AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0551370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0551370 MtrunA17_Chr4g0037021 68.132 91 20 2 153 239 112 197 2.37e-31 114
Msa0551370 MtrunA17_Chr6g0486041 61.429 70 20 3 175 237 129 198 1.61e-17 78.2
Msa0551370 MtrunA17_Chr3g0117931 48.193 83 34 2 153 231 114 191 1.52e-15 72.8
Msa0551370 MtrunA17_Chr8g0371501 59.341 91 28 2 153 239 112 197 4.57e-15 71.2
Msa0551370 MtrunA17_Chr5g0405791 60.440 91 27 3 153 239 112 197 1.17e-14 70.1
Msa0551370 MtrunA17_Chr2g0325101 51.389 72 26 2 153 220 112 178 1.19e-12 64.7
Msa0551370 MtrunA17_Chr4g0046221 75.000 36 9 0 185 220 11 46 1.29e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0551370 AT4G28950.1 53.261 92 32 3 153 238 112 198 4.16e-20 85.5
Msa0551370 AT4G35020.1 56.000 75 24 2 153 223 112 181 2.10e-17 78.2
Msa0551370 AT4G35020.2 56.000 75 24 2 153 223 112 181 2.10e-17 78.2
Msa0551370 AT4G35020.3 56.000 75 24 2 153 223 112 181 2.10e-17 78.2
Msa0551370 AT1G75840.1 55.556 72 23 2 153 220 112 178 8.18e-16 73.6
Msa0551370 AT3G51300.1 61.538 91 26 2 153 239 112 197 1.18e-15 73.2
Msa0551370 AT2G17800.2 60.440 91 27 2 153 239 112 197 1.83e-15 72.8
Msa0551370 AT2G17800.1 60.440 91 27 2 153 239 112 197 1.83e-15 72.8
Msa0551370 AT3G51290.2 61.538 91 26 2 153 239 713 798 3.42e-15 75.1
Msa0551370 AT1G20090.1 55.556 72 23 2 153 220 111 177 6.94e-15 71.2
Msa0551370 AT4G35950.1 59.341 91 28 2 153 239 112 197 9.58e-15 70.9
Msa0551370 AT2G44690.1 59.649 57 23 0 183 239 153 209 4.30e-14 69.3
Msa0551370 AT5G62880.1 84.211 38 6 0 185 222 145 182 2.62e-13 67.4
Msa0551370 AT5G45970.1 52.055 73 26 2 153 221 112 179 6.99e-13 65.9
Msa0551370 AT3G48040.1 77.500 40 9 0 185 224 145 184 7.56e-13 65.9

Find 145 sgRNAs with CRISPR-Local

Find 729 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTATTTGCAGTAATGTTTA+AGG 0.184795 4_1:-47339385 Msa0551370:intron
CACCTGAAGCTTTGTGTTAT+TGG 0.187053 4_1:-47337850 Msa0551370:CDS
GCAGCAGCCAGTGGCCTTCT+TGG 0.225465 4_1:-47342964 Msa0551370:five_prime_UTR
GGCTGCTGCTGCATGAGCTT+GGG 0.225768 4_1:+47342978 None:intergenic
TGGCTGCTGCTGCATGAGCT+TGG 0.233454 4_1:+47342977 None:intergenic
AATAAACACTTGAAAGAAAT+TGG 0.242653 4_1:+47334977 None:intergenic
GTCCACAAATACAAGGTTTC+TGG 0.243519 4_1:-47342596 Msa0551370:five_prime_UTR
GATGATGAAGAGAGGTATAT+TGG 0.265764 4_1:+47338317 None:intergenic
TCACATTGTAATCTAATCTT+AGG 0.297634 4_1:-47335109 Msa0551370:three_prime_UTR
ACCTGAAGCTTTGTGTTATT+GGG 0.304249 4_1:-47337849 Msa0551370:CDS
GCAGGGATATTGTTTGTATC+AGG 0.319656 4_1:-47345018 Msa0551370:intron
GTCCTTCGTATTGTAGTTCA+TGG 0.324012 4_1:-47335407 Msa0551370:three_prime_UTR
GCAGAGATGTTGTTTGTATC+AGG 0.328863 4_1:-47344688 Msa0551370:intron
GCAGGGATGTTGTTTGTATC+AGG 0.335179 4_1:-47345655 Msa0551370:intron
CCAACCTGAGAGCCACAAAT+TGG 0.336491 4_1:+47336214 None:intergenic
TTAACAACCTGAATATAGTT+TGG 0.340163 4_1:-47335021 Msa0551370:three_prime_UTR
ATATAGTTTGGTTTGTTCAT+TGG 0.348235 4_1:-47335009 Msa0551370:three_prime_UTR
AGTCATAATTTCAACATGTT+TGG 0.352448 4_1:-47335219 Msa0551370:three_prime_UTR
GCTTGCAACTTATGCGGCTT+TGG 0.360502 4_1:-47335082 Msa0551370:three_prime_UTR
AACCTGATCTCCACGTGAAC+TGG 0.374453 4_1:+47338270 None:intergenic
GAACTGCATTCAATGTAAAC+TGG 0.374474 4_1:+47335637 None:intergenic
AGCTCCAATTTGTGGCTCTC+AGG 0.380013 4_1:-47336218 Msa0551370:CDS
TGGATCGAGGGACACGATGC+TGG 0.383038 4_1:-47345201 Msa0551370:five_prime_UTR
TGTTTGGAGACTTCCAGATA+TGG 0.383401 4_1:-47335992 Msa0551370:CDS
AGGATCGCACTGCTTGTGTT+TGG 0.391046 4_1:-47336008 Msa0551370:CDS
TCCCAATAACACAAAGCTTC+AGG 0.395808 4_1:+47337848 None:intergenic
GGATCGAGGGGACACATTGC+AGG 0.398473 4_1:-47345036 Msa0551370:five_prime_UTR
ATATGAAGCTTTAAGAGCTC+TGG 0.403060 4_1:-47342678 Msa0551370:five_prime_UTR
AAGGACTGAAGATCACAAAA+TGG 0.407443 4_1:+47335424 None:intergenic
CCATCTGGTTGTTCAAAAGA+AGG 0.410044 4_1:+47345976 None:intergenic
AAAAGAACAAAATCAGATAT+AGG 0.413473 4_1:+47335863 None:intergenic
GTACAACTATTGTGTTTCTC+TGG 0.415292 4_1:-47335193 Msa0551370:three_prime_UTR
TGCTTGGCTGACATCATCAT+GGG 0.416444 4_1:+47337767 None:intergenic
TAACTAAGCCAACTGAACTT+TGG 0.417976 4_1:+47334927 None:intergenic
CATCAGATATAGCCCATATC+TGG 0.418485 4_1:+47335979 None:intergenic
GTGCGAAATTGCAGACAGAT+TGG 0.419355 4_1:+47346007 None:intergenic
TTCCAGTTCACGTGGAGATC+AGG 0.419396 4_1:-47338272 Msa0551370:intron
ACATGACAGTAGCCATTTCC+TGG 0.419708 4_1:-47335378 Msa0551370:three_prime_UTR
TGTCTTTGAAACCCACGTTT+AGG 0.423688 4_1:-47346038 Msa0551370:five_prime_UTR
TGGATCGTGGGACACGATGC+AGG 0.424618 4_1:-47345515 Msa0551370:five_prime_UTR
GTTTGATGGCACTTCTTGAT+CGG 0.430931 4_1:-47342885 Msa0551370:five_prime_UTR
TGCAAGCCGAGGGCGTTTGA+TGG 0.431145 4_1:-47342899 Msa0551370:five_prime_UTR
AATCATTTGCAGTAGTCATA+AGG 0.432289 4_1:+47334890 None:intergenic
TTTGATGGCACTTCTTGATC+GGG 0.435423 4_1:-47342884 Msa0551370:five_prime_UTR
ATGATGAAGAGAGGTATATT+GGG 0.435793 4_1:+47338318 None:intergenic
GAACAAACCAAACTATATTC+AGG 0.437094 4_1:+47335014 None:intergenic
ATCTCTTCCTCGGACATAGA+AGG 0.438219 4_1:+47342632 None:intergenic
AACAAAGAGAAAGGGGCAAA+AGG 0.438650 4_1:-47335453 Msa0551370:CDS
CAAAAGAAAACAAAGAGAAA+GGG 0.440459 4_1:-47335461 Msa0551370:CDS
GCAGGGGTGTTGTATGAATC+AGG 0.443379 4_1:-47345497 Msa0551370:intron
GCAAAAGAAAACAAAGAGAA+AGG 0.444377 4_1:-47335462 Msa0551370:CDS
TTTATAATCCAAAGTTCAGT+TGG 0.447690 4_1:-47334935 Msa0551370:three_prime_UTR
GTCATCTCCATTTGTGGACA+TGG 0.452703 4_1:-47335139 Msa0551370:three_prime_UTR
TGCGAAATTGCAGACAGATT+GGG 0.452742 4_1:+47346008 None:intergenic
AGGTACCCTTGTACCTTGCT+TGG 0.453384 4_1:+47337751 None:intergenic
CAAATGGTCATCTCCATTTG+TGG 0.458996 4_1:-47335145 Msa0551370:three_prime_UTR
TAGATCTCGGGACACGATGC+AGG 0.459494 4_1:-47344866 Msa0551370:five_prime_UTR
GCTGGGGTGCTGTATGTATC+AGG 0.461632 4_1:-47345183 Msa0551370:intron
AGCTTTAAGAGCTCTGGATT+CGG 0.464209 4_1:-47342672 Msa0551370:five_prime_UTR
AACATCAAGCTATTTGTCTC+TGG 0.464278 4_1:-47335260 Msa0551370:three_prime_UTR
GACCAGAAACCTTGTATTTG+TGG 0.466017 4_1:+47342594 None:intergenic
TGGATCGAGGGACACGATGC+AGG 0.467043 4_1:-47345673 Msa0551370:five_prime_UTR
GTTTGGAGACTTCCAGATAT+GGG 0.469760 4_1:-47335991 Msa0551370:CDS
GGATCGAGGGACACGATGCT+GGG 0.471669 4_1:-47345200 Msa0551370:five_prime_UTR
TTGCTTGGCTGACATCATCA+TGG 0.474830 4_1:+47337766 None:intergenic
TGTGGAGTATAGATGTCTTT+CGG 0.476872 4_1:-47336251 Msa0551370:CDS
GATCGGGAGTTTGATGATCT+AGG 0.485183 4_1:-47342868 Msa0551370:five_prime_UTR
TGAAGATCACAAAATGGAAC+AGG 0.487806 4_1:+47335430 None:intergenic
TTGCAGCTCTGGCTAGTGCT+TGG 0.489119 4_1:-47343063 Msa0551370:intron
TCGTGTTTGAAGACACTTGA+AGG 0.493320 4_1:-47335947 Msa0551370:CDS
CCAATTTGTGGCTCTCAGGT+TGG 0.495101 4_1:-47336214 Msa0551370:intron
GTATATGTAATTAATTATGT+TGG 0.498625 4_1:-47335048 Msa0551370:three_prime_UTR
GTAAAACCCATGTCCACAAA+TGG 0.499593 4_1:+47335132 None:intergenic
GAGGAACTGAGAAAACTTAT+CGG 0.501231 4_1:-47335664 Msa0551370:CDS
AGCATTCACAAAAGCATGGT+TGG 0.506208 4_1:+47338348 None:intergenic
TCTTGATGGCTACAATGCTA+AGG 0.511885 4_1:-47343035 Msa0551370:five_prime_UTR
TGGCTGTAGAACTACCTTGA+TGG 0.522363 4_1:+47335490 None:intergenic
GAAACCTTGTATTTGTGGAC+AGG 0.524408 4_1:+47342599 None:intergenic
TGCCTCTTCAAATTCTTGAA+CGG 0.528612 4_1:-47337874 Msa0551370:CDS
GCTCATGCAGCAGCAGCCAG+TGG 0.529345 4_1:-47342973 Msa0551370:five_prime_UTR
CAAGCTTTAACGCGGTCAGT+TGG 0.532328 4_1:+47335290 None:intergenic
TGTGTGGCCAAGAAGGCCAC+TGG 0.533669 4_1:+47342957 None:intergenic
TTTGAAACCCACGTTTAGGT+TGG 0.534245 4_1:-47346034 Msa0551370:five_prime_UTR
TCATCTCCATTTGTGGACAT+GGG 0.536199 4_1:-47335138 Msa0551370:three_prime_UTR
GTGTCTTCAAACACGACTCA+CGG 0.536372 4_1:+47335954 None:intergenic
GGATCGTGGGACACGATGCA+GGG 0.539319 4_1:-47345514 Msa0551370:five_prime_UTR
ATGCAGTTCCAAAACACAAA+AGG 0.539727 4_1:-47335623 Msa0551370:intron
ACATGGCGGTTCCTCCATCT+AGG 0.541209 4_1:+47335313 None:intergenic
ACCCGTGCGTTTCTTGTGGT+AGG 0.550978 4_1:-47335892 Msa0551370:CDS
CAGATATGGGCTATATCTGA+TGG 0.553081 4_1:-47335978 Msa0551370:CDS
CATTTGATAATCAATACAAA+AGG 0.558185 4_1:+47335162 None:intergenic
AGCTATTTGTCTCTGGCTGA+AGG 0.559006 4_1:-47335253 Msa0551370:three_prime_UTR
TTCTTGGCCACACAGAACTA+CGG 0.560332 4_1:-47342948 Msa0551370:five_prime_UTR
TATAAGATATATAATCAGAA+TGG 0.561705 4_1:+47335346 None:intergenic
TTGTCGTGCATAATCGCAGA+TGG 0.566080 4_1:+47339425 None:intergenic
GATCGAGGGGACACATTGCA+GGG 0.567110 4_1:-47345035 Msa0551370:five_prime_UTR
TTAACGCGGTCAGTTGGACA+TGG 0.567380 4_1:+47335296 None:intergenic
CGATAGCACTTGCAAGCCGA+GGG 0.567822 4_1:-47342909 Msa0551370:five_prime_UTR
TCGATAGCACTTGCAAGCCG+AGG 0.569823 4_1:-47342910 Msa0551370:five_prime_UTR
CGTGCGTTTCTTGTGGTAGG+AGG 0.570185 4_1:-47335889 Msa0551370:CDS
GTGCATAATCGCAGATGGAA+AGG 0.570624 4_1:+47339430 None:intergenic
TACATGCAGTACAGCCACTT+AGG 0.572185 4_1:+47346105 None:intergenic
GATGTGGCAGCTCCAATTTG+TGG 0.572587 4_1:-47336226 Msa0551370:CDS
ATGAGCATCTATCTCTTCCT+CGG 0.573503 4_1:+47342622 None:intergenic
CGGCTTGCAAGTGCTATCGA+TGG 0.576690 4_1:+47342913 None:intergenic
TGTTACCCGTGCGTTTCTTG+TGG 0.577484 4_1:-47335896 Msa0551370:CDS
