Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0551480 | MCH98304.1 | 96.330 | 109 | 4 | 0 | 130 | 238 | 37 | 145 | 2.72e-67 | 217 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0551480 | sp|Q9M2S6|SDIR1_ARATH | 88.991 | 109 | 11 | 1 | 130 | 238 | 64 | 171 | 3.08e-49 | 167 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0551480 | A0A392NIK1 | 96.330 | 109 | 4 | 0 | 130 | 238 | 37 | 145 | 1.30e-67 | 217 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0551290 | Msa0551480 | 0.970252 | 2.460031e-131 | -8.615850e-47 |
| Msa0551370 | Msa0551480 | 0.816821 | 4.538852e-52 | -8.615850e-47 |
| Msa0551440 | Msa0551480 | 0.957360 | 3.278613e-115 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0551480 | MtrunA17_Chr3g0112041 | 80.282 | 142 | 25 | 1 | 130 | 268 | 63 | 204 | 2.35e-58 | 188 |
| Msa0551480 | MtrunA17_Chr4g0031921 | 65.741 | 108 | 33 | 1 | 131 | 238 | 64 | 167 | 1.51e-36 | 131 |
| Msa0551480 | MtrunA17_Chr4g0031911 | 63.889 | 108 | 35 | 1 | 131 | 238 | 64 | 167 | 2.52e-34 | 125 |
| Msa0551480 | MtrunA17_Chr4g0037021 | 82.353 | 68 | 12 | 0 | 226 | 293 | 130 | 197 | 4.52e-31 | 115 |
| Msa0551480 | MtrunA17_Chr6g0486041 | 68.421 | 57 | 15 | 1 | 238 | 291 | 142 | 198 | 5.28e-17 | 77.8 |
| Msa0551480 | MtrunA17_Chr3g0117931 | 58.333 | 60 | 24 | 1 | 232 | 290 | 138 | 197 | 7.61e-16 | 74.7 |
| Msa0551480 | MtrunA17_Chr8g0371501 | 74.603 | 63 | 16 | 0 | 231 | 293 | 135 | 197 | 3.08e-15 | 72.8 |
| Msa0551480 | MtrunA17_Chr5g0405791 | 74.603 | 63 | 16 | 0 | 231 | 293 | 135 | 197 | 3.65e-15 | 72.4 |
| Msa0551480 | MtrunA17_Chr2g0325101 | 68.182 | 44 | 14 | 0 | 231 | 274 | 135 | 178 | 3.32e-12 | 64.3 |
| Msa0551480 | MtrunA17_Chr4g0046221 | 72.973 | 37 | 10 | 0 | 238 | 274 | 10 | 46 | 4.49e-12 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0551480 | AT3G55530.1 | 88.991 | 109 | 11 | 1 | 130 | 238 | 64 | 171 | 3.14e-50 | 167 |
| Msa0551480 | AT4G35020.1 | 70.588 | 68 | 19 | 1 | 227 | 293 | 131 | 198 | 3.81e-18 | 81.3 |
| Msa0551480 | AT4G35020.2 | 70.588 | 68 | 19 | 1 | 227 | 293 | 131 | 198 | 3.81e-18 | 81.3 |
| Msa0551480 | AT4G35020.3 | 70.588 | 68 | 19 | 1 | 227 | 293 | 131 | 198 | 3.81e-18 | 81.3 |
| Msa0551480 | AT4G28950.1 | 66.102 | 59 | 16 | 1 | 238 | 292 | 140 | 198 | 1.04e-16 | 77.4 |
| Msa0551480 | AT3G51300.1 | 76.190 | 63 | 15 | 0 | 231 | 293 | 135 | 197 | 1.20e-15 | 74.3 |
| Msa0551480 | AT2G17800.2 | 74.603 | 63 | 16 | 0 | 231 | 293 | 135 | 197 | 1.78e-15 | 73.9 |
| Msa0551480 | AT2G17800.1 | 74.603 | 63 | 16 | 0 | 231 | 293 | 135 | 197 | 1.78e-15 | 73.9 |
| Msa0551480 | AT1G75840.1 | 75.000 | 44 | 11 | 0 | 231 | 274 | 135 | 178 | 1.91e-15 | 73.6 |
| Msa0551480 | AT4G35950.1 | 73.016 | 63 | 17 | 0 | 231 | 293 | 135 | 197 | 4.79e-15 | 72.8 |
| Msa0551480 | AT3G51290.2 | 76.190 | 63 | 15 | 0 | 231 | 293 | 736 | 798 | 1.13e-14 | 74.7 |
| Msa0551480 | AT1G20090.1 | 75.000 | 44 | 11 | 0 | 231 | 274 | 134 | 177 | 1.73e-14 | 70.9 |
| Msa0551480 | AT5G62880.1 | 77.273 | 44 | 10 | 0 | 233 | 276 | 139 | 182 | 3.16e-14 | 70.9 |
| Msa0551480 | AT2G44690.1 | 60.714 | 56 | 22 | 0 | 238 | 293 | 154 | 209 | 5.67e-14 | 69.7 |
| Msa0551480 | AT3G48040.1 | 75.000 | 44 | 11 | 0 | 233 | 276 | 139 | 182 | 7.66e-14 | 69.3 |
| Msa0551480 | AT5G45970.1 | 64.444 | 45 | 16 | 0 | 231 | 275 | 135 | 179 | 2.80e-11 | 62.0 |
Find 152 sgRNAs with CRISPR-Local
Find 786 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTATTTGCAGTAATGTTTA+AGG | 0.184795 | 4_1:-47449466 | Msa0551480:intron |
| CACCTGAAGCTTTGTGTTAT+TGG | 0.187053 | 4_1:-47447931 | Msa0551480:CDS |
| GCAGCAGCCAGTGGCCTTCT+TGG | 0.225465 | 4_1:-47445774 | Msa0551480:CDS |
| GCAGCAGCCAGTGGCCTTCT+TGG | 0.225465 | 4_1:-47454150 | Msa0551480:five_prime_UTR |
| GGCTGCTGCTGCATGAGCTT+GGG | 0.225768 | 4_1:+47445788 | None:intergenic |
| GGCTGCTGCTGCATGAGCTT+GGG | 0.225768 | 4_1:+47454164 | None:intergenic |
| TGGCTGCTGCTGCATGAGCT+TGG | 0.233454 | 4_1:+47445787 | None:intergenic |
| TGGCTGCTGCTGCATGAGCT+TGG | 0.233454 | 4_1:+47454163 | None:intergenic |
| AATAAACACTTGAAAGAAAT+TGG | 0.242653 | 4_1:+47443294 | None:intergenic |
| GTCCACAAATACAAGGTTTC+TGG | 0.243519 | 4_1:-47453783 | Msa0551480:five_prime_UTR |
| GATGATGAAGAGAGGTATAT+TGG | 0.265764 | 4_1:+47448398 | Msa0551490:intron |
| TCACATTGTAATCTAATCTT+AGG | 0.297634 | 4_1:-47443426 | Msa0551480:three_prime_UTR |
| ACCTGAAGCTTTGTGTTATT+GGG | 0.304249 | 4_1:-47447930 | Msa0551480:CDS |
| GCAGGGATATTGTTTGTATC+AGG | 0.319656 | 4_1:-47455375 | Msa0551480:intron |
| GTCCTTCGTATTGTAGTTCA+TGG | 0.324012 | 4_1:-47443724 | Msa0551480:three_prime_UTR |
| GCAGAGATGTTGTTTGTATC+AGG | 0.328863 | 4_1:-47455045 | Msa0551480:intron |
| CCAACCTGAGAGCCACAAAT+TGG | 0.336491 | 4_1:+47446295 | None:intergenic |
| TTAACAACCTGAATATAGTT+TGG | 0.340163 | 4_1:-47443338 | Msa0551480:three_prime_UTR |
| ATATAGTTTGGTTTGTTCAT+TGG | 0.348235 | 4_1:-47443326 | Msa0551480:three_prime_UTR |
| AGTCATAATTTCAACATGTT+TGG | 0.352448 | 4_1:-47443536 | Msa0551480:three_prime_UTR |
| GCTTGCAACTTATGCGGCTT+TGG | 0.360502 | 4_1:-47443399 | Msa0551480:three_prime_UTR |
| TTATGAAACTTTAAGAGCTC+TGG | 0.370204 | 4_1:-47445469 | Msa0551480:CDS |
| AACCTGATCTCCACGTGAAC+TGG | 0.374453 | 4_1:+47448351 | Msa0551490:intron |
| GAACTGCATTCAATGTAAAC+TGG | 0.374474 | 4_1:+47443954 | None:intergenic |
| AGCTCCAATTTGTGGCTCTC+AGG | 0.380013 | 4_1:-47446299 | Msa0551480:intron |
| TGGATCGAGGGACACGATGC+TGG | 0.383038 | 4_1:-47455558 | Msa0551480:five_prime_UTR |
| TGCAAGCCGAGGGCGTCTGC+AGG | 0.384276 | 4_1:-47445709 | Msa0551480:CDS |
| TCCCAATAACACAAAGCTTC+AGG | 0.395808 | 4_1:+47447929 | Msa0551490:CDS |
| GGATCGAGGGGACACATTGC+AGG | 0.398473 | 4_1:-47455393 | Msa0551480:five_prime_UTR |
| ATATGAAGCTTTAAGAGCTC+TGG | 0.403060 | 4_1:-47453865 | Msa0551480:five_prime_UTR |
| AAGGACTGAAGATCACAAAA+TGG | 0.407443 | 4_1:+47443741 | None:intergenic |
| GTACAACTATTGTGTTTCTC+TGG | 0.415292 | 4_1:-47443510 | Msa0551480:three_prime_UTR |
| TGCTTGGCTGACATCATCAT+GGG | 0.416444 | 4_1:+47447848 | Msa0551490:CDS |
| TAACTAAGCCAACTGAACTT+TGG | 0.417976 | 4_1:+47443244 | None:intergenic |
| TTCCAGTTCACGTGGAGATC+AGG | 0.419396 | 4_1:-47448353 | Msa0551480:intron |
| ACATGACAGTAGCCATTTCC+TGG | 0.419708 | 4_1:-47443695 | Msa0551480:three_prime_UTR |
| TGCTGTACAGGTTAGGTTGT+TGG | 0.423397 | 4_1:-47446732 | Msa0551480:intron |
| TGGATCGTGGGACACGATGC+AGG | 0.424618 | 4_1:-47455872 | Msa0551480:five_prime_UTR |
| GTTTGATGGCACTTCTTGAT+CGG | 0.430931 | 4_1:-47454071 | Msa0551480:five_prime_UTR |
| TGCAAGCCGAGGGCGTTTGA+TGG | 0.431145 | 4_1:-47454085 | Msa0551480:five_prime_UTR |
| AATCATTTGCAGTAGTCATA+AGG | 0.432289 | 4_1:+47443207 | None:intergenic |
| TTTGATGGCACTTCTTGATC+GGG | 0.435423 | 4_1:-47454070 | Msa0551480:five_prime_UTR |
| ATGATGAAGAGAGGTATATT+GGG | 0.435793 | 4_1:+47448399 | Msa0551490:intron |
| GAACAAACCAAACTATATTC+AGG | 0.437094 | 4_1:+47443331 | None:intergenic |
| ATCTCTTCCTCGGACATAGA+AGG | 0.438219 | 4_1:+47445423 | None:intergenic |
| ATCTCTTCCTCGGACATAGA+AGG | 0.438219 | 4_1:+47453819 | None:intergenic |
| AACAAAGAGAAAGGGGCAAA+AGG | 0.438650 | 4_1:-47443770 | Msa0551480:CDS |
| CAAAAGAAAACAAAGAGAAA+GGG | 0.440459 | 4_1:-47443778 | Msa0551480:CDS |
| GCAGGGGTGTTGTATGAATC+AGG | 0.443379 | 4_1:-47455854 | Msa0551480:intron |
| AACTTTAAGAGCTCTGGATT+CGG | 0.443410 | 4_1:-47445463 | Msa0551480:CDS |
| GCAAAAGAAAACAAAGAGAA+AGG | 0.444377 | 4_1:-47443779 | Msa0551480:CDS |
| TTCAGCTGGCACTTCTTGAT+CGG | 0.445031 | 4_1:-47445677 | Msa0551480:CDS |
| TTTATAATCCAAAGTTCAGT+TGG | 0.447690 | 4_1:-47443252 | Msa0551480:three_prime_UTR |
| GTCATCTCCATTTGTGGACA+TGG | 0.452703 | 4_1:-47443456 | Msa0551480:three_prime_UTR |
| AGGTACCCTTGTACCTTGCT+TGG | 0.453384 | 4_1:+47447832 | Msa0551490:CDS |
| TCAGAAGGTCCAAGTTGTAT+TGG | 0.453698 | 4_1:-47446707 | Msa0551480:CDS |
| CAAATGGTCATCTCCATTTG+TGG | 0.458996 | 4_1:-47443462 | Msa0551480:three_prime_UTR |
| TAGATCTCGGGACACGATGC+AGG | 0.459494 | 4_1:-47455223 | Msa0551480:five_prime_UTR |
| GCTGGGGTGCTGTATGTATC+AGG | 0.461632 | 4_1:-47455540 | Msa0551480:intron |
| TCAGCTGGCACTTCTTGATC+GGG | 0.463787 | 4_1:-47445676 | Msa0551480:CDS |
| AGCTTTAAGAGCTCTGGATT+CGG | 0.464209 | 4_1:-47453859 | Msa0551480:five_prime_UTR |
| AACATCAAGCTATTTGTCTC+TGG | 0.464278 | 4_1:-47443577 | Msa0551480:three_prime_UTR |
| GACCAGAAACCTTGTATTTG+TGG | 0.466017 | 4_1:+47445385 | None:intergenic |
| GACCAGAAACCTTGTATTTG+TGG | 0.466017 | 4_1:+47453781 | None:intergenic |
| GGATCGAGGGACACGATGCT+GGG | 0.471669 | 4_1:-47455557 | Msa0551480:five_prime_UTR |
| TTGCTTGGCTGACATCATCA+TGG | 0.474830 | 4_1:+47447847 | Msa0551490:CDS |
| TGTGGAGTATAGATGTCTTT+CGG | 0.476872 | 4_1:-47446332 | Msa0551480:CDS |
| GATCGGGAGTTTGATGATCT+AGG | 0.485183 | 4_1:-47445660 | Msa0551480:intron |
| GATCGGGAGTTTGATGATCT+AGG | 0.485183 | 4_1:-47454054 | Msa0551480:five_prime_UTR |
| TGAAGATCACAAAATGGAAC+AGG | 0.487806 | 4_1:+47443747 | None:intergenic |
| TTGCAGCTCTGGCTAGTGCT+TGG | 0.489119 | 4_1:-47454249 | Msa0551480:intron |
| GCAGGGTCTCAGACTTCAGC+TGG | 0.489685 | 4_1:-47445691 | Msa0551480:CDS |
| GTATATGTAATTAATTATGT+TGG | 0.498625 | 4_1:-47443365 | Msa0551480:three_prime_UTR |
| GTAAAACCCATGTCCACAAA+TGG | 0.499593 | 4_1:+47443449 | None:intergenic |
| GAGGAACTGAGAAAACTTAT+CGG | 0.501231 | 4_1:-47443981 | Msa0551480:CDS |
| AGCATTCACAAAAGCATGGT+TGG | 0.506208 | 4_1:+47448429 | Msa0551490:intron |
| TTCTATGTCCGAGGAAGAGA+TGG | 0.511745 | 4_1:-47445421 | Msa0551480:CDS |
| TCTTGATGGCTACAATGCTA+AGG | 0.511885 | 4_1:-47445845 | Msa0551480:CDS |
| TCTTGATGGCTACAATGCTA+AGG | 0.511885 | 4_1:-47454221 | Msa0551480:five_prime_UTR |
| TGGCTGTAGAACTACCTTGA+TGG | 0.522363 | 4_1:+47443807 | None:intergenic |
| GAAACCTTGTATTTGTGGAC+AGG | 0.524408 | 4_1:+47445390 | None:intergenic |
| GAAACCTTGTATTTGTGGAC+AGG | 0.524408 | 4_1:+47453786 | None:intergenic |
| TGCCTCTTCAAATTCTTGAA+CGG | 0.528612 | 4_1:-47447955 | Msa0551480:CDS |
| GCTCATGCAGCAGCAGCCAG+TGG | 0.529345 | 4_1:-47445783 | Msa0551480:CDS |
| GCTCATGCAGCAGCAGCCAG+TGG | 0.529345 | 4_1:-47454159 | Msa0551480:five_prime_UTR |
| TGAGACCCTGCAGACGCCCT+CGG | 0.529448 | 4_1:+47445703 | None:intergenic |
| CAAGCTTTAACGCGGTCAGT+TGG | 0.532328 | 4_1:+47443607 | None:intergenic |
| TGTGTGGCCAAGAAGGCCAC+TGG | 0.533669 | 4_1:+47445767 | None:intergenic |
| TGTGTGGCCAAGAAGGCCAC+TGG | 0.533669 | 4_1:+47454143 | None:intergenic |
| TGTCAGCCAAGCAAGGTACA+AGG | 0.535950 | 4_1:-47447838 | Msa0551480:CDS |
| TCATCTCCATTTGTGGACAT+GGG | 0.536199 | 4_1:-47443455 | Msa0551480:three_prime_UTR |
| GGATCGTGGGACACGATGCA+GGG | 0.539319 | 4_1:-47455871 | Msa0551480:five_prime_UTR |
| ATGCAGTTCCAAAACACAAA+AGG | 0.539727 | 4_1:-47443940 | Msa0551480:intron |
| ACATGGCGGTTCCTCCATCT+AGG | 0.541209 | 4_1:+47443630 | None:intergenic |
| AAGAGCATCCATCTCTTCCT+CGG | 0.545305 | 4_1:+47445413 | None:intergenic |
| TCTTCCTGTCCACAAATACA+AGG | 0.550485 | 4_1:-47445394 | Msa0551480:intron |
| CATTTGATAATCAATACAAA+AGG | 0.558185 | 4_1:+47443479 | None:intergenic |
| AGCTATTTGTCTCTGGCTGA+AGG | 0.559006 | 4_1:-47443570 | Msa0551480:three_prime_UTR |
| TTCTTGGCCACACAGAACTA+CGG | 0.560332 | 4_1:-47445758 | Msa0551480:CDS |
| TTCTTGGCCACACAGAACTA+CGG | 0.560332 | 4_1:-47454134 | Msa0551480:five_prime_UTR |
| ATACCGACTCCAATACAACT+TGG | 0.561637 | 4_1:+47446698 | None:intergenic |
| TATAAGATATATAATCAGAA+TGG | 0.561705 | 4_1:+47443663 | None:intergenic |
| GCAAGCCGAGGGCGTCTGCA+GGG | 0.564406 | 4_1:-47445708 | Msa0551480:CDS |
