435 Msa1459990:intergenic 55.0%
AAAGCAACTGCAGGGGAGTC+TGG - tig0040569:14443-14462 Msa1459990:intron 55.0%
!! TTGTCGGTGTTGGACCATCC+AGG - tig0040569:14510-14529 Msa1459990:intron 55.0%
!! TGTCGGTGTTGGACCATCCA+GGG - tig0040569:14511-14530 Msa1459990:intron 55.0%
ATTGGTCGGAAAAGGGGTCG+TGG - tig0040569:14602-14621 Msa1459990:CDS 55.0%
GCTGGAGTTGTTGTGCTAGC+AGG - tig0040569:14704-14723 Msa1459990:CDS 55.0%
GACAACGCCTTACTTAGGCC+TGG - tig0040569:14749-14768 Msa1459990:CDS 55.0%
GCCCTTACTCCAGGATTTGC+TGG - tig0040569:14896-14915 Msa1459990:intron 55.0%
CAACAGCATGGCCTGCTTCA+TGG + tig0040569:15554-15573 Msa1459990:intergenic 55.0%
GCTGCTCCTTTGTCCTGAGA+AGG + tig0040569:15677-15696 Msa1459990:intergenic 55.0%
CTCCTTGGCTTCATCGACGA+TGG + tig0040569:16418-16437 Msa1459990:intergenic 55.0%
CATCGTCGATGAAGCCAAGG+AGG - tig0040569:16416-16435 Msa1459990:CDS 55.0%
ATGAAGCCAAGGAGGGTGGT+GGG - tig0040569:16424-16443 Msa1459990:CDS 55.0%
TGGCCACCAGATCCCTTTGC+AGG + tig0040569:13774-13793 Msa1459990:intergenic 60.0%
AGGGGTCGTGGAGGTTTCTC+TGG - tig0040569:14614-14633 Msa1459990:CDS 60.0%
ATCGTGCGGTCAAAACGCCC+AGG + tig0040569:14770-14789 Msa1459990:intergenic 60.0%
AGGCTTGCAGCCCTTACTCC+AGG - tig0040569:14887-14906 Msa1459990:intron 60.0%
GAAGCAGGCCATGCTGTTGC+AGG - tig0040569:15555-15574 Msa1459990:CDS 60.0%
CAGGCCATGCTGTTGCAGGT+TGG - tig0040569:15559-15578 Msa1459990:CDS 60.0%
GTCGATGAAGCCAAGGAGGG+TGG - tig0040569:16420-16439 Msa1459990:CDS 60.0%
GATGAAGCCAAGGAGGGTGG+TGG - tig0040569:16423-16442 Msa1459990:CDS 60.0%
TGAAGACCCACCACCCTCCT+TGG + tig0040569:16433-16452 Msa1459990:intergenic 60.0%
GGTCGGAAAAGGGGTCGTGG+AGG - tig0040569:14605-14624 Msa1459990:CDS 65.0%
CTCGCGGCACAGCAGCACTT+GGG - tig0040569:15625-15644 Msa1459990:CDS 65.0%
! GCTCTTCTGGTGGGTCCCCC+AGG - tig0040569:14398-14417 Msa1459990:intron 70.0%
! CCAAGTGCTGCTGTGCCGCG+AGG + tig0040569:15627-15646 Msa1459990:intergenic 70.0%
CCTCGCGGCACAGCAGCACT+TGG - tig0040569:15624-15643 Msa1459990:CDS 70.0%
CTCGGCAGCCCGACCACCAA+GGG + tig0040569:15721-15740 Msa1459990:intergenic 70.0%
! CTGGTGGGTCCCCCAGGCAC+AGG - tig0040569:14404-14423 Msa1459990:intron 75.0%
GCTCGGCAGCCCGACCACCA+AGG + tig0040569:15722-15741 Msa1459990:intergenic 75.0%
TGGTGGTCGGGCTGCCGAGC+AGG - tig0040569:15722-15741 Msa1459990:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0040569 gene 13630 16666 13630 ID=Msa1459990;Name=Msa1459990
tig0040569 mRNA 13630 16666 13630 ID=Msa1459990-mRNA-1;Parent=Msa1459990;Name=Msa1459990-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.66|0.75|1|1|1|4|184|644
tig0040569 exon 13630 14284 13630 ID=Msa1459990-mRNA-1:exon:22501;Parent=Msa1459990-mRNA-1
tig0040569 exon 14553 14780 14553 ID=Msa1459990-mRNA-1:exon:22500;Parent=Msa1459990-mRNA-1
tig0040569 exon 15248 16015 15248 ID=Msa1459990-mRNA-1:exon:22499;Parent=Msa1459990-mRNA-1
tig0040569 exon 16199 16666 16199 ID=Msa1459990-mRNA-1:exon:22498;Parent=Msa1459990-mRNA-1
tig0040569 CDS 16199 16666 16199 ID=Msa1459990-mRNA-1:cds;Parent=Msa1459990-mRNA-1
tig0040569 CDS 15248 16015 15248 ID=Msa1459990-mRNA-1:cds;Parent=Msa1459990-mRNA-1
tig0040569 CDS 14553 14780 14553 ID=Msa1459990-mRNA-1:cds;Parent=Msa1459990-mRNA-1
tig0040569 CDS 13814 14284 13814 ID=Msa1459990-mRNA-1:cds;Parent=Msa1459990-mRNA-1
tig0040569 three_prime_UTR 13630 13813 13630 ID=Msa1459990-mRNA-1:three_prime_utr;Parent=Msa1459990-mRNA-1
Gene Sequence

