Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0551010 | XP_003607111.1 | 93.146 | 321 | 22 | 0 | 1 | 321 | 1 | 321 | 0.0 | 622 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0551010 | sp|E7C196|MER_ERYCB | 60.802 | 324 | 120 | 1 | 4 | 320 | 3 | 326 | 1.06e-137 | 396 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0551010 | G7JL33 | 93.146 | 321 | 22 | 0 | 1 | 321 | 1 | 321 | 0.0 | 622 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0551010 | Msa0551020 | 0.831513 | 1.599952e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0551010 | MtrunA17_Chr6g0480021 | 77.882 | 321 | 53 | 1 | 1 | 321 | 1 | 303 | 0.0 | 509 |
| Msa0551010 | MtrunA17_Chr6g0480011 | 65.421 | 321 | 110 | 1 | 1 | 320 | 1 | 321 | 2.80e-158 | 445 |
| Msa0551010 | MtrunA17_Chr6g0479981 | 61.321 | 318 | 122 | 1 | 1 | 318 | 1 | 317 | 8.68e-152 | 428 |
| Msa0551010 | MtrunA17_Chr1g0173621 | 52.322 | 323 | 143 | 2 | 1 | 320 | 1 | 315 | 1.60e-117 | 341 |
| Msa0551010 | MtrunA17_Chr4g0036261 | 87.912 | 182 | 22 | 0 | 139 | 320 | 2 | 183 | 3.21e-116 | 333 |
| Msa0551010 | MtrunA17_Chr4g0036301 | 92.442 | 172 | 13 | 0 | 150 | 321 | 1 | 172 | 3.32e-115 | 330 |
| Msa0551010 | MtrunA17_Chr4g0036321 | 90.058 | 171 | 17 | 0 | 150 | 320 | 1 | 171 | 1.83e-110 | 318 |
| Msa0551010 | MtrunA17_Chr3g0121001 | 48.598 | 321 | 149 | 6 | 3 | 318 | 4 | 313 | 5.33e-102 | 302 |
| Msa0551010 | MtrunA17_Chr4g0018921 | 47.771 | 314 | 157 | 6 | 9 | 320 | 6 | 314 | 3.09e-93 | 280 |
| Msa0551010 | MtrunA17_Chr8g0368921 | 45.687 | 313 | 163 | 5 | 11 | 320 | 10 | 318 | 4.64e-89 | 269 |
| Msa0551010 | MtrunA17_Chr5g0447941 | 48.137 | 322 | 152 | 6 | 1 | 318 | 1 | 311 | 9.06e-89 | 268 |
| Msa0551010 | MtrunA17_Chr5g0447951 | 49.502 | 301 | 146 | 4 | 1 | 298 | 1 | 298 | 1.82e-88 | 267 |
| Msa0551010 | MtrunA17_Chr5g0447961 | 49.502 | 301 | 146 | 4 | 1 | 298 | 1 | 298 | 1.82e-88 | 267 |
| Msa0551010 | MtrunA17_Chr8g0368931 | 43.260 | 319 | 174 | 4 | 3 | 320 | 2 | 314 | 2.39e-83 | 254 |
| Msa0551010 | MtrunA17_Chr7g0239701 | 45.192 | 312 | 161 | 6 | 11 | 320 | 14 | 317 | 1.68e-79 | 244 |
| Msa0551010 | MtrunA17_Chr4g0009531 | 44.479 | 317 | 155 | 7 | 11 | 320 | 10 | 312 | 6.48e-79 | 243 |
| Msa0551010 | MtrunA17_Chr4g0009581 | 44.194 | 310 | 153 | 7 | 11 | 318 | 11 | 302 | 9.77e-72 | 224 |
| Msa0551010 | MtrunA17_Chr4g0036291 | 95.238 | 105 | 5 | 0 | 1 | 105 | 1 | 105 | 4.40e-69 | 210 |
| Msa0551010 | MtrunA17_Chr4g0036311 | 91.429 | 105 | 9 | 0 | 1 | 105 | 1 | 105 | 8.04e-67 | 205 |
| Msa0551010 | MtrunA17_Chr7g0243551 | 40.989 | 283 | 158 | 4 | 11 | 293 | 17 | 290 | 1.61e-63 | 203 |
| Msa0551010 | MtrunA17_Chr4g0036051 | 38.851 | 296 | 165 | 6 | 9 | 294 | 3 | 292 | 2.59e-59 | 192 |
| Msa0551010 | MtrunA17_Chr4g0036251 | 80.952 | 105 | 14 | 2 | 1 | 105 | 1 | 99 | 2.84e-55 | 175 |
| Msa0551010 | MtrunA17_Chr4g0009621 | 45.228 | 241 | 118 | 4 | 81 | 320 | 1 | 228 | 6.00e-53 | 173 |
| Msa0551010 | MtrunA17_Chr6g0479811 | 61.062 | 113 | 44 | 0 | 190 | 302 | 1 | 113 | 2.45e-45 | 150 |
| Msa0551010 | MtrunA17_Chr6g0479791 | 83.908 | 87 | 12 | 1 | 237 | 321 | 18 | 104 | 1.04e-44 | 148 |
| Msa0551010 | MtrunA17_Chr6g0479801 | 81.250 | 48 | 9 | 0 | 105 | 152 | 38 | 85 | 3.88e-22 | 88.6 |
| Msa0551010 | MtrunA17_Chr3g0127491 | 24.662 | 296 | 170 | 8 | 35 | 294 | 72 | 350 | 1.02e-15 | 77.0 |
| Msa0551010 | MtrunA17_Chr3g0095421 | 25.524 | 286 | 161 | 10 | 42 | 292 | 83 | 351 | 1.51e-14 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0551010 | AT1G59960.1 | 48.923 | 325 | 161 | 2 | 1 | 320 | 1 | 325 | 5.12e-118 | 343 |
| Msa0551010 | AT1G59950.1 | 50.492 | 305 | 150 | 1 | 17 | 320 | 15 | 319 | 4.92e-108 | 318 |
| Msa0551010 | AT2G37790.1 | 48.077 | 312 | 152 | 5 | 11 | 320 | 10 | 313 | 7.46e-95 | 284 |
| Msa0551010 | AT2G37770.2 | 47.500 | 320 | 159 | 5 | 3 | 320 | 2 | 314 | 1.90e-94 | 283 |
| Msa0551010 | AT5G62420.1 | 46.006 | 313 | 161 | 7 | 11 | 320 | 8 | 315 | 2.75e-90 | 272 |
| Msa0551010 | AT3G53880.1 | 46.154 | 312 | 159 | 5 | 11 | 320 | 10 | 314 | 1.23e-87 | 265 |
| Msa0551010 | AT2G37760.2 | 43.730 | 311 | 164 | 4 | 11 | 320 | 10 | 310 | 7.74e-83 | 253 |