| TTGTCGTGCATAATCGCAGA+TGG | 0.566080 | 4_1:+47449506 | Msa0551490:intron |
| GATCGAGGGGACACATTGCA+GGG | 0.567110 | 4_1:-47455392 | Msa0551480:five_prime_UTR |
| TTAACGCGGTCAGTTGGACA+TGG | 0.567380 | 4_1:+47443613 | None:intergenic |
| CGATAGCACTTGCAAGCCGA+GGG | 0.567822 | 4_1:-47445719 | Msa0551480:CDS |
| CGATAGCACTTGCAAGCCGA+GGG | 0.567822 | 4_1:-47454095 | Msa0551480:five_prime_UTR |
| TCGATAGCACTTGCAAGCCG+AGG | 0.569823 | 4_1:-47445720 | Msa0551480:CDS |
| TCGATAGCACTTGCAAGCCG+AGG | 0.569823 | 4_1:-47454096 | Msa0551480:five_prime_UTR |
| GTGCATAATCGCAGATGGAA+AGG | 0.570624 | 4_1:+47449511 | Msa0551490:intron |
| GATGTGGCAGCTCCAATTTG+TGG | 0.572587 | 4_1:-47446307 | Msa0551480:CDS |
| ATGAGCATCTATCTCTTCCT+CGG | 0.573503 | 4_1:+47453809 | None:intergenic |
| CGGCTTGCAAGTGCTATCGA+TGG | 0.576690 | 4_1:+47445723 | None:intergenic |
| CGGCTTGCAAGTGCTATCGA+TGG | 0.576690 | 4_1:+47454099 | None:intergenic |
| ACTTGCGAGTCTGAATTCAC+AGG | 0.580218 | 4_1:-47447873 | Msa0551480:CDS |
| AAAAGAAAACAAAGAGAAAG+GGG | 0.580909 | 4_1:-47443777 | Msa0551480:CDS |
| AGATCTCGGGACACGATGCA+GGG | 0.584894 | 4_1:-47455222 | Msa0551480:five_prime_UTR |
| TACTGCACCTTCTATGTCCG+AGG | 0.589699 | 4_1:-47445430 | Msa0551480:CDS |
| TACTGCACCTTCTATGTCCG+AGG | 0.589699 | 4_1:-47453826 | Msa0551480:five_prime_UTR |
| GTTAGGTTGTTGGAATCAGA+AGG | 0.590984 | 4_1:-47446722 | Msa0551480:CDS |
| GGAAGTGCTTGCAACTTATG+CGG | 0.594099 | 4_1:-47443405 | Msa0551480:three_prime_UTR |
| GACAAAATACTTTATTAGAG+AGG | 0.597106 | 4_1:-47449488 | Msa0551480:five_prime_UTR |
| CTTGCAAGTGCTATCGATGG+AGG | 0.598024 | 4_1:+47445726 | None:intergenic |
| CTTGCAAGTGCTATCGATGG+AGG | 0.598024 | 4_1:+47454102 | None:intergenic |
| CCCAAGCATTCACAAAAGCA+TGG | 0.613213 | 4_1:+47448425 | Msa0551490:intron |
| TCATCCTGTCCACAAATACA+AGG | 0.613994 | 4_1:-47453790 | Msa0551480:five_prime_UTR |
| CTTGCGAGTCTGAATTCACA+GGG | 0.614185 | 4_1:-47447872 | Msa0551480:CDS |
| GCTTGGCTGACATCATCATG+GGG | 0.617695 | 4_1:+47447849 | Msa0551490:CDS |
| GAAGTGCCATCAAACGCCCT+CGG | 0.619013 | 4_1:+47454079 | None:intergenic |
| GATCGAGGGACACGATGCTG+GGG | 0.619534 | 4_1:-47455556 | Msa0551480:five_prime_UTR |
| GACCGTTCAAGAATTTGAAG+AGG | 0.619547 | 4_1:+47447953 | Msa0551490:CDS |
| GATCGTGGGACACGATGCAG+GGG | 0.622017 | 4_1:-47455870 | Msa0551480:five_prime_UTR |
| GTAGTTCTGTGTGGCCAAGA+AGG | 0.622680 | 4_1:+47445760 | None:intergenic |
| GTAGTTCTGTGTGGCCAAGA+AGG | 0.622680 | 4_1:+47454136 | None:intergenic |
| CAGATGGAAAGGAAAGCTCA+AGG | 0.626656 | 4_1:+47449522 | Msa0551490:intron |
| GGTCCAAGTTGTATTGGAGT+CGG | 0.632277 | 4_1:-47446701 | Msa0551480:intron |
| GTCAGCCAAGCAAGGTACAA+GGG | 0.642769 | 4_1:-47447837 | Msa0551480:intron |
| ATGATGATGTCAGCCAAGCA+AGG | 0.643183 | 4_1:-47447845 | Msa0551480:CDS |
| TAGATGTCTTTCGGACGATG+TGG | 0.649543 | 4_1:-47446323 | Msa0551480:CDS |
| GTGAATTCAGACTCGCAAGT+GGG | 0.653816 | 4_1:+47447876 | Msa0551490:CDS |
| AGAAGCTTGATGATGAAGAG+AGG | 0.654273 | 4_1:+47448390 | Msa0551490:intron |
| CTCCATGAACTACAATACGA+AGG | 0.654568 | 4_1:+47443722 | None:intergenic |
| TGTGAATTCAGACTCGCAAG+TGG | 0.664881 | 4_1:+47447875 | Msa0551490:CDS |
| GATCTCGGGACACGATGCAG+GGG | 0.665011 | 4_1:-47455221 | Msa0551480:five_prime_UTR |
| TCTGTTCAGAAAAGTAAACA+AGG | 0.669586 | 4_1:+47449549 | Msa0551490:intron |
| CTTCGTATTGTAGTTCATGG+AGG | 0.671942 | 4_1:-47443721 | Msa0551480:three_prime_UTR |
| CCTTTGGATACAGAATGTGA+AGG | 0.689990 | 4_1:-47443845 | Msa0551480:intron |
| ACGCGGTCAGTTGGACATGG+CGG | 0.694583 | 4_1:+47443616 | None:intergenic |
| TTTATAAGCAAGCTTTAACG+CGG | 0.695111 | 4_1:+47443599 | None:intergenic |
| TATGCAACCGTAGTTCTGTG+TGG | 0.732630 | 4_1:+47445751 | None:intergenic |
| TATGCAACCGTAGTTCTGTG+TGG | 0.732630 | 4_1:+47454127 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTATATTATAAAATA+TGG | + | chr4_1:47445684-47445703 | None:intergenic | 0.0% |
| !! | TATATTTATATTATAAAATA+TGG | + | chr4_1:47446518-47446537 | None:intergenic | 0.0% |
| !! | AGAAAATTATAACATTTATT+CGG | - | chr4_1:47443342-47443361 | Msa0551480:three_prime_UTR | 10.0% |
| !!! | ATATAAAATTGATTCTAAAA+TGG | - | chr4_1:47444235-47444254 | Msa0551480:intron | 10.0% |
| !! | AAGAAAAAAAAAACTAAATA+AGG | + | chr4_1:47445186-47445205 | None:intergenic | 10.0% |
| !!! | ATTAAATATTTTTTATTCTC+TGG | - | chr4_1:47446002-47446021 | Msa0551480:intron | 10.0% |
| !!! | ATTAAATATTTTTTATTCTC+TGG | - | chr4_1:47446002-47446021 | Msa0551480:intron | 10.0% |
| !!! | TTATTTTGAATGTTTATTTA+AGG | + | chr4_1:47447073-47447092 | None:intergenic | 10.0% |
| !!! | ATTAAATATTTTTTATTCTC+TGG | - | chr4_1:47446002-47446021 | Msa0551480:intron | 10.0% |
| !!! | CACTTTTTAAATTTATTTTT+AGG | + | chr4_1:47448855-47448874 | Msa0551490:intron | 10.0% |
| !!! | TAATTTTGAATGTTTATTTA+AGG | + | chr4_1:47449027-47449046 | Msa0551490:intron | 10.0% |
| !! | ATTCATAATATGAAATAAAA+GGG | + | chr4_1:47449687-47449706 | Msa0551490:intron | 10.0% |
| !! | TATTCATAATATGAAATAAA+AGG | + | chr4_1:47449688-47449707 | Msa0551490:intron | 10.0% |
| !! | TGTTTGTTTAATATATAATT+TGG | + | chr4_1:47452001-47452020 | Msa0551490:intron | 10.0% |
| !! | TCTTTATATAATTTAAAAAC+CGG | - | chr4_1:47452247-47452266 | Msa0551480:intron | 10.0% |
| !!! | ATTAAATATTTTTTATTCTC+TGG | - | chr4_1:47446002-47446021 | Msa0551480:intron | 10.0% |
| !! | TTAAACATATATATATTTGA+TGG | - | chr4_1:47454774-47454793 | Msa0551480:intron | 10.0% |
| !!! | TAAATGTTATAATTTTCTAC+AGG | + | chr4_1:47443340-47443359 | None:intergenic | 15.0% |
| !!! | TAAATGTTATATTTTTCTAC+AGG | + | chr4_1:47443489-47443508 | None:intergenic | 15.0% |
| !!! | ATGAAAAAGCAAATTTTTTT+TGG | + | chr4_1:47443786-47443805 | None:intergenic | 15.0% |
| !! | ATGAAGAAGAAAAAAAAATT+TGG | + | chr4_1:47443946-47443965 | None:intergenic | 15.0% |
| !!! | ATGAAAAAGCAAATTTTTTT+TGG | + | chr4_1:47443786-47443805 | None:intergenic | 15.0% |
| !! | AAATTGAAAATTCATATTTG+AGG | - | chr4_1:47445475-47445494 | Msa0551480:intron | 15.0% |
| !! | AATTGAAAATTCATATTTGA+GGG | - | chr4_1:47445476-47445495 | Msa0551480:intron | 15.0% |
| !! | AACATATGACTAAAAAAAAA+TGG | + | chr4_1:47445623-47445642 | None:intergenic | 15.0% |
| !!! | TTATTTTGAATGTTTATTTC+AGG | + | chr4_1:47446248-47446267 | None:intergenic | 15.0% |
| !! | AACATATGACTAAAAAAAAA+TGG | + | chr4_1:47445623-47445642 | None:intergenic | 15.0% |
| !!! | CACTTTTTAAATTTATTTTC+AGG | + | chr4_1:47446076-47446095 | None:intergenic | 15.0% |
| !! | AAACATATGACTAAAAAAAA+TGG | + | chr4_1:47445624-47445643 | None:intergenic | 15.0% |
| !!! | GTTTCAATTTTAAACTTTTA+TGG | - | chr4_1:47447298-47447317 | Msa0551480:intron | 15.0% |
| !! | TTAATTCGAAATTTCATTAA+AGG | + | chr4_1:47447477-47447496 | None:intergenic | 15.0% |
| !!! | CACTTTTTAAATTTATTATC+AGG | + | chr4_1:47448017-47448036 | Msa0551490:CDS | 15.0% |
| !!! | TTTAATGTTTATTTAAGGTA+TGG | + | chr4_1:47448184-47448203 | Msa0551490:CDS | 15.0% |
| !! | AAACATATGACTAAAAAAAA+TGG | + | chr4_1:47445624-47445643 | None:intergenic | 15.0% |
| !!! | GTTTCAATTTTAAACTTTTA+TGG | - | chr4_1:47447298-47447317 | Msa0551480:intron | 15.0% |
| !! | AAATACCTTTAATGAAATTT+CGG | - | chr4_1:47445806-47445825 | Msa0551480:CDS | 15.0% |
| !!! | TTTTTGACAAGTTATTTTTA+TGG | - | chr4_1:47448906-47448925 | Msa0551480:intron | 15.0% |
| !!! | TTTTGACAAGTTATTTTTAT+GGG | - | chr4_1:47448907-47448926 | Msa0551480:intron | 15.0% |
| !! | ATATATGATGAACTTAATTT+CGG | - | chr4_1:47444569-47444588 | Msa0551480:intron | 15.0% |
| !!! | AAAAATTAATTGTTGTTTGT+TGG | + | chr4_1:47451491-47451510 | Msa0551490:CDS | 15.0% |
| !! | AATATTATTATCAACGTATA+AGG | + | chr4_1:47452276-47452295 | Msa0551490:CDS | 15.0% |
| !! | ATTAGCTAATCTTATTAAAA+AGG | - | chr4_1:47452819-47452838 | Msa0551480:intron | 15.0% |
| !! | TAACATGAAAAAATAATTGA+TGG | + | chr4_1:47452970-47452989 | Msa0551490:intron | 15.0% |
| !! | AAATTGAAAATTCATATTTG+AGG | - | chr4_1:47445475-47445494 | Msa0551480:intron | 15.0% |
| !! | AATTGAAAATTCATATTTGA+GGG | - | chr4_1:47445476-47445495 | Msa0551480:intron | 15.0% |
| !! | AAACATATGACTAAAAAAAA+TGG | + | chr4_1:47445624-47445643 | None:intergenic | 15.0% |
| !!! | GTTTCAATTTTAAACTTTTA+TGG | - | chr4_1:47447298-47447317 | Msa0551480:intron | 15.0% |
| !! | AAATACCTTTAATGAAATTT+CGG | - | chr4_1:47445806-47445825 | Msa0551480:CDS | 15.0% |
| !!! | CACTTTTTAAATTTATTTTC+AGG | + | chr4_1:47446076-47446095 | None:intergenic | 15.0% |
| !!! | ATATTTTTACTCCTATATAT+AGG | - | chr4_1:47454744-47454763 | Msa0551480:intron | 15.0% |
| !!! | TATTTTTACTCCTATATATA+GGG | - | chr4_1:47454745-47454764 | Msa0551480:intron | 15.0% |
| !! | TATAAGATATATAATCAGAA+TGG | + | chr4_1:47455425-47455444 | None:intergenic | 15.0% |
| !! | GTATATGTAATTAATTATGT+TGG | - | chr4_1:47455720-47455739 | Msa0551480:intron | 15.0% |
| !! | GATGAAGATGAAAAAAAAAT+TGG | + | chr4_1:47443616-47443635 | None:intergenic | 20.0% |
| !! | AAAGAAGAATATTCAAACAT+AGG | + | chr4_1:47443741-47443760 | None:intergenic | 20.0% |
| !! | AAAAACAAAGATTGAAACAT+AGG | + | chr4_1:47444071-47444090 | None:intergenic | 20.0% |
| !! | TTCAGAAAAGAGAAAAAAAA+AGG | + | chr4_1:47444385-47444404 | None:intergenic | 20.0% |
| !! | TTATTTGACTATTCTTTACA+TGG | + | chr4_1:47444607-47444626 | None:intergenic | 20.0% |
| !! | AAAAGAACAAAATCAGATAT+AGG | + | chr4_1:47444768-47444787 | None:intergenic | 20.0% |
| !!! | GTTTCGATTTTAAACTTTTA+TGG | - | chr4_1:47445640-47445659 | Msa0551480:intron | 20.0% |
| !!! | TTTTTGACAAGTTATTTGTA+TGG | - | chr4_1:47446127-47446146 | Msa0551480:intron | 20.0% |
| !!! | GTTTCGATTTTAAACTTTTA+TGG | - | chr4_1:47445640-47445659 | Msa0551480:intron | 20.0% |
| !!! | TTTTTGACAAGTTATTTGTA+TGG | - | chr4_1:47446127-47446146 | Msa0551480:intron | 20.0% |
| !!! | TTGAATGTTTATTTAAGGTA+TGG | + | chr4_1:47447068-47447087 | None:intergenic | 20.0% |
| !!! | TCGTTTTCAGATATAATTAA+GGG | + | chr4_1:47447654-47447673 | Msa0551490:CDS | 20.0% |
| !!! | ATCGTTTTCAGATATAATTA+AGG | + | chr4_1:47447655-47447674 | Msa0551490:CDS | 20.0% |
| !!! | TTTTTGACAAGTTATTTGTA+TGG | - | chr4_1:47446127-47446146 | Msa0551480:intron | 20.0% |
| !!! | TTTGACAAGTTATTTTTATG+GGG | - | chr4_1:47448908-47448927 | Msa0551480:intron | 20.0% |
| !!! | TTGAATGTTTATTTAAGGTA+TGG | + | chr4_1:47447068-47447087 | None:intergenic | 20.0% |
| !! | TTATTTGACTATTCTTTACA+TGG | + | chr4_1:47444607-47444626 | None:intergenic | 20.0% |
| !!! | GAAATTTTGAGTAATGTTTA+AGG | - | chr4_1:47449714-47449733 | Msa0551480:intron | 20.0% |
| !!! | GTATTTCTTTTTGAATAGTA+TGG | - | chr4_1:47449744-47449763 | Msa0551480:intron | 20.0% |
| !! | TCGAGTATTAAATATATTAG+TGG | - | chr4_1:47449769-47449788 | Msa0551480:intron | 20.0% |
| !! | ATTATAAAACTAGTTACAGT+AGG | + | chr4_1:47450360-47450379 | Msa0551490:intron | 20.0% |
| !! | ATCTACAATTTAAATAAGAG+AGG | - | chr4_1:47450565-47450584 | Msa0551480:intron | 20.0% |
| !! | TCTACAATTTAAATAAGAGA+GGG | - | chr4_1:47450566-47450585 | Msa0551480:intron | 20.0% |
| !! | ATGCAATACATGAAAAAAAT+AGG | + | chr4_1:47450807-47450826 | Msa0551490:intron | 20.0% |
| !! | TATATAATGAGTACAAAAAG+TGG | + | chr4_1:47451373-47451392 | Msa0551490:CDS | 20.0% |
| !! | TATAAAGATAACTGTTGATA+TGG | - | chr4_1:47451389-47451408 | Msa0551480:intron | 20.0% |
| !! | CTTCCTGTTTATATATATAA+AGG | - | chr4_1:47451452-47451471 | Msa0551480:intron | 20.0% |
| !! | ATGCCTTTATATATATAAAC+AGG | + | chr4_1:47451458-47451477 | Msa0551490:CDS | 20.0% |