ACTTGCGAGTCTGAATTCAC+AGG 0.580218 4_1:-47337792 Msa0551370:CDS
AAAAGAAAACAAAGAGAAAG+GGG 0.580909 4_1:-47335460 Msa0551370:CDS
TGTCTTCAAACACGACTCAC+GGG 0.581712 4_1:+47335955 None:intergenic
CGCAACACAATATAACTAAG+TGG 0.583689 4_1:-47346078 Msa0551370:five_prime_UTR
AGATCTCGGGACACGATGCA+GGG 0.584894 4_1:-47344865 Msa0551370:five_prime_UTR
TACTGCACCTTCTATGTCCG+AGG 0.589699 4_1:-47342639 Msa0551370:five_prime_UTR
CGTGTTTGAAGACACTTGAA+GGG 0.593182 4_1:-47335946 Msa0551370:CDS
GGAAGTGCTTGCAACTTATG+CGG 0.594099 4_1:-47335088 Msa0551370:three_prime_UTR
GACAAAATACTTTATTAGAG+AGG 0.597106 4_1:-47339407 Msa0551370:five_prime_UTR
CTTGCAAGTGCTATCGATGG+AGG 0.598024 4_1:+47342916 None:intergenic
GGATCGAGGGACACGATGCA+GGG 0.601952 4_1:-47345672 Msa0551370:five_prime_UTR
CCCAAGCATTCACAAAAGCA+TGG 0.613213 4_1:+47338344 None:intergenic
TCATCCTGTCCACAAATACA+AGG 0.613994 4_1:-47342603 Msa0551370:five_prime_UTR
CTTGCGAGTCTGAATTCACA+GGG 0.614185 4_1:-47337791 Msa0551370:CDS
GCTTGGCTGACATCATCATG+GGG 0.617695 4_1:+47337768 None:intergenic
GAAGTGCCATCAAACGCCCT+CGG 0.619013 4_1:+47342893 None:intergenic
GATCGAGGGACACGATGCTG+GGG 0.619534 4_1:-47345199 Msa0551370:five_prime_UTR
GACCGTTCAAGAATTTGAAG+AGG 0.619547 4_1:+47337872 None:intergenic
TCCTACCACAAGAAACGCAC+GGG 0.620429 4_1:+47335891 None:intergenic
GATCGTGGGACACGATGCAG+GGG 0.622017 4_1:-47345513 Msa0551370:five_prime_UTR
GTAGTTCTGTGTGGCCAAGA+AGG 0.622680 4_1:+47342950 None:intergenic
AAACAGAATGAACAGCATTG+AGG 0.623559 4_1:+47335813 None:intergenic
CAGATGGAAAGGAAAGCTCA+AGG 0.626656 4_1:+47339441 None:intergenic
TTGGGTTTCCAACCTAAACG+TGG 0.634460 4_1:+47346026 None:intergenic
TGGGTTTCCAACCTAAACGT+GGG 0.640889 4_1:+47346027 None:intergenic
ATGATGATGTCAGCCAAGCA+AGG 0.643183 4_1:-47337764 Msa0551370:intron
CTCCTACCACAAGAAACGCA+CGG 0.646206 4_1:+47335890 None:intergenic
TAGATGTCTTTCGGACGATG+TGG 0.649543 4_1:-47336242 Msa0551370:CDS
GTGAATTCAGACTCGCAAGT+GGG 0.653816 4_1:+47337795 None:intergenic
AGAAGCTTGATGATGAAGAG+AGG 0.654273 4_1:+47338309 None:intergenic
CTCCATGAACTACAATACGA+AGG 0.654568 4_1:+47335405 None:intergenic
TGTGAATTCAGACTCGCAAG+TGG 0.664881 4_1:+47337794 None:intergenic
GATCTCGGGACACGATGCAG+GGG 0.665011 4_1:-47344864 Msa0551370:five_prime_UTR
TCTGTTCAGAAAAGTAAACA+AGG 0.669586 4_1:+47339468 None:intergenic
CTTCGTATTGTAGTTCATGG+AGG 0.671942 4_1:-47335404 Msa0551370:three_prime_UTR
CCTTTGGATACAGAATGTGA+AGG 0.689990 4_1:-47335528 Msa0551370:intron
ACGCGGTCAGTTGGACATGG+CGG 0.694583 4_1:+47335299 None:intergenic
TTTATAAGCAAGCTTTAACG+CGG 0.695111 4_1:+47335282 None:intergenic
TATGCAACCGTAGTTCTGTG+TGG 0.732630 4_1:+47342941 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTTATATTATAAAATA+TGG + chr4_1:47338792-47338811 None:intergenic 0.0%
!! TATATTTATATTATAAAATA+TGG + chr4_1:47339626-47339645 None:intergenic 0.0%
!!! TAAATAATTTAATTTTGTAC+CGG + chr4_1:47335295-47335314 None:intergenic 10.0%
!! AGAAAATTATAACATTTATT+CGG - chr4_1:47335620-47335639 Msa0551370:intron 10.0%
!!! ATATAAAATTGATTCTAAAA+TGG - chr4_1:47336513-47336532 Msa0551370:intron 10.0%
!! AATATTCAAAAATAAATGAA+AGG + chr4_1:47337126-47337145 None:intergenic 10.0%
!! GAAAAATATATTATTATCTA+AGG + chr4_1:47337183-47337202 None:intergenic 10.0%
!!! TTATCTCTATTTTTTTTTTT+TGG - chr4_1:47337213-47337232 Msa0551370:intron 10.0%
!! TTTGGTATTATATATTTATA+TGG - chr4_1:47337231-47337250 Msa0551370:intron 10.0%
!! AGAAAAAAAAAAACTAAATA+AGG + chr4_1:47338293-47338312 None:intergenic 10.0%
!!! ATTAAATATTTTTTATTCTC+TGG - chr4_1:47339110-47339129 Msa0551370:intron 10.0%
!!! ATTAAATATATTTTATTCTC+TGG - chr4_1:47339944-47339963 Msa0551370:intron 10.0%
!!! TTATTTTGAATGTTTATTTA+AGG + chr4_1:47340190-47340209 None:intergenic 10.0%
!!! ATTAAATATTTTTTATTCTC+TGG - chr4_1:47339110-47339129 Msa0551370:intron 10.0%
!!! CACTTTTTAAATTTATTTTT+AGG + chr4_1:47340856-47340875 None:intergenic 10.0%
!!! TAATTTTGAATGTTTATTTA+AGG + chr4_1:47341028-47341047 None:intergenic 10.0%
!! ATTCATAATATGAAATAAAA+GGG + chr4_1:47341689-47341708 None:intergenic 10.0%
!! TATTCATAATATGAAATAAA+AGG + chr4_1:47341690-47341709 None:intergenic 10.0%
!! TGTTTGTTTAATATATAATT+TGG + chr4_1:47344003-47344022 None:intergenic 10.0%
!! TCTTTATATAATTTAAAAAC+CGG - chr4_1:47344249-47344268 Msa0551370:intron 10.0%
!!! TAAATGTTATAATTTTCTAC+AGG + chr4_1:47335618-47335637 None:intergenic 15.0%
!!! TAAATGTTATATTTTTCTAC+AGG + chr4_1:47335767-47335786 None:intergenic 15.0%
!!! ATGAAAAAGCAAATTTTTTT+TGG + chr4_1:47336064-47336083 None:intergenic 15.0%
!! ATGAAGAAGAAAAAAAAAAT+TGG + chr4_1:47336224-47336243 None:intergenic 15.0%
!!! ATGAAAAAGCAAATTTTTTT+TGG + chr4_1:47336064-47336083 None:intergenic 15.0%
!! AAATTGAAAATTCATATTTG+AGG - chr4_1:47338583-47338602 Msa0551370:intron 15.0%
!! AATTGAAAATTCATATTTGA+GGG - chr4_1:47338584-47338603 Msa0551370:intron 15.0%
!! AACATATGACTAAAAAAAAA+TGG + chr4_1:47338731-47338750 None:intergenic 15.0%
!!! TTATTTTGAATGTTTATTTG+AGG + chr4_1:47339356-47339375 None:intergenic 15.0%
!! AACATATGACTAAAAAAAAA+AGG + chr4_1:47338731-47338750 None:intergenic 15.0%
!!! CACTTTTTAAATTTATTTTC+AGG + chr4_1:47339184-47339203 None:intergenic 15.0%
!! AAACATATGACTAAAAAAAA+TGG + chr4_1:47338732-47338751 None:intergenic 15.0%
!!! GTTTCAATTTTAAACTTTTA+TGG - chr4_1:47340415-47340434 Msa0551370:intron 15.0%
!! AAATACCTTTAATGAAATTT+CGG - chr4_1:47338914-47338933 Msa0551370:intron 15.0%
!!! TTTTTGACAAGTTATTTTTA+TGG - chr4_1:47340907-47340926 Msa0551370:intron 15.0%
!!! TTTTGACAAGTTATTTTTAT+GGG - chr4_1:47340908-47340927 Msa0551370:intron 15.0%
!! ATATATGATGAACTTAATTT+CGG - chr4_1:47337676-47337695 Msa0551370:intron 15.0%
!!! AAAAATTAATTGTTGTTTGT+TGG + chr4_1:47343493-47343512 None:intergenic 15.0%
!! AATATTATTATCAACGTATA+AGG + chr4_1:47344278-47344297 None:intergenic 15.0%
!! ATTAGCTAATCTTATTAAAA+AGG - chr4_1:47344821-47344840 Msa0551370:intron 15.0%
!! TAACATGAAAAAATAATTGA+TGG + chr4_1:47344972-47344991 None:intergenic 15.0%
!! TATAAGATATATAATCAGAA+TGG + chr4_1:47345663-47345682 None:intergenic 15.0%
!! GTATATGTAATTAATTATGT+TGG - chr4_1:47345958-47345977 Msa0551370:intron 15.0%
!!! TAATCTCTTTTGTTACTTTA+TGG - chr4_1:47335203-47335222 Msa0551370:three_prime_UTR 20.0%
!! CTACAAAATTCAGAATAAAA+AGG + chr4_1:47335266-47335285 None:intergenic 20.0%
!!! CTTTGTTTTTTATTGTTTGA+TGG - chr4_1:47335385-47335404 Msa0551370:three_prime_UTR 20.0%
!! GATGAAGATGAAAAAAAAAT+TGG + chr4_1:47335894-47335913 None:intergenic 20.0%
!! AAAGAAGAATATTCAAACAT+AGG + chr4_1:47336019-47336038 None:intergenic 20.0%
!! AAAAACAAAGATTGAAACAT+AGG + chr4_1:47335375-47335394 None:intergenic 20.0%
!!! TTCTTTGGATTTTTTAAAGA+AGG - chr4_1:47337021-47337040 Msa0551370:intron 20.0%
!! TTCAGAAAAGAGAAAAAAAA+AGG + chr4_1:47337492-47337511 None:intergenic 20.0%
!! TTATTTGACTATTCTTTACA+TGG + chr4_1:47337714-47337733 None:intergenic 20.0%
!! AAAAGAACAAAATCAGATAT+AGG + chr4_1:47337875-47337894 None:intergenic 20.0%
!!! GTTTCGATTTTAAACTTTTA+TGG - chr4_1:47338748-47338767 Msa0551370:intron 20.0%
!!! TTTTTGACAAGTTATTTGAA+TGG - chr4_1:47339235-47339254 Msa0551370:intron 20.0%
!!! GTTTCGATTTTAAACTTTTA+TGG - chr4_1:47338748-47338767 Msa0551370:intron 20.0%
!!! TTTTTGACAAGTTATTTGTA+TGG - chr4_1:47340069-47340088 Msa0551370:intron 20.0%
!!! TTGAATGTTTATTTAAGGTA+TGG + chr4_1:47340185-47340204 None:intergenic 20.0%
!!! TTTGACAAGTTATTTTTATG+GGG - chr4_1:47340909-47340928 Msa0551370:intron 20.0%
!!! TTGAATGTTTATTTAAGGTA+TGG + chr4_1:47340185-47340204 None:intergenic 20.0%
!! TTATTTGACTATTCTTTACA+TGG + chr4_1:47337714-47337733 None:intergenic 20.0%
!!! GAAATTTTGAGTAATGTTTA+AGG - chr4_1:47341716-47341735 Msa0551370:intron 20.0%
!!! GTATTTCTTTTTGAATAGTA+TGG - chr4_1:47341746-47341765 Msa0551370:intron 20.0%
!! TCGAGTATTAAATATATTAG+TGG - chr4_1:47341771-47341790 Msa0551370:intron 20.0%
!! ATTATAAAACTAGTTACAGT+AGG + chr4_1:47342362-47342381 None:intergenic 20.0%
!! ATCTACAATTTAAATAAGAG+AGG - chr4_1:47342567-47342586 Msa0551370:intron 20.0%
!! TCTACAATTTAAATAAGAGA+GGG - chr4_1:47342568-47342587 Msa0551370:intron 20.0%
!! ATGCAATACATGAAAAAAAT+AGG + chr4_1:47342809-47342828 None:intergenic 20.0%
!! TATATAATGAGTACAAAAAG+TGG + chr4_1:47343375-47343394 None:intergenic 20.0%
!! TATAAAGATAACTGTTGATA+TGG - chr4_1:47343391-47343410 Msa0551370:intron 20.0%
!! CTTCCTGTTTATATATATAA+AGG - chr4_1:47343454-47343473 Msa0551370:intron 20.0%
!! ATGCCTTTATATATATAAAC+AGG + chr4_1:47343460-47343479 None:intergenic 20.0%
!! AAGTAAAAGAAACAGTTAAA+GGG - chr4_1:47344032-47344051 Msa0551370:intron 20.0%
!! CAACAAGAATTTATTTATCT+TGG - chr4_1:47344519-47344538 Msa0551370:intron 20.0%
!! AAACTAAATCTTCAAACAAT+AGG + chr4_1:47344938-47344957 None:intergenic 20.0%
!! AAAAGAACAAAATCAGATAT+AGG + chr4_1:47337875-47337894 None:intergenic 20.0%
!!! TGATTTACTATATTTTCTGA+AGG - chr4_1:47345317-47345336 Msa0551370:intron 20.0%
!!! GATTTACTATATTTTCTGAA+GGG - chr4_1:47345318-47345337 Msa0551370:intron 20.0%
!!! TATATATACCTTTTGTGTTT+TGG + chr4_1:47345394-47345413 None:intergenic 20.0%
!!! CATTTGATAATCAATACAAA+AGG + chr4_1:47345847-47345866 None:intergenic 20.0%
!!! CTTTTGTATTGATTATCAAA+TGG - chr4_1:47345845-47345864 Msa0551370:intron 20.0%
!! AATAAACACTTGAAAGAAAT+TGG + chr4_1:47346032-47346051 None:intergenic 20.0%
