Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0551760 | CBI37909.3 | 50.672 | 521 | 161 | 4 | 436 | 860 | 1 | 521 | 1.26e-151 | 481 |
Msa0551760 | CBI37909.3 | 51.251 | 999 | 312 | 11 | 13 | 853 | 3 | 984 | 0.0 | 928 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0551760 | sp|A0A1P8B760|AMI4G_ARATH | 51.368 | 475 | 168 | 6 | 24 | 446 | 22 | 485 | 7.50e-142 | 433 |
Msa0551760 | sp|A0A1P8B760|AMI4G_ARATH | 45.756 | 483 | 166 | 5 | 457 | 853 | 36 | 508 | 2.91e-120 | 377 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0551760 | A0A4S4CXS0 | 49.269 | 479 | 176 | 6 | 21 | 447 | 521 | 984 | 2.11e-128 | 420 |
Msa0551760 | A0A4S4CXS0 | 51.230 | 976 | 314 | 12 | 39 | 853 | 32 | 1006 | 0.0 | 897 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0117650 | Msa0551760 | 0.801335 | 9.451621e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0551760 | MtrunA17_Chr4g0037521 | 78.672 | 497 | 56 | 3 | 13 | 459 | 1 | 497 | 0.0 | 780 |
Msa0551760 | MtrunA17_Chr4g0037521 | 74.451 | 501 | 43 | 3 | 440 | 855 | 9 | 509 | 0.0 | 724 |
Msa0551760 | MtrunA17_Chr4g0037491 | 78.333 | 300 | 36 | 1 | 189 | 459 | 1 | 300 | 3.05e-158 | 464 |
Msa0551760 | MtrunA17_Chr4g0037491 | 70.100 | 301 | 30 | 2 | 604 | 844 | 1 | 301 | 1.39e-135 | 406 |
Msa0551760 | MtrunA17_Chr8g0377691 | 51.760 | 483 | 170 | 10 | 19 | 447 | 13 | 486 | 3.38e-149 | 449 |
Msa0551760 | MtrunA17_Chr8g0377691 | 48.347 | 484 | 156 | 9 | 457 | 853 | 32 | 508 | 2.61e-135 | 413 |
Msa0551760 | MtrunA17_Chr8g0377701 | 52.183 | 481 | 167 | 10 | 21 | 447 | 16 | 487 | 1.06e-148 | 448 |
Msa0551760 | MtrunA17_Chr8g0377701 | 49.380 | 484 | 151 | 9 | 457 | 853 | 33 | 509 | 3.01e-139 | 423 |
Msa0551760 | MtrunA17_Chr8g0377681 | 53.961 | 467 | 149 | 11 | 37 | 447 | 28 | 484 | 1.53e-148 | 447 |
Msa0551760 | MtrunA17_Chr8g0377681 | 49.174 | 484 | 153 | 8 | 457 | 853 | 29 | 506 | 9.96e-139 | 422 |
Msa0551760 | MtrunA17_Chr8g0377651 | 49.423 | 520 | 194 | 12 | 23 | 484 | 17 | 525 | 5.10e-147 | 444 |
Msa0551760 | MtrunA17_Chr8g0377651 | 48.703 | 501 | 163 | 9 | 440 | 853 | 15 | 508 | 1.57e-142 | 432 |
Msa0551760 | MtrunA17_Chr8g0377641 | 50.418 | 478 | 174 | 10 | 24 | 447 | 15 | 483 | 1.47e-145 | 440 |
Msa0551760 | MtrunA17_Chr8g0377641 | 47.581 | 496 | 165 | 10 | 457 | 864 | 29 | 517 | 5.95e-138 | 420 |
Msa0551760 | MtrunA17_Chr4g0037501 | 71.579 | 95 | 14 | 2 | 99 | 180 | 1 | 95 | 1.13e-37 | 135 |
Msa0551760 | MtrunA17_Chr4g0037501 | 83.099 | 71 | 11 | 1 | 526 | 595 | 25 | 95 | 6.59e-34 | 125 |
Msa0551760 | MtrunA17_Chr8g0377661 | 65.278 | 72 | 24 | 1 | 782 | 853 | 1 | 71 | 1.26e-22 | 92.8 |
Msa0551760 | MtrunA17_Chr8g0385461 | 32.489 | 237 | 129 | 7 | 46 | 260 | 162 | 389 | 5.60e-21 | 98.2 |
Msa0551760 | MtrunA17_Chr2g0279961 | 25.245 | 408 | 244 | 11 | 79 | 440 | 175 | 567 | 6.23e-19 | 91.7 |