| !! | AAGTAAAAGAAACAGTTAAA+GGG | - | chr4_1:47452030-47452049 | Msa0551480:intron | 20.0% |
| !! | CAACAAGAATTTATTTATCT+TGG | - | chr4_1:47452517-47452536 | Msa0551480:intron | 20.0% |
| !! | AAACTAAATCTTCAAACAAT+AGG | + | chr4_1:47452936-47452955 | Msa0551490:intron | 20.0% |
| !! | AAAAGAACAAAATCAGATAT+AGG | + | chr4_1:47444768-47444787 | None:intergenic | 20.0% |
| !! | GAAAAGAAAAAAACTGAATA+AGG | + | chr4_1:47453580-47453599 | None:intergenic | 20.0% |
| !! | AATAATGATATCGAATCTAT+AGG | - | chr4_1:47453942-47453961 | Msa0551480:intron | 20.0% |
| !!! | TTTTTGACTAGTTATTTGTA+TGG | - | chr4_1:47454550-47454569 | Msa0551480:intron | 20.0% |
| !! | TTAAGTTAAACCCTATATAT+AGG | + | chr4_1:47454758-47454777 | None:intergenic | 20.0% |
| !! | AAAAGAACAAAATCAGATAT+AGG | + | chr4_1:47444768-47444787 | None:intergenic | 20.0% |
| !!! | TGATTTACTATATTTTCTGA+AGG | - | chr4_1:47455079-47455098 | Msa0551480:intron | 20.0% |
| !!! | GATTTACTATATTTTCTGAA+GGG | - | chr4_1:47455080-47455099 | Msa0551480:intron | 20.0% |
| !!! | TATATATACCTTTTGTGTTT+TGG | + | chr4_1:47455156-47455175 | None:intergenic | 20.0% |
| !!! | CATTTGATAATCAATACAAA+AGG | + | chr4_1:47455609-47455628 | None:intergenic | 20.0% |
| !!! | CTTTTGTATTGATTATCAAA+TGG | - | chr4_1:47455607-47455626 | Msa0551480:intron | 20.0% |
| !! | AATAAACACTTGAAAGAAAT+TGG | + | chr4_1:47455794-47455813 | None:intergenic | 20.0% |
| !!! | GGTGAAAAAGCAAATTTTTT+TGG | + | chr4_1:47443303-47443322 | None:intergenic | 25.0% |
| ! | TATAACATTTATTCGGATTG+AGG | - | chr4_1:47443349-47443368 | Msa0551480:three_prime_UTR | 25.0% |
| ! | ATAACATTTATTCGGATTGA+GGG | - | chr4_1:47443350-47443369 | Msa0551480:three_prime_UTR | 25.0% |
| !! | TATTCCTAATTTTGTAGTTC+TGG | - | chr4_1:47443507-47443526 | Msa0551480:three_prime_UTR | 25.0% |
| ! | AATAAAGAAAGATTGAAACC+TGG | + | chr4_1:47443576-47443595 | None:intergenic | 25.0% |
| !! | AGATCTAGAACTACAAAATT+AGG | + | chr4_1:47443849-47443868 | None:intergenic | 25.0% |
| !!! | AATTTTGTAGTTCTAGATCT+CGG | - | chr4_1:47443849-47443868 | Msa0551480:intron | 25.0% |
| !! | CAAATTTTATAATTGTGGAC+AGG | + | chr4_1:47444152-47444171 | None:intergenic | 25.0% |
| !! | GTTGGCAAATTTTATAATTG+TGG | + | chr4_1:47444157-47444176 | None:intergenic | 25.0% |
| ! | GCAAAAAAAATGTCAAATGT+TGG | + | chr4_1:47444175-47444194 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGCTTCTCATTGT+TGG | - | chr4_1:47444185-47444204 | Msa0551480:intron | 25.0% |
| ! | TATGATGAACTTAATTTCAG+AGG | - | chr4_1:47444572-47444591 | Msa0551480:intron | 25.0% |
| ! | AATGTCAAAATCCATGTAAA+GGG | + | chr4_1:47445370-47445389 | None:intergenic | 25.0% |
| !! | TATGGTTGTAGATTATGTTT+TGG | - | chr4_1:47445658-47445677 | Msa0551480:intron | 25.0% |
| ! | AACTGCAGAAATTTCATTAA+AGG | + | chr4_1:47445814-47445833 | None:intergenic | 25.0% |
| ! | AAATATTTAATTGAGCGCAA+TGG | + | chr4_1:47445993-47446012 | None:intergenic | 25.0% |
| ! | CAAAAGAACTTGTAATTAAG+CGG | + | chr4_1:47446160-47446179 | None:intergenic | 25.0% |
| !! | TTGAATGTTTATTTCAGGTA+TGG | + | chr4_1:47446243-47446262 | None:intergenic | 25.0% |
| ! | AGATCATAATACACTATTTG+AGG | - | chr4_1:47446286-47446305 | Msa0551480:intron | 25.0% |
| ! | GATCATAATACACTATTTGA+GGG | - | chr4_1:47446287-47446306 | Msa0551480:intron | 25.0% |
| ! | CATTTATTAATCCAAACTTG+TGG | - | chr4_1:47446420-47446439 | Msa0551480:intron | 25.0% |
| ! | ATTAAAACTTTCCACAAGTT+TGG | + | chr4_1:47446434-47446453 | None:intergenic | 25.0% |
| !! | TATGGTTGTAGATTATGTTT+TGG | - | chr4_1:47445658-47445677 | Msa0551480:intron | 25.0% |
| ! | AACTGCAGAAATTTCATTAA+AGG | + | chr4_1:47445814-47445833 | None:intergenic | 25.0% |
| ! | CAAAAGAACTTGTAATTAAG+CGG | + | chr4_1:47446160-47446179 | None:intergenic | 25.0% |
| ! | AGATCATAATACACTATTTG+AGG | - | chr4_1:47446286-47446305 | Msa0551480:intron | 25.0% |
| ! | GATCATAATACACTATTTGA+GGG | - | chr4_1:47446287-47446306 | Msa0551480:intron | 25.0% |
| ! | CATTTATTAATCCAAACTTG+TGG | - | chr4_1:47446420-47446439 | Msa0551480:intron | 25.0% |
| ! | ATTAAAACTTTCCACAAGTT+TGG | + | chr4_1:47446434-47446453 | None:intergenic | 25.0% |
| !! | CGTTTTCAGATATAATTAAG+GGG | + | chr4_1:47447653-47447672 | None:intergenic | 25.0% |
| ! | GTTAATGTGTCAAGAAAAAT+TGG | + | chr4_1:47447757-47447776 | Msa0551490:CDS | 25.0% |
| ! | AAATATTTAATTGAGCGCAA+TGG | + | chr4_1:47445993-47446012 | None:intergenic | 25.0% |
| ! | CAAAAGAACTTGTAATTAAG+CGG | + | chr4_1:47446160-47446179 | None:intergenic | 25.0% |
| ! | AGATCATAATACACTATTTG+AGG | - | chr4_1:47446286-47446305 | Msa0551480:intron | 25.0% |
| ! | GATCATAATACACTATTTGA+GGG | - | chr4_1:47446287-47446306 | Msa0551480:intron | 25.0% |
| ! | CATTTATTAATCCAAACTTG+TGG | - | chr4_1:47446420-47446439 | Msa0551480:intron | 25.0% |
| ! | ATTAAAACTTTCCACAAGTT+TGG | + | chr4_1:47446434-47446453 | None:intergenic | 25.0% |
| ! | AAATATTTAATTGAGCGCAA+TGG | + | chr4_1:47445993-47446012 | None:intergenic | 25.0% |
| !!! | TTGACAAGTTATTTTTATGG+GGG | - | chr4_1:47448909-47448928 | Msa0551480:intron | 25.0% |
| ! | CAAAAGAACTTGTAATTAAG+CGG | + | chr4_1:47446160-47446179 | None:intergenic | 25.0% |
| ! | AGATCATAATACACTATTTG+AGG | - | chr4_1:47446286-47446305 | Msa0551480:intron | 25.0% |
| ! | GATCATAATACACTATTTGA+GGG | - | chr4_1:47446287-47446306 | Msa0551480:intron | 25.0% |
| !! | ACTGATAATGATATCGAAAA+TGG | - | chr4_1:47449133-47449152 | Msa0551480:intron | 25.0% |
| ! | ACAAAGAGCTTAAGAAAAAA+GGG | + | chr4_1:47449432-47449451 | Msa0551490:intron | 25.0% |
| ! | AACAAAGAGCTTAAGAAAAA+AGG | + | chr4_1:47449433-47449452 | Msa0551490:intron | 25.0% |
| ! | GACAAAATACTTTATTAGAG+AGG | - | chr4_1:47449597-47449616 | Msa0551480:intron | 25.0% |
| ! | GTTATTTGCAGTAATGTTTA+AGG | - | chr4_1:47449619-47449638 | Msa0551480:intron | 25.0% |
| ! | TAATTAGTATAACCTGCTAT+AGG | - | chr4_1:47449834-47449853 | Msa0551480:intron | 25.0% |
| ! | TCAAATATTAGAAGCTATAG+CGG | + | chr4_1:47450178-47450197 | Msa0551490:intron | 25.0% |
| ! | AACCATTGTTCTGTTATAAA+AGG | - | chr4_1:47450296-47450315 | Msa0551480:intron | 25.0% |
| !!! | GCTACTCTGTTTTTATTTAT+GGG | + | chr4_1:47450443-47450462 | Msa0551490:CDS | 25.0% |
| !! | TGATTTTATGATATGCTGAT+TGG | + | chr4_1:47450480-47450499 | Msa0551490:intron | 25.0% |
| ! | ATTTAAATAAGAGAGGGAAA+TGG | - | chr4_1:47450572-47450591 | Msa0551480:intron | 25.0% |
| ! | ACATGAAAAAAATAGGTTTC+AGG | + | chr4_1:47450800-47450819 | Msa0551490:intron | 25.0% |
| !! | GCAGATTTTCAAATAAAGAA+AGG | + | chr4_1:47450954-47450973 | Msa0551490:CDS | 25.0% |
| ! | ATATTTCAACGAACATTACA+AGG | + | chr4_1:47450987-47451006 | Msa0551490:CDS | 25.0% |
| !!! | TATATTTTCTCTTAGCTTTC+TGG | - | chr4_1:47451019-47451038 | Msa0551480:intron | 25.0% |
| !! | AGAGATTTCAATTTTTCTCA+AGG | + | chr4_1:47451276-47451295 | Msa0551490:intron | 25.0% |
| ! | TTACGAATCTATCATCAATT+TGG | - | chr4_1:47451672-47451691 | Msa0551480:intron | 25.0% |
| ! | ATAATTTGGCAAATTGTAGA+AGG | + | chr4_1:47451987-47452006 | Msa0551490:intron | 25.0% |
| ! | GAAGTAAAAGAAACAGTTAA+AGG | - | chr4_1:47452029-47452048 | Msa0551480:intron | 25.0% |
| ! | CTGTAAATTTATGTTATGCT+TGG | - | chr4_1:47452611-47452630 | Msa0551480:intron | 25.0% |
| !! | AATAATTGATGGTAACTACA+TGG | + | chr4_1:47452959-47452978 | Msa0551490:intron | 25.0% |
| !!! | ATTTTTTCATGTTACCAATC+AGG | - | chr4_1:47452976-47452995 | Msa0551480:intron | 25.0% |
| ! | AATGTCAAAATCCATGTAAA+GGG | + | chr4_1:47445370-47445389 | None:intergenic | 25.0% |
| ! | CATTTATTAATCCAAACTTG+TGG | - | chr4_1:47446420-47446439 | Msa0551480:intron | 25.0% |
| ! | ATTAAAACTTTCCACAAGTT+TGG | + | chr4_1:47446434-47446453 | None:intergenic | 25.0% |
| ! | AAATATTTAATTGAGCGCAA+TGG | + | chr4_1:47445993-47446012 | None:intergenic | 25.0% |
| !! | ATTTGAATCTTTGAAAGTTC+TGG | - | chr4_1:47455183-47455202 | Msa0551480:intron | 25.0% |
| ! | CAAAAGAAAACAAAGAGAAA+GGG | - | chr4_1:47455307-47455326 | Msa0551480:intron | 25.0% |
| ! | AAAAGAAAACAAAGAGAAAG+GGG | - | chr4_1:47455308-47455327 | Msa0551480:intron | 25.0% |
| ! | AGTCATAATTTCAACATGTT+TGG | - | chr4_1:47455549-47455568 | Msa0551480:five_prime_UTR | 25.0% |
| ! | TCACATTGTAATCTAATCTT+AGG | - | chr4_1:47455659-47455678 | Msa0551480:intron | 25.0% |
| ! | TTAACAACCTGAATATAGTT+TGG | - | chr4_1:47455747-47455766 | Msa0551480:intron | 25.0% |
| !!! | ATATAGTTTGGTTTGTTCAT+TGG | - | chr4_1:47455759-47455778 | Msa0551480:intron | 25.0% |
| ! | TTTATAATCCAAAGTTCAGT+TGG | - | chr4_1:47455833-47455852 | Msa0551480:intron | 25.0% |
| !!! | GGTGAAAAGGCAAATTTTTT+TGG | + | chr4_1:47443452-47443471 | None:intergenic | 30.0% |
| ! | TATTCCGAATTTTGTAGTTC+TGG | - | chr4_1:47443671-47443690 | Msa0551480:three_prime_UTR | 30.0% |
| !!! | ATTTTGTAGTTCTAGATCTC+GGG | - | chr4_1:47443850-47443869 | Msa0551480:intron | 30.0% |
| AGTAAAGAAAGATTGAAACG+TGG | + | chr4_1:47443906-47443925 | None:intergenic | 30.0% | |
| ! | TATTCCGAATTTTGTAGTTC+TGG | - | chr4_1:47443671-47443690 | Msa0551480:three_prime_UTR | 30.0% |
| AGATCCAGAACTACAAAATT+CGG | + | chr4_1:47444009-47444028 | None:intergenic | 30.0% | |
| !!! | AATTTTGTAGTTCTGGATCT+AGG | - | chr4_1:47444009-47444028 | Msa0551480:intron | 30.0% |
| !!! | ATTTTGTAGTTCTGGATCTA+GGG | - | chr4_1:47444010-47444029 | Msa0551480:intron | 30.0% |
| ! | TTTTTGTGCAAAATTGCAGA+TGG | + | chr4_1:47444435-47444454 | None:intergenic | 30.0% |
| TTGCACAAAAAAATACCCAA+AGG | - | chr4_1:47444444-47444463 | Msa0551480:intron | 30.0% | |
| AAATACCCAAAGGACATTTA+AGG | - | chr4_1:47444454-47444473 | Msa0551480:intron | 30.0% | |
| AATACCCAAAGGACATTTAA+GGG | - | chr4_1:47444455-47444474 | Msa0551480:intron | 30.0% | |
| ATTTCCCTTAAATGTCCTTT+GGG | + | chr4_1:47444462-47444481 | None:intergenic | 30.0% | |
| AATTTCCCTTAAATGTCCTT+TGG | + | chr4_1:47444463-47444482 | None:intergenic | 30.0% | |
| ACAAGTAGCGTTTAAATAAC+TGG | - | chr4_1:47444528-47444547 | Msa0551480:intron | 30.0% | |
| GAATGTCAAAATCCATGTAA+AGG | + | chr4_1:47445371-47445390 | None:intergenic | 30.0% | |
| ! | ATAGTGAATTTCATTTTCCG+AGG | + | chr4_1:47445439-47445458 | None:intergenic | 30.0% |
| ATTTGAGGGTGAAAAAGTAA+AGG | - | chr4_1:47445490-47445509 | Msa0551480:intron | 30.0% | |
| GATAATGATATCAAATCTGC+AGG | - | chr4_1:47445546-47445565 | Msa0551480:intron | 30.0% | |
| TTGACAAGTTATTTGTATGG+TGG | - | chr4_1:47446130-47446149 | Msa0551480:intron | 30.0% | |
| TTATCATCACTATCATCACT+GGG | + | chr4_1:47446185-47446204 | None:intergenic | 30.0% | |
| TTTATCATCACTATCATCAC+TGG | + | chr4_1:47446186-47446205 | None:intergenic | 30.0% | |
| ! | TGATGATAGTGATGATAAAG+CGG | - | chr4_1:47446187-47446206 | Msa0551480:intron | 30.0% |
| ATTTGAGGGTGAAAAAGTAA+AGG | - | chr4_1:47445490-47445509 | Msa0551480:intron | 30.0% | |
| GATAATGATATCAAATCTGC+AGG | - | chr4_1:47445546-47445565 | Msa0551480:intron | 30.0% | |
| TAGTCATGTTTACAATGTTC+AGG | + | chr4_1:47446744-47446763 | None:intergenic | 30.0% | |
| TGACTAATTCTATCCAGAAA+CGG | - | chr4_1:47446758-47446777 | Msa0551480:intron | 30.0% | |
| AAATATTTAATCGAGCGCAA+TGG | + | chr4_1:47446827-47446846 | None:intergenic | 30.0% | |
| TTGACAAGTTATTTGTATGG+TGG | - | chr4_1:47446130-47446149 | Msa0551480:intron | 30.0% | |
| ! | ATTTAAGGTATGGCATTGAA+TGG | + | chr4_1:47447058-47447077 | None:intergenic | 30.0% |
| ATTTGAGGGTGAAAAAGTAA+AGG | - | chr4_1:47445490-47445509 | Msa0551480:intron | 30.0% | |
| GATAATGATATCGAATCTGT+AGG | - | chr4_1:47447182-47447201 | Msa0551480:intron | 30.0% | |
| TTTCAGACATTTCTAATTCG+TGG | + | chr4_1:47447501-47447520 | None:intergenic | 30.0% | |