| Msa0551010 | AT2G37760.1 | 43.730 | 311 | 164 | 4 | 11 | 320 | 10 | 310 | 7.74e-83 | 253 |
| Msa0551010 | AT5G01670.1 | 41.987 | 312 | 167 | 8 | 11 | 318 | 18 | 319 | 1.69e-78 | 242 |
| Msa0551010 | AT3G53880.2 | 45.614 | 285 | 147 | 4 | 11 | 294 | 10 | 287 | 9.32e-77 | 238 |
| Msa0551010 | AT2G37760.4 | 43.750 | 288 | 152 | 3 | 11 | 298 | 10 | 287 | 1.34e-76 | 236 |
| Msa0551010 | AT2G37760.3 | 43.750 | 288 | 152 | 3 | 11 | 298 | 10 | 287 | 1.34e-76 | 236 |
| Msa0551010 | AT2G37760.5 | 44.056 | 286 | 150 | 3 | 11 | 296 | 10 | 285 | 2.35e-76 | 236 |
| Msa0551010 | AT5G01670.2 | 38.643 | 339 | 167 | 9 | 11 | 318 | 18 | 346 | 2.35e-72 | 228 |
| Msa0551010 | AT2G37760.6 | 44.615 | 260 | 140 | 3 | 62 | 320 | 8 | 264 | 3.92e-68 | 214 |
| Msa0551010 | AT2G37760.7 | 44.615 | 260 | 140 | 3 | 62 | 320 | 8 | 264 | 3.92e-68 | 214 |
| Msa0551010 | AT2G21260.1 | 37.710 | 297 | 169 | 6 | 8 | 294 | 2 | 292 | 2.11e-65 | 208 |
| Msa0551010 | AT2G21250.1 | 37.037 | 297 | 171 | 6 | 8 | 294 | 2 | 292 | 3.00e-64 | 205 |
| Msa0551010 | AT2G37770.1 | 50.000 | 210 | 97 | 4 | 3 | 211 | 2 | 204 | 8.65e-62 | 198 |
| Msa0551010 | AT2G21250.2 | 37.815 | 238 | 132 | 6 | 8 | 235 | 2 | 233 | 4.09e-48 | 162 |
| Msa0551010 | AT2G21260.2 | 34.247 | 219 | 132 | 4 | 86 | 294 | 8 | 224 | 5.61e-41 | 143 |
| Msa0551010 | AT5G53580.1 | 22.857 | 280 | 163 | 9 | 42 | 285 | 80 | 342 | 1.11e-12 | 68.6 |
| Msa0551010 | AT1G60750.1 | 25.000 | 328 | 192 | 13 | 13 | 314 | 21 | 320 | 8.93e-11 | 62.4 |
Find 75 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGTCCTCACCTCAATTT+TGG | 0.184617 | 4_1:+46592942 | Msa0551010:CDS |
| ATTAACTGCAGGAGAGATTT+TGG | 0.209158 | 4_1:-46593486 | None:intergenic |
| ACGTCTTGTTTCAACCTTAC+TGG | 0.266387 | 4_1:-46593311 | None:intergenic |
| GTTGAAGGCCATAACTTTAA+AGG | 0.283083 | 4_1:+46593332 | Msa0551010:CDS |
| TTGGTTGATGCCATTGAAAT+AGG | 0.299974 | 4_1:+46592961 | Msa0551010:CDS |
| AATATGCCAATGATAGGTTT+TGG | 0.303449 | 4_1:+46592892 | Msa0551010:CDS |
| TTTGGCACTTTCCAAGAGTA+TGG | 0.303663 | 4_1:-46593468 | None:intergenic |
| CAATGGGAATTGCCCCTTGC+TGG | 0.323469 | 4_1:-46594279 | None:intergenic |
| TATCCTCACCTTTAAAGTTA+TGG | 0.331649 | 4_1:-46593340 | None:intergenic |
| TATGGAAGATTGTTATAGAT+TGG | 0.350814 | 4_1:+46593397 | Msa0551010:CDS |
| AATCTCTCCTGCAGTTAATC+AGG | 0.372724 | 4_1:+46593490 | Msa0551010:CDS |
| AAAACACTGAAATATTTGAT+TGG | 0.376362 | 4_1:+46594332 | Msa0551010:CDS |
| GAAATGTTTGTATCTGATAA+TGG | 0.381759 | 4_1:+46594418 | Msa0551010:CDS |
| TGTTCATTACTTCCAAGTTA+TGG | 0.391308 | 4_1:+46593088 | Msa0551010:CDS |
| TGACACCAATAGACTTTACT+AGG | 0.395537 | 4_1:-46593421 | None:intergenic |
| CCAGAGGTGATACTAAATTC+AGG | 0.400690 | 4_1:+46592865 | Msa0551010:CDS |
| TGGATCTCTATTTGATTCAC+TGG | 0.404097 | 4_1:+46593288 | Msa0551010:CDS |
| TCTATTGGTGTCAGCAACTT+TGG | 0.413475 | 4_1:+46593431 | Msa0551010:CDS |
| AGGAGGGTACAAACTAAGTT+GGG | 0.414798 | 4_1:+46593864 | Msa0551010:CDS |
| GATGTTCCAAAACCTATCAT+TGG | 0.419966 | 4_1:-46592898 | None:intergenic |
| AAACACTGAAATATTTGATT+GGG | 0.427776 | 4_1:+46594333 | Msa0551010:CDS |
| ATGGAAGATTGTTATAGATT+GGG | 0.428752 | 4_1:+46593398 | Msa0551010:CDS |
| ATTTGATTCACTGGCCAGTA+AGG | 0.449094 | 4_1:+46593297 | Msa0551010:CDS |
| AGTTTCCTCTGATGCCATGA+TGG | 0.455334 | 4_1:-46593790 | None:intergenic |
| TAATGGACCTTACAAGTCAT+TGG | 0.455554 | 4_1:+46594435 | Msa0551010:CDS |
| TAATCTTGAATTGGAGTATG+TGG | 0.465434 | 4_1:+46593268 | Msa0551010:CDS |
| CCTGAATTTAGTATCACCTC+TGG | 0.467537 | 4_1:-46592865 | None:intergenic |
| TCCTCAATGCAGACTGCTAA+AGG | 0.470577 | 4_1:+46594393 | Msa0551010:CDS |
| TAGAAACAAGAGTGTAGCCC+AGG | 0.476626 | 4_1:+46593936 | Msa0551010:CDS |
| AAAAGGAACATGGGAAGCTA+TGG | 0.478713 | 4_1:+46593379 | Msa0551010:CDS |
| GTTTCCTCTGATGCCATGAT+GGG | 0.489448 | 4_1:-46593789 | None:intergenic |
| AATGGCATCAACCAAAATTG+AGG | 0.495834 | 4_1:-46592953 | None:intergenic |
| TTGGGCCTAGTAAAGTCTAT+TGG | 0.496646 | 4_1:+46593416 | Msa0551010:CDS |
| TTGGGGTTCGCCTGCAGTGA+TGG | 0.500062 | 4_1:+46593882 | Msa0551010:CDS |
| AGCATCAGTACACCATAACT+TGG | 0.506431 | 4_1:-46593100 | None:intergenic |
| TAGGAGGGTACAAACTAAGT+TGG | 0.507601 | 4_1:+46593863 | Msa0551010:CDS |