Msa0551760 | MtrunA17_Chr3g0097801 | 32.955 | 264 | 152 | 6 | 45 | 294 | 56 | 308 | 1.35e-17 | 87.0 |
Msa0551760 | MtrunA17_Chr1g0191741 | 34.848 | 132 | 76 | 3 | 123 | 250 | 63 | 188 | 1.71e-12 | 70.5 |
Msa0551760 | MtrunA17_Chr3g0130801 | 29.918 | 244 | 140 | 6 | 46 | 264 | 200 | 437 | 6.91e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0551760 | AT4G34880.2 | 51.368 | 475 | 168 | 6 | 24 | 446 | 22 | 485 | 7.63e-143 | 433 |
Msa0551760 | AT4G34880.2 | 45.756 | 483 | 166 | 5 | 457 | 853 | 36 | 508 | 2.96e-121 | 377 |
Msa0551760 | AT4G34880.1 | 44.421 | 475 | 155 | 7 | 24 | 446 | 22 | 439 | 5.45e-120 | 372 |
Msa0551760 | AT4G34880.1 | 44.170 | 446 | 181 | 9 | 457 | 853 | 36 | 462 | 1.04e-108 | 342 |
Msa0551760 | AT5G07360.1 | 30.453 | 243 | 140 | 6 | 46 | 267 | 204 | 438 | 4.26e-18 | 89.7 |
Msa0551760 | AT5G07360.3 | 30.453 | 243 | 140 | 6 | 46 | 267 | 204 | 438 | 4.26e-18 | 89.7 |
Msa0551760 | AT5G64440.1 | 25.751 | 466 | 246 | 18 | 47 | 440 | 131 | 568 | 1.69e-17 | 87.8 |
Msa0551760 | AT3G25660.1 | 31.970 | 269 | 151 | 7 | 44 | 295 | 57 | 310 | 4.29e-17 | 85.9 |
Msa0551760 | AT5G07360.2 | 30.041 | 243 | 134 | 7 | 46 | 267 | 204 | 431 | 7.88e-15 | 79.3 |
Msa0551760 | AT1G08980.1 | 37.500 | 120 | 68 | 2 | 123 | 241 | 64 | 177 | 1.10e-11 | 68.6 |
Find 216 sgRNAs with CRISPR-Local
Find 476 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTATAGATACTTACTAAATT+AGG | 0.142037 | 4_1:-47907082 | None:intergenic |
ACATAAATACATACTAAAAT+AGG | 0.142863 | 4_1:-47902346 | None:intergenic |
TTCACACATGAAGAAATTTA+AGG | 0.160632 | 4_1:+47907854 | Msa0551760:CDS |
AGAAAATTTAAGCATCATTT+TGG | 0.169576 | 4_1:+47906928 | Msa0551760:CDS |
AGACTTGACTGATGGATTTC+TGG | 0.220844 | 4_1:+47907892 | Msa0551760:exon |
TTTGTAGCTTCATAATCTTT+TGG | 0.242280 | 4_1:-47901799 | None:intergenic |
GGAAGCCGGTGCCATTATTC+TGG | 0.250921 | 4_1:+47900938 | Msa0551760:CDS |
CTTTATTTGTTGAAACTAAC+TGG | 0.253674 | 4_1:-47900497 | None:intergenic |
TGCAACAGTGGTGGATAATT+TGG | 0.256591 | 4_1:+47902165 | Msa0551760:CDS |
TGCAACAGTGGTGGATAATT+TGG | 0.256591 | 4_1:+47906901 | Msa0551760:CDS |
TGCTTCTTGTATGTCTTCTA+TGG | 0.260952 | 4_1:-47904398 | None:intergenic |
GGACGCTGGTGCAATTATTC+TGG | 0.274180 | 4_1:+47904714 | Msa0551760:CDS |
TCAGAAATGACCAGCGGATT+TGG | 0.288532 | 4_1:+47907540 | Msa0551760:CDS |
AGTGACATTGGATCCTTTAT+AGG | 0.290749 | 4_1:-47901926 | None:intergenic |
CAGGAAAAGACTAAGGAATA+TGG | 0.297578 | 4_1:+47907498 | Msa0551760:intron |
TGCTTCTTGTATGTCTTCTA+TGG | 0.299553 | 4_1:-47900622 | None:intergenic |
AGAAATTTAAGGATAATATT+AGG | 0.302785 | 4_1:+47907865 | Msa0551760:CDS |
AACCAAGGCAAATCCACTTC+TGG | 0.302909 | 4_1:-47904800 | None:intergenic |
AGAAAATTTAAGCACCGTTC+TGG | 0.305636 | 4_1:+47902192 | Msa0551760:CDS |
AAACATGGTTACAGTTTCAT+TGG | 0.312250 | 4_1:+47906255 | Msa0551760:CDS |
CCTCTGGCGCACCAAGCTTC+TGG | 0.314745 | 4_1:-47901008 | None:intergenic |