! AAATAAAGAAGATTACCATC+TGG + chr4_1:47335048-47335067 None:intergenic 25.0%
! TGTTTATGTTTATGTCACAA+AGG + chr4_1:47335076-47335095 None:intergenic 25.0%
!!! GGTGAAAAAGCAAATTTTTT+TGG + chr4_1:47335581-47335600 None:intergenic 25.0%
! TATAACATTTATTCGGATTG+AGG - chr4_1:47335627-47335646 Msa0551370:CDS 25.0%
! ATAACATTTATTCGGATTGA+GGG - chr4_1:47335628-47335647 Msa0551370:CDS 25.0%
!! TATTCCTAATTTTGTAGTTC+TGG - chr4_1:47335785-47335804 Msa0551370:intron 25.0%
! AATAAAGAAAGATTGAAACC+TGG + chr4_1:47335854-47335873 None:intergenic 25.0%
!! AGATCTAGAACTACAAAATT+AGG + chr4_1:47336127-47336146 None:intergenic 25.0%
!!! AATTTTGTAGTTCTAGATCT+CGG - chr4_1:47336127-47336146 Msa0551370:intron 25.0%
!! CAAATTTTATAATTGTGGAC+AGG + chr4_1:47336430-47336449 None:intergenic 25.0%
!! GTTGGCAAATTTTATAATTG+TGG + chr4_1:47336435-47336454 None:intergenic 25.0%
! GCAAAAAAAATGTCAAATGT+TGG + chr4_1:47336453-47336472 None:intergenic 25.0%
!!! TTTTTTTTGCTTCTCATTGT+TGG - chr4_1:47336463-47336482 Msa0551370:intron 25.0%
! AAGAAACAGAAGAATAAAAC+CGG + chr4_1:47336768-47336787 None:intergenic 25.0%
!!! TTTTAAAGAAGGCATCTTTT+TGG - chr4_1:47337032-47337051 Msa0551370:intron 25.0%
! ATATTTATATGGTGCATGTA+TGG - chr4_1:47337242-47337261 Msa0551370:intron 25.0%
! TATTTATATGGTGCATGTAT+GGG - chr4_1:47337243-47337262 Msa0551370:intron 25.0%
! TATGATGAACTTAATTTCAG+AGG - chr4_1:47337679-47337698 Msa0551370:intron 25.0%
! AATGTCAAAATCCATGTAAA+GGG + chr4_1:47338478-47338497 None:intergenic 25.0%
!! TATGGTTGTAGATTATGTTT+TGG - chr4_1:47338766-47338785 Msa0551370:intron 25.0%
! AACTGCAGAAATTTCATTAA+AGG + chr4_1:47338922-47338941 None:intergenic 25.0%
! AAATATTTAATTGAGCGCAA+TGG + chr4_1:47339101-47339120 None:intergenic 25.0%
! CAAAAGAACTTGTAATTAAG+CGG + chr4_1:47339268-47339287 None:intergenic 25.0%
!! TTGAATGTTTATTTGAGGTA+TGG + chr4_1:47339351-47339370 None:intergenic 25.0%
! AGATCATAATACACTATTTG+AGG - chr4_1:47339394-47339413 Msa0551370:exon 25.0%
! GATCATAATACACTATTTGA+GGG - chr4_1:47339395-47339414 Msa0551370:five_prime_UTR 25.0%
! CATTTATTAATCCAAACTTG+TGG - chr4_1:47339528-47339547 Msa0551370:intron 25.0%
! ATTAAAACTTTCCACAAGTT+TGG + chr4_1:47339542-47339561 None:intergenic 25.0%
!! TATGGTTGTAGATTATGTTT+TGG - chr4_1:47338766-47338785 Msa0551370:intron 25.0%
! AACTGCAGAAATTTCATTAA+AGG + chr4_1:47338922-47338941 None:intergenic 25.0%
! CAAAAGAACTTGTAATTAAG+CGG + chr4_1:47339268-47339287 None:intergenic 25.0%
! AGATCATAATACACTATTTG+AGG - chr4_1:47339394-47339413 Msa0551370:exon 25.0%
! GATCATAATACACTATTTGA+GGG - chr4_1:47339395-47339414 Msa0551370:five_prime_UTR 25.0%
! GATAATGATATAGAATCTGT+AGG - chr4_1:47340299-47340318 Msa0551370:intron 25.0%
! CATTTATTAATCCAAACTTG+TGG - chr4_1:47339528-47339547 Msa0551370:intron 25.0%
! ATTAAAACTTTCCACAAGTT+TGG + chr4_1:47339542-47339561 None:intergenic 25.0%
! AAATATTTAATTGAGCGCAA+TGG + chr4_1:47339101-47339120 None:intergenic 25.0%
!!! TTGACAAGTTATTTTTATGG+GGG - chr4_1:47340910-47340929 Msa0551370:intron 25.0%
! CAAAAGAACTTGTAATTAAG+CGG + chr4_1:47339268-47339287 None:intergenic 25.0%
! AGATCATAATACACTATTTG+AGG - chr4_1:47339394-47339413 Msa0551370:exon 25.0%
! GATCATAATACACTATTTGA+GGG - chr4_1:47339395-47339414 Msa0551370:five_prime_UTR 25.0%
!! ACTGATAATGATATCGAAAA+TGG - chr4_1:47341134-47341153 Msa0551370:intron 25.0%
! ACAAAGAGCTTAAGAAAAAA+GGG + chr4_1:47341433-47341452 None:intergenic 25.0%
! AACAAAGAGCTTAAGAAAAA+AGG + chr4_1:47341434-47341453 None:intergenic 25.0%
! GACAAAATACTTTATTAGAG+AGG - chr4_1:47341599-47341618 Msa0551370:intron 25.0%
! GTTATTTGCAGTAATGTTTA+AGG - chr4_1:47341621-47341640 Msa0551370:intron 25.0%
! TAATTAGTATAACCTGCTAT+AGG - chr4_1:47341836-47341855 Msa0551370:intron 25.0%
! TCAAATATTAGAAGCTATAG+CGG + chr4_1:47342180-47342199 None:intergenic 25.0%
! AACCATTGTTCTGTTATAAA+AGG - chr4_1:47342298-47342317 Msa0551370:intron 25.0%
!!! GCTACTCTGTTTTTATTTAT+GGG + chr4_1:47342445-47342464 None:intergenic 25.0%
!! TGATTTTATGATATGCTGAT+TGG + chr4_1:47342482-47342501 None:intergenic 25.0%
! ATTTAAATAAGAGAGGGAAA+TGG - chr4_1:47342574-47342593 Msa0551370:intron 25.0%
! ACATGAAAAAAATAGGTTTC+AGG + chr4_1:47342802-47342821 None:intergenic 25.0%
!! GCAGATTTTCAAATAAAGAA+AGG + chr4_1:47342956-47342975 None:intergenic 25.0%
! ATATTTCAACGAACATTACA+AGG + chr4_1:47342989-47343008 None:intergenic 25.0%
!!! TATATTTTCTCTTAGCTTTC+TGG - chr4_1:47343021-47343040 Msa0551370:five_prime_UTR 25.0%
!! AGAGATTTCAATTTTTCTCA+AGG + chr4_1:47343278-47343297 None:intergenic 25.0%
! TTACGAATCTATCATCAATT+TGG - chr4_1:47343674-47343693 Msa0551370:intron 25.0%
! ATAATTTGGCAAATTGTAGA+AGG + chr4_1:47343989-47344008 None:intergenic 25.0%
! GAAGTAAAAGAAACAGTTAA+AGG - chr4_1:47344031-47344050 Msa0551370:intron 25.0%
! CTGTAAATTTATGTTATGCT+TGG - chr4_1:47344613-47344632 Msa0551370:intron 25.0%
!! AATAATTGATGGTAACTACA+TGG + chr4_1:47344961-47344980 None:intergenic 25.0%
!!! ATTTTTTCATGTTACCAATC+AGG - chr4_1:47344978-47344997 Msa0551370:intron 25.0%
!! ATTTGAATCTTTGAAAGTTC+TGG - chr4_1:47345421-47345440 Msa0551370:intron 25.0%
! CAAAAGAAAACAAAGAGAAA+GGG - chr4_1:47345545-47345564 Msa0551370:intron 25.0%
! AAAAGAAAACAAAGAGAAAG+GGG - chr4_1:47345546-47345565 Msa0551370:intron 25.0%
! AGTCATAATTTCAACATGTT+TGG - chr4_1:47345787-47345806 Msa0551370:intron 25.0%
! TCACATTGTAATCTAATCTT+AGG - chr4_1:47345897-47345916 Msa0551370:intron 25.0%
! TTAACAACCTGAATATAGTT+TGG - chr4_1:47345985-47346004 Msa0551370:five_prime_UTR 25.0%
!!! ATATAGTTTGGTTTGTTCAT+TGG - chr4_1:47345997-47346016 Msa0551370:five_prime_UTR 25.0%
! TTTATAATCCAAAGTTCAGT+TGG - chr4_1:47346071-47346090 Msa0551370:five_prime_UTR 25.0%
! CTGAATTTTGTAGTTTTCAC+CGG - chr4_1:47335273-47335292 Msa0551370:three_prime_UTR 30.0%
! TATTTCGAATTTTGTAGCTC+TGG - chr4_1:47335313-47335332 Msa0551370:three_prime_UTR 30.0%
!!! TGAAAAGGGGGAATTTTTTT+TGG + chr4_1:47335419-47335438 None:intergenic 30.0%
AGTGAAAACTGAATGAAAAG+GGG + chr4_1:47335432-47335451 None:intergenic 30.0%
CAGTGAAAACTGAATGAAAA+GGG + chr4_1:47335433-47335452 None:intergenic 30.0%
! TATTCCGAATTTTGTAGTTC+TGG - chr4_1:47335471-47335490 Msa0551370:CDS 30.0%
!!! GGTGAAAAGGCAAATTTTTT+TGG + chr4_1:47335730-47335749 None:intergenic 30.0%
! TATTCCGAATTTTGTAGTTC+TGG - chr4_1:47335471-47335490 Msa0551370:CDS 30.0%
!!! ATTTTGTAGTTCTAGATCTC+GGG - chr4_1:47336128-47336147 Msa0551370:intron 30.0%
AGTAAAGAAAGATTGAAACG+TGG + chr4_1:47336184-47336203 None:intergenic 30.0%
! TATTCCGAATTTTGTAGTTC+TGG - chr4_1:47335471-47335490 Msa0551370:CDS 30.0%
AGATCCAGAACTACAAAATT+CGG + chr4_1:47336287-47336306 None:intergenic 30.0%
!!! AATTTTGTAGTTCTGGATCT+AGG - chr4_1:47336287-47336306 Msa0551370:intron 30.0%
!!! ATTTTGTAGTTCTGGATCTA+GGG - chr4_1:47336288-47336307 Msa0551370:intron 30.0%
AGAAACAGAAGAATAAAACC+GGG + chr4_1:47336767-47336786 None:intergenic 30.0%
AAGATGAAGAAGACAAACAA+TGG - chr4_1:47336830-47336849 Msa0551370:intron 30.0%
!!! TTATGGCTGGCTTTTTAATT+GGG - chr4_1:47336984-47337003 Msa0551370:intron 30.0%
! ATTACAATTTTGTCCTTGAG+TGG - chr4_1:47337268-47337287 Msa0551370:intron 30.0%
! TTACAATTTTGTCCTTGAGT+GGG - chr4_1:47337269-47337288 Msa0551370:intron 30.0%
! TTTTTGTGCAAAATTGCAGA+TGG + chr4_1:47337542-47337561 None:intergenic 30.0%
TTGCACAAAAAAATACCCAA+AGG - chr4_1:47337551-47337570 Msa0551370:intron 30.0%
AAATACCCAAAGGACATTTA+AGG - chr4_1:47337561-47337580 Msa0551370:intron 30.0%
AATACCCAAAGGACATTTAA+GGG - chr4_1:47337562-47337581 Msa0551370:intron 30.0%
ATTTCCCTTAAATGTCCTTT+GGG + chr4_1:47337569-47337588 None:intergenic 30.0%
AATTTCCCTTAAATGTCCTT+TGG + chr4_1:47337570-47337589 None:intergenic 30.0%
ACAAGTAGCGTTTAAATAAC+TGG - chr4_1:47337635-47337654 Msa0551370:intron 30.0%
GAATGTCAAAATCCATGTAA+AGG + chr4_1:47338479-47338498 None:intergenic 30.0%
! ATAGTGAATTTCATTTTCCG+AGG + chr4_1:47338547-47338566 None:intergenic 30.0%
ATTTGAGGGTGAAAAAGTAA+AGG - chr4_1:47338598-47338617 Msa0551370:intron 30.0%
GATAATGATATCAAATCTGC+AGG - chr4_1:47338654-47338673 Msa0551370:intron 30.0%
TTGACAAGTTATTTGAATGG+TGG - chr4_1:47339238-47339257 Msa0551370:intron 30.0%
TTATCATCACTATCATCACT+GGG + chr4_1:47339293-47339312 None:intergenic 30.0%
TTTATCATCACTATCATCAC+TGG + chr4_1:47339294-47339313 None:intergenic 30.0%
! TGATGATAGTGATGATAAAG+CGG - chr4_1:47339295-47339314 Msa0551370:intron 30.0%
ATTTGAGGGTGAAAAAGTAA+AGG - chr4_1:47338598-47338617 Msa0551370:intron 30.0%
GATAATGATATCAAATCTGC+AGG - chr4_1:47338654-47338673 Msa0551370:intron 30.0%
TAGTCATGTTTACAATGTTC+AGG + chr4_1:47339852-47339871 None:intergenic 30.0%
TGACTAATTCTATCCAGAAA+CGG - chr4_1:47339866-47339885 Msa0551370:intron 30.0%
ATATATTTAATCGAGCGCAA+TGG + chr4_1:47339935-47339954 None:intergenic 30.0%
TTGACAAGTTATTTGTATGG+TGG - chr4_1:47340072-47340091 Msa0551370:intron 30.0%
TTATCATCACTATCATCACT+GGG + chr4_1:47339293-47339312 None:intergenic 30.0%
TTTATCATCACTATCATCAC+TGG + chr4_1:47339294-47339313 None:intergenic 30.0%
! TGATGATAGTGATGATAAAG+CGG - chr4_1:47339295-47339314 Msa0551370:intron 30.0%
! ATTTAAGGTATGGCATTGAA+TGG + chr4_1:47340175-47340194 None:intergenic 30.0%
ATTTGAGGGTGAAAAAGTAA+AGG - chr4_1:47338598-47338617 Msa0551370:intron 30.0%