| ATCGAATTCTCCATCACTGC+AGG | 0.507726 | 4_1:-46593892 | None:intergenic |
| CAGAGGTGATACTAAATTCA+GGG | 0.521393 | 4_1:+46592866 | Msa0551010:CDS |
| TTATACAGATAGCACTAAGA+TGG | 0.527906 | 4_1:+46594251 | Msa0551010:intron |
| GTGTCAAAAGCTTTAGAGCT+AGG | 0.527948 | 4_1:+46593042 | Msa0551010:CDS |
| CAAGTCATTGGAAGAGCTGT+GGG | 0.528282 | 4_1:+46594447 | Msa0551010:CDS |
| AGCTCTTCCAATGACTTGTA+AGG | 0.535075 | 4_1:-46594442 | None:intergenic |
| GCCTTTAGCAGTCTGCATTG+AGG | 0.539010 | 4_1:-46594394 | None:intergenic |
| ATGCCTGTAGCCTATTTCAA+TGG | 0.544065 | 4_1:-46592971 | None:intergenic |
| TGAACCCATCATGGCATCAG+AGG | 0.544247 | 4_1:+46593785 | Msa0551010:CDS |
| ATGCCATTGAAATAGGCTAC+AGG | 0.548301 | 4_1:+46592968 | Msa0551010:CDS |
| TGAAAAGCTTCAACAAGGAA+AGG | 0.559851 | 4_1:+46594302 | Msa0551010:CDS |
| AGGACTTCATGTGGTGGAGA+GGG | 0.561027 | 4_1:-46592928 | None:intergenic |
| AGAGAATTCTGCAAGCAGAA+AGG | 0.561027 | 4_1:+46593814 | Msa0551010:CDS |
| TCATATACCTGATTAACTGC+AGG | 0.563437 | 4_1:-46593497 | None:intergenic |
| AAATTATGCTTGCTTGAGAG+TGG | 0.578049 | 4_1:-46593154 | None:intergenic |
| AGGTGGAAATGAACCCATCA+TGG | 0.580827 | 4_1:+46593776 | Msa0551010:intron |
| GTGAGTGCATGGTCACCACT+AGG | 0.581102 | 4_1:+46593844 | Msa0551010:CDS |
| AAGGAATCCATGTGAGTGCA+TGG | 0.586898 | 4_1:+46593833 | Msa0551010:CDS |
| ACAAGTCATTGGAAGAGCTG+TGG | 0.592554 | 4_1:+46594446 | Msa0551010:CDS |
| TATAATACTGAAGAACCTCT+AGG | 0.593820 | 4_1:+46593012 | Msa0551010:CDS |
| GAGGACTTCATGTGGTGGAG+AGG | 0.594677 | 4_1:-46592929 | None:intergenic |
| TTTGACACAGCTTGGCCTAG+AGG | 0.596039 | 4_1:-46593027 | None:intergenic |
| TAAGATGGATATGCCAGCAA+GGG | 0.596855 | 4_1:+46594266 | Msa0551010:CDS |
| AGGCCATAACTTTAAAGGTG+AGG | 0.603244 | 4_1:+46593337 | Msa0551010:CDS |
| GTGGTGACCATGCACTCACA+TGG | 0.614668 | 4_1:-46593840 | None:intergenic |
| CTAAGATGGATATGCCAGCA+AGG | 0.614817 | 4_1:+46594265 | Msa0551010:CDS |
| CATTGTGAAAAGCTTCAACA+AGG | 0.618998 | 4_1:+46594297 | Msa0551010:CDS |
| CTTAGTTTGTACCCTCCTAG+TGG | 0.627177 | 4_1:-46593859 | None:intergenic |
| AGGTTGAAACAAGACGTTGA+AGG | 0.628014 | 4_1:+46593317 | Msa0551010:CDS |
| TCATTGGAAGAGCTGTGGGA+TGG | 0.633458 | 4_1:+46594451 | Msa0551010:CDS |
| GATTCTGCGCAAAATTGCTG+AGG | 0.639021 | 4_1:+46593912 | Msa0551010:CDS |
| AGTGCATGGTCACCACTAGG+AGG | 0.651978 | 4_1:+46593847 | Msa0551010:CDS |
| AAGATGGATATGCCAGCAAG+GGG | 0.663307 | 4_1:+46594267 | Msa0551010:CDS |
| GGAAACAAACAAAGTTCCAG+AGG | 0.669203 | 4_1:+46592849 | Msa0551010:CDS |
| GGAGGGTACAAACTAAGTTG+GGG | 0.682661 | 4_1:+46593865 | Msa0551010:CDS |
| CATCAACCAAAATTGAGGTG+AGG | 0.683706 | 4_1:-46592948 | None:intergenic |
| GTGCATGGTCACCACTAGGA+GGG | 0.685225 | 4_1:+46593848 | Msa0551010:CDS |
| GAGGTGAGGACTTCATGTGG+TGG | 0.731533 | 4_1:-46592934 | None:intergenic |
| ATTGAGGTGAGGACTTCATG+TGG | 0.753402 | 4_1:-46592937 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACTTGAATTATAAAAT+AGG | - | chr4_1:46594056-46594075 | None:intergenic | 10.0% |
| !! | AAAAACTTGAATTATAAAAT+AGG | - | chr4_1:46594056-46594075 | None:intergenic | 10.0% |
| !!! | TATTATTGTTTTGGTTTTTT+TGG | + | chr4_1:46593230-46593249 | Msa0551010:intron | 15.0% |
| !!! | ATTTTTTAGTAATCTTGAAT+TGG | + | chr4_1:46593259-46593278 | Msa0551010:intron | 15.0% |
| !! | AACTTCATTAAAATCTTAAT+TGG | - | chr4_1:46594019-46594038 | None:intergenic | 15.0% |
| !!! | TATTATTGTTTTGGTTTTTT+TGG | + | chr4_1:46593230-46593249 | Msa0551010:intron | 15.0% |
| !!! | ATTTTTTAGTAATCTTGAAT+TGG | + | chr4_1:46593259-46593278 | Msa0551010:intron | 15.0% |
| !! | AACTTCATTAAAATCTTAAT+TGG | - | chr4_1:46594019-46594038 | None:intergenic | 15.0% |
| !! | ACTTAAAAGAAGTAGAAAAA+AGG | - | chr4_1:46593186-46593205 | None:intergenic | 20.0% |
| !!! | CTTGTCTAATATTATTGTTT+TGG | + | chr4_1:46593221-46593240 | Msa0551010:intron | 20.0% |
| !!! | ACAATTCCTTTTGATATAAA+AGG | + | chr4_1:46593362-46593381 | Msa0551010:CDS | 20.0% |
| !!! | TTTTGATATAAAAGGAACAT+GGG | + | chr4_1:46593370-46593389 | Msa0551010:CDS | 20.0% |
| !!! | TATTGGATACTATAAGTTTT+GGG | - | chr4_1:46593604-46593623 | None:intergenic | 20.0% |