| !! | TGGAAAACGAGTTGATTATT+CGG | + | chr4_1:47447601-47447620 | None:intergenic | 30.0% |
| GATATAATTAAGGGGAAAGA+GGG | + | chr4_1:47447645-47447664 | None:intergenic | 30.0% | |
| AGATATAATTAAGGGGAAAG+AGG | + | chr4_1:47447646-47447665 | None:intergenic | 30.0% | |
| TTGACAAGTTATTTGTATGG+TGG | - | chr4_1:47446130-47446149 | Msa0551480:intron | 30.0% | |
| TTATCATCACTATCATCACT+GGG | + | chr4_1:47446185-47446204 | None:intergenic | 30.0% | |
| TTTATCATCACTATCATCAC+TGG | + | chr4_1:47446186-47446205 | None:intergenic | 30.0% | |
| ! | TGATGATAGTGATGATAAAG+CGG | - | chr4_1:47446187-47446206 | Msa0551480:intron | 30.0% |
| ! | ATTTAAGGTATGGCATTGAA+TGG | + | chr4_1:47447058-47447077 | None:intergenic | 30.0% |
| ATTTGAGGGTGAAAAAGTAA+AGG | - | chr4_1:47445490-47445509 | Msa0551480:intron | 30.0% | |
| GATAATGATGTCGAATCTAT+AGG | - | chr4_1:47448298-47448317 | Msa0551480:intron | 30.0% | |
| AACTGCCGAAATTTCATTAA+AGG | + | chr4_1:47448593-47448612 | Msa0551490:intron | 30.0% | |
| GGAACAAATTATAAAGCTTC+CGG | + | chr4_1:47445889-47445908 | None:intergenic | 30.0% | |
| ACAACAAACCCAAAATTCAT+GGG | - | chr4_1:47448808-47448827 | Msa0551480:intron | 30.0% | |
| ! | TTAAGACTCCCATGAATTTT+GGG | + | chr4_1:47448819-47448838 | Msa0551490:intron | 30.0% |
| !! | TTTAAGACTCCCATGAATTT+TGG | + | chr4_1:47448820-47448839 | Msa0551490:intron | 30.0% |
| TTATCATCACTATCATCACT+GGG | + | chr4_1:47446185-47446204 | None:intergenic | 30.0% | |
| TTTATCATCACTATCATCAC+TGG | + | chr4_1:47446186-47446205 | None:intergenic | 30.0% | |
| ! | TGATGATAGTGATGATAAAG+CGG | - | chr4_1:47446187-47446206 | Msa0551480:intron | 30.0% |
| ! | ATTTAAGGTATGGCATTGAA+TGG | + | chr4_1:47447058-47447077 | None:intergenic | 30.0% |
| ATTTGAGGGTGAAAAAGTAA+AGG | - | chr4_1:47445490-47445509 | Msa0551480:intron | 30.0% | |
| ATTTCCCTTAAATGTCCTTT+GGG | + | chr4_1:47444462-47444481 | None:intergenic | 30.0% | |
| AATTTCCCTTAAATGTCCTT+TGG | + | chr4_1:47444463-47444482 | None:intergenic | 30.0% | |
| ACAAGTAGCGTTTAAATAAC+TGG | - | chr4_1:47444528-47444547 | Msa0551480:intron | 30.0% | |
| TATGATGAACTTAATTTCGG+AGG | - | chr4_1:47449280-47449299 | Msa0551480:intron | 30.0% | |
| GAAAAAAGGGAAAAGAGAAA+AGG | + | chr4_1:47449419-47449438 | Msa0551490:intron | 30.0% | |
| AACAATGAGAAAAAAGGGAA+AGG | + | chr4_1:47449493-47449512 | Msa0551490:intron | 30.0% | |
| CAGAGAACAATGAGAAAAAA+GGG | + | chr4_1:47449498-47449517 | Msa0551490:intron | 30.0% | |
| TCAGAGAACAATGAGAAAAA+AGG | + | chr4_1:47449499-47449518 | Msa0551490:intron | 30.0% | |
| TCTGTTCAGAAAAGTAAACA+AGG | + | chr4_1:47449539-47449558 | Msa0551490:intron | 30.0% | |
| AGGGATAACAAAATCGAAAA+AGG | + | chr4_1:47449668-47449687 | Msa0551490:intron | 30.0% | |
| ACTAAGTTACATCTCTTAAC+TGG | + | chr4_1:47449815-47449834 | Msa0551490:intron | 30.0% | |
| AATCAGTTTACTACTCATCT+TGG | - | chr4_1:47449927-47449946 | Msa0551480:intron | 30.0% | |
| ! | AATTTTCTGCGATATGTGAT+TGG | + | chr4_1:47450115-47450134 | Msa0551490:CDS | 30.0% |
| !! | GTTTTAAATAGCAACTAGAG+TGG | + | chr4_1:47450279-47450298 | Msa0551490:intron | 30.0% |
| ! | CACCTTTTATAACAGAACAA+TGG | + | chr4_1:47450301-47450320 | Msa0551490:intron | 30.0% |
| TAGAGGTGAAATGAAAGTTA+AGG | + | chr4_1:47450410-47450429 | Msa0551490:intron | 30.0% | |
| !!! | GGCTACTCTGTTTTTATTTA+TGG | + | chr4_1:47450444-47450463 | Msa0551490:CDS | 30.0% |
| ! | ATATGCTGATTGGTTGAAAT+TGG | + | chr4_1:47450470-47450489 | Msa0551490:intron | 30.0% |
| ! | AAAAGCATGGTTGGAAAAAA+TGG | + | chr4_1:47450650-47450669 | Msa0551490:intron | 30.0% |
| ! | ATGATGAAGAGAGGTATATT+GGG | + | chr4_1:47450689-47450708 | Msa0551490:intron | 30.0% |
| ! | ATATATTTTTCCAGTTCACG+TGG | - | chr4_1:47450724-47450743 | Msa0551480:intron | 30.0% |
| ! | TCTGTTGAACAGTTTGAAAT+TGG | - | chr4_1:47450884-47450903 | Msa0551480:intron | 30.0% |
| TTCTCTTCCATTTCTTAGTT+AGG | - | chr4_1:47450913-47450932 | Msa0551480:intron | 30.0% | |
| TCTCTTCCATTTCTTAGTTA+GGG | - | chr4_1:47450914-47450933 | Msa0551480:intron | 30.0% | |
| ! | AAAGAAAGGTGTATTTGCAT+GGG | + | chr4_1:47450940-47450959 | Msa0551490:CDS | 30.0% |
| ! | TAAAGAAAGGTGTATTTGCA+TGG | + | chr4_1:47450941-47450960 | Msa0551490:CDS | 30.0% |
| TATATAAACAGGAAGATACC+AGG | + | chr4_1:47451447-47451466 | Msa0551490:CDS | 30.0% | |
| ATCTCCTCAAAAGAAAGTTT+GGG | + | chr4_1:47451548-47451567 | Msa0551490:CDS | 30.0% | |
| CAGTAATTCAAAAAGCTCAA+TGG | + | chr4_1:47451726-47451745 | Msa0551490:intron | 30.0% | |
| ! | TTTTGAATTACTGTCTCGAA+TGG | - | chr4_1:47451733-47451752 | Msa0551480:intron | 30.0% |
| TGATTCTGCTTTATAACTGA+GGG | + | chr4_1:47451899-47451918 | Msa0551490:intron | 30.0% | |
| TACAGACATAATTAGCTACA+TGG | + | chr4_1:47452075-47452094 | Msa0551490:CDS | 30.0% | |
| ! | TTACACTATTTGAGCTTTGT+AGG | - | chr4_1:47452144-47452163 | Msa0551480:intron | 30.0% |
| ! | TCATAATCTCAAGTCTTATC+TGG | - | chr4_1:47452193-47452212 | Msa0551480:intron | 30.0% |
| !! | CTTTCTTTTTGAAAAGGCAA+AGG | + | chr4_1:47452436-47452455 | Msa0551490:CDS | 30.0% |
| ! | TATAAAGTGTCCGTATCTTA+TGG | + | chr4_1:47452549-47452568 | Msa0551490:intron | 30.0% |
| TAAGATACGGACACTTTATA+TGG | - | chr4_1:47452549-47452568 | Msa0551480:intron | 30.0% | |
| GGATTACTATAGTCAACAAT+GGG | + | chr4_1:47452851-47452870 | Msa0551490:intron | 30.0% | |
| AGGATTACTATAGTCAACAA+TGG | + | chr4_1:47452852-47452871 | Msa0551490:intron | 30.0% | |
| TCAAACAATAGGAAGACTAA+AGG | + | chr4_1:47452925-47452944 | Msa0551490:intron | 30.0% | |
| ! | TTATGAAACTTTAAGAGCTC+TGG | - | chr4_1:47453616-47453635 | Msa0551480:intron | 30.0% |
| GAATGTCAAAATCCATGTAA+AGG | + | chr4_1:47445371-47445390 | None:intergenic | 30.0% | |
| !! | ATAGTTAGTTTCATTTTCCG+AGG | + | chr4_1:47453835-47453854 | None:intergenic | 30.0% |
| ATTTGAGGGTGAAAAAGTAA+AGG | - | chr4_1:47445490-47445509 | Msa0551480:intron | 30.0% | |
| AACTGCCGAAATTTCATTAA+AGG | + | chr4_1:47448593-47448612 | Msa0551490:intron | 30.0% | |
| GGAACAAATTATAAAGCTTC+CGG | + | chr4_1:47445889-47445908 | None:intergenic | 30.0% | |
| ! | TTGACTAGTTATTTGTATGG+TGG | - | chr4_1:47454553-47454572 | Msa0551480:intron | 30.0% |
| !!! | AGTTTTCACAGTTGCTTTTT+TGG | - | chr4_1:47454720-47454739 | Msa0551480:intron | 30.0% |
| ! | GCCTTTATTTGCTAATAACT+AGG | - | chr4_1:47455024-47455043 | Msa0551480:intron | 30.0% |
| GCCTAGTTATTAGCAAATAA+AGG | + | chr4_1:47455028-47455047 | None:intergenic | 30.0% | |
| !! | TTGAAAGTTCTGGAGTTTAA+AGG | - | chr4_1:47455193-47455212 | Msa0551480:intron | 30.0% |
| !! | TGAAAGTTCTGGAGTTTAAA+GGG | - | chr4_1:47455194-47455213 | Msa0551480:intron | 30.0% |
| GGTTAACATAGATAAGGTTA+CGG | + | chr4_1:47455222-47455241 | None:intergenic | 30.0% | |
| ACCTTATCTATGTTAACCTT+TGG | - | chr4_1:47455224-47455243 | Msa0551480:five_prime_UTR | 30.0% | |
| TCCAAAGGTTAACATAGATA+AGG | + | chr4_1:47455228-47455247 | None:intergenic | 30.0% | |
| !! | TTTGTTTTCTTTTGCATTGG+TGG | + | chr4_1:47455301-47455320 | None:intergenic | 30.0% |
| !!! | CTCTTTGTTTTCTTTTGCAT+TGG | + | chr4_1:47455304-47455323 | None:intergenic | 30.0% |
| GCAAAAGAAAACAAAGAGAA+AGG | - | chr4_1:47455306-47455325 | Msa0551480:intron | 30.0% | |
| ! | TATACTATTTTCGACCTAGA+TGG | - | chr4_1:47455441-47455460 | Msa0551480:intron | 30.0% |
| ! | TTTATAAGCAAGCTTTAACG+CGG | + | chr4_1:47455489-47455508 | None:intergenic | 30.0% |
| GAACAAACCAAACTATATTC+AGG | + | chr4_1:47455757-47455776 | None:intergenic | 30.0% | |
| GAAAACTGAATGAGGTGAAA+AGG | + | chr4_1:47443316-47443335 | None:intergenic | 35.0% | |
| CGATCCAGAACTACAAAATT+AGG | + | chr4_1:47443514-47443533 | None:intergenic | 35.0% | |
| !!! | AATTTTGTAGTTCTGGATCG+AGG | - | chr4_1:47443514-47443533 | Msa0551480:three_prime_UTR | 35.0% |
| !!! | ATTTTGTAGTTCTGGATCGA+GGG | - | chr4_1:47443515-47443534 | Msa0551480:three_prime_UTR | 35.0% |
| CGATCCAGAACTACAAAATT+CGG | + | chr4_1:47443514-47443533 | None:intergenic | 35.0% | |
| !!! | AATTTTGTAGTTCTGGATCG+AGG | - | chr4_1:47443514-47443533 | Msa0551480:three_prime_UTR | 35.0% |
| !!! | ATTTTGTAGTTCTGGATCGA+GGG | - | chr4_1:47443515-47443534 | Msa0551480:three_prime_UTR | 35.0% |
| AGAATCTGCTCTTCAATTAC+GGG | + | chr4_1:47444212-47444231 | None:intergenic | 35.0% | |
| CAGAATCTGCTCTTCAATTA+CGG | + | chr4_1:47444213-47444232 | None:intergenic | 35.0% | |
| !!! | TGGTTTTAAACGCTTACTCT+TGG | - | chr4_1:47444255-47444274 | Msa0551480:intron | 35.0% |
| !!! | GGTTTTAAACGCTTACTCTT+GGG | - | chr4_1:47444256-47444275 | Msa0551480:intron | 35.0% |
| ACTCAAACCTTGAAAAGTTG+GGG | + | chr4_1:47444289-47444308 | None:intergenic | 35.0% | |
| GACTCAAACCTTGAAAAGTT+GGG | + | chr4_1:47444290-47444309 | None:intergenic | 35.0% | |
| TGACTCAAACCTTGAAAAGT+TGG | + | chr4_1:47444291-47444310 | None:intergenic | 35.0% | |
| TGAACTTAATTTCAGAGGCA+CGG | - | chr4_1:47444577-47444596 | Msa0551480:intron | 35.0% | |
| TGTGTTTGAAGACACTTGAA+GGG | - | chr4_1:47444680-47444699 | Msa0551480:intron | 35.0% | |
| AAACAGAATGAACAGCATTG+AGG | + | chr4_1:47444818-47444837 | None:intergenic | 35.0% | |
| !! | ATATGAAGCTTTAAGAGCTC+TGG | - | chr4_1:47445220-47445239 | Msa0551480:intron | 35.0% |
| !! | TGGCAGATTACTTACTTTTG+GGG | + | chr4_1:47445329-47445348 | None:intergenic | 35.0% |
| !! | CTGGCAGATTACTTACTTTT+GGG | + | chr4_1:47445330-47445349 | None:intergenic | 35.0% |
| ! | TCTGGCAGATTACTTACTTT+TGG | + | chr4_1:47445331-47445350 | None:intergenic | 35.0% |
| GGAGGTAATAACAATTGATC+TGG | + | chr4_1:47445349-47445368 | None:intergenic | 35.0% | |
| TGTTATTACCTCCCTTTACA+TGG | - | chr4_1:47445356-47445375 | Msa0551480:intron | 35.0% | |
| ! | ATATTTTCTTACCCCATCCT+CGG | - | chr4_1:47445419-47445438 | Msa0551480:CDS | 35.0% |
| ! | AATTTCATTTTCCGAGGATG+GGG | + | chr4_1:47445433-47445452 | None:intergenic | 35.0% |
| ! | GAATTTCATTTTCCGAGGAT+GGG | + | chr4_1:47445434-47445453 | None:intergenic | 35.0% |
| ! | TGAATTTCATTTTCCGAGGA+TGG | + | chr4_1:47445435-47445454 | None:intergenic | 35.0% |
| !! | TTGATTTGTTCCCAATACCA+TGG | + | chr4_1:47445572-47445591 | None:intergenic | 35.0% |
| GTTCCTGAACATTGTAAACA+TGG | - | chr4_1:47445904-47445923 | Msa0551480:intron | 35.0% | |
| TAGCCATGTTTACAATGTTC+AGG | + | chr4_1:47445910-47445929 | None:intergenic | 35.0% | |
| TGGCTAATTCTATCCAGAAA+TGG | - | chr4_1:47445924-47445943 | Msa0551480:intron | 35.0% | |
| GGCTAATTCTATCCAGAAAT+GGG | - | chr4_1:47445925-47445944 | Msa0551480:intron | 35.0% | |
| ATAGTGATGATAAAGCGGAA+CGG | - | chr4_1:47446192-47446211 | Msa0551480:intron | 35.0% | |
| ! | TGGCATTGAATGGTATCAAA+AGG | + | chr4_1:47446223-47446242 | None:intergenic | 35.0% |
| ! | ATTTCAGGTATGGCATTGAA+TGG | + | chr4_1:47446233-47446252 | None:intergenic | 35.0% |
| GACTAATTCTATCCAGAAAC+GGG | - | chr4_1:47446759-47446778 | Msa0551480:intron | 35.0% | |
| TTAAAGACTCCCGTGAATTT+CGG | + | chr4_1:47446875-47446894 | None:intergenic | 35.0% | |
| ! | TGGCATTGAATGGTATCAAA+AGG | + | chr4_1:47446223-47446242 | None:intergenic | 35.0% |
| !! | TTGATTTGTTCCCAATACCA+CGG | + | chr4_1:47445572-47445591 | None:intergenic | 35.0% |
| !! | ATAGCTCTATTGCTATTTCG+CGG | - | chr4_1:47447520-47447539 | Msa0551480:intron | 35.0% |
| TCACTTTCATTACATCGATG+TGG | + | chr4_1:47447552-47447571 | None:intergenic | 35.0% | |
| CATCGATGTAATGAAAGTGA+TGG | - | chr4_1:47447552-47447571 | Msa0551480:intron | 35.0% | |
| !! | GAAAACGAGTTGATTATTCG+GGG | + | chr4_1:47447599-47447618 | None:intergenic | 35.0% |
| !! | GGAAAACGAGTTGATTATTC+GGG | + | chr4_1:47447600-47447619 | None:intergenic | 35.0% |