TATAGATACTTACTAAATTA+GGG | 0.334177 | 4_1:-47907081 | None:intergenic |
CGCATGTGGTTTCGAAGTTA+AGG | 0.337143 | 4_1:+47900916 | Msa0551760:CDS |
AGCAGGTTCTTATGCATTGT+TGG | 0.339619 | 4_1:+47900872 | Msa0551760:intron |
ATGCCATTTGGAATCTGTTT+TGG | 0.346624 | 4_1:+47903050 | Msa0551760:CDS |
ATGCCATTTGGAATCTGTTT+TGG | 0.346624 | 4_1:+47907741 | Msa0551760:CDS |
TAACATGGTTGCAGTTTCAT+TGG | 0.354483 | 4_1:+47901480 | Msa0551760:CDS |
GGGCTCAAAGCAAAGAAAAT+AGG | 0.354870 | 4_1:+47906692 | Msa0551760:CDS |
GGTCTCAATGGAAAGAAAAT+AGG | 0.357122 | 4_1:+47901877 | Msa0551760:CDS |
GTATCTTGACGAGGTGAAAT+TGG | 0.364768 | 4_1:-47901601 | None:intergenic |
ATACTGTCCTTAAGCAAAAC+AGG | 0.367417 | 4_1:-47900822 | None:intergenic |
CAATTTGAATTCTGAAAGTA+AGG | 0.368656 | 4_1:-47902242 | None:intergenic |
CGTGACCGTTCGTTGCTTCA+TGG | 0.370142 | 4_1:+47900795 | Msa0551760:CDS |
TGCAGGGTCGTATGCATTGT+TGG | 0.370565 | 4_1:+47904648 | Msa0551760:intron |
AACATGGTTGCAGTTTCATT+GGG | 0.371572 | 4_1:+47901481 | Msa0551760:CDS |
CATAAATACATACTAAAATA+GGG | 0.375693 | 4_1:-47902345 | None:intergenic |
GTGACATTGGATCCCTTATA+AGG | 0.378616 | 4_1:-47906740 | None:intergenic |
GCAGGGTCGTATGCATTGTT+GGG | 0.378873 | 4_1:+47904649 | Msa0551760:intron |
GCAGGTTCTTATGCATTGTT+GGG | 0.382233 | 4_1:+47900873 | Msa0551760:intron |
CAGCAGCAAGTATTGGATTC+AGG | 0.382460 | 4_1:-47900707 | None:intergenic |
CAGCAGCAAGTATTGGATTC+AGG | 0.382460 | 4_1:-47904483 | None:intergenic |
CAATGTCACTTCCATCTTTG+AGG | 0.388047 | 4_1:+47901939 | Msa0551760:CDS |
CAATGTCACTTCCATCTTTG+AGG | 0.388047 | 4_1:+47906754 | Msa0551760:CDS |
GTGACATTGGATCCTTTATA+GGG | 0.389701 | 4_1:-47901925 | None:intergenic |
AACATGGTTACAGTTTCATT+GGG | 0.392812 | 4_1:+47906256 | Msa0551760:CDS |
TCCGCTTGATCTCGTGCGTC+AGG | 0.393963 | 4_1:-47904520 | None:intergenic |
GCAGCTAAGTTTATACCTTC+AGG | 0.395988 | 4_1:+47901826 | Msa0551760:CDS |
AGTCCTTGCGGGTCTAGCTT+TGG | 0.397039 | 4_1:+47901436 | Msa0551760:CDS |
TTTGATAAAGAAGAATCAAT+TGG | 0.401016 | 4_1:+47902932 | Msa0551760:CDS |
TTTGATAAAGAAGAATCAAT+TGG | 0.401016 | 4_1:+47907623 | Msa0551760:CDS |
TCTGAAACTGTCCTGCATAT+TGG | 0.401701 | 4_1:-47901739 | None:intergenic |
CACCTCGTCAAGATACTATC+AGG | 0.406082 | 4_1:+47901608 | Msa0551760:CDS |
CTCAATAAACAAGGTCTCAA+TGG | 0.407744 | 4_1:+47901865 | Msa0551760:CDS |
CTTTGAGCCCTTGTTTATTG+AGG | 0.410211 | 4_1:-47906679 | None:intergenic |
CCCCAGAAGTGGATTTGCCT+TGG | 0.418967 | 4_1:+47904798 | Msa0551760:CDS |
CCACCGTTGGACTCACTAGT+AGG | 0.419110 | 4_1:+47901566 | Msa0551760:CDS |
CTAGTCTCTCGGAGTGGTAT+GGG | 0.419677 | 4_1:+47900967 | Msa0551760:CDS |
AGTCCATGTGGGTCTAGCTT+TGG | 0.424087 | 4_1:+47906211 | Msa0551760:CDS |
TTATTTACAGCGGCATTTAG+AGG | 0.424718 | 4_1:+47904322 | Msa0551760:intron |
ACCAAGGCAAATCCACTTCT+GGG | 0.430277 | 4_1:-47904799 | None:intergenic |