| !!! | TTATTGGATACTATAAGTTT+TGG | - | chr4_1:46593605-46593624 | None:intergenic | 20.0% |
| !!! | CATCATACAAATTCTTATTT+GGG | + | chr4_1:46593750-46593769 | Msa0551010:intron | 20.0% |
| !!! | TAATTCAAGTTTTTTTTCCA+TGG | + | chr4_1:46594062-46594081 | Msa0551010:intron | 20.0% |
| !! | AAAACACTGAAATATTTGAT+TGG | + | chr4_1:46594332-46594351 | Msa0551010:CDS | 20.0% |
| !! | AAACACTGAAATATTTGATT+GGG | + | chr4_1:46594333-46594352 | Msa0551010:CDS | 20.0% |
| !!! | TAATTTTGTCTAATTCTTCT+TGG | - | chr4_1:46594366-46594385 | None:intergenic | 20.0% |
| !! | ACTTAAAAGAAGTAGAAAAA+AGG | - | chr4_1:46593186-46593205 | None:intergenic | 20.0% |
| !!! | CTTGTCTAATATTATTGTTT+TGG | + | chr4_1:46593221-46593240 | Msa0551010:intron | 20.0% |
| !!! | ACAATTCCTTTTGATATAAA+AGG | + | chr4_1:46593362-46593381 | Msa0551010:CDS | 20.0% |
| !!! | TTTTGATATAAAAGGAACAT+GGG | + | chr4_1:46593370-46593389 | Msa0551010:CDS | 20.0% |
| !!! | TATTGGATACTATAAGTTTT+GGG | - | chr4_1:46593604-46593623 | None:intergenic | 20.0% |
| !!! | TTATTGGATACTATAAGTTT+TGG | - | chr4_1:46593605-46593624 | None:intergenic | 20.0% |
| !!! | CATCATACAAATTCTTATTT+GGG | + | chr4_1:46593750-46593769 | Msa0551010:intron | 20.0% |
| !!! | TAATTCAAGTTTTTTTTCCA+TGG | + | chr4_1:46594062-46594081 | Msa0551010:intron | 20.0% |
| !! | AAAACACTGAAATATTTGAT+TGG | + | chr4_1:46594332-46594351 | Msa0551010:CDS | 20.0% |
| !! | AAACACTGAAATATTTGATT+GGG | + | chr4_1:46594333-46594352 | Msa0551010:CDS | 20.0% |
| !!! | TAATTTTGTCTAATTCTTCT+TGG | - | chr4_1:46594366-46594385 | None:intergenic | 20.0% |
| !! | CATGTTCCTTTTATATCAAA+AGG | - | chr4_1:46593371-46593390 | None:intergenic | 25.0% |
| !! | CTTTTGATATAAAAGGAACA+TGG | + | chr4_1:46593369-46593388 | Msa0551010:CDS | 25.0% |
| ! | TATGGAAGATTGTTATAGAT+TGG | + | chr4_1:46593397-46593416 | Msa0551010:CDS | 25.0% |
| ! | ATGGAAGATTGTTATAGATT+GGG | + | chr4_1:46593398-46593417 | Msa0551010:CDS | 25.0% |
| ! | GCATCATACAAATTCTTATT+TGG | + | chr4_1:46593749-46593768 | Msa0551010:intron | 25.0% |
| !! | ACAAATTCTTATTTGGGTTT+AGG | + | chr4_1:46593756-46593775 | Msa0551010:intron | 25.0% |
| ! | AATCTTAATTGGCTAAACAT+AGG | - | chr4_1:46594008-46594027 | None:intergenic | 25.0% |
| ! | TTGTTTCACATAACAATCTA+AGG | - | chr4_1:46594134-46594153 | None:intergenic | 25.0% |
| ! | GAAATGTTTGTATCTGATAA+TGG | + | chr4_1:46594418-46594437 | Msa0551010:CDS | 25.0% |
| !! | CATGTTCCTTTTATATCAAA+AGG | - | chr4_1:46593371-46593390 | None:intergenic | 25.0% |
| !! | CTTTTGATATAAAAGGAACA+TGG | + | chr4_1:46593369-46593388 | Msa0551010:CDS | 25.0% |
| ! | TATGGAAGATTGTTATAGAT+TGG | + | chr4_1:46593397-46593416 | Msa0551010:CDS | 25.0% |
| ! | ATGGAAGATTGTTATAGATT+GGG | + | chr4_1:46593398-46593417 | Msa0551010:CDS | 25.0% |
| ! | GCATCATACAAATTCTTATT+TGG | + | chr4_1:46593749-46593768 | Msa0551010:intron | 25.0% |
| !! | ACAAATTCTTATTTGGGTTT+AGG | + | chr4_1:46593756-46593775 | Msa0551010:intron | 25.0% |
| ! | AATCTTAATTGGCTAAACAT+AGG | - | chr4_1:46594008-46594027 | None:intergenic | 25.0% |
| ! | TTGTTTCACATAACAATCTA+AGG | - | chr4_1:46594134-46594153 | None:intergenic | 25.0% |
| ! | GAAATGTTTGTATCTGATAA+TGG | + | chr4_1:46594418-46594437 | Msa0551010:CDS | 25.0% |
| ! | AATATGCCAATGATAGGTTT+TGG | + | chr4_1:46592892-46592911 | Msa0551010:CDS | 30.0% |
| TATAATACTGAAGAACCTCT+AGG | + | chr4_1:46593012-46593031 | Msa0551010:CDS | 30.0% | |
| TGTTCATTACTTCCAAGTTA+TGG | + | chr4_1:46593088-46593107 | Msa0551010:CDS | 30.0% | |
| TAATCTTGAATTGGAGTATG+TGG | + | chr4_1:46593268-46593287 | Msa0551010:CDS | 30.0% | |
| !! | TATCCTCACCTTTAAAGTTA+TGG | - | chr4_1:46593343-46593362 | None:intergenic | 30.0% |
| ! | ATGTATTTGTGAAGTATCAC+TGG | - | chr4_1:46593656-46593675 | None:intergenic | 30.0% |
| ! | AATTCTTATTTGGGTTTAGG+TGG | + | chr4_1:46593759-46593778 | Msa0551010:intron | 30.0% |
| TAAAATAATCAACTGCACCT+GGG | - | chr4_1:46593956-46593975 | None:intergenic | 30.0% | |
| ATAAAATAATCAACTGCACC+TGG | - | chr4_1:46593957-46593976 | None:intergenic | 30.0% | |
| TAACAGTAATCTCAATACAG+TGG | - | chr4_1:46594199-46594218 | None:intergenic | 30.0% | |
| TTATACAGATAGCACTAAGA+TGG | + | chr4_1:46594251-46594270 | Msa0551010:intron | 30.0% | |