| ! | ATTATCAAGGAGTGTATCCA+CGG | - | chr4_1:47447722-47447741 | Msa0551480:intron | 35.0% |
| GTTCCTGAACATTGTAAACA+TGG | - | chr4_1:47445904-47445923 | Msa0551480:intron | 35.0% | |
| TAGCCATGTTTACAATGTTC+AGG | + | chr4_1:47445910-47445929 | None:intergenic | 35.0% | |
| TGGCTAATTCTATCCAGAAA+CGG | - | chr4_1:47445924-47445943 | Msa0551480:intron | 35.0% | |
| TTAAAGACTCCCGTGAATTT+CGG | + | chr4_1:47446875-47446894 | None:intergenic | 35.0% | |
| ATAGTGATGATAAAGCGGAA+CGG | - | chr4_1:47446192-47446211 | Msa0551480:intron | 35.0% | |
| ! | TGGCATTGAATGGTATCAAA+AGG | + | chr4_1:47446223-47446242 | None:intergenic | 35.0% |
| !! | TTGATTTGTTCCCAATACCT+CGG | + | chr4_1:47448324-47448343 | Msa0551490:intron | 35.0% |
| !!! | CATGAATTTTGGGTTTGTTG+TGG | + | chr4_1:47448809-47448828 | Msa0551490:intron | 35.0% |
| CACAACAAACCCAAAATTCA+TGG | - | chr4_1:47448807-47448826 | Msa0551480:intron | 35.0% | |
| ATGGGAGTCTTAAAGTCATA+AGG | - | chr4_1:47448826-47448845 | Msa0551480:intron | 35.0% | |
| ATAGTGATGATAAAGCGGAA+CGG | - | chr4_1:47446192-47446211 | Msa0551480:intron | 35.0% | |
| ! | TGGCATTGAATGGTATCAAA+AGG | + | chr4_1:47446223-47446242 | None:intergenic | 35.0% |
| ATGGTTCTTATAACACCCAA+AGG | - | chr4_1:47449152-47449171 | Msa0551480:intron | 35.0% | |
| TAACACCCAAAGGACATTTA+AGG | - | chr4_1:47449162-47449181 | Msa0551480:intron | 35.0% | |
| AACACCCAAAGGACATTTAA+GGG | - | chr4_1:47449163-47449182 | Msa0551480:intron | 35.0% | |
| GAAAAAAGGGAAAGGAGAAA+GGG | + | chr4_1:47449485-47449504 | Msa0551490:intron | 35.0% | |
| AGAAAAAAGGGAAAGGAGAA+AGG | + | chr4_1:47449486-47449505 | Msa0551490:intron | 35.0% | |
| CTCTTAACTGGTAGCTATTT+CGG | + | chr4_1:47449803-47449822 | Msa0551490:intron | 35.0% | |
| TTATGGGTTTCATGTGATAG+AGG | + | chr4_1:47450427-47450446 | Msa0551490:CDS | 35.0% | |
| ! | CTGATTGGTTGAAATTGGTA+TGG | + | chr4_1:47450465-47450484 | Msa0551490:intron | 35.0% |
| CATCAGATGCAAAGAAATGA+TGG | - | chr4_1:47450507-47450526 | Msa0551480:intron | 35.0% | |
| CACAAATAAGAGGTTAAGGT+TGG | + | chr4_1:47450604-47450623 | Msa0551490:intron | 35.0% | |
| TGAAAAGCTGCACAAATAAG+AGG | + | chr4_1:47450614-47450633 | Msa0551490:intron | 35.0% | |
| ! | GATGATGAAGAGAGGTATAT+TGG | + | chr4_1:47450690-47450709 | Msa0551490:intron | 35.0% |
| TTATTTGTGAAACACTCCCT+GGG | + | chr4_1:47450770-47450789 | Msa0551490:intron | 35.0% | |
| CTAAGAAATGGAAGAGAACT+TGG | + | chr4_1:47450911-47450930 | Msa0551490:intron | 35.0% | |
| ! | GATATTAGCTTATGGCCATT+TGG | + | chr4_1:47451051-47451070 | Msa0551490:intron | 35.0% |
| TGGCCATAAGCTAATATCTT+AGG | - | chr4_1:47451053-47451072 | Msa0551480:intron | 35.0% | |
| ! | CAGCCTAAGATATTAGCTTA+TGG | + | chr4_1:47451059-47451078 | Msa0551490:intron | 35.0% |
| TGCCTCTTCAAATTCTTGAA+CGG | - | chr4_1:47451130-47451149 | Msa0551480:intron | 35.0% | |
| ! | ACCTGAAGCTTTGTGTTATT+GGG | - | chr4_1:47451155-47451174 | Msa0551480:intron | 35.0% |
| AAGTTTGGGAGTTGAAATTC+TGG | + | chr4_1:47451534-47451553 | Msa0551490:CDS | 35.0% | |
| ! | AACTCCCAAACTTTCTTTTG+AGG | - | chr4_1:47451541-47451560 | Msa0551480:intron | 35.0% |
| GATCTCCTCAAAAGAAAGTT+TGG | + | chr4_1:47451549-47451568 | Msa0551490:CDS | 35.0% | |
| ! | AAGTAGCTTGCACAAATTTG+AGG | - | chr4_1:47451606-47451625 | Msa0551480:intron | 35.0% |
| TACGATGCAGATAAAAGAAC+CGG | + | chr4_1:47451785-47451804 | Msa0551490:intron | 35.0% | |
| ATTACACTCTTTAGTCCACA+TGG | - | chr4_1:47451809-47451828 | Msa0551480:intron | 35.0% | |
| !!! | AGTCCACATGGTGAATTTTT+TGG | - | chr4_1:47451821-47451840 | Msa0551480:intron | 35.0% |
| CTTCCAAAAAATTCACCATG+TGG | + | chr4_1:47451827-47451846 | Msa0551490:intron | 35.0% | |
| GATTCTGCTTTATAACTGAG+GGG | + | chr4_1:47451898-47451917 | Msa0551490:intron | 35.0% | |
| CTGATTCTGCTTTATAACTG+AGG | + | chr4_1:47451900-47451919 | Msa0551490:intron | 35.0% | |
| ACATAATTAGCTACATGGTG+TGG | + | chr4_1:47452070-47452089 | Msa0551490:CDS | 35.0% | |
| ! | CTATTTGAGCTTTGTAGGTT+CGG | - | chr4_1:47452149-47452168 | Msa0551480:intron | 35.0% |
| ! | TATTTGAGCTTTGTAGGTTC+GGG | - | chr4_1:47452150-47452169 | Msa0551480:intron | 35.0% |
| GAGATTATGACATAGATGCA+AGG | + | chr4_1:47452183-47452202 | Msa0551490:intron | 35.0% | |
| CTTTACTTCCAGTCACAATT+AGG | + | chr4_1:47452224-47452243 | Msa0551490:CDS | 35.0% | |
| TTATCAACGTATAAGGACAC+CGG | + | chr4_1:47452269-47452288 | Msa0551490:CDS | 35.0% | |
| TTGGTACTCTCCATAAGATA+CGG | - | chr4_1:47452536-47452555 | Msa0551480:intron | 35.0% | |
| TCTCTGTGATCATACTCTTA+AGG | - | chr4_1:47452730-47452749 | Msa0551480:intron | 35.0% | |
| TGTGGAGTATAGATGTCTTT+CGG | - | chr4_1:47452753-47452772 | Msa0551480:intron | 35.0% | |
| TAATGTAAGTAGTCTTCCCT+CGG | + | chr4_1:47452889-47452908 | Msa0551490:intron | 35.0% | |
| GAAGACTACTTACATTACAC+TGG | - | chr4_1:47452892-47452911 | Msa0551480:intron | 35.0% | |
| ! | AGTGCTTTGTGTTTTCTTGA+TGG | - | chr4_1:47453226-47453245 | Msa0551480:intron | 35.0% |
| !! | AACTTTAAGAGCTCTGGATT+CGG | - | chr4_1:47453622-47453641 | Msa0551480:intron | 35.0% |
| !! | TGGCAGATTACTTACTTTTG+GGG | + | chr4_1:47445329-47445348 | None:intergenic | 35.0% |
| !! | CTGGCAGATTACTTACTTTT+GGG | + | chr4_1:47445330-47445349 | None:intergenic | 35.0% |
| ! | TCTGGCAGATTACTTACTTT+TGG | + | chr4_1:47445331-47445350 | None:intergenic | 35.0% |
| GGAGGTAATAACAATTGATC+TGG | + | chr4_1:47445349-47445368 | None:intergenic | 35.0% | |
| TGTTATTACCTCCCTTTACA+TGG | - | chr4_1:47445356-47445375 | Msa0551480:intron | 35.0% | |
| ! | ATATTTTCTTACCCCATCCT+CGG | - | chr4_1:47445419-47445438 | Msa0551480:CDS | 35.0% |
| ! | TAGTTTCATTTTCCGAGGAT+GGG | + | chr4_1:47453830-47453849 | None:intergenic | 35.0% |
| ! | TTAGTTTCATTTTCCGAGGA+TGG | + | chr4_1:47453831-47453850 | None:intergenic | 35.0% |
| !! | TTGATTTGTTCCCAATACCA+CGG | + | chr4_1:47445572-47445591 | None:intergenic | 35.0% |
| TATAAAGCTTCCGGTAATCT+CGG | + | chr4_1:47454303-47454322 | None:intergenic | 35.0% | |
| GTTCCTGAACATTGTAAACA+TGG | - | chr4_1:47445904-47445923 | Msa0551480:intron | 35.0% | |
| TAGCCATGTTTACAATGTTC+AGG | + | chr4_1:47445910-47445929 | None:intergenic | 35.0% | |
| TGGCTAATTCTATCCAGAAA+CGG | - | chr4_1:47445924-47445943 | Msa0551480:intron | 35.0% | |
| TTAAAGACTCCCGTGAATTT+CGG | + | chr4_1:47446875-47446894 | None:intergenic | 35.0% | |
| ACCGCTTAATTACAAGTTCA+CGG | - | chr4_1:47454579-47454598 | Msa0551480:intron | 35.0% | |
| ATGAAGTCAAGGACTTATTC+AGG | + | chr4_1:47454627-47454646 | None:intergenic | 35.0% | |
| AAACAGAATGAACAGCATTG+AGG | + | chr4_1:47444818-47444837 | None:intergenic | 35.0% | |
| !! | ACTATATTTTCTGAAGGGTG+AGG | - | chr4_1:47455085-47455104 | Msa0551480:intron | 35.0% |
| GAGGAACTGAGAAAACTTAT+CGG | - | chr4_1:47455104-47455123 | Msa0551480:intron | 35.0% | |
| GAACTGCATTCAATGTAAAC+TGG | + | chr4_1:47455134-47455153 | None:intergenic | 35.0% | |
| ATGCAGTTCCAAAACACAAA+AGG | - | chr4_1:47455145-47455164 | Msa0551480:intron | 35.0% | |
| TGAAGATCACAAAATGGAAC+AGG | + | chr4_1:47455341-47455360 | None:intergenic | 35.0% | |
| AAGGACTGAAGATCACAAAA+TGG | + | chr4_1:47455347-47455366 | None:intergenic | 35.0% | |
| AACATCAAGCTATTTGTCTC+TGG | - | chr4_1:47455508-47455527 | Msa0551480:intron | 35.0% | |
| GTACAACTATTGTGTTTCTC+TGG | - | chr4_1:47455575-47455594 | Msa0551480:intron | 35.0% | |
| TAACTAAGCCAACTGAACTT+TGG | + | chr4_1:47455844-47455863 | None:intergenic | 35.0% | |
| ! | GCAGTAGTCATAAGGTTTTA+TGG | + | chr4_1:47455873-47455892 | None:intergenic | 35.0% |
| CTACAGGTGAAAACTGAATG+AGG | + | chr4_1:47443324-47443343 | None:intergenic | 40.0% | |
| CTACAGGTGAAAACTGAATG+AGG | + | chr4_1:47443324-47443343 | None:intergenic | 40.0% | |
| TGTATGTATCAGGTATCTCC+AGG | - | chr4_1:47443555-47443574 | Msa0551480:three_prime_UTR | 40.0% | |
| !!! | TTTTGTAGTTCTGGATCGAG+GGG | - | chr4_1:47443516-47443535 | Msa0551480:three_prime_UTR | 40.0% |
| GCAGGGATATTGTTTGTATC+AGG | - | chr4_1:47443710-47443729 | Msa0551480:three_prime_UTR | 40.0% | |
| ! | GCAGAGATGTTGTTTGTATC+AGG | - | chr4_1:47444040-47444059 | Msa0551480:intron | 40.0% |
| CTCAAACCTTGAAAAGTTGG+GGG | + | chr4_1:47444288-47444307 | None:intergenic | 40.0% | |
| GTGCAAAATTGCAGATGGAA+AGG | + | chr4_1:47444430-47444449 | None:intergenic | 40.0% | |
| GTGTGTTTGAAGACACTTGA+AGG | - | chr4_1:47444679-47444698 | Msa0551480:intron | 40.0% | |
| !!! | AGTGCTTGGTGTTTTCTTGA+TGG | - | chr4_1:47444850-47444869 | Msa0551480:intron | 40.0% |
| ! | TCTTGATGGCTACAATGCTA+AGG | - | chr4_1:47444864-47444883 | Msa0551480:intron | 40.0% |
| ! | GTTTGATGGCACTTCTTGAT+CGG | - | chr4_1:47445014-47445033 | Msa0551480:intron | 40.0% |
| ! | TTTGATGGCACTTCTTGATC+GGG | - | chr4_1:47445015-47445034 | Msa0551480:intron | 40.0% |
| !! | AGCTTTAAGAGCTCTGGATT+CGG | - | chr4_1:47445226-47445245 | Msa0551480:intron | 40.0% |
| ATGAGCATCTATCTCTTCCT+CGG | + | chr4_1:47445279-47445298 | None:intergenic | 40.0% | |
| TCATCCTGTCCACAAATACA+AGG | - | chr4_1:47445295-47445314 | Msa0551480:intron | 40.0% | |
| GAAACCTTGTATTTGTGGAC+AGG | + | chr4_1:47445302-47445321 | None:intergenic | 40.0% | |
| GTCCACAAATACAAGGTTTC+TGG | - | chr4_1:47445302-47445321 | Msa0551480:intron | 40.0% | |
| GACCAGAAACCTTGTATTTG+TGG | + | chr4_1:47445307-47445326 | None:intergenic | 40.0% | |
| GTCAAAATCCATGTAAAGGG+AGG | + | chr4_1:47445367-47445386 | None:intergenic | 40.0% | |
| TTCATTCTGTGATACGCACT+TGG | + | chr4_1:47445725-47445744 | None:intergenic | 40.0% | |
| AATTTCTGCAGTTACACCTG+AGG | - | chr4_1:47445821-47445840 | Msa0551480:CDS | 40.0% | |
| TTAAAGACTCCCCTGAACTT+CGG | + | chr4_1:47446041-47446060 | None:intergenic | 40.0% | |
| AGGGGAGTCTTTAAGTCATA+AGG | - | chr4_1:47446047-47446066 | Msa0551480:intron | 40.0% | |
| !! | TTGATTTGTTCCCACTACCA+CGG | + | chr4_1:47446383-47446402 | None:intergenic | 40.0% |
| TTCATTCTGTGATACGCACT+TGG | + | chr4_1:47445725-47445744 | None:intergenic | 40.0% | |
| CACAACAAACCCGAAATTCA+CGG | - | chr4_1:47446862-47446881 | Msa0551480:intron | 40.0% | |
| ACAACAAACCCGAAATTCAC+GGG | - | chr4_1:47446863-47446882 | Msa0551480:intron | 40.0% | |
| TAAAGACTCCCGTGAATTTC+GGG | + | chr4_1:47446874-47446893 | None:intergenic | 40.0% | |
| ACGGGAGTCTTTAAGTCATA+AGG | - | chr4_1:47446881-47446900 | Msa0551480:intron | 40.0% | |
| TGAACCCAGTGATGATAAAG+CGG | - | chr4_1:47447012-47447031 | Msa0551480:intron | 40.0% | |
| CATTCCGCTTTATCATCACT+GGG | + | chr4_1:47447019-47447038 | None:intergenic | 40.0% | |
| TTCATTCTGTGATACGCAGT+TGG | + | chr4_1:47447383-47447402 | None:intergenic | 40.0% | |
| !! | TAGCTCTATTGCTATTTCGC+GGG | - | chr4_1:47447521-47447540 | Msa0551480:intron | 40.0% |
| TTATTATGACCGTCCCTCAT+TGG | - | chr4_1:47447684-47447703 | Msa0551480:intron | 40.0% | |
| GTGGATACACTCCTTGATAA+TGG | + | chr4_1:47447723-47447742 | Msa0551490:CDS | 40.0% | |
| AAAATTGGTACAAGAAGCCG+TGG | + | chr4_1:47447742-47447761 | Msa0551490:CDS | 40.0% | |
| TCTTGACACATTAACACCTG+AGG | - | chr4_1:47447762-47447781 | Msa0551480:intron | 40.0% | |
| ! | ATGTAGCCTCGAAGCTTTTT+AGG | - | chr4_1:47447790-47447809 | Msa0551480:intron | 40.0% |
| TTAGGAGGAACAGAGATTGT+CGG | - | chr4_1:47447808-47447827 | Msa0551480:intron | 40.0% | |
| GGCTAATTCTATCCAGAAAC+GGG | - | chr4_1:47447866-47447885 | Msa0551480:CDS | 40.0% | |
| CACAACAAACCCGAAATTCA+CGG | - | chr4_1:47446862-47446881 | Msa0551480:intron | 40.0% | |
| ACAACAAACCCGAAATTCAC+GGG | - | chr4_1:47446863-47446882 | Msa0551480:intron | 40.0% | |