TCCAACACAGCAGCAAGTAT+TGG | 0.433927 | 4_1:-47900714 | None:intergenic |
CATTGAGACCTTGTTTATTG+AGG | 0.434452 | 4_1:-47901864 | None:intergenic |
GTGACCGTTCGTTGCTTCAT+GGG | 0.437734 | 4_1:+47900796 | Msa0551760:CDS |
CCAGCTGGGACAGTGATTGC+AGG | 0.438864 | 4_1:-47907702 | None:intergenic |
GCTTCTCCAATGTTGGCAAT+TGG | 0.439223 | 4_1:+47902981 | Msa0551760:CDS |
GCTTCTCCAATGTTGGCAAT+TGG | 0.439223 | 4_1:+47907672 | Msa0551760:CDS |
GCATGTGGTTTCGAAGTTAA+GGG | 0.442919 | 4_1:+47900917 | Msa0551760:CDS |
TCCAACACAGCAGCAAGTAT+TGG | 0.446346 | 4_1:-47904490 | None:intergenic |
TCTGCTTGATCTCGAGCGTC+AGG | 0.448953 | 4_1:-47900744 | None:intergenic |
GCTAGTCTCCCCGAGTGGTA+TGG | 0.449041 | 4_1:+47904742 | Msa0551760:CDS |
ACAACTGAATTGTGATCAGC+TGG | 0.450183 | 4_1:-47901532 | None:intergenic |
GACGCTGGTGCAATTATTCT+GGG | 0.451378 | 4_1:+47904715 | Msa0551760:CDS |
CGCCAGAGGTGGATTTGCAT+TGG | 0.451539 | 4_1:+47901022 | Msa0551760:CDS |
CATGTGCTTGATGTAATTGT+TGG | 0.452305 | 4_1:+47901769 | Msa0551760:CDS |
GATAGCGAAGGAATGCCATT+TGG | 0.455549 | 4_1:+47903038 | Msa0551760:CDS |
GATAGCGAAGGAATGCCATT+TGG | 0.455549 | 4_1:+47907729 | Msa0551760:CDS |
TTTGGAAATTGAAGAGAAAG+AGG | 0.458460 | 4_1:+47906878 | Msa0551760:intron |
TGGAGTCTAAAAGTCCTTGC+GGG | 0.463261 | 4_1:+47901425 | Msa0551760:CDS |
CCTGTAACAGGAAAAGACTA+AGG | 0.463788 | 4_1:+47907491 | Msa0551760:intron |
TCTCCAATGTTGGCAATTGG+AGG | 0.468557 | 4_1:+47902984 | Msa0551760:CDS |
TCTCCAATGTTGGCAATTGG+AGG | 0.468557 | 4_1:+47907675 | Msa0551760:CDS |
CTACTGTTATGCCGAAAACT+TGG | 0.469467 | 4_1:+47904773 | Msa0551760:CDS |
CTAGTCTCCCCGAGTGGTAT+GGG | 0.470900 | 4_1:+47904743 | Msa0551760:CDS |
GCTGATCACAATTCAGTTGT+CGG | 0.471714 | 4_1:+47901535 | Msa0551760:CDS |
ACTAGTCTCTCGGAGTGGTA+TGG | 0.475334 | 4_1:+47900966 | Msa0551760:CDS |
CCAGCTGGGACAGTAATTGC+AGG | 0.476312 | 4_1:-47903011 | None:intergenic |
TGATGGATTTCTGGTGATTG+TGG | 0.478638 | 4_1:+47907901 | Msa0551760:three_prime_UTR |
TTGCGAGAGACGAGAAGATC+GGG | 0.479893 | 4_1:+47904552 | Msa0551760:CDS |
CCTGCAATCACTGTCCCAGC+TGG | 0.480272 | 4_1:+47907702 | Msa0551760:CDS |
GTCTCTCAACAAATATCTAC+AGG | 0.488811 | 4_1:+47907000 | Msa0551760:CDS |
GAAGCCGGTGCCATTATTCT+GGG | 0.492758 | 4_1:+47900939 | Msa0551760:CDS |
TCCAATACTTGCTGCTGTGT+TGG | 0.493442 | 4_1:+47900713 | Msa0551760:CDS |
AGGAAAAGACTAAGGAATAT+GGG | 0.497172 | 4_1:+47907499 | Msa0551760:intron |
CTCAAAGATGGAAGTGACAT+TGG | 0.497225 | 4_1:-47901938 | None:intergenic |
CTCAAAGATGGAAGTGACAT+TGG | 0.497225 | 4_1:-47906753 | None:intergenic |
CATGTTAGTTGCCACTGAAA+TGG | 0.497625 | 4_1:-47901464 | None:intergenic |
GTATGCATTGTTGGGGTCCA+AGG | 0.497657 | 4_1:+47904657 | Msa0551760:CDS |
TCCAATACTTGCTGCTGTGT+TGG | 0.499159 | 4_1:+47904489 | Msa0551760:CDS |
CCTTCGCTATCATATCCAGC+TGG | 0.499262 | 4_1:-47903026 | None:intergenic |
CCTTCGCTATCATATCCAGC+TGG | 0.499262 | 4_1:-47907717 | None:intergenic |