| ! | TTGTTGAAGCTTTTCACAAT+GGG | - | chr4_1:46594298-46594317 | None:intergenic | 30.0% |
| ! | AATATGCCAATGATAGGTTT+TGG | + | chr4_1:46592892-46592911 | Msa0551010:CDS | 30.0% |
| TATAATACTGAAGAACCTCT+AGG | + | chr4_1:46593012-46593031 | Msa0551010:CDS | 30.0% | |
| TGTTCATTACTTCCAAGTTA+TGG | + | chr4_1:46593088-46593107 | Msa0551010:CDS | 30.0% | |
| TAATCTTGAATTGGAGTATG+TGG | + | chr4_1:46593268-46593287 | Msa0551010:CDS | 30.0% | |
| !! | TATCCTCACCTTTAAAGTTA+TGG | - | chr4_1:46593343-46593362 | None:intergenic | 30.0% |
| ! | ATGTATTTGTGAAGTATCAC+TGG | - | chr4_1:46593656-46593675 | None:intergenic | 30.0% |
| ! | AATTCTTATTTGGGTTTAGG+TGG | + | chr4_1:46593759-46593778 | Msa0551010:intron | 30.0% |
| TAAAATAATCAACTGCACCT+GGG | - | chr4_1:46593956-46593975 | None:intergenic | 30.0% | |
| ATAAAATAATCAACTGCACC+TGG | - | chr4_1:46593957-46593976 | None:intergenic | 30.0% | |
| TAACAGTAATCTCAATACAG+TGG | - | chr4_1:46594199-46594218 | None:intergenic | 30.0% | |
| TTATACAGATAGCACTAAGA+TGG | + | chr4_1:46594251-46594270 | Msa0551010:intron | 30.0% | |
| ! | TTGTTGAAGCTTTTCACAAT+GGG | - | chr4_1:46594298-46594317 | None:intergenic | 30.0% |
| CAGAGGTGATACTAAATTCA+GGG | + | chr4_1:46592866-46592885 | Msa0551010:CDS | 35.0% | |
| GGGAAAAATATGCCAATGAT+AGG | + | chr4_1:46592886-46592905 | Msa0551010:CDS | 35.0% | |
| GATGTTCCAAAACCTATCAT+TGG | - | chr4_1:46592901-46592920 | None:intergenic | 35.0% | |
| AATGGCATCAACCAAAATTG+AGG | - | chr4_1:46592956-46592975 | None:intergenic | 35.0% | |
| ! | TTGGTTGATGCCATTGAAAT+AGG | + | chr4_1:46592961-46592980 | Msa0551010:CDS | 35.0% |
| ! | GTTCATCACGATTTTTAACG+AGG | - | chr4_1:46593068-46593087 | None:intergenic | 35.0% |
| AAATTATGCTTGCTTGAGAG+TGG | - | chr4_1:46593157-46593176 | None:intergenic | 35.0% | |
| TGGATCTCTATTTGATTCAC+TGG | + | chr4_1:46593288-46593307 | Msa0551010:CDS | 35.0% | |
| GTTGAAGGCCATAACTTTAA+AGG | + | chr4_1:46593332-46593351 | Msa0551010:CDS | 35.0% | |
| TGACACCAATAGACTTTACT+AGG | - | chr4_1:46593424-46593443 | None:intergenic | 35.0% | |
| ! | ATTAACTGCAGGAGAGATTT+TGG | - | chr4_1:46593489-46593508 | None:intergenic | 35.0% |
| TCATATACCTGATTAACTGC+AGG | - | chr4_1:46593500-46593519 | None:intergenic | 35.0% | |
| CTGCATCAGTTACTTCAAAA+TGG | + | chr4_1:46593547-46593566 | Msa0551010:intron | 35.0% | |
| ! | ACAATCTAAGGTTCATGATG+TGG | - | chr4_1:46594122-46594141 | None:intergenic | 35.0% |
| ! | CTTGTTGAAGCTTTTCACAA+TGG | - | chr4_1:46594299-46594318 | None:intergenic | 35.0% |
| CATTGTGAAAAGCTTCAACA+AGG | + | chr4_1:46594297-46594316 | Msa0551010:CDS | 35.0% | |
| TGAAAAGCTTCAACAAGGAA+AGG | + | chr4_1:46594302-46594321 | Msa0551010:CDS | 35.0% | |
| ! | TAATGGACCTTACAAGTCAT+TGG | + | chr4_1:46594435-46594454 | Msa0551010:CDS | 35.0% |
| CAGAGGTGATACTAAATTCA+GGG | + | chr4_1:46592866-46592885 | Msa0551010:CDS | 35.0% | |
| GGGAAAAATATGCCAATGAT+AGG | + | chr4_1:46592886-46592905 | Msa0551010:CDS | 35.0% | |
| GATGTTCCAAAACCTATCAT+TGG | - | chr4_1:46592901-46592920 | None:intergenic | 35.0% | |
| AATGGCATCAACCAAAATTG+AGG | - | chr4_1:46592956-46592975 | None:intergenic | 35.0% | |
| ! | TTGGTTGATGCCATTGAAAT+AGG | + | chr4_1:46592961-46592980 | Msa0551010:CDS | 35.0% |
| ! | GTTCATCACGATTTTTAACG+AGG | - | chr4_1:46593068-46593087 | None:intergenic | 35.0% |
| AAATTATGCTTGCTTGAGAG+TGG | - | chr4_1:46593157-46593176 | None:intergenic | 35.0% | |
| TGGATCTCTATTTGATTCAC+TGG | + | chr4_1:46593288-46593307 | Msa0551010:CDS | 35.0% | |
| GTTGAAGGCCATAACTTTAA+AGG | + | chr4_1:46593332-46593351 | Msa0551010:CDS | 35.0% | |
| TGACACCAATAGACTTTACT+AGG | - | chr4_1:46593424-46593443 | None:intergenic | 35.0% | |
| ! | ATTAACTGCAGGAGAGATTT+TGG | - | chr4_1:46593489-46593508 | None:intergenic | 35.0% |
| TCATATACCTGATTAACTGC+AGG | - | chr4_1:46593500-46593519 | None:intergenic | 35.0% | |
| CTGCATCAGTTACTTCAAAA+TGG | + | chr4_1:46593547-46593566 | Msa0551010:intron | 35.0% | |
| ! | ACAATCTAAGGTTCATGATG+TGG | - | chr4_1:46594122-46594141 | None:intergenic | 35.0% |
| ! | CTTGTTGAAGCTTTTCACAA+TGG | - | chr4_1:46594299-46594318 | None:intergenic | 35.0% |