AACTGCCGAAATTTCATTAA+AGG + chr4_1:47340594-47340613 None:intergenic 30.0%
GGAACAAATTATAAAGCTTC+CGG + chr4_1:47338997-47339016 None:intergenic 30.0%
ACAACAAACCCAAAATTCAT+GGG - chr4_1:47340809-47340828 Msa0551370:intron 30.0%
! TTAAGACTCCCATGAATTTT+GGG + chr4_1:47340820-47340839 None:intergenic 30.0%
!! TTTAAGACTCCCATGAATTT+TGG + chr4_1:47340821-47340840 None:intergenic 30.0%
TTATCATCACTATCATCACT+GGG + chr4_1:47339293-47339312 None:intergenic 30.0%
TTTATCATCACTATCATCAC+TGG + chr4_1:47339294-47339313 None:intergenic 30.0%
! TGATGATAGTGATGATAAAG+CGG - chr4_1:47339295-47339314 Msa0551370:intron 30.0%
! ATTTAAGGTATGGCATTGAA+TGG + chr4_1:47340175-47340194 None:intergenic 30.0%
ATTTGAGGGTGAAAAAGTAA+AGG - chr4_1:47338598-47338617 Msa0551370:intron 30.0%
ATTTCCCTTAAATGTCCTTT+GGG + chr4_1:47337569-47337588 None:intergenic 30.0%
AATTTCCCTTAAATGTCCTT+TGG + chr4_1:47337570-47337589 None:intergenic 30.0%
ACAAGTAGCGTTTAAATAAC+TGG - chr4_1:47337635-47337654 Msa0551370:intron 30.0%
TATGATGAACTTAATTTCGG+AGG - chr4_1:47341281-47341300 Msa0551370:intron 30.0%
GAAAAAAGGGAAAAGAGAAA+AGG + chr4_1:47341420-47341439 None:intergenic 30.0%
AACAATGAGAAAAAAGGGAA+AGG + chr4_1:47341495-47341514 None:intergenic 30.0%
CAGAGAACAATGAGAAAAAA+GGG + chr4_1:47341500-47341519 None:intergenic 30.0%
TCAGAGAACAATGAGAAAAA+AGG + chr4_1:47341501-47341520 None:intergenic 30.0%
TCTGTTCAGAAAAGTAAACA+AGG + chr4_1:47341541-47341560 None:intergenic 30.0%
AGGGATAACAAAATCGAAAA+AGG + chr4_1:47341670-47341689 None:intergenic 30.0%
ACTAAGTTACATCTCTTAAC+TGG + chr4_1:47341817-47341836 None:intergenic 30.0%
AATCAGTTTACTACTCATCT+TGG - chr4_1:47341929-47341948 Msa0551370:intron 30.0%
! AATTTTCTGCGATATGTGAT+TGG + chr4_1:47342117-47342136 None:intergenic 30.0%
!! GTTTTAAATAGCAACTAGAG+TGG + chr4_1:47342281-47342300 None:intergenic 30.0%
! CACCTTTTATAACAGAACAA+TGG + chr4_1:47342303-47342322 None:intergenic 30.0%
TAGAGGTGAAATGAAAGTTA+AGG + chr4_1:47342412-47342431 None:intergenic 30.0%
!!! GGCTACTCTGTTTTTATTTA+TGG + chr4_1:47342446-47342465 None:intergenic 30.0%
! ATATGCTGATTGGTTGAAAT+TGG + chr4_1:47342472-47342491 None:intergenic 30.0%
! AAAAGCATGGTTGGAAAAAA+TGG + chr4_1:47342652-47342671 None:intergenic 30.0%
! ATGATGAAGAGAGGTATATT+GGG + chr4_1:47342691-47342710 None:intergenic 30.0%
! ATATATTTTTCCAGTTCACG+TGG - chr4_1:47342726-47342745 Msa0551370:intron 30.0%
! TCTGTTGAACAGTTTGAAAT+TGG - chr4_1:47342886-47342905 Msa0551370:five_prime_UTR 30.0%
TTCTCTTCCATTTCTTAGTT+AGG - chr4_1:47342915-47342934 Msa0551370:five_prime_UTR 30.0%
TCTCTTCCATTTCTTAGTTA+GGG - chr4_1:47342916-47342935 Msa0551370:five_prime_UTR 30.0%
! AAAGAAAGGTGTATTTGCAT+GGG + chr4_1:47342942-47342961 None:intergenic 30.0%
! TAAAGAAAGGTGTATTTGCA+TGG + chr4_1:47342943-47342962 None:intergenic 30.0%
! CAGTCTAAGATATTAGCTTA+TGG + chr4_1:47343061-47343080 None:intergenic 30.0%
TATATAAACAGGAAGATACC+AGG + chr4_1:47343449-47343468 None:intergenic 30.0%
ATCTCCTCAAAAGAAAGTTT+GGG + chr4_1:47343550-47343569 None:intergenic 30.0%
CAGTAATTCAAAAAGCTCAA+TGG + chr4_1:47343728-47343747 None:intergenic 30.0%
! TTTTGAATTACTGTCTCGAA+TGG - chr4_1:47343735-47343754 Msa0551370:intron 30.0%
TGATTCTGCTTTATAACTGA+GGG + chr4_1:47343901-47343920 None:intergenic 30.0%
TACAGACATAATTAGCTACA+TGG + chr4_1:47344077-47344096 None:intergenic 30.0%
! TTACACTATTTGAGCTTTGT+AGG - chr4_1:47344146-47344165 Msa0551370:intron 30.0%
! TCATAATCTCAAGTCTTATC+TGG - chr4_1:47344195-47344214 Msa0551370:intron 30.0%
!! CTTTCTTTTTGAAAAGGCAA+AGG + chr4_1:47344438-47344457 None:intergenic 30.0%
! TATAAAGTGTCCGTATCTTA+TGG + chr4_1:47344551-47344570 None:intergenic 30.0%
TAAGATACGGACACTTTATA+TGG - chr4_1:47344551-47344570 Msa0551370:intron 30.0%
GGATTACTATAGTCAACAAT+GGG + chr4_1:47344853-47344872 None:intergenic 30.0%
AGGATTACTATAGTCAACAA+TGG + chr4_1:47344854-47344873 None:intergenic 30.0%
TCAAACAATAGGAAGACTAA+AGG + chr4_1:47344927-47344946 None:intergenic 30.0%
! GCCTTTATTTGCTAATAACT+AGG - chr4_1:47345262-47345281 Msa0551370:intron 30.0%
GCCTAGTTATTAGCAAATAA+AGG + chr4_1:47345266-47345285 None:intergenic 30.0%
!! TTGAAAGTTCTGGAGTTTAA+AGG - chr4_1:47345431-47345450 Msa0551370:intron 30.0%
!! TGAAAGTTCTGGAGTTTAAA+GGG - chr4_1:47345432-47345451 Msa0551370:intron 30.0%
GGTTAACATAGATAAGGTTA+CGG + chr4_1:47345460-47345479 None:intergenic 30.0%
ACCTTATCTATGTTAACCTT+TGG - chr4_1:47345462-47345481 Msa0551370:intron 30.0%
TCCAAAGGTTAACATAGATA+AGG + chr4_1:47345466-47345485 None:intergenic 30.0%
!! TTTGTTTTCTTTTGCATTGG+TGG + chr4_1:47345539-47345558 None:intergenic 30.0%
!!! CTCTTTGTTTTCTTTTGCAT+TGG + chr4_1:47345542-47345561 None:intergenic 30.0%
GCAAAAGAAAACAAAGAGAA+AGG - chr4_1:47345544-47345563 Msa0551370:intron 30.0%
! TATACTATTTTCGACCTAGA+TGG - chr4_1:47345679-47345698 Msa0551370:five_prime_UTR 30.0%
! TTTATAAGCAAGCTTTAACG+CGG + chr4_1:47345727-47345746 None:intergenic 30.0%
GAACAAACCAAACTATATTC+AGG + chr4_1:47345995-47346014 None:intergenic 30.0%
CGCAACACAATATAACTAAG+TGG - chr4_1:47334928-47334947 Msa0551370:three_prime_UTR 35.0%
TTTGAAAACCCAGATCTATC+TGG - chr4_1:47335123-47335142 Msa0551370:three_prime_UTR 35.0%
ACAAAAGAGATTATCCGATC+TGG + chr4_1:47335196-47335215 None:intergenic 35.0%
GTGAAAACTGAATGAAAAGG+GGG + chr4_1:47335431-47335450 None:intergenic 35.0%
CCAGTGAAAACTGAATGAAA+AGG + chr4_1:47335434-47335453 None:intergenic 35.0%
! CCTTTTCATTCAGTTTTCAC+TGG - chr4_1:47335431-47335450 Msa0551370:exon 35.0%
CGATCCAGAACTACAAAATT+CGG + chr4_1:47335478-47335497 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCG+TGG - chr4_1:47335478-47335497 Msa0551370:CDS 35.0%
!!! ATTTTGTAGTTCTGGATCGT+GGG - chr4_1:47335479-47335498 Msa0551370:CDS 35.0%
GAAAACTGAATGAGGTGAAA+AGG + chr4_1:47335594-47335613 None:intergenic 35.0%
CGATCCAGAACTACAAAATT+AGG + chr4_1:47335478-47335497 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCG+AGG - chr4_1:47335478-47335497 Msa0551370:CDS 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG - chr4_1:47335793-47335812 Msa0551370:intron 35.0%
CGATCCAGAACTACAAAATT+CGG + chr4_1:47335478-47335497 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCG+AGG - chr4_1:47335478-47335497 Msa0551370:CDS 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG - chr4_1:47335793-47335812 Msa0551370:intron 35.0%
AGAATCTGCTCTTCAATTAC+GGG + chr4_1:47336490-47336509 None:intergenic 35.0%
CAGAATCTGCTCTTCAATTA+CGG + chr4_1:47336491-47336510 None:intergenic 35.0%
!!! TGGTTTTAAACGCTTACTCT+TGG - chr4_1:47336533-47336552 Msa0551370:intron 35.0%
!!! GGTTTTAAACGCTTACTCTT+GGG - chr4_1:47336534-47336553 Msa0551370:intron 35.0%
TAAACTTACGTTCCTGTATC+AGG + chr4_1:47336682-47336701 None:intergenic 35.0%
! AACGTAAGTTTAAAACGTGC+TGG - chr4_1:47336690-47336709 Msa0551370:intron 35.0%
! ACGTAAGTTTAAAACGTGCT+GGG - chr4_1:47336691-47336710 Msa0551370:intron 35.0%
GAGATGAAGAAGAACATAGA+AGG - chr4_1:47336871-47336890 Msa0551370:intron 35.0%
ATGAAGAAGAACATAGAAGG+TGG - chr4_1:47336874-47336893 Msa0551370:intron 35.0%
CTATGGCAACTGAAAAGAAA+CGG + chr4_1:47336946-47336965 None:intergenic 35.0%
!!! GTTATGGCTGGCTTTTTAAT+TGG - chr4_1:47336983-47337002 Msa0551370:intron 35.0%
!!! TGGCTTTTTAATTGGGTTGA+TGG - chr4_1:47336991-47337010 Msa0551370:intron 35.0%
!!! CTTTTTAATTGGGTTGATGG+TGG - chr4_1:47336994-47337013 Msa0551370:intron 35.0%
!!! CTTTTTGGTTTACTGTTCCT+TGG - chr4_1:47337047-47337066 Msa0551370:intron 35.0%
ACTCAAACCTTGAAAAGTTG+GGG + chr4_1:47337397-47337416 None:intergenic 35.0%
GACTCAAACCTTGAAAAGTT+GGG + chr4_1:47337398-47337417 None:intergenic 35.0%
TGACTCAAACCTTGAAAAGT+TGG + chr4_1:47337399-47337418 None:intergenic 35.0%
TGAACTTAATTTCAGAGGCA+CGG - chr4_1:47337684-47337703 Msa0551370:intron 35.0%
TGTGTTTGAAGACACTTGAA+GGG - chr4_1:47337787-47337806 Msa0551370:CDS 35.0%
AAACAGAATGAACAGCATTG+AGG + chr4_1:47337925-47337944 None:intergenic 35.0%
!! ATATGAAGCTTTAAGAGCTC+TGG - chr4_1:47338328-47338347 Msa0551370:CDS 35.0%
!! TGGCAGATTACTTACTTTTG+GGG + chr4_1:47338437-47338456 None:intergenic 35.0%
!! CTGGCAGATTACTTACTTTT+GGG + chr4_1:47338438-47338457 None:intergenic 35.0%
! TCTGGCAGATTACTTACTTT+TGG + chr4_1:47338439-47338458 None:intergenic 35.0%
GGAGGTAATAACAATTGATC+TGG + chr4_1:47338457-47338476 None:intergenic 35.0%
TGTTATTACCTCCCTTTACA+TGG - chr4_1:47338464-47338483 Msa0551370:intron 35.0%
! ATATTTTCTTACCCCATCCT+CGG - chr4_1:47338527-47338546 Msa0551370:intron 35.0%
! AATTTCATTTTCCGAGGATG+GGG + chr4_1:47338541-47338560 None:intergenic 35.0%
! GAATTTCATTTTCCGAGGAT+GGG + chr4_1:47338542-47338561 None:intergenic 35.0%
! TGAATTTCATTTTCCGAGGA+TGG + chr4_1:47338543-47338562 None:intergenic 35.0%
!! TTGATTTGTTCCCAATACCA+TGG + chr4_1:47338680-47338699 None:intergenic 35.0%
GTTCCTGAACATTGTAAACA+TGG - chr4_1:47339012-47339031 Msa0551370:intron 35.0%
TAGCCATGTTTACAATGTTC+AGG + chr4_1:47339018-47339037 None:intergenic 35.0%
TGGCTAATTCTATCCAGAAA+TGG - chr4_1:47339032-47339051 Msa0551370:intron 35.0%
GGCTAATTCTATCCAGAAAT+GGG - chr4_1:47339033-47339052 Msa0551370:intron 35.0%
ATAGTGATGATAAAGCGGAA+CGG - chr4_1:47339300-47339319 Msa0551370:intron 35.0%
! TGGCATTGAATGGTATCAAA+AGG + chr4_1:47339331-47339350 None:intergenic 35.0%