>Msa1459990

ATTAGTTTCCAGGAGTTTAAAAATAAGCTTTTGGAACCAGGATTAGTAGACCATATTGTTGTCTCCAACAAATCAGTTGCCAAAATATATGTGAGGAACTCTCCCCTTAATCAAGCAGACAGCGAAGTCCAAGGAACCCTTCCTGCAAAGGGATCTGGTGGCCAATTTAAATATGTAATCAATATTGGAAGTGTTGAGTCTTTTGAGGAGAAGTTAGAGGAAGCGCAAGAAGCACTAGGCGTTGACTCTCACAATTTTGTACCTGTTATATATTCTTCTGAAATGGTTTGGTACCAGGAGTTAATGAGATTTGCGCCAACCCTGTTGATTTTGGGAACTCTCTGGTTTATGGGAAGGAAAGTGCAAGGTGGATTTGTTGGTGGTGGCTCCACTGGTAAGAATGGTCGTGGAATATTTAACATTGGAAAAGCACATGTTACTAAAGTAGACAAAAATACCAAAAACAAGGTTTATTTTAAAGATGTTGCTGGCTGTGACGAGGCAAAGCAAGAAATTATGGAGTTTGTGCACTTCCTCAAGAATCCTAAGAAATACGAAGAGCTTGGTGCCAAAATTCCAAAAGGTGCTCTTCTGGTGGGTCCCCCAGGCACAGGAAAAACCCTTTTAGCAAAAGCAACTGCAGGGGAGTCTGGTGTGCCATTTCTTTCCATATCTGGTTCTGATTTCATGGAAATGTTTGTCGGTGTTGGACCATCCAGGGTGAGAAACTTGTTTCTGGAAGCAAGGCAGTGTGCTCCCAGTATAGTATTTATTGATGAGATTGATGCAATTGGTCGGAAAAGGGGTCGTGGAGGTTTCTCTGGTTCAAATGATGAGCGTGAAAGTACTTTAAATCAATTGTTGGTGGAAATGGATGGTTTTGGAACCACTGCTGGAGTTGTTGTGCTAGCAGGTACAAATAGAGCTGATATATTAGACAACGCCTTACTTAGGCCTGGGCGTTTTGACCGCACGATATCAATTGATGTACCTGACATTAAAGGTCGTGACCAGATATTTCAGATTTATTTGAAAAAAATCAAACTTGACCACGAGCCTTCATATTATTCTCAAAGGCTTGCAGCCCTTACTCCAGGATTTGCTGGAGCAGACATTGCTAATGTTTGCAATGAAGCTGCTCTGATTGCTGCAAGGACTGATGAATCACAAGTCACAATGGATCATTTCGAGGCAGCTATCGATAGGATCATTGGTGGTTTGGAGAAGAAGAACAGGGTAATAAGTAAGCTGGAAAGGCGTACCGTTGCTTACCATGAAGCAGGCCATGCTGTTGCAGGTTGGTTCTTGGAACATTGTGAGCCATTGTTGAAAGTAACTATTGTTCCTCGCGGCACAGCAGCACTTGGGTTTGCCCAATATGTTCCTAGTGAGAACCTTCTCAGGACAAAGGAGCAGCTTTTGGATATGACTTGTATGACCCTTGGTGGTCGGGCTGCCGAGCAGGTTCTCATTGGAGCAATCTCCACTGGAGCACAAAATGACTTGGAGAAAGTGACCAAGATGACATATGCCCAAATAGCCATCTATGGTTTCAGTGAAAAAGTGGGCCTCCTCTCTTTCCCTCAAAATGACGACGCGTTTGGGAAACCATACAGCGGCGATACTGGTAACATCATTGATCAGGAAGTGCGAGATTGGGTGAAACATGCATATGAACGTACCATACAGCTTATAGAAGAACACAAGGAGAAAATAGCTCAAATTGCAGAGTTACTTCTCGAAAAAGAAGTACTTCACCAAGATGACTTGGTTCGAATCTTGGGTGAACGACCCTTCAAGAGTGCAGAACCCACAAATTACGATAGATTTAAGCTAGGGTTTCAAGATGAGGAGAAAGCTGCAGAAACCATCGTCGATGAAGCCAAGGAGGGTGGTGGGTCTTCACCTCTAGAACCTGAGGTTGTTCCCACATAG
Protein sequence

>Msa1459990

ISFQEFKNKLLEPGLVDHIVVSNKSVAKIYVRNSPLNQADSEVQGTLPAKGSGGQFKYVINIGSVESFEEKLEEAQEALGVDSHNFVPVIYSSEMVWYQELMRFAPTLLILGTLWFMGRKVQGGFVGGGSTGKNGRGIFNIGKAHVTKVDKNTKNKVYFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFLEARQCAPSIVFIDEIDAIGRKRGRGGFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRADILDNALLRPGRFDRTISIDVPDIKGRDQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARTDESQVTMDHFEAAIDRIIGGLEKKNRVISKLERRTVAYHEAGHAVAGWFLEHCEPLLKVTIVPRGTAALGFAQYVPSENLLRTKEQLLDMTCMTLGGRAAEQVLIGAISTGAQNDLEKVTKMTYAQIAIYGFSEKVGLLSFPQNDDAFGKPYSGDTGNIIDQEVRDWVKHAYERTIQLIEEHKEKIAQIAELLLEKEVLHQDDLVRILGERPFKSAEPTNYDRFKLGFQDEEKAAETIVDEAKEGGGSSPLEPEVVPT*