| CATTGTGAAAAGCTTCAACA+AGG | + | chr4_1:46594297-46594316 | Msa0551010:CDS | 35.0% | |
| TGAAAAGCTTCAACAAGGAA+AGG | + | chr4_1:46594302-46594321 | Msa0551010:CDS | 35.0% | |
| ! | TAATGGACCTTACAAGTCAT+TGG | + | chr4_1:46594435-46594454 | Msa0551010:CDS | 35.0% |
| GGAAACAAACAAAGTTCCAG+AGG | + | chr4_1:46592849-46592868 | Msa0551010:CDS | 40.0% | |
| CCTGAATTTAGTATCACCTC+TGG | - | chr4_1:46592868-46592887 | None:intergenic | 40.0% | |
| CCAGAGGTGATACTAAATTC+AGG | + | chr4_1:46592865-46592884 | Msa0551010:CDS | 40.0% | |
| ! | TGAAGTCCTCACCTCAATTT+TGG | + | chr4_1:46592942-46592961 | Msa0551010:CDS | 40.0% |
| CATCAACCAAAATTGAGGTG+AGG | - | chr4_1:46592951-46592970 | None:intergenic | 40.0% | |
| ATGCCATTGAAATAGGCTAC+AGG | + | chr4_1:46592968-46592987 | Msa0551010:CDS | 40.0% | |
| ATGCCTGTAGCCTATTTCAA+TGG | - | chr4_1:46592974-46592993 | None:intergenic | 40.0% | |
| ! | CTAAAGCTTTTGACACAGCT+TGG | - | chr4_1:46593038-46593057 | None:intergenic | 40.0% |
| !! | GTGTCAAAAGCTTTAGAGCT+AGG | + | chr4_1:46593042-46593061 | Msa0551010:CDS | 40.0% |
| AGCATCAGTACACCATAACT+TGG | - | chr4_1:46593103-46593122 | None:intergenic | 40.0% | |
| ATTTGATTCACTGGCCAGTA+AGG | + | chr4_1:46593297-46593316 | Msa0551010:CDS | 40.0% | |
| !! | ACGTCTTGTTTCAACCTTAC+TGG | - | chr4_1:46593314-46593333 | None:intergenic | 40.0% |
| AGGTTGAAACAAGACGTTGA+AGG | + | chr4_1:46593317-46593336 | Msa0551010:CDS | 40.0% | |
| ! | AGGCCATAACTTTAAAGGTG+AGG | + | chr4_1:46593337-46593356 | Msa0551010:CDS | 40.0% |
| AAAAGGAACATGGGAAGCTA+TGG | + | chr4_1:46593379-46593398 | Msa0551010:CDS | 40.0% | |
| TTGGGCCTAGTAAAGTCTAT+TGG | + | chr4_1:46593416-46593435 | Msa0551010:CDS | 40.0% | |
| !! | TCTATTGGTGTCAGCAACTT+TGG | + | chr4_1:46593431-46593450 | Msa0551010:CDS | 40.0% |
| CAAAAAGCTCTCCATACTCT+TGG | + | chr4_1:46593457-46593476 | Msa0551010:CDS | 40.0% | |
| TTTGGCACTTTCCAAGAGTA+TGG | - | chr4_1:46593471-46593490 | None:intergenic | 40.0% | |
| AATCTCTCCTGCAGTTAATC+AGG | + | chr4_1:46593490-46593509 | Msa0551010:CDS | 40.0% | |
| !! | TTTGGGAAGTATCTGACGAT+AGG | - | chr4_1:46593587-46593606 | None:intergenic | 40.0% |
| AGAGAATTCTGCAAGCAGAA+AGG | + | chr4_1:46593814-46593833 | Msa0551010:CDS | 40.0% | |
| ! | TAGGAGGGTACAAACTAAGT+TGG | + | chr4_1:46593863-46593882 | Msa0551010:CDS | 40.0% |
| ! | AGGAGGGTACAAACTAAGTT+GGG | + | chr4_1:46593864-46593883 | Msa0551010:CDS | 40.0% |
| ! | CCAAGTCTAAAGTTTGACCA+TGG | - | chr4_1:46594082-46594101 | None:intergenic | 40.0% |
| CCATGGTCAAACTTTAGACT+TGG | + | chr4_1:46594079-46594098 | Msa0551010:intron | 40.0% | |
| TAAGATGGATATGCCAGCAA+GGG | + | chr4_1:46594266-46594285 | Msa0551010:CDS | 40.0% | |
| ! | AGCTCTTCCAATGACTTGTA+AGG | - | chr4_1:46594445-46594464 | None:intergenic | 40.0% |
| GGAAACAAACAAAGTTCCAG+AGG | + | chr4_1:46592849-46592868 | Msa0551010:CDS | 40.0% | |
| CCTGAATTTAGTATCACCTC+TGG | - | chr4_1:46592868-46592887 | None:intergenic | 40.0% | |
| CCAGAGGTGATACTAAATTC+AGG | + | chr4_1:46592865-46592884 | Msa0551010:CDS | 40.0% | |
| ! | TGAAGTCCTCACCTCAATTT+TGG | + | chr4_1:46592942-46592961 | Msa0551010:CDS | 40.0% |
| CATCAACCAAAATTGAGGTG+AGG | - | chr4_1:46592951-46592970 | None:intergenic | 40.0% | |
| ATGCCATTGAAATAGGCTAC+AGG | + | chr4_1:46592968-46592987 | Msa0551010:CDS | 40.0% | |
| ATGCCTGTAGCCTATTTCAA+TGG | - | chr4_1:46592974-46592993 | None:intergenic | 40.0% | |
| ! | CTAAAGCTTTTGACACAGCT+TGG | - | chr4_1:46593038-46593057 | None:intergenic | 40.0% |
| !! | GTGTCAAAAGCTTTAGAGCT+AGG | + | chr4_1:46593042-46593061 | Msa0551010:CDS | 40.0% |
| AGCATCAGTACACCATAACT+TGG | - | chr4_1:46593103-46593122 | None:intergenic | 40.0% | |
| ATTTGATTCACTGGCCAGTA+AGG | + | chr4_1:46593297-46593316 | Msa0551010:CDS | 40.0% | |
| !! | ACGTCTTGTTTCAACCTTAC+TGG | - | chr4_1:46593314-46593333 | None:intergenic | 40.0% |
| AGGTTGAAACAAGACGTTGA+AGG | + | chr4_1:46593317-46593336 | Msa0551010:CDS | 40.0% | |
| ! | AGGCCATAACTTTAAAGGTG+AGG | + | chr4_1:46593337-46593356 | Msa0551010:CDS | 40.0% |
| AAAAGGAACATGGGAAGCTA+TGG | + | chr4_1:46593379-46593398 | Msa0551010:CDS | 40.0% | |
| TTGGGCCTAGTAAAGTCTAT+TGG | + | chr4_1:46593416-46593435 | Msa0551010:CDS | 40.0% | |