! ATTTGAGGTATGGCATTGAA+TGG + chr4_1:47339341-47339360 None:intergenic 35.0%
GACTAATTCTATCCAGAAAC+GGG - chr4_1:47339867-47339886 Msa0551370:intron 35.0%
TTAAAGACTCCCGTGAATTT+CGG + chr4_1:47339983-47340002 None:intergenic 35.0%
ATAGTGATGATAAAGCGGAA+CGG - chr4_1:47339300-47339319 Msa0551370:intron 35.0%
! TGGCATTGAATGGTATCAAA+AGG + chr4_1:47339331-47339350 None:intergenic 35.0%
!! TTGATTTGTTCCCAATACCA+CGG + chr4_1:47338680-47338699 None:intergenic 35.0%
!!! CATGAATTTTGGGTTTGTTG+TGG + chr4_1:47340810-47340829 None:intergenic 35.0%
CACAACAAACCCAAAATTCA+TGG - chr4_1:47340808-47340827 Msa0551370:intron 35.0%
ATGGGAGTCTTAAAGTCATA+AGG - chr4_1:47340827-47340846 Msa0551370:intron 35.0%
ATAGTGATGATAAAGCGGAA+CGG - chr4_1:47339300-47339319 Msa0551370:intron 35.0%
! TGGCATTGAATGGTATCAAA+AGG + chr4_1:47339331-47339350 None:intergenic 35.0%
ATGGTTCTTATAACACCCAA+AGG - chr4_1:47341153-47341172 Msa0551370:intron 35.0%
TAACACCCAAAGGACATTTA+AGG - chr4_1:47341163-47341182 Msa0551370:intron 35.0%
AACACCCAAAGGACATTTAA+GGG - chr4_1:47341164-47341183 Msa0551370:intron 35.0%
GAAAAAAGGGAAAGGAGAAA+GGG + chr4_1:47341487-47341506 None:intergenic 35.0%
AGAAAAAAGGGAAAGGAGAA+AGG + chr4_1:47341488-47341507 None:intergenic 35.0%
CTCTTAACTGGTAGCTATTT+CGG + chr4_1:47341805-47341824 None:intergenic 35.0%
TTATGGGTTTCATGTGATAG+AGG + chr4_1:47342429-47342448 None:intergenic 35.0%
! CTGATTGGTTGAAATTGGTA+TGG + chr4_1:47342467-47342486 None:intergenic 35.0%
CATCAGATGCAAAGAAATGA+TGG - chr4_1:47342509-47342528 Msa0551370:intron 35.0%
CACAAATAAGAGGTTAAGGT+TGG + chr4_1:47342606-47342625 None:intergenic 35.0%
TGAAAAGCTGCACAAATAAG+AGG + chr4_1:47342616-47342635 None:intergenic 35.0%
! GATGATGAAGAGAGGTATAT+TGG + chr4_1:47342692-47342711 None:intergenic 35.0%
TTATTTGTGAAACACTCCCT+GGG + chr4_1:47342772-47342791 None:intergenic 35.0%
CTAAGAAATGGAAGAGAACT+TGG + chr4_1:47342913-47342932 None:intergenic 35.0%
! GATATTAGCTTATGGCCATT+TGG + chr4_1:47343053-47343072 None:intergenic 35.0%
TGCCTCTTCAAATTCTTGAA+CGG - chr4_1:47343132-47343151 Msa0551370:intron 35.0%
! ACCTGAAGCTTTGTGTTATT+GGG - chr4_1:47343157-47343176 Msa0551370:intron 35.0%
AAGTTTGGGAGTTGAAATTC+TGG + chr4_1:47343536-47343555 None:intergenic 35.0%
! AACTCCCAAACTTTCTTTTG+AGG - chr4_1:47343543-47343562 Msa0551370:intron 35.0%
GATCTCCTCAAAAGAAAGTT+TGG + chr4_1:47343551-47343570 None:intergenic 35.0%
! AAGTAGCTTGCACAAATTTG+AGG - chr4_1:47343608-47343627 Msa0551370:intron 35.0%
TACGATGCAGATAAAAGAAC+CGG + chr4_1:47343787-47343806 None:intergenic 35.0%
ATTACACTCTTTAGTCCACA+TGG - chr4_1:47343811-47343830 Msa0551370:intron 35.0%
!!! AGTCCACATGGTGAATTTTT+TGG - chr4_1:47343823-47343842 Msa0551370:intron 35.0%
CTTCCAAAAAATTCACCATG+TGG + chr4_1:47343829-47343848 None:intergenic 35.0%
GATTCTGCTTTATAACTGAG+GGG + chr4_1:47343900-47343919 None:intergenic 35.0%
CTGATTCTGCTTTATAACTG+AGG + chr4_1:47343902-47343921 None:intergenic 35.0%
ACATAATTAGCTACATGGTG+TGG + chr4_1:47344072-47344091 None:intergenic 35.0%
! CTATTTGAGCTTTGTAGGTT+CGG - chr4_1:47344151-47344170 Msa0551370:intron 35.0%
! TATTTGAGCTTTGTAGGTTC+GGG - chr4_1:47344152-47344171 Msa0551370:intron 35.0%
GAGATTATGACATAGATGCA+AGG + chr4_1:47344185-47344204 None:intergenic 35.0%
CTTTACTTCCAGTCACAATT+AGG + chr4_1:47344226-47344245 None:intergenic 35.0%
TTATCAACGTATAAGGACAC+CGG + chr4_1:47344271-47344290 None:intergenic 35.0%
TTGGTACTCTCCATAAGATA+CGG - chr4_1:47344538-47344557 Msa0551370:intron 35.0%
TCTCTGTGATCATACTCTTA+AGG - chr4_1:47344732-47344751 Msa0551370:intron 35.0%
TGTGGAGTATAGATGTCTTT+CGG - chr4_1:47344755-47344774 Msa0551370:intron 35.0%
GAAGACTACTTACATTACAC+TGG - chr4_1:47344894-47344913 Msa0551370:intron 35.0%
AAACAGAATGAACAGCATTG+AGG + chr4_1:47337925-47337944 None:intergenic 35.0%
!! ACTATATTTTCTGAAGGGTG+AGG - chr4_1:47345323-47345342 Msa0551370:intron 35.0%
GAGGAACTGAGAAAACTTAT+CGG - chr4_1:47345342-47345361 Msa0551370:intron 35.0%
GAACTGCATTCAATGTAAAC+TGG + chr4_1:47345372-47345391 None:intergenic 35.0%
ATGCAGTTCCAAAACACAAA+AGG - chr4_1:47345383-47345402 Msa0551370:intron 35.0%
TGAAGATCACAAAATGGAAC+AGG + chr4_1:47345579-47345598 None:intergenic 35.0%
AAGGACTGAAGATCACAAAA+TGG + chr4_1:47345585-47345604 None:intergenic 35.0%
AACATCAAGCTATTTGTCTC+TGG - chr4_1:47345746-47345765 Msa0551370:intron 35.0%
GTACAACTATTGTGTTTCTC+TGG - chr4_1:47345813-47345832 Msa0551370:intron 35.0%
TAACTAAGCCAACTGAACTT+TGG + chr4_1:47346082-47346101 None:intergenic 35.0%
! GCAGTAGTCATAAGGTTTTA+TGG + chr4_1:47346111-47346130 None:intergenic 35.0%
!! TGTCTTTGAAACCCACGTTT+AGG - chr4_1:47334968-47334987 Msa0551370:three_prime_UTR 40.0%
! TTTGAAACCCACGTTTAGGT+TGG - chr4_1:47334972-47334991 Msa0551370:three_prime_UTR 40.0%
TGCGAAATTGCAGACAGATT+GGG + chr4_1:47335001-47335020 None:intergenic 40.0%
CCATCTGGTTGTTCAAAAGA+AGG + chr4_1:47335033-47335052 None:intergenic 40.0%
! CCTTCTTTTGAACAACCAGA+TGG - chr4_1:47335030-47335049 Msa0551370:three_prime_UTR 40.0%
!! GGTTGTTCTAAAGGAGATTG+AGG + chr4_1:47335175-47335194 None:intergenic 40.0%
!! CTCCTTTAGAACAACCAGAT+CGG - chr4_1:47335179-47335198 Msa0551370:three_prime_UTR 40.0%
ATCCGATCTGGTTGTTCTAA+AGG + chr4_1:47335184-47335203 None:intergenic 40.0%
!!! AATTTTGTAGCTCTGGATCG+AGG - chr4_1:47335320-47335339 Msa0551370:three_prime_UTR 40.0%
!!! ATTTTGTAGCTCTGGATCGA+GGG - chr4_1:47335321-47335340 Msa0551370:three_prime_UTR 40.0%
CTACAGGTGAAAACTGAATG+AGG + chr4_1:47335602-47335621 None:intergenic 40.0%
CTACAGGTGAAAACTGAATG+AGG + chr4_1:47335602-47335621 None:intergenic 40.0%
TGTATGTATCAGGTATCTCC+AGG - chr4_1:47335833-47335852 Msa0551370:CDS 40.0%
!!! TTTTGTAGTTCTGGATCGAG+GGG - chr4_1:47335794-47335813 Msa0551370:intron 40.0%
GCAGGGATATTGTTTGTATC+AGG - chr4_1:47335988-47336007 Msa0551370:CDS 40.0%
! GCAGAGATGTTGTTTGTATC+AGG - chr4_1:47336318-47336337 Msa0551370:intron 40.0%
AGCAAAAACGAACCCAAGTA+GGG + chr4_1:47336636-47336655 None:intergenic 40.0%
!! GTTCGTTTTTGCTCACTTTG+TGG - chr4_1:47336643-47336662 Msa0551370:intron 40.0%
! TTTTTGCTCACTTTGTGGTC+AGG - chr4_1:47336648-47336667 Msa0551370:intron 40.0%
CTTCTTTCTCTTCACGTGAT+GGG + chr4_1:47336805-47336824 None:intergenic 40.0%
TCTTCTTTCTCTTCACGTGA+TGG + chr4_1:47336806-47336825 None:intergenic 40.0%
GAAGACAAACAATGGCAGAA+AGG - chr4_1:47336838-47336857 Msa0551370:intron 40.0%
AAGAAGAACATAGAAGGTGG+CGG - chr4_1:47336877-47336896 Msa0551370:intron 40.0%
AACGGATCTGAGCACTAAAA+AGG + chr4_1:47336928-47336947 None:intergenic 40.0%
!! GTTGATGGTGGTAGTTTCTT+TGG - chr4_1:47337006-47337025 Msa0551370:intron 40.0%
! TTTGGTTTACTGTTCCTTGG+TGG - chr4_1:47337050-47337069 Msa0551370:intron 40.0%
TTGGTTTACTGTTCCTTGGT+GGG - chr4_1:47337051-47337070 Msa0551370:intron 40.0%
!! TGTACGTGACTTTTGGAGAA+TGG - chr4_1:47337078-47337097 Msa0551370:intron 40.0%
!! TTTTGGAGAATGGTGGTTCT+TGG - chr4_1:47337088-47337107 Msa0551370:intron 40.0%
TTCCTGACTACATTGCTCTT+GGG - chr4_1:47337364-47337383 Msa0551370:intron 40.0%
CTCAAACCTTGAAAAGTTGG+GGG + chr4_1:47337396-47337415 None:intergenic 40.0%
GTGCAAAATTGCAGATGGAA+AGG + chr4_1:47337537-47337556 None:intergenic 40.0%
GTGTGTTTGAAGACACTTGA+AGG - chr4_1:47337786-47337805 Msa0551370:CDS 40.0%
!!! AGTGCTTGGTGTTTTCTTGA+TGG - chr4_1:47337957-47337976 Msa0551370:intron 40.0%
! TCTTGATGGCTACAATGCTA+AGG - chr4_1:47337971-47337990 Msa0551370:intron 40.0%
! GTTTGATGGCACTTCTTGAT+CGG - chr4_1:47338121-47338140 Msa0551370:intron 40.0%
! TTTGATGGCACTTCTTGATC+GGG - chr4_1:47338122-47338141 Msa0551370:intron 40.0%
!! AGCTTTAAGAGCTCTGGATT+CGG - chr4_1:47338334-47338353 Msa0551370:CDS 40.0%
ATGAGCATCTATCTCTTCCT+CGG + chr4_1:47338387-47338406 None:intergenic 40.0%
TCATCCTGTCCACAAATACA+AGG - chr4_1:47338403-47338422 Msa0551370:intron 40.0%
GAAACCTTGTATTTGTGGAC+AGG + chr4_1:47338410-47338429 None:intergenic 40.0%
GTCCACAAATACAAGGTTTC+TGG - chr4_1:47338410-47338429 Msa0551370:intron 40.0%
GACCAGAAACCTTGTATTTG+TGG + chr4_1:47338415-47338434 None:intergenic 40.0%
GTCAAAATCCATGTAAAGGG+AGG + chr4_1:47338475-47338494 None:intergenic 40.0%
TTCATTCTGTGATACGCACT+TGG + chr4_1:47338833-47338852 None:intergenic 40.0%
AATTTCTGCAGTTACACCTG+AGG - chr4_1:47338929-47338948 Msa0551370:intron 40.0%
TTAAAGACTCCCCTGAACTT+CGG + chr4_1:47339149-47339168 None:intergenic 40.0%
AGGGGAGTCTTTAAGTCATA+AGG - chr4_1:47339155-47339174 Msa0551370:intron 40.0%
!! TTGATTTGTTCCCACTACCA+CGG + chr4_1:47339491-47339510 None:intergenic 40.0%
TTCATTCTGTGATACGCACT+TGG + chr4_1:47338833-47338852 None:intergenic 40.0%
CACAACAAACCCGAAATTCA+CGG - chr4_1:47339970-47339989 Msa0551370:intron 40.0%
ACAACAAACCCGAAATTCAC+GGG - chr4_1:47339971-47339990 Msa0551370:intron 40.0%
TAAAGACTCCCGTGAATTTC+GGG + chr4_1:47339982-47340001 None:intergenic 40.0%
ACGGGAGTCTTTAAGTCATA+AGG - chr4_1:47339989-47340008 Msa0551370:intron 40.0%
TTCATTCTGTGATACGCACT+TGG + chr4_1:47338833-47338852 None:intergenic 40.0%
TATGTAACCTCGAAGCTTTG+TGG - chr4_1:47340628-47340647 Msa0551370:intron 40.0%
! ATGTAACCTCGAAGCTTTGT+GGG - chr4_1:47340629-47340648 Msa0551370:intron 40.0%
GTTCCTGAACATTGTAAACG+TGG - chr4_1:47340684-47340703 Msa0551370:intron 40.0%
TAGCCACGTTTACAATGTTC+AGG + chr4_1:47340690-47340709 None:intergenic 40.0%
TGGCTAATTCAGTCCAGAAA+CGG - chr4_1:47340704-47340723 Msa0551370:intron 40.0%