| TAAAGACTCCCGTGAATTTC+GGG | + | chr4_1:47446874-47446893 | None:intergenic | 40.0% | |
| ACGGGAGTCTTTAAGTCATA+AGG | - | chr4_1:47446881-47446900 | Msa0551480:intron | 40.0% | |
| ! | AATCTATAGGCCGAGGTATT+GGG | - | chr4_1:47448311-47448330 | Msa0551480:intron | 40.0% |
| TTCATTCTGTGATACGCACT+TGG | + | chr4_1:47445725-47445744 | None:intergenic | 40.0% | |
| TATGTAACCTCGAAGCTTTG+TGG | - | chr4_1:47448627-47448646 | Msa0551480:intron | 40.0% | |
| ! | ATGTAACCTCGAAGCTTTGT+GGG | - | chr4_1:47448628-47448647 | Msa0551480:intron | 40.0% |
| GTTCCTGAACATTGTAAACG+TGG | - | chr4_1:47448683-47448702 | Msa0551480:intron | 40.0% | |
| TAGCCACGTTTACAATGTTC+AGG | + | chr4_1:47448689-47448708 | Msa0551490:intron | 40.0% | |
| TGGCTAATTCAGTCCAGAAA+CGG | - | chr4_1:47448703-47448722 | Msa0551480:intron | 40.0% | |
| TGAACTTAATTTCGGAGGCA+CGG | - | chr4_1:47449285-47449304 | Msa0551480:intron | 40.0% | |
| ! | TTAACTGGTAGCTATTTCGG+TGG | + | chr4_1:47449800-47449819 | Msa0551490:intron | 40.0% |
| TACAAGTTACTGCCTATAGC+AGG | + | chr4_1:47449849-47449868 | Msa0551490:intron | 40.0% | |
| GTTTACTACTCATCTTGGCA+TGG | - | chr4_1:47449932-47449951 | Msa0551480:intron | 40.0% | |
| GATTGGATGATGTGGATGAT+AGG | - | chr4_1:47449978-47449997 | Msa0551480:intron | 40.0% | |
| GTTGTAGCACTGTTGTATAG+CGG | + | chr4_1:47450154-47450173 | Msa0551490:intron | 40.0% | |
| TGTCTATGCTACAGAGCTAT+AGG | - | chr4_1:47450252-47450271 | Msa0551480:intron | 40.0% | |
| GTCTATGCTACAGAGCTATA+GGG | - | chr4_1:47450253-47450272 | Msa0551480:intron | 40.0% | |
| GCTGCACAAATAAGAGGTTA+AGG | + | chr4_1:47450608-47450627 | Msa0551490:intron | 40.0% | |
| AGCATGGTTGGAAAAAATGG+TGG | + | chr4_1:47450647-47450666 | Msa0551490:intron | 40.0% | |
| ! | AGCATTCACAAAAGCATGGT+TGG | + | chr4_1:47450659-47450678 | Msa0551490:intron | 40.0% |
| ! | ACCATGCTTTTGTGAATGCT+TGG | - | chr4_1:47450659-47450678 | Msa0551480:intron | 40.0% |
| ! | CCATGCTTTTGTGAATGCTT+GGG | - | chr4_1:47450660-47450679 | Msa0551480:intron | 40.0% |
| ! | CATGCTTTTGTGAATGCTTG+GGG | - | chr4_1:47450661-47450680 | Msa0551480:intron | 40.0% |
| !! | AGAAGCTTGATGATGAAGAG+AGG | + | chr4_1:47450698-47450717 | Msa0551490:intron | 40.0% |
| TCAGGTTATTGCATATTCCC+AGG | - | chr4_1:47450750-47450769 | Msa0551480:intron | 40.0% | |
| CAGGTTATTGCATATTCCCA+GGG | - | chr4_1:47450751-47450770 | Msa0551480:intron | 40.0% | |
| CTTATTTGTGAAACACTCCC+TGG | + | chr4_1:47450771-47450790 | Msa0551490:intron | 40.0% | |
| CAGAGACAAATCAGAACAGT+GGG | + | chr4_1:47450868-47450887 | Msa0551490:intron | 40.0% | |
| ACAGAGACAAATCAGAACAG+TGG | + | chr4_1:47450869-47450888 | Msa0551490:intron | 40.0% | |
| GACCGTTCAAGAATTTGAAG+AGG | + | chr4_1:47451135-47451154 | Msa0551490:intron | 40.0% | |
| ! | CACCTGAAGCTTTGTGTTAT+TGG | - | chr4_1:47451154-47451173 | Msa0551480:intron | 40.0% |
| TCCCAATAACACAAAGCTTC+AGG | + | chr4_1:47451159-47451178 | Msa0551490:intron | 40.0% | |
| ! | CCATGTTATATTGTGCCGTT+AGG | + | chr4_1:47451319-47451338 | Msa0551490:CDS | 40.0% |
| CCTAACGGCACAATATAACA+TGG | - | chr4_1:47451316-47451335 | Msa0551480:intron | 40.0% | |
| TAAACAGGAAGATACCAGGA+GGG | + | chr4_1:47451443-47451462 | Msa0551490:CDS | 40.0% | |
| ATAAACAGGAAGATACCAGG+AGG | + | chr4_1:47451444-47451463 | Msa0551490:CDS | 40.0% | |
| TCATTATCTGCTGCTAGTTC+CGG | - | chr4_1:47451763-47451782 | Msa0551480:intron | 40.0% | |
| CTGATGGTACAGTCAAAAAG+TGG | + | chr4_1:47451858-47451877 | Msa0551490:intron | 40.0% | |
| TACCATCAGTTCAAAAGTCC+AGG | - | chr4_1:47451869-47451888 | Msa0551480:intron | 40.0% | |
| ! | TACCTGGACTTTTGAACTGA+TGG | + | chr4_1:47451874-47451893 | Msa0551490:intron | 40.0% |
| TTTATAACTGAGGGGATACC+TGG | + | chr4_1:47451890-47451909 | Msa0551490:intron | 40.0% | |
| CTTCCAGTCACAATTAGGTA+TGG | + | chr4_1:47452219-47452238 | Msa0551490:CDS | 40.0% | |
| ATGACCTTAACACAGTGCAT+TGG | + | chr4_1:47452308-47452327 | Msa0551490:CDS | 40.0% | |
| ! | GTTAGGTTGTTGGAATCAGA+AGG | - | chr4_1:47452363-47452382 | Msa0551480:intron | 40.0% |
| TCAGAAGGTCCAAGTTGTAT+TGG | - | chr4_1:47452378-47452397 | Msa0551480:intron | 40.0% | |
| !! | ATACCGACTCCAATACAACT+TGG | + | chr4_1:47452390-47452409 | Msa0551490:CDS | 40.0% |
| AGTTGTATTGGAGTCGGTAT+AGG | - | chr4_1:47452390-47452409 | Msa0551480:intron | 40.0% | |
| !! | GTCGCGCTTTCTTTTTGAAA+AGG | + | chr4_1:47452442-47452461 | Msa0551490:CDS | 40.0% |
| !!! | AAGCGCGACATCTTTTTTAG+TGG | - | chr4_1:47452453-47452472 | Msa0551480:intron | 40.0% |
| !!! | ACATCTTTTTTAGTGGCAGC+AGG | - | chr4_1:47452460-47452479 | Msa0551480:intron | 40.0% |
| GTGATCATACTCTTAAGGTG+TGG | - | chr4_1:47452735-47452754 | Msa0551480:intron | 40.0% | |
| ! | CTGCTATCATTTTGTTCCGA+GGG | - | chr4_1:47452870-47452889 | Msa0551480:intron | 40.0% |
| TGTTTGGAGACTTCCAGATA+TGG | - | chr4_1:47453012-47453031 | Msa0551480:intron | 40.0% | |
| GTTTGGAGACTTCCAGATAT+GGG | - | chr4_1:47453013-47453032 | Msa0551480:intron | 40.0% | |
| CATCAGATATAGCCCATATC+TGG | + | chr4_1:47453028-47453047 | Msa0551490:intron | 40.0% | |
| ! | CAGATATGGGCTATATCTGA+TGG | - | chr4_1:47453026-47453045 | Msa0551480:intron | 40.0% |
| TCGTGTTTGAAGACACTTGA+AGG | - | chr4_1:47453057-47453076 | Msa0551480:intron | 40.0% | |
| CGTGTTTGAAGACACTTGAA+GGG | - | chr4_1:47453058-47453077 | Msa0551480:intron | 40.0% | |
| ! | TCTTGATGGCTACAATGCTA+AGG | - | chr4_1:47444864-47444883 | Msa0551480:intron | 40.0% |
| TCTTCCTGTCCACAAATACA+AGG | - | chr4_1:47453691-47453710 | Msa0551480:intron | 40.0% | |
| GAAACCTTGTATTTGTGGAC+AGG | + | chr4_1:47445302-47445321 | None:intergenic | 40.0% | |
| GTCCACAAATACAAGGTTTC+TGG | - | chr4_1:47445302-47445321 | Msa0551480:intron | 40.0% | |
| GACCAGAAACCTTGTATTTG+TGG | + | chr4_1:47445307-47445326 | None:intergenic | 40.0% | |
| GTCAAAATCCATGTAAAGGG+AGG | + | chr4_1:47445367-47445386 | None:intergenic | 40.0% | |
| ! | AGTTTCATTTTCCGAGGATG+GGG | + | chr4_1:47453829-47453848 | None:intergenic | 40.0% |
| AATCTATAGGCCGTGGTATT+GGG | - | chr4_1:47453955-47453974 | Msa0551480:intron | 40.0% | |
| TTCATTCTGTGATACGCACT+TGG | + | chr4_1:47445725-47445744 | None:intergenic | 40.0% | |
| ! | ATGTAGCCTCGAAGCTTTTT+AGG | - | chr4_1:47447790-47447809 | Msa0551480:intron | 40.0% |
| GGCTAATTCTATCCAGAAAC+GGG | - | chr4_1:47447866-47447885 | Msa0551480:CDS | 40.0% | |
| CACAACAAACCCGAAATTCA+CGG | - | chr4_1:47446862-47446881 | Msa0551480:intron | 40.0% | |
| ACAACAAACCCGAAATTCAC+GGG | - | chr4_1:47446863-47446882 | Msa0551480:intron | 40.0% | |
| TAAAGACTCCCGTGAATTTC+GGG | + | chr4_1:47446874-47446893 | None:intergenic | 40.0% | |
| ACGGGAGTCTTTAAGTCATA+AGG | - | chr4_1:47446881-47446900 | Msa0551480:intron | 40.0% | |
| CCCGTGAACTTGTAATTAAG+CGG | + | chr4_1:47454583-47454602 | None:intergenic | 40.0% | |
| CCGCTTAATTACAAGTTCAC+GGG | - | chr4_1:47454580-47454599 | Msa0551480:intron | 40.0% | |
| ACGGGAGTCTTTAAGTCATA+AGG | - | chr4_1:47446881-47446900 | Msa0551480:intron | 40.0% | |
| ! | TCTGACTAGTCATGAAGTCA+AGG | + | chr4_1:47454638-47454657 | None:intergenic | 40.0% |
| TCGTGTTTGAAGACACTTGA+AGG | - | chr4_1:47453057-47453076 | Msa0551480:intron | 40.0% | |
| CGTGTTTGAAGACACTTGAA+GGG | - | chr4_1:47453058-47453077 | Msa0551480:intron | 40.0% | |
| GTTCATTCTGTTTGTAGCTC+TGG | - | chr4_1:47454965-47454984 | Msa0551480:intron | 40.0% | |
| CCTTCACATTCTGTATCCAA+AGG | + | chr4_1:47455243-47455262 | None:intergenic | 40.0% | |
| CCTTTGGATACAGAATGTGA+AGG | - | chr4_1:47455240-47455259 | Msa0551480:intron | 40.0% | |
| !!! | TGTGAAGGCCGTTTTTGATT+CGG | - | chr4_1:47455255-47455274 | Msa0551480:intron | 40.0% |
| ! | CTTGATGGCCGAATCAAAAA+CGG | + | chr4_1:47455266-47455285 | None:intergenic | 40.0% |
| AACAAAGAGAAAGGGGCAAA+AGG | - | chr4_1:47455315-47455334 | Msa0551480:intron | 40.0% | |
| GTCCTTCGTATTGTAGTTCA+TGG | - | chr4_1:47455361-47455380 | Msa0551480:intron | 40.0% | |
| CTCCATGAACTACAATACGA+AGG | + | chr4_1:47455366-47455385 | None:intergenic | 40.0% | |
| CTTCGTATTGTAGTTCATGG+AGG | - | chr4_1:47455364-47455383 | Msa0551480:intron | 40.0% | |
| TGGCAAAAACTACCAGGAAA+TGG | + | chr4_1:47455405-47455424 | None:intergenic | 40.0% | |
| TCAGAATGGCAAAAACTACC+AGG | + | chr4_1:47455411-47455430 | None:intergenic | 40.0% | |
| ! | ACTATTTTCGACCTAGATGG+AGG | - | chr4_1:47455444-47455463 | Msa0551480:intron | 40.0% |
| CAAATGGTCATCTCCATTTG+TGG | - | chr4_1:47455623-47455642 | Msa0551480:intron | 40.0% | |
| TCATCTCCATTTGTGGACAT+GGG | - | chr4_1:47455630-47455649 | Msa0551480:intron | 40.0% | |
| GTAAAACCCATGTCCACAAA+TGG | + | chr4_1:47455639-47455658 | None:intergenic | 40.0% | |
| ACCTTGAAAAGTTGGGGGTA+GGG | + | chr4_1:47444283-47444302 | None:intergenic | 45.0% | |
| AACCTTGAAAAGTTGGGGGT+AGG | + | chr4_1:47444284-47444303 | None:intergenic | 45.0% | |
| GTTCATTCTGTTTGCAGCTC+TGG | - | chr4_1:47444825-47444844 | Msa0551480:intron | 45.0% | |
| TTCTTGGCCACACAGAACTA+CGG | - | chr4_1:47444951-47444970 | Msa0551480:intron | 45.0% | |
| ! | TATGCAACCGTAGTTCTGTG+TGG | + | chr4_1:47444961-47444980 | None:intergenic | 45.0% |
| ! | GATCGGGAGTTTGATGATCT+AGG | - | chr4_1:47445031-47445050 | Msa0551480:intron | 45.0% |
| ATCTCTTCCTCGGACATAGA+AGG | + | chr4_1:47445269-47445288 | None:intergenic | 45.0% | |
| GATATCAAATCTGCAGGCCA+TGG | - | chr4_1:47445552-47445571 | Msa0551480:intron | 45.0% | |
| AAATCTGCAGGCCATGGTAT+TGG | - | chr4_1:47445558-47445577 | Msa0551480:intron | 45.0% | |
| AATCTGCAGGCCATGGTATT+GGG | - | chr4_1:47445559-47445578 | Msa0551480:intron | 45.0% | |
| ! | ATGTAGCCTCGAAGCTTTGT+AGG | - | chr4_1:47445849-47445868 | Msa0551480:CDS | 45.0% |
| GTAGGAGGAACAGAGATTGT+CGG | - | chr4_1:47445867-47445886 | Msa0551480:CDS | 45.0% | |
| CTATGCACTAGTCCCATTTC+TGG | + | chr4_1:47445940-47445959 | None:intergenic | 45.0% | |
| TTTCACAAGAGCCTCGACTT+CGG | + | chr4_1:47445966-47445985 | None:intergenic | 45.0% | |
| CACAACAAACCCGAAGTTCA+GGG | - | chr4_1:47446028-47446047 | Msa0551480:intron | 45.0% | |
| ACAACAAACCCGAAGTTCAG+GGG | - | chr4_1:47446029-47446048 | Msa0551480:intron | 45.0% | |
| TAAAGACTCCCCTGAACTTC+GGG | + | chr4_1:47446040-47446059 | None:intergenic | 45.0% | |
| AATTTCTGCAGTTACACCCG+AGG | - | chr4_1:47446655-47446674 | Msa0551480:intron | 45.0% | |
| TCGAGGCTACATACAATCCT+CGG | + | chr4_1:47445841-47445860 | None:intergenic | 45.0% | |
| ! | ATGTAGCCTCGAAGCTTTGT+AGG | - | chr4_1:47445849-47445868 | Msa0551480:CDS | 45.0% |
| GTAGGAGGAACAGAGATTGT+CGG | - | chr4_1:47445867-47445886 | Msa0551480:CDS | 45.0% | |
| TTTCACAAGAGCCTCGACTT+CGG | + | chr4_1:47445966-47445985 | None:intergenic | 45.0% | |
| !! | CGTGAATTTCGGGTTTGTTG+TGG | + | chr4_1:47446864-47446883 | None:intergenic | 45.0% |
| CCATTCCGCTTTATCATCAC+TGG | + | chr4_1:47447020-47447039 | None:intergenic | 45.0% | |
| CCAGTGATGATAAAGCGGAA+TGG | - | chr4_1:47447017-47447036 | Msa0551480:intron | 45.0% | |
| AATCTGTAGGCCGTGGTATT+GGG | - | chr4_1:47447195-47447214 | Msa0551480:intron | 45.0% | |
| !! | AGCTCTATTGCTATTTCGCG+GGG | - | chr4_1:47447522-47447541 | Msa0551480:intron | 45.0% |
| AGATTTCGAGAGACTCTGCT+TGG | + | chr4_1:47447621-47447640 | None:intergenic | 45.0% | |
| !! | CTCCTTGATAATGGAATCCG+CGG | + | chr4_1:47447714-47447733 | Msa0551490:CDS | 45.0% |
| !! | TAGCCTCGAAGCTTTTTAGG+AGG | - | chr4_1:47447793-47447812 | Msa0551480:intron | 45.0% |
| GTTCCTCCTAAAAAGCTTCG+AGG | + | chr4_1:47447799-47447818 | Msa0551490:CDS | 45.0% | |
| TTTCACAAGAGCCTCGACTT+AGG | + | chr4_1:47445966-47445985 | None:intergenic | 45.0% | |