CTCTGATGCTTCTCCAATGT+TGG | 0.503905 | 4_1:+47902974 | Msa0551760:CDS |
CTCTGATGCTTCTCCAATGT+TGG | 0.503905 | 4_1:+47907665 | Msa0551760:CDS |
CGCTCGAGATCAAGCAGACA+AGG | 0.505254 | 4_1:+47900749 | Msa0551760:CDS |
TTATGCATTGTTGGGATCGA+AGG | 0.506206 | 4_1:+47900881 | Msa0551760:CDS |
GTGTGCATCACGCGGAACCT+TGG | 0.508492 | 4_1:-47904674 | None:intergenic |
CATTTCAGTGGCAACTAACA+TGG | 0.509195 | 4_1:+47901465 | Msa0551760:CDS |
TGGAGAAGCATCAGAGCCTA+TGG | 0.512587 | 4_1:-47902967 | None:intergenic |
TGGAGAAGCATCAGAGCCTA+TGG | 0.512587 | 4_1:-47907658 | None:intergenic |
GAATCAATTGGATGCAGTGT+TGG | 0.513137 | 4_1:+47902944 | Msa0551760:CDS |
GAATCAATTGGATGCAGTGT+TGG | 0.513137 | 4_1:+47907635 | Msa0551760:CDS |
CCACCAAAACAGATTCCAAA+TGG | 0.522144 | 4_1:-47903053 | None:intergenic |
CCACCAAAACAGATTCCAAA+TGG | 0.522144 | 4_1:-47907744 | None:intergenic |
GAGGGGTGGCTTCCTTGCCC+TGG | 0.526081 | 4_1:-47907823 | None:intergenic |
AACCAATGCAAATCCACCTC+TGG | 0.526339 | 4_1:-47901024 | None:intergenic |
ATTGAGATGATCCTCAAAGA+TGG | 0.532948 | 4_1:-47906765 | None:intergenic |
TACCCTCCAATTGCCAACAT+TGG | 0.534176 | 4_1:-47902987 | None:intergenic |
TACCCTCCAATTGCCAACAT+TGG | 0.534176 | 4_1:-47907678 | None:intergenic |
ACTACTGAGTTATGATCAGC+TGG | 0.535852 | 4_1:-47906307 | None:intergenic |
GAAGCTTGGTGCGCCAGAGG+TGG | 0.536770 | 4_1:+47901011 | Msa0551760:CDS |
ATTGAGATGATCCTCAAAGA+TGG | 0.537025 | 4_1:-47901950 | None:intergenic |
CGCACGAGATCAAGCGGACA+AGG | 0.540357 | 4_1:+47904525 | Msa0551760:CDS |
TTGGATGCAGTGTTGGCCAT+AGG | 0.542689 | 4_1:+47902951 | Msa0551760:CDS |
TTGGATGCAGTGTTGGCCAT+AGG | 0.542689 | 4_1:+47907642 | Msa0551760:CDS |
TGTTATGCAGAATCCTTATG+TGG | 0.546341 | 4_1:+47901405 | Msa0551760:intron |
GCTGATCATAACTCAGTAGT+GGG | 0.550144 | 4_1:+47906310 | Msa0551760:CDS |
AAAACTTGGTGCCCCAGAAG+TGG | 0.552102 | 4_1:+47904787 | Msa0551760:CDS |
TTCTTGTATGTCTTCTATGG+TGG | 0.552125 | 4_1:-47900619 | None:intergenic |
GTTTCGAAGTTAAGGGAAGC+CGG | 0.553804 | 4_1:+47900924 | Msa0551760:CDS |
ATTGCGAGAGACGAGAAGAT+CGG | 0.554005 | 4_1:+47904551 | Msa0551760:CDS |
CCTGCAATTACTGTCCCAGC+TGG | 0.555232 | 4_1:+47903011 | Msa0551760:CDS |
TTGAGCAAGCTACCAGGGCA+AGG | 0.557960 | 4_1:+47907811 | Msa0551760:CDS |
GGTTCCACGTGACGCGCATG+TGG | 0.563814 | 4_1:+47900902 | Msa0551760:CDS |
TCATCAACGCAATAGATGAA+TGG | 0.563981 | 4_1:+47904350 | Msa0551760:CDS |
ACCTGACGCACGAGATCAAG+CGG | 0.566699 | 4_1:+47904519 | Msa0551760:CDS |
GAAATCCATCAGTCAAGTCT+AGG | 0.566839 | 4_1:-47907889 | None:intergenic |
CACACGTGGTTTCTAAACTC+AGG | 0.566936 | 4_1:+47904692 | Msa0551760:CDS |
TATTTCAGTGGCAACAAACA+TGG | 0.567693 | 4_1:+47906240 | Msa0551760:CDS |
CACCGTTGGACTCACTAGTA+GGG | 0.568104 | 4_1:+47901567 | Msa0551760:CDS |
CTTTGGATCTGCTATTTCAG+TGG | 0.568573 | 4_1:+47906228 | Msa0551760:CDS |