TGAACTTAATTTCGGAGGCA+CGG - chr4_1:47341286-47341305 Msa0551370:intron 40.0%
! TTAACTGGTAGCTATTTCGG+TGG + chr4_1:47341802-47341821 None:intergenic 40.0%
TACAAGTTACTGCCTATAGC+AGG + chr4_1:47341851-47341870 None:intergenic 40.0%
GATTGGATGATGTGGATGAT+AGG - chr4_1:47341980-47341999 Msa0551370:intron 40.0%
GTTGTAGCACTGTTGTATAG+CGG + chr4_1:47342156-47342175 None:intergenic 40.0%
TGTCTATGCTACAGAGCTAT+AGG - chr4_1:47342254-47342273 Msa0551370:intron 40.0%
GTCTATGCTACAGAGCTATA+GGG - chr4_1:47342255-47342274 Msa0551370:intron 40.0%
GCTGCACAAATAAGAGGTTA+AGG + chr4_1:47342610-47342629 None:intergenic 40.0%
AGCATGGTTGGAAAAAATGG+TGG + chr4_1:47342649-47342668 None:intergenic 40.0%
! AGCATTCACAAAAGCATGGT+TGG + chr4_1:47342661-47342680 None:intergenic 40.0%
! ACCATGCTTTTGTGAATGCT+TGG - chr4_1:47342661-47342680 Msa0551370:five_prime_UTR 40.0%
! CCATGCTTTTGTGAATGCTT+GGG - chr4_1:47342662-47342681 Msa0551370:five_prime_UTR 40.0%
! CATGCTTTTGTGAATGCTTG+GGG - chr4_1:47342663-47342682 Msa0551370:five_prime_UTR 40.0%
!! AGAAGCTTGATGATGAAGAG+AGG + chr4_1:47342700-47342719 None:intergenic 40.0%
TCAGGTTATTGCATATTCCC+AGG - chr4_1:47342752-47342771 Msa0551370:intron 40.0%
CAGGTTATTGCATATTCCCA+GGG - chr4_1:47342753-47342772 Msa0551370:intron 40.0%
CTTATTTGTGAAACACTCCC+TGG + chr4_1:47342773-47342792 None:intergenic 40.0%
CAGAGACAAATCAGAACAGT+GGG + chr4_1:47342870-47342889 None:intergenic 40.0%
ACAGAGACAAATCAGAACAG+TGG + chr4_1:47342871-47342890 None:intergenic 40.0%
GACCGTTCAAGAATTTGAAG+AGG + chr4_1:47343137-47343156 None:intergenic 40.0%
! CACCTGAAGCTTTGTGTTAT+TGG - chr4_1:47343156-47343175 Msa0551370:intron 40.0%
TCCCAATAACACAAAGCTTC+AGG + chr4_1:47343161-47343180 None:intergenic 40.0%
! CCATGTTATATTGTGCCGTT+AGG + chr4_1:47343321-47343340 None:intergenic 40.0%
CCTAACGGCACAATATAACA+TGG - chr4_1:47343318-47343337 Msa0551370:intron 40.0%
TAAACAGGAAGATACCAGGA+GGG + chr4_1:47343445-47343464 None:intergenic 40.0%
ATAAACAGGAAGATACCAGG+AGG + chr4_1:47343446-47343465 None:intergenic 40.0%
TCATTATCTGCTGCTAGTTC+CGG - chr4_1:47343765-47343784 Msa0551370:intron 40.0%
CTGATGGTACAGTCAAAAAG+TGG + chr4_1:47343860-47343879 None:intergenic 40.0%
TACCATCAGTTCAAAAGTCC+AGG - chr4_1:47343871-47343890 Msa0551370:intron 40.0%
! TACCTGGACTTTTGAACTGA+TGG + chr4_1:47343876-47343895 None:intergenic 40.0%
TTTATAACTGAGGGGATACC+TGG + chr4_1:47343892-47343911 None:intergenic 40.0%
CTTCCAGTCACAATTAGGTA+TGG + chr4_1:47344221-47344240 None:intergenic 40.0%
ATGACCTTAACACAGTGCAT+TGG + chr4_1:47344310-47344329 None:intergenic 40.0%
! GTTAGGTTGTTGGAATCAGA+AGG - chr4_1:47344365-47344384 Msa0551370:intron 40.0%
TCAGAAGGTCCAAGTTGTAT+TGG - chr4_1:47344380-47344399 Msa0551370:intron 40.0%
!! ATACCGACTCCAATACAACT+TGG + chr4_1:47344392-47344411 None:intergenic 40.0%
AGTTGTATTGGAGTCGGTAT+AGG - chr4_1:47344392-47344411 Msa0551370:intron 40.0%
!! GTCGCGCTTTCTTTTTGAAA+AGG + chr4_1:47344444-47344463 None:intergenic 40.0%
!!! AAGCGCGACATCTTTTTTAG+TGG - chr4_1:47344455-47344474 Msa0551370:intron 40.0%
!!! ACATCTTTTTTAGTGGCAGC+AGG - chr4_1:47344462-47344481 Msa0551370:intron 40.0%
GTGATCATACTCTTAAGGTG+TGG - chr4_1:47344737-47344756 Msa0551370:intron 40.0%
TGTTTGGAGACTTCCAGATA+TGG - chr4_1:47345014-47345033 Msa0551370:intron 40.0%
GTTTGGAGACTTCCAGATAT+GGG - chr4_1:47345015-47345034 Msa0551370:intron 40.0%
CATCAGATATAGCCCATATC+TGG + chr4_1:47345030-47345049 None:intergenic 40.0%
! CAGATATGGGCTATATCTGA+TGG - chr4_1:47345028-47345047 Msa0551370:five_prime_UTR 40.0%
TCGTGTTTGAAGACACTTGA+AGG - chr4_1:47345059-47345078 Msa0551370:intron 40.0%
CGTGTTTGAAGACACTTGAA+GGG - chr4_1:47345060-47345079 Msa0551370:intron 40.0%
GTTCATTCTGTTTGTAGCTC+TGG - chr4_1:47345203-47345222 Msa0551370:five_prime_UTR 40.0%
CCTTCACATTCTGTATCCAA+AGG + chr4_1:47345481-47345500 None:intergenic 40.0%
CCTTTGGATACAGAATGTGA+AGG - chr4_1:47345478-47345497 Msa0551370:intron 40.0%
!!! TGTGAAGGCCGTTTTTGATT+CGG - chr4_1:47345493-47345512 Msa0551370:intron 40.0%
! CTTGATGGCCGAATCAAAAA+CGG + chr4_1:47345504-47345523 None:intergenic 40.0%
AACAAAGAGAAAGGGGCAAA+AGG - chr4_1:47345553-47345572 Msa0551370:intron 40.0%
GTCCTTCGTATTGTAGTTCA+TGG - chr4_1:47345599-47345618 Msa0551370:intron 40.0%
CTCCATGAACTACAATACGA+AGG + chr4_1:47345604-47345623 None:intergenic 40.0%
CTTCGTATTGTAGTTCATGG+AGG - chr4_1:47345602-47345621 Msa0551370:intron 40.0%
TGGCAAAAACTACCAGGAAA+TGG + chr4_1:47345643-47345662 None:intergenic 40.0%
TCAGAATGGCAAAAACTACC+AGG + chr4_1:47345649-47345668 None:intergenic 40.0%
! ACTATTTTCGACCTAGATGG+AGG - chr4_1:47345682-47345701 Msa0551370:intron 40.0%
CAAATGGTCATCTCCATTTG+TGG - chr4_1:47345861-47345880 Msa0551370:intron 40.0%
TCATCTCCATTTGTGGACAT+GGG - chr4_1:47345868-47345887 Msa0551370:intron 40.0%
GTAAAACCCATGTCCACAAA+TGG + chr4_1:47345877-47345896 None:intergenic 40.0%
TACATGCAGTACAGCCACTT+AGG + chr4_1:47334904-47334923 None:intergenic 45.0%
TGGGTTTCCAACCTAAACGT+GGG + chr4_1:47334982-47335001 None:intergenic 45.0%
TTGGGTTTCCAACCTAAACG+TGG + chr4_1:47334983-47335002 None:intergenic 45.0%
GTGCGAAATTGCAGACAGAT+TGG + chr4_1:47335002-47335021 None:intergenic 45.0%
CTGGGTTTCCAGATAGATCT+GGG + chr4_1:47335134-47335153 None:intergenic 45.0%
TCTGGGTTTCCAGATAGATC+TGG + chr4_1:47335135-47335154 None:intergenic 45.0%
TCTATCTGGAAACCCAGATC+TGG - chr4_1:47335137-47335156 Msa0551370:three_prime_UTR 45.0%
AAGTGCAAGTTGCCAGATCT+GGG + chr4_1:47335152-47335171 None:intergenic 45.0%
! GCAGGGATGTTGTTTGTATC+AGG - chr4_1:47335351-47335370 Msa0551370:three_prime_UTR 45.0%
TAAACGCTTACTCTTGGGCA+AGG - chr4_1:47336539-47336558 Msa0551370:intron 45.0%
GCAAAAACGAACCCAAGTAG+GGG + chr4_1:47336635-47336654 None:intergenic 45.0%
GAGCAAAAACGAACCCAAGT+AGG + chr4_1:47336637-47336656 None:intergenic 45.0%
! AGTTTAAAACGTGCTGGGCT+TGG - chr4_1:47336696-47336715 Msa0551370:intron 45.0%
TGGGCTTGGCTTAAGTGATT+TGG - chr4_1:47336710-47336729 Msa0551370:intron 45.0%
GGGCTTGGCTTAAGTGATTT+GGG - chr4_1:47336711-47336730 Msa0551370:intron 45.0%
! GTGATTTGGGCTTAACGAAC+CGG - chr4_1:47336724-47336743 Msa0551370:intron 45.0%
! TGATTTGGGCTTAACGAACC+GGG - chr4_1:47336725-47336744 Msa0551370:intron 45.0%
!!! GGTTATATTTTGACCCGACC+CGG + chr4_1:47336746-47336765 None:intergenic 45.0%
GGTCGGGTCAAAATATAACC+CGG - chr4_1:47336746-47336765 Msa0551370:intron 45.0%
GTGGCGGCTGCAAAAAAATA+GGG - chr4_1:47336893-47336912 Msa0551370:intron 45.0%
AACACGCAGCTGTACAACTA+TGG + chr4_1:47336963-47336982 None:intergenic 45.0%
! TGTACAGCTGCGTGTTGTTA+TGG - chr4_1:47336967-47336986 Msa0551370:intron 45.0%
TCTCCAAAAGTCACGTACAG+AGG + chr4_1:47337077-47337096 None:intergenic 45.0%
!! ACGTGACTTTTGGAGAATGG+TGG - chr4_1:47337081-47337100 Msa0551370:intron 45.0%
TAGGATCGAGGAACGTAACA+CGG + chr4_1:47337305-47337324 None:intergenic 45.0%
AACGAGTTCCTACGTAGGAA+CGG + chr4_1:47337346-47337365 None:intergenic 45.0%
GTTCCTGACTACATTGCTCT+TGG - chr4_1:47337363-47337382 Msa0551370:intron 45.0%
ACCTTGAAAAGTTGGGGGTA+GGG + chr4_1:47337391-47337410 None:intergenic 45.0%
AACCTTGAAAAGTTGGGGGT+AGG + chr4_1:47337392-47337411 None:intergenic 45.0%
GTTCATTCTGTTTGCAGCTC+TGG - chr4_1:47337932-47337951 Msa0551370:intron 45.0%
TTCTTGGCCACACAGAACTA+CGG - chr4_1:47338058-47338077 Msa0551370:intron 45.0%
! TATGCAACCGTAGTTCTGTG+TGG + chr4_1:47338068-47338087 None:intergenic 45.0%
! GATCGGGAGTTTGATGATCT+AGG - chr4_1:47338138-47338157 Msa0551370:intron 45.0%
ATCTCTTCCTCGGACATAGA+AGG + chr4_1:47338377-47338396 None:intergenic 45.0%
GATATCAAATCTGCAGGCCA+TGG - chr4_1:47338660-47338679 Msa0551370:intron 45.0%
AAATCTGCAGGCCATGGTAT+TGG - chr4_1:47338666-47338685 Msa0551370:intron 45.0%
AATCTGCAGGCCATGGTATT+GGG - chr4_1:47338667-47338686 Msa0551370:intron 45.0%
! ATGTAGCCTCGAAGCTTTGT+AGG - chr4_1:47338957-47338976 Msa0551370:intron 45.0%
GTAGGAGGAACAGAGATTGT+CGG - chr4_1:47338975-47338994 Msa0551370:intron 45.0%
CTATGCACTAGTCCCATTTC+TGG + chr4_1:47339048-47339067 None:intergenic 45.0%
TTTCACAAGAGCCTCGACTT+CGG + chr4_1:47339074-47339093 None:intergenic 45.0%
CACAACAAACCCGAAGTTCA+GGG - chr4_1:47339136-47339155 Msa0551370:intron 45.0%
ACAACAAACCCGAAGTTCAG+GGG - chr4_1:47339137-47339156 Msa0551370:intron 45.0%
TAAAGACTCCCCTGAACTTC+GGG + chr4_1:47339148-47339167 None:intergenic 45.0%
AATTTCTGCAGTTACACCCG+AGG - chr4_1:47339763-47339782 Msa0551370:intron 45.0%
TCGAGGCTACATACAATCCT+CGG + chr4_1:47338949-47338968 None:intergenic 45.0%
! ATGTAGCCTCGAAGCTTTGT+AGG - chr4_1:47338957-47338976 Msa0551370:intron 45.0%
GTAGGAGGAACAGAGATTGT+CGG - chr4_1:47338975-47338994 Msa0551370:intron 45.0%
TTTCACAAGAGCCTCGACTT+CGG + chr4_1:47339074-47339093 None:intergenic 45.0%
!! CGTGAATTTCGGGTTTGTTG+TGG + chr4_1:47339972-47339991 None:intergenic 45.0%
GATATAGAATCTGTAGGCCG+TGG - chr4_1:47340305-47340324 Msa0551370:intron 45.0%
AATCTGTAGGCCGTGGTATT+GGG - chr4_1:47340312-47340331 Msa0551370:intron 45.0%
AATTTCGGCAGTTACACCTG+AGG - chr4_1:47340601-47340620 Msa0551370:intron 45.0%
CGAGGTTACATACAATCCTC+AGG + chr4_1:47340620-47340639 None:intergenic 45.0%
GGCTAATTCAGTCCAGAAAC+GGG - chr4_1:47340705-47340724 Msa0551370:intron 45.0%
TTTCACAAGAGCCTCGACTT+CGG + chr4_1:47339074-47339093 None:intergenic 45.0%