| !! | CGTGAATTTCGGGTTTGTTG+TGG | + | chr4_1:47446864-47446883 | None:intergenic | 45.0% |
| GAATCTATAGGCCGAGGTAT+TGG | - | chr4_1:47448310-47448329 | Msa0551480:intron | 45.0% | |
| AATTTCGGCAGTTACACCTG+AGG | - | chr4_1:47448600-47448619 | Msa0551480:intron | 45.0% | |
| CGAGGTTACATACAATCCTC+AGG | + | chr4_1:47448619-47448638 | Msa0551490:intron | 45.0% | |
| GGCTAATTCAGTCCAGAAAC+GGG | - | chr4_1:47448704-47448723 | Msa0551480:intron | 45.0% | |
| TTTCACAAGAGCCTCGACTT+CGG | + | chr4_1:47445966-47445985 | None:intergenic | 45.0% | |
| GGAAGGCAGTCAAGAAAACA+AGG | + | chr4_1:47449464-47449483 | Msa0551490:intron | 45.0% | |
| AAAGGGAAAGGAGAAAGGGA+AGG | + | chr4_1:47449481-47449500 | Msa0551490:intron | 45.0% | |
| CAGATGGAAAGGAAAGCTCA+AGG | + | chr4_1:47449566-47449585 | Msa0551490:intron | 45.0% | |
| GTGCATAATCGCAGATGGAA+AGG | + | chr4_1:47449577-47449596 | Msa0551490:intron | 45.0% | |
| TTGTCGTGCATAATCGCAGA+TGG | + | chr4_1:47449582-47449601 | Msa0551490:intron | 45.0% | |
| ATGCCTTCTGTGACACTGAT+TGG | - | chr4_1:47449961-47449980 | Msa0551480:intron | 45.0% | |
| CATCCAATCAGTGTCACAGA+AGG | + | chr4_1:47449967-47449986 | Msa0551490:intron | 45.0% | |
| ! | GTGACACTGATTGGATGATG+TGG | - | chr4_1:47449970-47449989 | Msa0551480:intron | 45.0% |
| ! | AGGATATCGTAGTCTAGCTC+TGG | - | chr4_1:47449998-47450017 | Msa0551480:intron | 45.0% |
| TGGCAACTACTGAACTACTG+TGG | - | chr4_1:47450018-47450037 | Msa0551480:intron | 45.0% | |
| GGCAACTACTGAACTACTGT+GGG | - | chr4_1:47450019-47450038 | Msa0551480:intron | 45.0% | |
| CCCAAGCATTCACAAAAGCA+TGG | + | chr4_1:47450663-47450682 | Msa0551490:intron | 45.0% | |
| AGACAAATCAGAACAGTGGG+TGG | + | chr4_1:47450865-47450884 | Msa0551490:intron | 45.0% | |
| CATGGGCCCTAACTAAGAAA+TGG | + | chr4_1:47450923-47450942 | Msa0551490:CDS | 45.0% | |
| !! | GCTTTCTGGTTTCGTCCAAA+TGG | - | chr4_1:47451033-47451052 | Msa0551480:intron | 45.0% |
| GTGAATTCAGACTCGCAAGT+GGG | + | chr4_1:47451212-47451231 | Msa0551490:intron | 45.0% | |
| TGTGAATTCAGACTCGCAAG+TGG | + | chr4_1:47451213-47451232 | Msa0551490:intron | 45.0% | |
| ACTTGCGAGTCTGAATTCAC+AGG | - | chr4_1:47451212-47451231 | Msa0551480:intron | 45.0% | |
| CTTGCGAGTCTGAATTCACA+GGG | - | chr4_1:47451213-47451232 | Msa0551480:intron | 45.0% | |
| TGCTTGGCTGACATCATCAT+GGG | + | chr4_1:47451240-47451259 | Msa0551490:intron | 45.0% | |
| TTGCTTGGCTGACATCATCA+TGG | + | chr4_1:47451241-47451260 | Msa0551490:intron | 45.0% | |
| ! | ATGATGATGTCAGCCAAGCA+AGG | - | chr4_1:47451240-47451259 | Msa0551480:intron | 45.0% |
| AAAGTGGTTCAAGAGCTGCA+TGG | + | chr4_1:47451357-47451376 | Msa0551490:CDS | 45.0% | |
| GGGTACGATGATGAAGAAAC+TGG | + | chr4_1:47451422-47451441 | Msa0551490:CDS | 45.0% | |
| AAACAGGAAGATACCAGGAG+GGG | + | chr4_1:47451442-47451461 | Msa0551490:CDS | 45.0% | |
| ! | GCTTTGTAGGTTCGGGTTTA+CGG | - | chr4_1:47452157-47452176 | Msa0551480:intron | 45.0% |
| TGGCCATACCTAATTGTGAC+TGG | - | chr4_1:47452213-47452232 | Msa0551480:intron | 45.0% | |
| GCTTCCAATGCACTGTGTTA+AGG | - | chr4_1:47452301-47452320 | Msa0551480:intron | 45.0% | |
| ACCTAACCTGTACAGCATGT+GGG | + | chr4_1:47452350-47452369 | Msa0551490:CDS | 45.0% | |
| AACCTAACCTGTACAGCATG+TGG | + | chr4_1:47452351-47452370 | Msa0551490:CDS | 45.0% | |
| ! | TGCTGTACAGGTTAGGTTGT+TGG | - | chr4_1:47452353-47452372 | Msa0551480:intron | 45.0% |
| GGTCCAAGTTGTATTGGAGT+CGG | - | chr4_1:47452384-47452403 | Msa0551480:intron | 45.0% | |
| ATAGGTCACATGTGAGCTGT+TGG | - | chr4_1:47452408-47452427 | Msa0551480:intron | 45.0% | |
| TAGATGTCTTTCGGACGATG+TGG | - | chr4_1:47452762-47452781 | Msa0551480:intron | 45.0% | |
| CCTCGGAACAAAATGATAGC+AGG | + | chr4_1:47452872-47452891 | Msa0551490:intron | 45.0% | |
| ! | CCTGCTATCATTTTGTTCCG+AGG | - | chr4_1:47452869-47452888 | Msa0551480:intron | 45.0% |
| TGTCTTCAAACACGACTCAC+GGG | + | chr4_1:47453052-47453071 | Msa0551490:intron | 45.0% | |
| GTGTCTTCAAACACGACTCA+CGG | + | chr4_1:47453053-47453072 | Msa0551490:intron | 45.0% | |
| TTCTTGGCCACACAGAACTA+CGG | - | chr4_1:47444951-47444970 | Msa0551480:intron | 45.0% | |
| ! | TATGCAACCGTAGTTCTGTG+TGG | + | chr4_1:47444961-47444980 | None:intergenic | 45.0% |
| TTCAGCTGGCACTTCTTGAT+CGG | - | chr4_1:47453408-47453427 | Msa0551480:intron | 45.0% | |
| ! | GATCGGGAGTTTGATGATCT+AGG | - | chr4_1:47445031-47445050 | Msa0551480:intron | 45.0% |
| ATCTCTTCCTCGGACATAGA+AGG | + | chr4_1:47445269-47445288 | None:intergenic | 45.0% | |
| TTCTATGTCCGAGGAAGAGA+TGG | - | chr4_1:47445268-47445287 | Msa0551480:intron | 45.0% | |
| !! | AAGAGCATCCATCTCTTCCT+CGG | + | chr4_1:47453675-47453694 | None:intergenic | 45.0% |
| GATATCGAATCTATAGGCCG+TGG | - | chr4_1:47453948-47453967 | Msa0551480:intron | 45.0% | |
| GAATCTATAGGCCGTGGTAT+TGG | - | chr4_1:47453954-47453973 | Msa0551480:intron | 45.0% | |
| AATTTCGGCAGTTACACCTG+AGG | - | chr4_1:47448600-47448619 | Msa0551480:intron | 45.0% | |
| !! | TAGCCTCGAAGCTTTTTAGG+AGG | - | chr4_1:47447793-47447812 | Msa0551480:intron | 45.0% |
| GTTCCTCCTAAAAAGCTTCG+AGG | + | chr4_1:47447799-47447818 | Msa0551490:CDS | 45.0% | |
| TTAGGAGGAACCGAGATTAC+CGG | - | chr4_1:47454290-47454309 | Msa0551480:intron | 45.0% | |
| TTTCACAAGAGCCTCGACTT+CGG | + | chr4_1:47445966-47445985 | None:intergenic | 45.0% | |
| !! | CGTGAATTTCGGGTTTGTTG+TGG | + | chr4_1:47446864-47446883 | None:intergenic | 45.0% |
| TGTCTTCAAACACGACTCAC+GGG | + | chr4_1:47453052-47453071 | Msa0551490:intron | 45.0% | |
| GTGTCTTCAAACACGACTCA+CGG | + | chr4_1:47453053-47453072 | Msa0551490:intron | 45.0% | |
| !!! | CGTTTTTGATTCGGCCATCA+AGG | - | chr4_1:47455264-47455283 | Msa0551480:intron | 45.0% |
| TGGCTGTAGAACTACCTTGA+TGG | + | chr4_1:47455281-47455300 | None:intergenic | 45.0% | |
| ACATGACAGTAGCCATTTCC+TGG | - | chr4_1:47455390-47455409 | Msa0551480:five_prime_UTR | 45.0% | |
| AGCTATTTGTCTCTGGCTGA+AGG | - | chr4_1:47455515-47455534 | Msa0551480:intron | 45.0% | |
| GTCATCTCCATTTGTGGACA+TGG | - | chr4_1:47455629-47455648 | Msa0551480:intron | 45.0% | |
| !! | GGAAGTGCTTGCAACTTATG+CGG | - | chr4_1:47455680-47455699 | Msa0551480:intron | 45.0% |
| !! | TTTATTCATATTATAAAATA+TGG | + | chr4_1:47447342-47447361 | None:intergenic | 5.0% |
| !! | TTTATTCATATTATAAAATA+TGG | + | chr4_1:47447342-47447361 | None:intergenic | 5.0% |
| !! | TTTATTCATATTATAAAATA+TGG | + | chr4_1:47447342-47447361 | None:intergenic | 5.0% |
| !! | GCAGGGGTGTTGTATGAATC+AGG | - | chr4_1:47443231-47443250 | Msa0551480:three_prime_UTR | 50.0% |
| GGATTGAGGGACACAATGCA+GGG | - | chr4_1:47443363-47443382 | Msa0551480:three_prime_UTR | 50.0% | |
| GATTGAGGGACACAATGCAG+GGG | - | chr4_1:47443364-47443383 | Msa0551480:three_prime_UTR | 50.0% | |
| !! | GCAGGGGTGTTGTATGTATC+AGG | - | chr4_1:47443380-47443399 | Msa0551480:three_prime_UTR | 50.0% |
| ! | ACCCTACCCCCAACTTTTCA+AGG | - | chr4_1:47444279-47444298 | Msa0551480:intron | 50.0% |
| ! | ATGGAAAGGCGACAAGTTGG+AGG | + | chr4_1:47444416-47444435 | None:intergenic | 50.0% |
| CAGATGGAAAGGCGACAAGT+TGG | + | chr4_1:47444419-47444438 | None:intergenic | 50.0% | |
| TGTTACCCGTGCGTTTCTTG+TGG | - | chr4_1:47444732-47444751 | Msa0551480:intron | 50.0% | |
| TCCTACCACAAGAAACGCAC+GGG | + | chr4_1:47444740-47444759 | None:intergenic | 50.0% | |
| CTCCTACCACAAGAAACGCA+CGG | + | chr4_1:47444741-47444760 | None:intergenic | 50.0% | |
| ! | GTAGTTCTGTGTGGCCAAGA+AGG | + | chr4_1:47444952-47444971 | None:intergenic | 50.0% |
| CTTGCAAGTGCTATCGATGG+AGG | + | chr4_1:47444986-47445005 | None:intergenic | 50.0% | |
| TACTGCACCTTCTATGTCCG+AGG | - | chr4_1:47445259-47445278 | Msa0551480:intron | 50.0% | |
| CGAGGCTACATACAATCCTC+AGG | + | chr4_1:47445840-47445859 | None:intergenic | 50.0% | |
| ! | TAGCCTCGAAGCTTTGTAGG+AGG | - | chr4_1:47445852-47445871 | Msa0551480:CDS | 50.0% |
| GTTCCTCCTACAAAGCTTCG+AGG | + | chr4_1:47445858-47445877 | None:intergenic | 50.0% | |
| !! | CCTGAACTTCGGGTTTGTTG+TGG | + | chr4_1:47446030-47446049 | None:intergenic | 50.0% |
| CCACAACAAACCCGAAGTTC+AGG | - | chr4_1:47446027-47446046 | Msa0551480:intron | 50.0% | |
| GATATCAAATCTGCAGGCCG+TGG | - | chr4_1:47446363-47446382 | Msa0551480:intron | 50.0% | |
| CGAGGCTACATACAATCCTC+GGG | + | chr4_1:47445840-47445859 | None:intergenic | 50.0% | |
| ! | TAGCCTCGAAGCTTTGTAGG+AGG | - | chr4_1:47445852-47445871 | Msa0551480:CDS | 50.0% |
| GTTCCTCCTACAAAGCTTCG+AGG | + | chr4_1:47445858-47445877 | None:intergenic | 50.0% | |
| CTATCCAGAAACGGGACTAG+TGG | - | chr4_1:47446767-47446786 | Msa0551480:intron | 50.0% | |
| CTATCCACTAGTCCCGTTTC+TGG | + | chr4_1:47446774-47446793 | None:intergenic | 50.0% | |
| GATATCGAATCTGTAGGCCG+TGG | - | chr4_1:47447188-47447207 | Msa0551480:intron | 50.0% | |
| GAATCTGTAGGCCGTGGTAT+TGG | - | chr4_1:47447194-47447213 | Msa0551480:intron | 50.0% | |
| GGGCGTTCTGTTATTGTCGT+AGG | + | chr4_1:47447579-47447598 | None:intergenic | 50.0% | |
| AATCCGCGGACAACCAATGA+GGG | + | chr4_1:47447700-47447719 | Msa0551490:CDS | 50.0% | |
| GTCCGCGGATTCCATTATCA+AGG | - | chr4_1:47447709-47447728 | Msa0551480:intron | 50.0% | |
| CGAGGCTACATACAATCCTC+AGG | + | chr4_1:47445840-47445859 | None:intergenic | 50.0% | |
| CTATGCACTAGTCCCGTTTC+TGG | + | chr4_1:47447881-47447900 | Msa0551490:CDS | 50.0% | |
| GTGCATAGAAGCCTAAGTCG+AGG | - | chr4_1:47447893-47447912 | Msa0551480:CDS | 50.0% | |
| GATGTCGAATCTATAGGCCG+AGG | - | chr4_1:47448304-47448323 | Msa0551480:intron | 50.0% | |
| ! | TAACCTCGAAGCTTTGTGGG+AGG | - | chr4_1:47448631-47448650 | Msa0551480:intron | 50.0% |
| CTATGCACTAGTCCCGTTTC+TGG | + | chr4_1:47447881-47447900 | Msa0551490:CDS | 50.0% | |
| CTGAACTACTGTGGGCCTAT+TGG | - | chr4_1:47450027-47450046 | Msa0551480:intron | 50.0% | |
| ! | ACTGTGGGCCTATTGGTTAG+TGG | - | chr4_1:47450034-47450053 | Msa0551480:intron | 50.0% |
| ! | CTGTGGGCCTATTGGTTAGT+GGG | - | chr4_1:47450035-47450054 | Msa0551480:intron | 50.0% |
| ! | TGTGGGCCTATTGGTTAGTG+GGG | - | chr4_1:47450036-47450055 | Msa0551480:intron | 50.0% |
| ACTCACCCCCACTAACCAAT+AGG | + | chr4_1:47450045-47450064 | Msa0551490:intron | 50.0% | |
| ATTGGTTAGTGGGGGTGAGT+TGG | - | chr4_1:47450045-47450064 | Msa0551480:intron | 50.0% | |
| TTCCAGTTCACGTGGAGATC+AGG | - | chr4_1:47450732-47450751 | Msa0551480:intron | 50.0% | |
| AACCTGATCTCCACGTGAAC+TGG | + | chr4_1:47450737-47450756 | Msa0551490:intron | 50.0% | |
| TACCGTGATCGCCAGAAATG+AGG | - | chr4_1:47450838-47450857 | Msa0551480:intron | 50.0% | |
| !! | GTCCTCATTTCTGGCGATCA+CGG | + | chr4_1:47450843-47450862 | Msa0551490:intron | 50.0% |
| GCTTGGCTGACATCATCATG+GGG | + | chr4_1:47451239-47451258 | Msa0551490:intron | 50.0% | |
| TGTCAGCCAAGCAAGGTACA+AGG | - | chr4_1:47451247-47451266 | Msa0551480:intron | 50.0% | |
| GTCAGCCAAGCAAGGTACAA+GGG | - | chr4_1:47451248-47451267 | Msa0551480:intron | 50.0% | |
| AGGTACCCTTGTACCTTGCT+TGG | + | chr4_1:47451256-47451275 | Msa0551490:intron | 50.0% | |
| TAGGCAGATTGATGGAGGCA+TGG | + | chr4_1:47451300-47451319 | Msa0551490:intron | 50.0% | |
| GCCTCCATCAATCTGCCTAA+CGG | - | chr4_1:47451301-47451320 | Msa0551480:intron | 50.0% | |
| ! | TGTGCCGTTAGGCAGATTGA+TGG | + | chr4_1:47451308-47451327 | Msa0551490:CDS | 50.0% |
| ACAATGCCCACATGCTGTAC+AGG | - | chr4_1:47452341-47452360 | Msa0551480:intron | 50.0% | |
| GATGTGGCAGCTCCAATTTG+TGG | - | chr4_1:47452778-47452797 | Msa0551480:intron | 50.0% | |
| AGCTCCAATTTGTGGCTCTC+AGG | - | chr4_1:47452786-47452805 | Msa0551480:intron | 50.0% | |
| CCAACCTGAGAGCCACAAAT+TGG | + | chr4_1:47452793-47452812 | Msa0551490:intron | 50.0% | |