CTAACACTGTGCCAGAAGCT+TGG | 0.569014 | 4_1:+47900997 | Msa0551760:CDS |
CTCCAATGTTGGCAATTGGA+GGG | 0.574109 | 4_1:+47902985 | Msa0551760:CDS |
CTCCAATGTTGGCAATTGGA+GGG | 0.574109 | 4_1:+47907676 | Msa0551760:CDS |
CCAGAAGCTTGGTGCGCCAG+AGG | 0.575202 | 4_1:+47901008 | Msa0551760:CDS |
TCATTTCACCACTTTGAAGA+GGG | 0.576827 | 4_1:-47902216 | None:intergenic |
TCTGGGGAAAACTAGTCTCT+CGG | 0.577590 | 4_1:+47900956 | Msa0551760:CDS |
TAGGACCTAGACTTGACTGA+TGG | 0.579631 | 4_1:+47907884 | Msa0551760:exon |
ATCATTTCACCACTTTGAAG+AGG | 0.579767 | 4_1:-47902217 | None:intergenic |
GTCGGAATCAAGCCCACCGT+TGG | 0.580429 | 4_1:+47901553 | Msa0551760:CDS |
AATCTCAGCTAGAGACCTCA+CGG | 0.580524 | 4_1:-47907038 | None:intergenic |
AGGATCATCTCAATCTGTTG+AGG | 0.582410 | 4_1:+47906774 | Msa0551760:CDS |
CTTCGCTATCATATCCAGCT+GGG | 0.583149 | 4_1:-47903025 | None:intergenic |
CTTCGCTATCATATCCAGCT+GGG | 0.583149 | 4_1:-47907716 | None:intergenic |
GTTGGACTCACTAGTAGGGC+TGG | 0.583241 | 4_1:+47901571 | Msa0551760:CDS |
ATCTCAGCTAGAGACTTCAC+AGG | 0.586005 | 4_1:-47902301 | None:intergenic |
AACAATTCCTCAATAAACAA+GGG | 0.587450 | 4_1:+47906672 | Msa0551760:CDS |
TGTCATGCAGAATCCTTATG+TGG | 0.588050 | 4_1:+47906180 | Msa0551760:intron |
TTTCCCCAGAATAATGGCAC+CGG | 0.588790 | 4_1:-47900943 | None:intergenic |
AGTTTCAACAAATAAAGAGA+TGG | 0.592489 | 4_1:+47900503 | Msa0551760:CDS |
GAACGAAACCCATACCACTC+GGG | 0.593987 | 4_1:-47904751 | None:intergenic |
AAACAATTCCTCAATAAACA+AGG | 0.596304 | 4_1:+47906671 | Msa0551760:CDS |
AGGATCATCTCAATGTGTTG+AGG | 0.596432 | 4_1:+47901959 | Msa0551760:CDS |
TAGTCTCTCGGAGTGGTATG+GGG | 0.603289 | 4_1:+47900968 | Msa0551760:CDS |
AGAAAGAGGTGCAACAGTGG+TGG | 0.605176 | 4_1:+47906892 | Msa0551760:CDS |
AGCTGATCATAACTCAGTAG+TGG | 0.607261 | 4_1:+47906309 | Msa0551760:CDS |
AGCTCATTTATTCTCCCGTG+AGG | 0.611753 | 4_1:+47907023 | Msa0551760:CDS |
GTTTCTAAACTCAGGGACGC+TGG | 0.616284 | 4_1:+47904700 | Msa0551760:CDS |
CTTTGGATCAGCCATTTCAG+TGG | 0.617090 | 4_1:+47901453 | Msa0551760:CDS |
GCTAAGTTTATACCTTCAGG+TGG | 0.620054 | 4_1:+47901829 | Msa0551760:CDS |
ATATGCAAATCAAGACAAAG+AGG | 0.620679 | 4_1:+47902142 | Msa0551760:intron |
ATCTCAGCTAGAGACCTCAC+GGG | 0.621659 | 4_1:-47907037 | None:intergenic |
ACAAAGAGGTGCAACAGTGG+TGG | 0.621804 | 4_1:+47902156 | Msa0551760:CDS |
GAAACCACATGCGCGTCACG+TGG | 0.622406 | 4_1:-47900906 | None:intergenic |
CAGGGTCGTATGCATTGTTG+GGG | 0.622566 | 4_1:+47904650 | Msa0551760:intron |
AGAACGAAACCCATACCACT+CGG | 0.623929 | 4_1:-47904752 | None:intergenic |
GGTTCCGCGTGATGCACACG+TGG | 0.626858 | 4_1:+47904678 | Msa0551760:CDS |
AACTAACTGGAATGCTACCA+TGG | 0.627095 | 4_1:-47900484 | None:intergenic |
GTGGAGTCTAAAAGTCCTTG+CGG | 0.628103 | 4_1:+47901424 | Msa0551760:CDS |
ACACGTGGTTTCTAAACTCA+GGG | 0.632832 | 4_1:+47904693 | Msa0551760:CDS |
CCAGCTGGATATGATAGCGA+AGG | 0.637953 | 4_1:+47903026 | Msa0551760:CDS |