GGAAGGCAGTCAAGAAAACA+AGG + chr4_1:47341466-47341485 None:intergenic 45.0%
AAAGGGAAAGGAGAAAGGGA+AGG + chr4_1:47341483-47341502 None:intergenic 45.0%
CAGATGGAAAGGAAAGCTCA+AGG + chr4_1:47341568-47341587 None:intergenic 45.0%
GTGCATAATCGCAGATGGAA+AGG + chr4_1:47341579-47341598 None:intergenic 45.0%
TTGTCGTGCATAATCGCAGA+TGG + chr4_1:47341584-47341603 None:intergenic 45.0%
GTTTACTACTCATCTTGGCC+TGG - chr4_1:47341934-47341953 Msa0551370:intron 45.0%
! CACAGAAGGCATGAAATTCC+AGG + chr4_1:47341955-47341974 None:intergenic 45.0%
ATGCCTTCTGTGACACTGAT+TGG - chr4_1:47341963-47341982 Msa0551370:intron 45.0%
CATCCAATCAGTGTCACAGA+AGG + chr4_1:47341969-47341988 None:intergenic 45.0%
! GTGACACTGATTGGATGATG+TGG - chr4_1:47341972-47341991 Msa0551370:intron 45.0%
! AGGATATCGTAGTCTAGCTC+TGG - chr4_1:47342000-47342019 Msa0551370:intron 45.0%
TGGCAACTACTGAACTACTG+TGG - chr4_1:47342020-47342039 Msa0551370:intron 45.0%
GGCAACTACTGAACTACTGT+GGG - chr4_1:47342021-47342040 Msa0551370:intron 45.0%
CCCAAGCATTCACAAAAGCA+TGG + chr4_1:47342665-47342684 None:intergenic 45.0%
AGACAAATCAGAACAGTGGG+TGG + chr4_1:47342867-47342886 None:intergenic 45.0%
CATGGGCCCTAACTAAGAAA+TGG + chr4_1:47342925-47342944 None:intergenic 45.0%
!! GCTTTCTGGTTTCGTCCAAA+TGG - chr4_1:47343035-47343054 Msa0551370:five_prime_UTR 45.0%
GTGAATTCAGACTCGCAAGT+GGG + chr4_1:47343214-47343233 None:intergenic 45.0%
TGTGAATTCAGACTCGCAAG+TGG + chr4_1:47343215-47343234 None:intergenic 45.0%
ACTTGCGAGTCTGAATTCAC+AGG - chr4_1:47343214-47343233 Msa0551370:intron 45.0%
CTTGCGAGTCTGAATTCACA+GGG - chr4_1:47343215-47343234 Msa0551370:intron 45.0%
TGCTTGGCTGACATCATCAT+GGG + chr4_1:47343242-47343261 None:intergenic 45.0%
TTGCTTGGCTGACATCATCA+TGG + chr4_1:47343243-47343262 None:intergenic 45.0%
! ATGATGATGTCAGCCAAGCA+AGG - chr4_1:47343242-47343261 Msa0551370:intron 45.0%
AAAGTGGTTCAAGAGCTGCA+TGG + chr4_1:47343359-47343378 None:intergenic 45.0%
GGGTACGATGATGAAGAAAC+TGG + chr4_1:47343424-47343443 None:intergenic 45.0%
AAACAGGAAGATACCAGGAG+GGG + chr4_1:47343444-47343463 None:intergenic 45.0%
! GCTTTGTAGGTTCGGGTTTA+CGG - chr4_1:47344159-47344178 Msa0551370:intron 45.0%
TGGCCATACCTAATTGTGAC+TGG - chr4_1:47344215-47344234 Msa0551370:intron 45.0%
GCTTCCAATGCACTGTGTTA+AGG - chr4_1:47344303-47344322 Msa0551370:intron 45.0%
ACCTAACCTGTACAGCATGT+GGG + chr4_1:47344352-47344371 None:intergenic 45.0%
AACCTAACCTGTACAGCATG+TGG + chr4_1:47344353-47344372 None:intergenic 45.0%
! TGCTGTACAGGTTAGGTTGT+TGG - chr4_1:47344355-47344374 Msa0551370:intron 45.0%
GGTCCAAGTTGTATTGGAGT+CGG - chr4_1:47344386-47344405 Msa0551370:intron 45.0%
ATAGGTCACATGTGAGCTGT+TGG - chr4_1:47344410-47344429 Msa0551370:intron 45.0%
TAGATGTCTTTCGGACGATG+TGG - chr4_1:47344764-47344783 Msa0551370:intron 45.0%
TGTCTTCAAACACGACTCAC+GGG + chr4_1:47345054-47345073 None:intergenic 45.0%
GTGTCTTCAAACACGACTCA+CGG + chr4_1:47345055-47345074 None:intergenic 45.0%
!!! CGTTTTTGATTCGGCCATCA+AGG - chr4_1:47345502-47345521 Msa0551370:five_prime_UTR 45.0%
TGGCTGTAGAACTACCTTGA+TGG + chr4_1:47345519-47345538 None:intergenic 45.0%
ACATGACAGTAGCCATTTCC+TGG - chr4_1:47345628-47345647 Msa0551370:intron 45.0%
AGCTATTTGTCTCTGGCTGA+AGG - chr4_1:47345753-47345772 Msa0551370:intron 45.0%
GTCATCTCCATTTGTGGACA+TGG - chr4_1:47345867-47345886 Msa0551370:intron 45.0%
!! GGAAGTGCTTGCAACTTATG+CGG - chr4_1:47345918-47345937 Msa0551370:intron 45.0%
!! TTTATTCATATTATAAAATA+TGG + chr4_1:47340459-47340478 None:intergenic 5.0%
GAAGTGCAAGTTGCCAGATC+TGG + chr4_1:47335153-47335172 None:intergenic 50.0%
!! GCAGGGGTGTTGTATGAATC+AGG - chr4_1:47335509-47335528 Msa0551370:CDS 50.0%
GGATTGAGGGACACAATGCA+GGG - chr4_1:47335641-47335660 Msa0551370:CDS 50.0%
GATTGAGGGACACAATGCAG+GGG - chr4_1:47335642-47335661 Msa0551370:CDS 50.0%
!! GCAGGGGTGTTGTATGTATC+AGG - chr4_1:47335658-47335677 Msa0551370:CDS 50.0%
TACTCTTGGGCAAGGTAGTC+AGG - chr4_1:47336547-47336566 Msa0551370:intron 50.0%
AAAACGAACCCAAGTAGGGG+CGG + chr4_1:47336632-47336651 None:intergenic 50.0%
CAGGAACGAGTTCCTGATAC+AGG - chr4_1:47336667-47336686 Msa0551370:intron 50.0%
!! CGTGATGGGTTGTTTGAGTG+AGG + chr4_1:47336791-47336810 None:intergenic 50.0%
! GGTGGCGGCTGCAAAAAAAT+AGG - chr4_1:47336892-47336911 Msa0551370:intron 50.0%
GGTTCGTAAGAACCCACTCA+AGG + chr4_1:47337284-47337303 None:intergenic 50.0%
AGTTCCTACGTAGGAACGGT+GGG + chr4_1:47337342-47337361 None:intergenic 50.0%
TCAGGAACGAGTTCCTACGT+AGG + chr4_1:47337351-47337370 None:intergenic 50.0%
GTCCCAAGAGCAATGTAGTC+AGG + chr4_1:47337369-47337388 None:intergenic 50.0%
! ACCCTACCCCCAACTTTTCA+AGG - chr4_1:47337387-47337406 Msa0551370:intron 50.0%
! ATGGAAAGGCGACAAGTTGG+AGG + chr4_1:47337523-47337542 None:intergenic 50.0%
CAGATGGAAAGGCGACAAGT+TGG + chr4_1:47337526-47337545 None:intergenic 50.0%
TGTTACCCGTGCGTTTCTTG+TGG - chr4_1:47337839-47337858 Msa0551370:CDS 50.0%
TCCTACCACAAGAAACGCAC+GGG + chr4_1:47337847-47337866 None:intergenic 50.0%
CTCCTACCACAAGAAACGCA+CGG + chr4_1:47337848-47337867 None:intergenic 50.0%
! GTAGTTCTGTGTGGCCAAGA+AGG + chr4_1:47338059-47338078 None:intergenic 50.0%
CTTGCAAGTGCTATCGATGG+AGG + chr4_1:47338093-47338112 None:intergenic 50.0%
TACTGCACCTTCTATGTCCG+AGG - chr4_1:47338367-47338386 Msa0551370:CDS 50.0%
CGAGGCTACATACAATCCTC+AGG + chr4_1:47338948-47338967 None:intergenic 50.0%
! TAGCCTCGAAGCTTTGTAGG+AGG - chr4_1:47338960-47338979 Msa0551370:intron 50.0%
GTTCCTCCTACAAAGCTTCG+AGG + chr4_1:47338966-47338985 None:intergenic 50.0%
!! CCTGAACTTCGGGTTTGTTG+TGG + chr4_1:47339138-47339157 None:intergenic 50.0%
CCACAACAAACCCGAAGTTC+AGG - chr4_1:47339135-47339154 Msa0551370:intron 50.0%
GATATCAAATCTGCAGGCCG+TGG - chr4_1:47339471-47339490 Msa0551370:five_prime_UTR 50.0%
CGAGGCTACATACAATCCTC+GGG + chr4_1:47338948-47338967 None:intergenic 50.0%
! TAGCCTCGAAGCTTTGTAGG+AGG - chr4_1:47338960-47338979 Msa0551370:intron 50.0%
GTTCCTCCTACAAAGCTTCG+AGG + chr4_1:47338966-47338985 None:intergenic 50.0%
GAATCTGTAGGCCGTGGTAT+TGG - chr4_1:47340311-47340330 Msa0551370:intron 50.0%
! TAACCTCGAAGCTTTGTGGG+AGG - chr4_1:47340632-47340651 Msa0551370:intron 50.0%
CTATGCACTAGTCCCGTTTC+TGG + chr4_1:47340720-47340739 None:intergenic 50.0%
CTGAACTACTGTGGGCCTAT+TGG - chr4_1:47342029-47342048 Msa0551370:intron 50.0%
! ACTGTGGGCCTATTGGTTAG+TGG - chr4_1:47342036-47342055 Msa0551370:intron 50.0%
! CTGTGGGCCTATTGGTTAGT+GGG - chr4_1:47342037-47342056 Msa0551370:intron 50.0%
! TGTGGGCCTATTGGTTAGTG+GGG - chr4_1:47342038-47342057 Msa0551370:intron 50.0%
ACTCACCCCCACTAACCAAT+AGG + chr4_1:47342047-47342066 None:intergenic 50.0%
ATTGGTTAGTGGGGGTGAGT+TGG - chr4_1:47342047-47342066 Msa0551370:intron 50.0%
TTCCAGTTCACGTGGAGATC+AGG - chr4_1:47342734-47342753 Msa0551370:intron 50.0%
AACCTGATCTCCACGTGAAC+TGG + chr4_1:47342739-47342758 None:intergenic 50.0%
TACCGTGATCGCCAGAAATG+AGG - chr4_1:47342840-47342859 Msa0551370:five_prime_UTR 50.0%
!! GTCCTCATTTCTGGCGATCA+CGG + chr4_1:47342845-47342864 None:intergenic 50.0%
GCTTGGCTGACATCATCATG+GGG + chr4_1:47343241-47343260 None:intergenic 50.0%
TGTCAGCCAAGCAAGGTACA+AGG - chr4_1:47343249-47343268 Msa0551370:intron 50.0%
GTCAGCCAAGCAAGGTACAA+GGG - chr4_1:47343250-47343269 Msa0551370:intron 50.0%
AGGTACCCTTGTACCTTGCT+TGG + chr4_1:47343258-47343277 None:intergenic 50.0%
TAGGCAGATTGATGGAGGCA+TGG + chr4_1:47343302-47343321 None:intergenic 50.0%
GCCTCCATCAATCTGCCTAA+CGG - chr4_1:47343303-47343322 Msa0551370:intron 50.0%
! TGTGCCGTTAGGCAGATTGA+TGG + chr4_1:47343310-47343329 None:intergenic 50.0%
ACAATGCCCACATGCTGTAC+AGG - chr4_1:47344343-47344362 Msa0551370:intron 50.0%
GATGTGGCAGCTCCAATTTG+TGG - chr4_1:47344780-47344799 Msa0551370:intron 50.0%
AGCTCCAATTTGTGGCTCTC+AGG - chr4_1:47344788-47344807 Msa0551370:intron 50.0%
CCAACCTGAGAGCCACAAAT+TGG + chr4_1:47344795-47344814 None:intergenic 50.0%
CCAATTTGTGGCTCTCAGGT+TGG - chr4_1:47344792-47344811 Msa0551370:intron 50.0%
ACAAGCAGTGCGATCCTGAT+TGG + chr4_1:47344995-47345014 None:intergenic 50.0%
AGGATCGCACTGCTTGTGTT+TGG - chr4_1:47344998-47345017 Msa0551370:intron 50.0%
TGTTACCCGTGCGTTTCTTG+TGG - chr4_1:47337839-47337858 Msa0551370:CDS 50.0%
TCCTACCACAAGAAACGCAC+GGG + chr4_1:47337847-47337866 None:intergenic 50.0%
CTCCTACCACAAGAAACGCA+CGG + chr4_1:47337848-47337867 None:intergenic 50.0%
!! TTGTAGCTCTGGCTAGTGCT+TGG - chr4_1:47345214-47345233 Msa0551370:intron 50.0%
TTAACGCGGTCAGTTGGACA+TGG + chr4_1:47345713-47345732 None:intergenic 50.0%
! CAAGCTTTAACGCGGTCAGT+TGG + chr4_1:47345719-47345738 None:intergenic 50.0%
GCTTGCAACTTATGCGGCTT+TGG - chr4_1:47345924-47345943 Msa0551370:intron 50.0%
CGGATTGAGGGACACAATGC+AGG - chr4_1:47335640-47335659 Msa0551370:CDS 55.0%
!! GCTGGGGTGCTGTATGTATC+AGG - chr4_1:47335823-47335842 Msa0551370:CDS 55.0%
GATCGAGGGGACACATTGCA+GGG - chr4_1:47335971-47335990 Msa0551370:CDS 55.0%
TAGATCTCGGGACACGATGC+AGG - chr4_1:47336140-47336159 Msa0551370:intron 55.0%
AGATCTCGGGACACGATGCA+GGG - chr4_1:47336141-47336160 Msa0551370:intron 55.0%
CGTTCCTACGTACCAGCACT+CGG + chr4_1:47336574-47336593 None:intergenic 55.0%
TTGGGCTTAACGAACCGGGT+CGG - chr4_1:47336729-47336748 Msa0551370:intron 55.0%
! CAGCTGCGTGTTGTTATGGC+TGG - chr4_1:47336971-47336990 Msa0551370:intron 55.0%