| !! | TCTATTGGTGTCAGCAACTT+TGG | + | chr4_1:46593431-46593450 | Msa0551010:CDS | 40.0% |
| CAAAAAGCTCTCCATACTCT+TGG | + | chr4_1:46593457-46593476 | Msa0551010:CDS | 40.0% | |
| TTTGGCACTTTCCAAGAGTA+TGG | - | chr4_1:46593471-46593490 | None:intergenic | 40.0% | |
| AATCTCTCCTGCAGTTAATC+AGG | + | chr4_1:46593490-46593509 | Msa0551010:CDS | 40.0% | |
| !! | TTTGGGAAGTATCTGACGAT+AGG | - | chr4_1:46593587-46593606 | None:intergenic | 40.0% |
| AGAGAATTCTGCAAGCAGAA+AGG | + | chr4_1:46593814-46593833 | Msa0551010:CDS | 40.0% | |
| ! | TAGGAGGGTACAAACTAAGT+TGG | + | chr4_1:46593863-46593882 | Msa0551010:CDS | 40.0% |
| ! | AGGAGGGTACAAACTAAGTT+GGG | + | chr4_1:46593864-46593883 | Msa0551010:CDS | 40.0% |
| ! | CCAAGTCTAAAGTTTGACCA+TGG | - | chr4_1:46594082-46594101 | None:intergenic | 40.0% |
| CCATGGTCAAACTTTAGACT+TGG | + | chr4_1:46594079-46594098 | Msa0551010:intron | 40.0% | |
| TAAGATGGATATGCCAGCAA+GGG | + | chr4_1:46594266-46594285 | Msa0551010:CDS | 40.0% | |
| ! | AGCTCTTCCAATGACTTGTA+AGG | - | chr4_1:46594445-46594464 | None:intergenic | 40.0% |
| ATTGAGGTGAGGACTTCATG+TGG | - | chr4_1:46592940-46592959 | None:intergenic | 45.0% | |
| !! | TTTTGAGAGCTGGGAGAACA+AGG | - | chr4_1:46593134-46593153 | None:intergenic | 45.0% |
| !!! | TGAGAGTGGTTTTGAGAGCT+GGG | - | chr4_1:46593143-46593162 | None:intergenic | 45.0% |
| !!! | TTGAGAGTGGTTTTGAGAGC+TGG | - | chr4_1:46593144-46593163 | None:intergenic | 45.0% |
| ATGACAACTGCGTGCTTAGT+TGG | - | chr4_1:46593695-46593714 | None:intergenic | 45.0% | |
| AGGTGGAAATGAACCCATCA+TGG | + | chr4_1:46593776-46593795 | Msa0551010:intron | 45.0% | |
| GTTTCCTCTGATGCCATGAT+GGG | - | chr4_1:46593792-46593811 | None:intergenic | 45.0% | |
| AGTTTCCTCTGATGCCATGA+TGG | - | chr4_1:46593793-46593812 | None:intergenic | 45.0% | |
| AAGGAATCCATGTGAGTGCA+TGG | + | chr4_1:46593833-46593852 | Msa0551010:CDS | 45.0% | |
| !! | CTTAGTTTGTACCCTCCTAG+TGG | - | chr4_1:46593862-46593881 | None:intergenic | 45.0% |
| ! | GGAGGGTACAAACTAAGTTG+GGG | + | chr4_1:46593865-46593884 | Msa0551010:CDS | 45.0% |
| ATCGAATTCTCCATCACTGC+AGG | - | chr4_1:46593895-46593914 | None:intergenic | 45.0% | |
| GATTCTGCGCAAAATTGCTG+AGG | + | chr4_1:46593912-46593931 | Msa0551010:CDS | 45.0% | |
| ! | TAGAAACAAGAGTGTAGCCC+AGG | + | chr4_1:46593936-46593955 | Msa0551010:CDS | 45.0% |
| CTAAGATGGATATGCCAGCA+AGG | + | chr4_1:46594265-46594284 | Msa0551010:CDS | 45.0% | |
| AAGATGGATATGCCAGCAAG+GGG | + | chr4_1:46594267-46594286 | Msa0551010:CDS | 45.0% | |
| TCCTCAATGCAGACTGCTAA+AGG | + | chr4_1:46594393-46594412 | Msa0551010:CDS | 45.0% | |
| ACAAGTCATTGGAAGAGCTG+TGG | + | chr4_1:46594446-46594465 | Msa0551010:CDS | 45.0% | |
| CAAGTCATTGGAAGAGCTGT+GGG | + | chr4_1:46594447-46594466 | Msa0551010:CDS | 45.0% | |
| ATTGAGGTGAGGACTTCATG+TGG | - | chr4_1:46592940-46592959 | None:intergenic | 45.0% | |
| !! | TTTTGAGAGCTGGGAGAACA+AGG | - | chr4_1:46593134-46593153 | None:intergenic | 45.0% |
| !!! | TGAGAGTGGTTTTGAGAGCT+GGG | - | chr4_1:46593143-46593162 | None:intergenic | 45.0% |
| !!! | TTGAGAGTGGTTTTGAGAGC+TGG | - | chr4_1:46593144-46593163 | None:intergenic | 45.0% |
| ATGACAACTGCGTGCTTAGT+TGG | - | chr4_1:46593695-46593714 | None:intergenic | 45.0% | |
| AGGTGGAAATGAACCCATCA+TGG | + | chr4_1:46593776-46593795 | Msa0551010:intron | 45.0% | |
| GTTTCCTCTGATGCCATGAT+GGG | - | chr4_1:46593792-46593811 | None:intergenic | 45.0% | |
| AGTTTCCTCTGATGCCATGA+TGG | - | chr4_1:46593793-46593812 | None:intergenic | 45.0% | |
| AAGGAATCCATGTGAGTGCA+TGG | + | chr4_1:46593833-46593852 | Msa0551010:CDS | 45.0% | |
| !! | CTTAGTTTGTACCCTCCTAG+TGG | - | chr4_1:46593862-46593881 | None:intergenic | 45.0% |
| ! | GGAGGGTACAAACTAAGTTG+GGG | + | chr4_1:46593865-46593884 | Msa0551010:CDS | 45.0% |
| ATCGAATTCTCCATCACTGC+AGG | - | chr4_1:46593895-46593914 | None:intergenic | 45.0% | |
| GATTCTGCGCAAAATTGCTG+AGG | + | chr4_1:46593912-46593931 | Msa0551010:CDS | 45.0% | |
| ! | TAGAAACAAGAGTGTAGCCC+AGG | + | chr4_1:46593936-46593955 | Msa0551010:CDS | 45.0% |
| CTAAGATGGATATGCCAGCA+AGG | + | chr4_1:46594265-46594284 | Msa0551010:CDS | 45.0% | |
| AAGATGGATATGCCAGCAAG+GGG | + | chr4_1:46594267-46594286 | Msa0551010:CDS | 45.0% | |