CCAGCTGGATATGATAGCGA+AGG | 0.637953 | 4_1:+47907717 | Msa0551760:CDS |
AAGAGAAAGAGGTGCAACAG+TGG | 0.638538 | 4_1:+47906889 | Msa0551760:intron |
AAGACAAAGAGGTGCAACAG+TGG | 0.638746 | 4_1:+47902153 | Msa0551760:intron |
GTGGAGTCTAAAAGTCCATG+TGG | 0.641483 | 4_1:+47906199 | Msa0551760:CDS |
ACATGGTTGCAGTTTCATTG+GGG | 0.641691 | 4_1:+47901482 | Msa0551760:CDS |
GATCCAAAGCTAGACCCGCA+AGG | 0.645373 | 4_1:-47901439 | None:intergenic |
AACGAAACCCATACCACTCG+GGG | 0.645617 | 4_1:-47904750 | None:intergenic |
CTACTAGTGAGTCCAACGGT+GGG | 0.650363 | 4_1:-47901565 | None:intergenic |
GAAACCACGTGTGCATCACG+CGG | 0.650784 | 4_1:-47904682 | None:intergenic |
GATCCAAAGCTAGACCCACA+TGG | 0.653279 | 4_1:-47906214 | None:intergenic |
TACTGTCCTTAAGCAAAACA+GGG | 0.655683 | 4_1:-47900821 | None:intergenic |
CCAAGGCAAATCCACTTCTG+GGG | 0.656222 | 4_1:-47904798 | None:intergenic |
AAGCAATTCCTCAATAAACA+AGG | 0.659450 | 4_1:+47901856 | Msa0551760:CDS |
GTTCTGGACCCTCTTCAAAG+TGG | 0.660370 | 4_1:+47902208 | Msa0551760:CDS |
TCATGTGTGAATGAAAAGCG+AGG | 0.661031 | 4_1:-47907842 | None:intergenic |
GCTAAGTTCATACCTTCGAG+TGG | 0.662552 | 4_1:+47906644 | Msa0551760:intron |
ACATGGTTACAGTTTCATTG+GGG | 0.667069 | 4_1:+47906257 | Msa0551760:CDS |
AATTGTTTATAACCACTCGA+AGG | 0.668825 | 4_1:-47906656 | None:intergenic |
AATTGCTTATAACCACCTGA+AGG | 0.670396 | 4_1:-47901841 | None:intergenic |
CCTACTAGTGAGTCCAACGG+TGG | 0.675556 | 4_1:-47901566 | None:intergenic |
CATGTGTGAATGAAAAGCGA+GGG | 0.687889 | 4_1:-47907841 | None:intergenic |
TGGAGTCTAAAAGTCCATGT+GGG | 0.689228 | 4_1:+47906200 | Msa0551760:CDS |
ACGCTGGTGCAATTATTCTG+GGG | 0.689438 | 4_1:+47904716 | Msa0551760:CDS |
AAGCCGGTGCCATTATTCTG+GGG | 0.694883 | 4_1:+47900940 | Msa0551760:CDS |
TCATTGGGGACAGAAACTGA+TGG | 0.695584 | 4_1:+47901496 | Msa0551760:CDS |
TCATTGGGGACAGAAACTGA+TGG | 0.695584 | 4_1:+47906271 | Msa0551760:CDS |
GGATCCCATGAAGCAACGAA+CGG | 0.695610 | 4_1:-47900800 | None:intergenic |
TGTGAATGAAAAGCGAGGGG+TGG | 0.698305 | 4_1:-47907837 | None:intergenic |
AGCCCTACTAGTGAGTCCAA+CGG | 0.702539 | 4_1:-47901569 | None:intergenic |
CAACTGAATTGTGATCAGCT+GGG | 0.702745 | 4_1:-47901531 | None:intergenic |
CTGATCATAACTCAGTAGTG+GGG | 0.705432 | 4_1:+47906311 | Msa0551760:CDS |
ACTTTGAAGAGGGTCCAGAA+CGG | 0.708246 | 4_1:-47902206 | None:intergenic |
ATTGCTTCAGAAATGACCAG+CGG | 0.709496 | 4_1:+47907534 | Msa0551760:CDS |
TACCTGATAGTATCTTGACG+AGG | 0.741220 | 4_1:-47901610 | None:intergenic |
GGAAAGCTAGTCTCCCCGAG+TGG | 0.750137 | 4_1:+47904737 | Msa0551760:CDS |
ATGTGTGAATGAAAAGCGAG+GGG | 0.754399 | 4_1:-47907840 | None:intergenic |
GGAAAACTAGTCTCTCGGAG+TGG | 0.758159 | 4_1:+47900961 | Msa0551760:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATTTAAGGATAATATT+AGG | + | chr4_1:47903175-47903194 | Msa0551760:intron | 10.0% |