! GGGCCTCTGTACGTGACTTT+TGG - chr4_1:47337071-47337090 Msa0551370:intron 55.0%
GAGTTCCTACGTAGGAACGG+TGG + chr4_1:47337343-47337362 None:intergenic 55.0%
ACCCGTGCGTTTCTTGTGGT+AGG - chr4_1:47337843-47337862 Msa0551370:CDS 55.0%
CGTGCGTTTCTTGTGGTAGG+AGG - chr4_1:47337846-47337865 Msa0551370:CDS 55.0%
! TTGCAGCTCTGGCTAGTGCT+TGG - chr4_1:47337943-47337962 Msa0551370:intron 55.0%
CGGCTTGCAAGTGCTATCGA+TGG + chr4_1:47338096-47338115 None:intergenic 55.0%
TCGATAGCACTTGCAAGCCG+AGG - chr4_1:47338096-47338115 Msa0551370:intron 55.0%
CGATAGCACTTGCAAGCCGA+GGG - chr4_1:47338097-47338116 Msa0551370:intron 55.0%
! GAAGTGCCATCAAACGCCCT+CGG + chr4_1:47338116-47338135 None:intergenic 55.0%
GTGCATAGAAGCCGAAGTCG+AGG - chr4_1:47339060-47339079 Msa0551370:intron 55.0%
AAATCTGCAGGCCGTGGTAG+TGG - chr4_1:47339477-47339496 Msa0551370:intron 55.0%
AATCTGCAGGCCGTGGTAGT+GGG - chr4_1:47339478-47339497 Msa0551370:intron 55.0%
GTGGATAGAAGCCGAAGTCG+AGG - chr4_1:47339894-47339913 Msa0551370:intron 55.0%
GTTCCTCCCACAAAGCTTCG+AGG + chr4_1:47340638-47340657 None:intergenic 55.0%
GTGGGAGGAACAGAGATTGC+CGG - chr4_1:47340647-47340666 Msa0551370:intron 55.0%
GTGCATAGAAGCCGAAGTCG+AGG - chr4_1:47339060-47339079 Msa0551370:intron 55.0%
! GTGGGCCTATTGGTTAGTGG+GGG - chr4_1:47342039-47342058 Msa0551370:intron 55.0%
CAGTGGGTGGTCCTCATTTC+TGG + chr4_1:47342854-47342873 None:intergenic 55.0%
GCCGTTAGGCAGATTGATGG+AGG + chr4_1:47343307-47343326 None:intergenic 55.0%
CTTCATCATCGTACCCCTCC+TGG - chr4_1:47343428-47343447 Msa0551370:intron 55.0%
GCCCACATGCTGTACAGGTT+AGG - chr4_1:47344348-47344367 Msa0551370:intron 55.0%
ACCCGTGCGTTTCTTGTGGT+AGG - chr4_1:47337843-47337862 Msa0551370:CDS 55.0%
CGTGCGTTTCTTGTGGTAGG+AGG - chr4_1:47337846-47337865 Msa0551370:CDS 55.0%
ACATGGCGGTTCCTCCATCT+AGG + chr4_1:47345696-47345715 None:intergenic 55.0%
TGGATCGAGGGACACGATGC+AGG - chr4_1:47335333-47335352 Msa0551370:three_prime_UTR 60.0%
GGATCGAGGGACACGATGCA+GGG - chr4_1:47335334-47335353 Msa0551370:three_prime_UTR 60.0%
TGGATCGTGGGACACGATGC+AGG - chr4_1:47335491-47335510 Msa0551370:CDS 60.0%
GGATCGTGGGACACGATGCA+GGG - chr4_1:47335492-47335511 Msa0551370:CDS 60.0%
GATCGTGGGACACGATGCAG+GGG - chr4_1:47335493-47335512 Msa0551370:CDS 60.0%
TGGATCGAGGGACACGATGC+TGG - chr4_1:47335333-47335352 Msa0551370:three_prime_UTR 60.0%
GGATCGAGGGACACGATGCT+GGG - chr4_1:47335806-47335825 Msa0551370:intron 60.0%
GATCGAGGGACACGATGCTG+GGG - chr4_1:47335807-47335826 Msa0551370:intron 60.0%
GGATCGAGGGGACACATTGC+AGG - chr4_1:47335970-47335989 Msa0551370:CDS 60.0%
GATCTCGGGACACGATGCAG+GGG - chr4_1:47336142-47336161 Msa0551370:intron 60.0%
AGGTAGTCAGGACCGAGTGC+TGG - chr4_1:47336559-47336578 Msa0551370:intron 60.0%
!! AGGACCGAGTGCTGGTACGT+AGG - chr4_1:47336567-47336586 Msa0551370:intron 60.0%
TGGGCTTAACGAACCGGGTC+GGG - chr4_1:47336730-47336749 Msa0551370:intron 60.0%
TCACGTACAGAGGCCCACCA+AGG + chr4_1:47337067-47337086 None:intergenic 60.0%
GGTGAAGGGACGTAGGATCG+AGG + chr4_1:47337317-47337336 None:intergenic 60.0%
!! AGGAACGGTGGGCTGGTGAA+GGG + chr4_1:47337331-47337350 None:intergenic 60.0%
!! TAGGAACGGTGGGCTGGTGA+AGG + chr4_1:47337332-47337351 None:intergenic 60.0%
GGCTGCTGCTGCATGAGCTT+GGG + chr4_1:47338031-47338050 None:intergenic 60.0%
TGGCTGCTGCTGCATGAGCT+TGG + chr4_1:47338032-47338051 None:intergenic 60.0%
TGTGTGGCCAAGAAGGCCAC+TGG + chr4_1:47338052-47338071 None:intergenic 60.0%
!! TGCAAGCCGAGGGCGTTTGA+TGG - chr4_1:47338107-47338126 Msa0551370:intron 60.0%
ACGCGGTCAGTTGGACATGG+CGG + chr4_1:47345710-47345729 None:intergenic 60.0%
AAGTAGGGGCGGAGCACGGT+GGG + chr4_1:47336621-47336640 None:intergenic 65.0%
ACCGTGCTCCGCCCCTACTT+GGG - chr4_1:47336621-47336640 Msa0551370:intron 65.0%
ACCCAAGTAGGGGCGGAGCA+CGG + chr4_1:47336625-47336644 None:intergenic 65.0%
!! GTGGGCTGGTGAAGGGACGT+AGG + chr4_1:47337324-47337343 None:intergenic 65.0%
CCTACGTAGGAACGGTGGGC+TGG + chr4_1:47337338-47337357 None:intergenic 65.0%
CCAGCCCACCGTTCCTACGT+AGG - chr4_1:47337335-47337354 Msa0551370:intron 65.0%
GCTCATGCAGCAGCAGCCAG+TGG - chr4_1:47338033-47338052 Msa0551370:intron 65.0%
GCAGCAGCCAGTGGCCTTCT+TGG - chr4_1:47338042-47338061 Msa0551370:intron 65.0%
AGTAGGGGCGGAGCACGGTG+GGG + chr4_1:47336620-47336639 None:intergenic 70.0%
CAAGTAGGGGCGGAGCACGG+TGG + chr4_1:47336622-47336641 None:intergenic 70.0%
CACCGTGCTCCGCCCCTACT+TGG - chr4_1:47336620-47336639 Msa0551370:intron 70.0%
GCGGAGCACGGTGGGGAAGC+TGG + chr4_1:47336613-47336632 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 47334891 47346137 47334891 ID=Msa0551370;Name=Msa0551370
chr4_1 mRNA 47334891 47346137 47334891 ID=Msa0551370-mRNA-1;Parent=Msa0551370;Name=Msa0551370-mRNA-1;_AED=0.34;_eAED=0.34;_QI=890|0.66|0.81|0.93|0.2|0.37|16|545|239
chr4_1 exon 47334891 47335537 47334891 ID=Msa0551370-mRNA-1:exon:12803;Parent=Msa0551370-mRNA-1
chr4_1 exon 47335624 47335689 47335624 ID=Msa0551370-mRNA-1:exon:12802;Parent=Msa0551370-mRNA-1
chr4_1 exon 47335817 47336028 47335817 ID=Msa0551370-mRNA-1:exon:12801;Parent=Msa0551370-mRNA-1
chr4_1 exon 47336215 47336274 47336215 ID=Msa0551370-mRNA-1:exon:12800;Parent=Msa0551370-mRNA-1
chr4_1 exon 47337765 47337908 47337765 ID=Msa0551370-mRNA-1:exon:12799;Parent=Msa0551370-mRNA-1
chr4_1 exon 47338273 47338399 47338273 ID=Msa0551370-mRNA-1:exon:12798;Parent=Msa0551370-mRNA-1
chr4_1 exon 47339386 47339490 47339386 ID=Msa0551370-mRNA-1:exon:12797;Parent=Msa0551370-mRNA-1
chr4_1 exon 47342587 47342708 47342587 ID=Msa0551370-mRNA-1:exon:12796;Parent=Msa0551370-mRNA-1
chr4_1 exon 47342817 47343079 47342817 ID=Msa0551370-mRNA-1:exon:12795;Parent=Msa0551370-mRNA-1
chr4_1 exon 47344689 47344731 47344689 ID=Msa0551370-mRNA-1:exon:12794;Parent=Msa0551370-mRNA-1
chr4_1 exon 47344860 47344891 47344860 ID=Msa0551370-mRNA-1:exon:12793;Parent=Msa0551370-mRNA-1
chr4_1 exon 47345019 47345062 47345019 ID=Msa0551370-mRNA-1:exon:12792;Parent=Msa0551370-mRNA-1
chr4_1 exon 47345184 47345226 47345184 ID=Msa0551370-mRNA-1:exon:12791;Parent=Msa0551370-mRNA-1
chr4_1 exon 47345498 47345540 47345498 ID=Msa0551370-mRNA-1:exon:12790;Parent=Msa0551370-mRNA-1
chr4_1 exon 47345656 47345698 47345656 ID=Msa0551370-mRNA-1:exon:12789;Parent=Msa0551370-mRNA-1
chr4_1 exon 47345977 47346137 47345977 ID=Msa0551370-mRNA-1:exon:12788;Parent=Msa0551370-mRNA-1
chr4_1 five_prime_UTR 47345977 47346137 47345977 ID=Msa0551370-mRNA-1:five_prime_utr;Parent=Msa0551370-mRNA-1
chr4_1 five_prime_UTR 47345656 47345698 47345656 ID=Msa0551370-mRNA-1:five_prime_utr;Parent=Msa0551370-mRNA-1
chr4_1 five_prime_UTR 47345498 47345540 47345498 ID=Msa0551370-mRNA-1:five_prime_utr;Parent=Msa0551370-mRNA-1
chr4_1 five_prime_UTR 47345184 47345226 47345184 ID=Msa0551370-mRNA-1:five_prime_utr;Parent=Msa0551370-mRNA-1
chr4_1 five_prime_UTR 47345019 47345062 47345019 ID=Msa0551370-mRNA-1:five_prime_utr;Parent=Msa0551370-mRNA-1
chr4_1 five_prime_UTR 47344860 47344891 47344860 ID=Msa0551370-mRNA-1:five_prime_utr;Parent=Msa0551370-mRNA-1
chr4_1 five_prime_UTR 47344689 47344731 47344689 ID=Msa0551370-mRNA-1:five_prime_utr;Parent=Msa0551370-mRNA-1
chr4_1 five_prime_UTR 47342817 47343079 47342817 ID=Msa0551370-mRNA-1:five_prime_utr;Parent=Msa0551370-mRNA-1
chr4_1 five_prime_UTR 47342587 47342708 47342587 ID=Msa0551370-mRNA-1:five_prime_utr;Parent=Msa0551370-mRNA-1
chr4_1 five_prime_UTR 47339395 47339490 47339395 ID=Msa0551370-mRNA-1:five_prime_utr;Parent=Msa0551370-mRNA-1
chr4_1 CDS 47339386 47339394 47339386 ID=Msa0551370-mRNA-1:cds;Parent=Msa0551370-mRNA-1
chr4_1 CDS 47338273 47338399 47338273 ID=Msa0551370-mRNA-1:cds;Parent=Msa0551370-mRNA-1
chr4_1 CDS 47337765 47337908 47337765 ID=Msa0551370-mRNA-1:cds;Parent=Msa0551370-mRNA-1
chr4_1 CDS 47336215 47336274 47336215 ID=Msa0551370-mRNA-1:cds;Parent=Msa0551370-mRNA-1
chr4_1 CDS 47335817 47336028 47335817 ID=Msa0551370-mRNA-1:cds;Parent=Msa0551370-mRNA-1
chr4_1 CDS 47335624 47335689 47335624 ID=Msa0551370-mRNA-1:cds;Parent=Msa0551370-mRNA-1
chr4_1 CDS 47335436 47335537 47335436 ID=Msa0551370-mRNA-1:cds;Parent=Msa0551370-mRNA-1
chr4_1 three_prime_UTR 47334891 47335435 47334891 ID=Msa0551370-mRNA-1:three_prime_utr;Parent=Msa0551370-mRNA-1
Gene Sequence

>Msa0551370

ATGTTTAAGCTTTTCAATAAATCAGTCCACCATTTTTTCCAACCATGCTTTTGTGAATGCTTGGGGATCCCAATATACCTCTCTTCATCATCAAGCTTCTTGTTGTATATATTTTTCCAGTTCACGTGGAGATCAGCACTGAAGTTATTGCCTCTTCAAATTCTTGAACGGTCACCTGAAGCTTTGTGTTATTGGGAAGCTGAATATTTTCACAATCGTAGAACACTCCCACTTGCGAGTCTGAATTCACAGGGCCCCATGATGATGTCAGCCAAGCAAGGTGTGGAGTATAGATGTCTTTCGGACGATGTGGCAGCTCCAATTTGTGGCTCTCAGGTTGGATCGCACTGCTTGTGTTTGGAGACTTCCAGATATGGGCTATATCTGATGGCCCGTGAGTCGTGTTTGAAGACACTTGAAGGGCACATTTCAAGTGTGTTAACAGCACTTTGTTACCCGTGCGTTTCTTGTGGTAGGAGGCTACCTATATCTGATTTTGTTCTTTTCATACATTTTAATTGCTTGTGTGATCACCTCAATGCTGTTCATTCTGGTGAGGAACTGAGAAAACTTATCGGTGCTCCAGTTTACATTGAATGCAGTTCCAAAACACAAAAGAATGTGAAGGCCGTTTTTGATTCGGCCATCAAGGTAGTTCTACAGCCACCAATGCAAAAGAAAACAAAGAGAAAGGGGCAAAAGGCCTGTTCCATTTTGTGA
Protein sequence

>Msa0551370

MFKLFNKSVHHFFQPCFCECLGIPIYLSSSSSFLLYIFFQFTWRSALKLLPLQILERSPEALCYWEAEYFHNRRTLPLASLNSQGPMMMSAKQGVEYRCLSDDVAAPICGSQVGSHCLCLETSRYGLYLMARESCLKTLEGHISSVLTALCYPCVSCGRRLPISDFVLFIHFNCLCDHLNAVHSGEELRKLIGAPVYIECSSKTQKNVKAVFDSAIKVVLQPPMQKKTKRKGQKACSIL*