| CCAATTTGTGGCTCTCAGGT+TGG | - | chr4_1:47452790-47452809 | Msa0551480:intron | 50.0% | |
| ACAAGCAGTGCGATCCTGAT+TGG | + | chr4_1:47452993-47453012 | Msa0551490:intron | 50.0% | |
| AGGATCGCACTGCTTGTGTT+TGG | - | chr4_1:47452996-47453015 | Msa0551480:intron | 50.0% | |
| TGTTACCCGTGCGTTTCTTG+TGG | - | chr4_1:47444732-47444751 | Msa0551480:intron | 50.0% | |
| TCCTACCACAAGAAACGCAC+GGG | + | chr4_1:47444740-47444759 | None:intergenic | 50.0% | |
| CTCCTACCACAAGAAACGCA+CGG | + | chr4_1:47444741-47444760 | None:intergenic | 50.0% | |
| ! | GTAGTTCTGTGTGGCCAAGA+AGG | + | chr4_1:47444952-47444971 | None:intergenic | 50.0% |
| CTTGCAAGTGCTATCGATGG+AGG | + | chr4_1:47444986-47445005 | None:intergenic | 50.0% | |
| TCAGCTGGCACTTCTTGATC+GGG | - | chr4_1:47453409-47453428 | Msa0551480:intron | 50.0% | |
| TACTGCACCTTCTATGTCCG+AGG | - | chr4_1:47445259-47445278 | Msa0551480:intron | 50.0% | |
| CGAGGCTACATACAATCCTC+AGG | + | chr4_1:47445840-47445859 | None:intergenic | 50.0% | |
| CTATGCACTAGTCCCGTTTC+TGG | + | chr4_1:47447881-47447900 | Msa0551490:CDS | 50.0% | |
| TGTTACCCGTGCGTTTCTTG+TGG | - | chr4_1:47444732-47444751 | Msa0551480:intron | 50.0% | |
| TCCTACCACAAGAAACGCAC+GGG | + | chr4_1:47444740-47444759 | None:intergenic | 50.0% | |
| CTCCTACCACAAGAAACGCA+CGG | + | chr4_1:47444741-47444760 | None:intergenic | 50.0% | |
| !! | TTGTAGCTCTGGCTAGTGCT+TGG | - | chr4_1:47454976-47454995 | Msa0551480:intron | 50.0% |
| TTAACGCGGTCAGTTGGACA+TGG | + | chr4_1:47455475-47455494 | None:intergenic | 50.0% | |
| ! | CAAGCTTTAACGCGGTCAGT+TGG | + | chr4_1:47455481-47455500 | None:intergenic | 50.0% |
| GCTTGCAACTTATGCGGCTT+TGG | - | chr4_1:47455686-47455705 | Msa0551480:intron | 50.0% | |
| CGGATTGAGGGACACAATGC+AGG | - | chr4_1:47443362-47443381 | Msa0551480:three_prime_UTR | 55.0% | |
| !! | GCTGGGGTGCTGTATGTATC+AGG | - | chr4_1:47443545-47443564 | Msa0551480:three_prime_UTR | 55.0% |
| GATCGAGGGGACACATTGCA+GGG | - | chr4_1:47443693-47443712 | Msa0551480:three_prime_UTR | 55.0% | |
| TAGATCTCGGGACACGATGC+AGG | - | chr4_1:47443862-47443881 | Msa0551480:intron | 55.0% | |
| AGATCTCGGGACACGATGCA+GGG | - | chr4_1:47443863-47443882 | Msa0551480:intron | 55.0% | |
| ACCCGTGCGTTTCTTGTGGT+AGG | - | chr4_1:47444736-47444755 | Msa0551480:intron | 55.0% | |
| CGTGCGTTTCTTGTGGTAGG+AGG | - | chr4_1:47444739-47444758 | Msa0551480:intron | 55.0% | |
| ! | TTGCAGCTCTGGCTAGTGCT+TGG | - | chr4_1:47444836-47444855 | Msa0551480:intron | 55.0% |
| CGGCTTGCAAGTGCTATCGA+TGG | + | chr4_1:47444989-47445008 | None:intergenic | 55.0% | |
| TCGATAGCACTTGCAAGCCG+AGG | - | chr4_1:47444989-47445008 | Msa0551480:intron | 55.0% | |
| CGATAGCACTTGCAAGCCGA+GGG | - | chr4_1:47444990-47445009 | Msa0551480:intron | 55.0% | |
| ! | GAAGTGCCATCAAACGCCCT+CGG | + | chr4_1:47445009-47445028 | None:intergenic | 55.0% |
| GTGCATAGAAGCCGAAGTCG+AGG | - | chr4_1:47445952-47445971 | Msa0551480:intron | 55.0% | |
| AAATCTGCAGGCCGTGGTAG+TGG | - | chr4_1:47446369-47446388 | Msa0551480:intron | 55.0% | |
| AATCTGCAGGCCGTGGTAGT+GGG | - | chr4_1:47446370-47446389 | Msa0551480:intron | 55.0% | |
| GTGGATAGAAGCCGAAGTCG+AGG | - | chr4_1:47446786-47446805 | Msa0551480:intron | 55.0% | |
| GAATCCGCGGACAACCAATG+AGG | + | chr4_1:47447701-47447720 | Msa0551490:CDS | 55.0% | |
| GTTCCTCCCACAAAGCTTCG+AGG | + | chr4_1:47448637-47448656 | Msa0551490:intron | 55.0% | |
| GTGGGAGGAACAGAGATTGC+CGG | - | chr4_1:47448646-47448665 | Msa0551480:intron | 55.0% | |
| GTGCATAGAAGCCGAAGTCG+AGG | - | chr4_1:47445952-47445971 | Msa0551480:intron | 55.0% | |
| ! | GTGGGCCTATTGGTTAGTGG+GGG | - | chr4_1:47450037-47450056 | Msa0551480:intron | 55.0% |
| CAGTGGGTGGTCCTCATTTC+TGG | + | chr4_1:47450852-47450871 | Msa0551490:intron | 55.0% | |
| GCCGTTAGGCAGATTGATGG+AGG | + | chr4_1:47451305-47451324 | Msa0551490:CDS | 55.0% | |
| CTTCATCATCGTACCCCTCC+TGG | - | chr4_1:47451426-47451445 | Msa0551480:intron | 55.0% | |
| GCCCACATGCTGTACAGGTT+AGG | - | chr4_1:47452346-47452365 | Msa0551480:intron | 55.0% | |
| ACCCGTGCGTTTCTTGTGGT+AGG | - | chr4_1:47444736-47444755 | Msa0551480:intron | 55.0% | |
| CGTGCGTTTCTTGTGGTAGG+AGG | - | chr4_1:47444739-47444758 | Msa0551480:intron | 55.0% | |
| CGGCTTGCAAGTGCTATCGA+TGG | + | chr4_1:47444989-47445008 | None:intergenic | 55.0% | |
| TCGATAGCACTTGCAAGCCG+AGG | - | chr4_1:47444989-47445008 | Msa0551480:intron | 55.0% | |
| CGATAGCACTTGCAAGCCGA+GGG | - | chr4_1:47444990-47445009 | Msa0551480:intron | 55.0% | |
| GTGCATAGAAGCCGAAGTCG+AGG | - | chr4_1:47445952-47445971 | Msa0551480:intron | 55.0% | |
| ACCCGTGCGTTTCTTGTGGT+AGG | - | chr4_1:47444736-47444755 | Msa0551480:intron | 55.0% | |
| CGTGCGTTTCTTGTGGTAGG+AGG | - | chr4_1:47444739-47444758 | Msa0551480:intron | 55.0% | |
| ACATGGCGGTTCCTCCATCT+AGG | + | chr4_1:47455458-47455477 | None:intergenic | 55.0% | |
| TGGATCGTGGGACACGATGC+AGG | - | chr4_1:47443213-47443232 | Msa0551480:three_prime_UTR | 60.0% | |
| GGATCGTGGGACACGATGCA+GGG | - | chr4_1:47443214-47443233 | Msa0551480:three_prime_UTR | 60.0% | |
| GATCGTGGGACACGATGCAG+GGG | - | chr4_1:47443215-47443234 | Msa0551480:three_prime_UTR | 60.0% | |
| TGGATCGAGGGACACGATGC+TGG | - | chr4_1:47443527-47443546 | Msa0551480:three_prime_UTR | 60.0% | |
| GGATCGAGGGACACGATGCT+GGG | - | chr4_1:47443528-47443547 | Msa0551480:three_prime_UTR | 60.0% | |
| GATCGAGGGACACGATGCTG+GGG | - | chr4_1:47443529-47443548 | Msa0551480:three_prime_UTR | 60.0% | |
| GGATCGAGGGGACACATTGC+AGG | - | chr4_1:47443692-47443711 | Msa0551480:three_prime_UTR | 60.0% | |
| GATCTCGGGACACGATGCAG+GGG | - | chr4_1:47443864-47443883 | Msa0551480:intron | 60.0% | |
| GGCTGCTGCTGCATGAGCTT+GGG | + | chr4_1:47444924-47444943 | None:intergenic | 60.0% | |
| TGGCTGCTGCTGCATGAGCT+TGG | + | chr4_1:47444925-47444944 | None:intergenic | 60.0% | |
| TGTGTGGCCAAGAAGGCCAC+TGG | + | chr4_1:47444945-47444964 | None:intergenic | 60.0% | |
| !! | TGCAAGCCGAGGGCGTTTGA+TGG | - | chr4_1:47445000-47445019 | Msa0551480:intron | 60.0% |
| CGCGGACAACCAATGAGGGA+CGG | + | chr4_1:47447696-47447715 | Msa0551490:CDS | 60.0% | |
| ! | CGTCCCTCATTGGTTGTCCG+CGG | - | chr4_1:47447694-47447713 | Msa0551480:intron | 60.0% |
| GGCTGCTGCTGCATGAGCTT+GGG | + | chr4_1:47444924-47444943 | None:intergenic | 60.0% | |
| TGGCTGCTGCTGCATGAGCT+TGG | + | chr4_1:47444925-47444944 | None:intergenic | 60.0% | |
| TGTGTGGCCAAGAAGGCCAC+TGG | + | chr4_1:47444945-47444964 | None:intergenic | 60.0% | |
| GCAGGGTCTCAGACTTCAGC+TGG | - | chr4_1:47453394-47453413 | Msa0551480:intron | 60.0% | |
| ACGCGGTCAGTTGGACATGG+CGG | + | chr4_1:47455472-47455491 | None:intergenic | 60.0% | |
| GCTCATGCAGCAGCAGCCAG+TGG | - | chr4_1:47444926-47444945 | Msa0551480:intron | 65.0% | |
| GCAGCAGCCAGTGGCCTTCT+TGG | - | chr4_1:47444935-47444954 | Msa0551480:intron | 65.0% | |
| GCTCATGCAGCAGCAGCCAG+TGG | - | chr4_1:47444926-47444945 | Msa0551480:intron | 65.0% | |
| GCAGCAGCCAGTGGCCTTCT+TGG | - | chr4_1:47444935-47444954 | Msa0551480:intron | 65.0% | |
| TGAGACCCTGCAGACGCCCT+CGG | + | chr4_1:47453385-47453404 | None:intergenic | 65.0% | |
| !! | TGCAAGCCGAGGGCGTCTGC+AGG | - | chr4_1:47453376-47453395 | Msa0551480:intron | 70.0% |
| !! | GCAAGCCGAGGGCGTCTGCA+GGG | - | chr4_1:47453377-47453396 | Msa0551480:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 47443208 | 47455899 | 47443208 | ID=Msa0551480;Name=Msa0551480 |
| chr4_1 | mRNA | 47443208 | 47455899 | 47443208 | ID=Msa0551480-mRNA-1;Parent=Msa0551480;Name=Msa0551480-mRNA-1;_AED=0.34;_eAED=0.36;_QI=688|0.6|0.75|0.93|0.6|0.62|16|545|293 |
| chr4_1 | exon | 47443208 | 47443854 | 47443208 | ID=Msa0551480-mRNA-1:exon:12900;Parent=Msa0551480-mRNA-1 |
| chr4_1 | exon | 47443941 | 47444006 | 47443941 | ID=Msa0551480-mRNA-1:exon:12899;Parent=Msa0551480-mRNA-1 |
| chr4_1 | exon | 47445395 | 47445492 | 47445395 | ID=Msa0551480-mRNA-1:exon:12898;Parent=Msa0551480-mRNA-1 |
| chr4_1 | exon | 47445661 | 47445889 | 47445661 | ID=Msa0551480-mRNA-1:exon:12897;Parent=Msa0551480-mRNA-1 |
| chr4_1 | exon | 47446300 | 47446355 | 47446300 | ID=Msa0551480-mRNA-1:exon:12896;Parent=Msa0551480-mRNA-1 |
| chr4_1 | exon | 47446702 | 47446744 | 47446702 | ID=Msa0551480-mRNA-1:exon:12895;Parent=Msa0551480-mRNA-1 |
| chr4_1 | exon | 47447838 | 47447989 | 47447838 | ID=Msa0551480-mRNA-1:exon:12894;Parent=Msa0551480-mRNA-1 |
| chr4_1 | exon | 47448354 | 47448480 | 47448354 | ID=Msa0551480-mRNA-1:exon:12893;Parent=Msa0551480-mRNA-1 |
| chr4_1 | exon | 47449467 | 47449571 | 47449467 | ID=Msa0551480-mRNA-1:exon:12892;Parent=Msa0551480-mRNA-1 |
| chr4_1 | exon | 47453774 | 47453895 | 47453774 | ID=Msa0551480-mRNA-1:exon:12891;Parent=Msa0551480-mRNA-1 |
| chr4_1 | exon | 47454003 | 47454265 | 47454003 | ID=Msa0551480-mRNA-1:exon:12890;Parent=Msa0551480-mRNA-1 |
| chr4_1 | exon | 47455046 | 47455088 | 47455046 | ID=Msa0551480-mRNA-1:exon:12889;Parent=Msa0551480-mRNA-1 |
| chr4_1 | exon | 47455217 | 47455248 | 47455217 | ID=Msa0551480-mRNA-1:exon:12888;Parent=Msa0551480-mRNA-1 |
| chr4_1 | exon | 47455376 | 47455419 | 47455376 | ID=Msa0551480-mRNA-1:exon:12887;Parent=Msa0551480-mRNA-1 |
| chr4_1 | exon | 47455541 | 47455583 | 47455541 | ID=Msa0551480-mRNA-1:exon:12886;Parent=Msa0551480-mRNA-1 |
| chr4_1 | exon | 47455855 | 47455899 | 47455855 | ID=Msa0551480-mRNA-1:exon:12885;Parent=Msa0551480-mRNA-1 |
| chr4_1 | five_prime_UTR | 47455855 | 47455899 | 47455855 | ID=Msa0551480-mRNA-1:five_prime_utr;Parent=Msa0551480-mRNA-1 |
| chr4_1 | five_prime_UTR | 47455541 | 47455583 | 47455541 | ID=Msa0551480-mRNA-1:five_prime_utr;Parent=Msa0551480-mRNA-1 |
| chr4_1 | five_prime_UTR | 47455376 | 47455419 | 47455376 | ID=Msa0551480-mRNA-1:five_prime_utr;Parent=Msa0551480-mRNA-1 |
| chr4_1 | five_prime_UTR | 47455217 | 47455248 | 47455217 | ID=Msa0551480-mRNA-1:five_prime_utr;Parent=Msa0551480-mRNA-1 |
| chr4_1 | five_prime_UTR | 47455046 | 47455088 | 47455046 | ID=Msa0551480-mRNA-1:five_prime_utr;Parent=Msa0551480-mRNA-1 |
| chr4_1 | five_prime_UTR | 47454003 | 47454265 | 47454003 | ID=Msa0551480-mRNA-1:five_prime_utr;Parent=Msa0551480-mRNA-1 |
| chr4_1 | five_prime_UTR | 47453774 | 47453895 | 47453774 | ID=Msa0551480-mRNA-1:five_prime_utr;Parent=Msa0551480-mRNA-1 |
| chr4_1 | five_prime_UTR | 47449476 | 47449571 | 47449476 | ID=Msa0551480-mRNA-1:five_prime_utr;Parent=Msa0551480-mRNA-1 |
| chr4_1 | CDS | 47449467 | 47449475 | 47449467 | ID=Msa0551480-mRNA-1:cds;Parent=Msa0551480-mRNA-1 |
| chr4_1 | CDS | 47448354 | 47448480 | 47448354 | ID=Msa0551480-mRNA-1:cds;Parent=Msa0551480-mRNA-1 |
| chr4_1 | CDS | 47447838 | 47447989 | 47447838 | ID=Msa0551480-mRNA-1:cds;Parent=Msa0551480-mRNA-1 |
| chr4_1 | CDS | 47446702 | 47446744 | 47446702 | ID=Msa0551480-mRNA-1:cds;Parent=Msa0551480-mRNA-1 |
| chr4_1 | CDS | 47446300 | 47446355 | 47446300 | ID=Msa0551480-mRNA-1:cds;Parent=Msa0551480-mRNA-1 |
| chr4_1 | CDS | 47445661 | 47445889 | 47445661 | ID=Msa0551480-mRNA-1:cds;Parent=Msa0551480-mRNA-1 |
| chr4_1 | CDS | 47445395 | 47445492 | 47445395 | ID=Msa0551480-mRNA-1:cds;Parent=Msa0551480-mRNA-1 |
| chr4_1 | CDS | 47443941 | 47444006 | 47443941 | ID=Msa0551480-mRNA-1:cds;Parent=Msa0551480-mRNA-1 |
| chr4_1 | CDS | 47443753 | 47443854 | 47443753 | ID=Msa0551480-mRNA-1:cds;Parent=Msa0551480-mRNA-1 |
| chr4_1 | three_prime_UTR | 47443208 | 47443752 | 47443208 | ID=Msa0551480-mRNA-1:three_prime_utr;Parent=Msa0551480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