| TCCTCAATGCAGACTGCTAA+AGG | + | chr4_1:46594393-46594412 | Msa0551010:CDS | 45.0% | |
| ACAAGTCATTGGAAGAGCTG+TGG | + | chr4_1:46594446-46594465 | Msa0551010:CDS | 45.0% | |
| CAAGTCATTGGAAGAGCTGT+GGG | + | chr4_1:46594447-46594466 | Msa0551010:CDS | 45.0% | |
| !! | AAAGAATTAAAATAAATTAT+TGG | - | chr4_1:46593621-46593640 | None:intergenic | 5.0% |
| !!! | ATAATTTATTTTAATTCTTT+TGG | + | chr4_1:46593621-46593640 | Msa0551010:intron | 5.0% |
| !! | AAAGAATTAAAATAAATTAT+TGG | - | chr4_1:46593621-46593640 | None:intergenic | 5.0% |
| !!! | ATAATTTATTTTAATTCTTT+TGG | + | chr4_1:46593621-46593640 | Msa0551010:intron | 5.0% |
| ! | AGGACTTCATGTGGTGGAGA+GGG | - | chr4_1:46592931-46592950 | None:intergenic | 50.0% |
| TTTGACACAGCTTGGCCTAG+AGG | - | chr4_1:46593030-46593049 | None:intergenic | 50.0% | |
| TGAACCCATCATGGCATCAG+AGG | + | chr4_1:46593785-46593804 | Msa0551010:CDS | 50.0% | |
| GCCTTTAGCAGTCTGCATTG+AGG | - | chr4_1:46594397-46594416 | None:intergenic | 50.0% | |
| TCATTGGAAGAGCTGTGGGA+TGG | + | chr4_1:46594451-46594470 | Msa0551010:CDS | 50.0% | |
| ! | AGGACTTCATGTGGTGGAGA+GGG | - | chr4_1:46592931-46592950 | None:intergenic | 50.0% |
| TTTGACACAGCTTGGCCTAG+AGG | - | chr4_1:46593030-46593049 | None:intergenic | 50.0% | |
| TGAACCCATCATGGCATCAG+AGG | + | chr4_1:46593785-46593804 | Msa0551010:CDS | 50.0% | |
| GCCTTTAGCAGTCTGCATTG+AGG | - | chr4_1:46594397-46594416 | None:intergenic | 50.0% | |
| TCATTGGAAGAGCTGTGGGA+TGG | + | chr4_1:46594451-46594470 | Msa0551010:CDS | 50.0% | |
| ! | GAGGACTTCATGTGGTGGAG+AGG | - | chr4_1:46592932-46592951 | None:intergenic | 55.0% |
| GAGGTGAGGACTTCATGTGG+TGG | - | chr4_1:46592937-46592956 | None:intergenic | 55.0% | |
| GTGGTGACCATGCACTCACA+TGG | - | chr4_1:46593843-46593862 | None:intergenic | 55.0% | |
| GTGAGTGCATGGTCACCACT+AGG | + | chr4_1:46593844-46593863 | Msa0551010:CDS | 55.0% | |
| AGTGCATGGTCACCACTAGG+AGG | + | chr4_1:46593847-46593866 | Msa0551010:CDS | 55.0% | |
| GTGCATGGTCACCACTAGGA+GGG | + | chr4_1:46593848-46593867 | Msa0551010:CDS | 55.0% | |
| CAATGGGAATTGCCCCTTGC+TGG | - | chr4_1:46594282-46594301 | None:intergenic | 55.0% | |
| ! | GAGGACTTCATGTGGTGGAG+AGG | - | chr4_1:46592932-46592951 | None:intergenic | 55.0% |
| GAGGTGAGGACTTCATGTGG+TGG | - | chr4_1:46592937-46592956 | None:intergenic | 55.0% | |
| GTGGTGACCATGCACTCACA+TGG | - | chr4_1:46593843-46593862 | None:intergenic | 55.0% | |
| GTGAGTGCATGGTCACCACT+AGG | + | chr4_1:46593844-46593863 | Msa0551010:CDS | 55.0% | |
| AGTGCATGGTCACCACTAGG+AGG | + | chr4_1:46593847-46593866 | Msa0551010:CDS | 55.0% | |
| GTGCATGGTCACCACTAGGA+GGG | + | chr4_1:46593848-46593867 | Msa0551010:CDS | 55.0% | |
| CAATGGGAATTGCCCCTTGC+TGG | - | chr4_1:46594282-46594301 | None:intergenic | 55.0% | |
| TTGGGGTTCGCCTGCAGTGA+TGG | + | chr4_1:46593882-46593901 | Msa0551010:CDS | 60.0% | |
| TTGGGGTTCGCCTGCAGTGA+TGG | + | chr4_1:46593882-46593901 | Msa0551010:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 46592847 | 46594483 | 46592847 | ID=Msa0551010;Name=Msa0551010 |
| chr4_1 | mRNA | 46592847 | 46594483 | 46592847 | ID=Msa0551010-mRNA-1;Parent=Msa0551010;Name=Msa0551010-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0|0|1|1|1|4|0|321 |
| chr4_1 | exon | 46592847 | 46593163 | 46592847 | ID=Msa0551010-mRNA-1:exon:12629;Parent=Msa0551010-mRNA-1 |
| chr4_1 | exon | 46593268 | 46593511 | 46593268 | ID=Msa0551010-mRNA-1:exon:12630;Parent=Msa0551010-mRNA-1 |
| chr4_1 | exon | 46593778 | 46593957 | 46593778 | ID=Msa0551010-mRNA-1:exon:12631;Parent=Msa0551010-mRNA-1 |
| chr4_1 | exon | 46594259 | 46594483 | 46594259 | ID=Msa0551010-mRNA-1:exon:12632;Parent=Msa0551010-mRNA-1 |
| chr4_1 | CDS | 46592847 | 46593163 | 46592847 | ID=Msa0551010-mRNA-1:cds;Parent=Msa0551010-mRNA-1 |
| chr4_1 | CDS | 46593268 | 46593511 | 46593268 | ID=Msa0551010-mRNA-1:cds;Parent=Msa0551010-mRNA-1 |
| chr4_1 | CDS | 46593778 | 46593957 | 46593778 | ID=Msa0551010-mRNA-1:cds;Parent=Msa0551010-mRNA-1 |
| chr4_1 | CDS | 46594259 | 46594483 | 46594259 | ID=Msa0551010-mRNA-1:cds;Parent=Msa0551010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