!! | ACAATATTACATATTTAATT+AGG | + | chr4_1:47903251-47903270 | Msa0551760:intron | 10.0% |
!! | CAATATTACATATTTAATTA+GGG | + | chr4_1:47903252-47903271 | Msa0551760:intron | 10.0% |
!! | TATTTAAATAAGATAAGATT+GGG | - | chr4_1:47904217-47904236 | None:intergenic | 10.0% |
!! | TTATTTAAATAAGATAAGAT+TGG | - | chr4_1:47904218-47904237 | None:intergenic | 10.0% |
!! | TAGTAAAAATAATTTATTGA+TGG | + | chr4_1:47905844-47905863 | Msa0551760:intron | 10.0% |
!! | TCATTTATATTTAAAAACAT+CGG | - | chr4_1:47906415-47906434 | None:intergenic | 10.0% |
!! | AAACTTTAAATTAAGATATA+GGG | + | chr4_1:47906472-47906491 | Msa0551760:intron | 10.0% |
!!! | GATTTAGAATTTAATTACAT+TGG | + | chr4_1:47901238-47901257 | Msa0551760:intron | 15.0% |
!! | ATATAATAAAACAGACAAAA+TGG | - | chr4_1:47902126-47902145 | None:intergenic | 15.0% |
!! | CATAAATACATACTAAAATA+GGG | - | chr4_1:47902348-47902367 | None:intergenic | 15.0% |
!! | ACATAAATACATACTAAAAT+AGG | - | chr4_1:47902349-47902368 | None:intergenic | 15.0% |
!! | TCAAAGATAATTTCTTAATT+TGG | - | chr4_1:47903345-47903364 | None:intergenic | 15.0% |
!!! | TAAACTTATAGTTGTTTTTA+CGG | - | chr4_1:47903430-47903449 | None:intergenic | 15.0% |
!!! | ATAATTTGTAAAGAAAGAAT+AGG | - | chr4_1:47903625-47903644 | None:intergenic | 15.0% |
!! | TATTCTTTCTTTACAAATTA+TGG | + | chr4_1:47903624-47903643 | Msa0551760:intron | 15.0% |
!! | AAAATTATCATAAAAGTTGT+CGG | + | chr4_1:47903718-47903737 | Msa0551760:intron | 15.0% |
!! | TTTATTTATTATTGTTAGTG+TGG | - | chr4_1:47905223-47905242 | None:intergenic | 15.0% |
!! | GAAACTTTAAATTAAGATAT+AGG | + | chr4_1:47906471-47906490 | Msa0551760:intron | 15.0% |
!!! | ATTCTCACATTTAAAATTAA+AGG | - | chr4_1:47906518-47906537 | None:intergenic | 15.0% |
!! | TATAGATACTTACTAAATTA+GGG | - | chr4_1:47907084-47907103 | None:intergenic | 15.0% |
!! | AGAAATTTAAGGATAATATT+AGG | + | chr4_1:47907865-47907884 | Msa0551760:CDS | 15.0% |
!! | TAACATGTTAACTTTGATAT+TGG | + | chr4_1:47901126-47901145 | Msa0551760:intron | 20.0% |
!! | AAATTTAGCATTAAATAGAG+TGG | + | chr4_1:47901266-47901285 | Msa0551760:intron | 20.0% |
!!! | TTCCCACATTTAAAATTAAA+GGG | - | chr4_1:47901694-47901713 | None:intergenic | 20.0% |
!!! | ATTCCCACATTTAAAATTAA+AGG | - | chr4_1:47901695-47901714 | None:intergenic | 20.0% |
!!! | TATGTATATATATTTTGCAC+AGG | + | chr4_1:47901716-47901735 | Msa0551760:intron | 20.0% |
!!! | ATTATAATTAACTTGAGCTA+AGG | - | chr4_1:47902440-47902459 | None:intergenic | 20.0% |
!!! | GTGTTTTATAATATTTTGCT+CGG | + | chr4_1:47902745-47902764 | Msa0551760:intron | 20.0% |
!! | TTTGATAAAGAAGAATCAAT+TGG | + | chr4_1:47902932-47902951 | Msa0551760:CDS | 20.0% |
!! | TCACACATGAAAAAAATTTA+AGG | + | chr4_1:47903164-47903183 | Msa0551760:intron | 20.0% |
!! | ATAAGTTTACAAAGAAAAGT+TGG | + | chr4_1:47903441-47903460 | Msa0551760:intron | 20.0% |
!!! | TTTTTATATTAAGTTTTCGG+AGG | - | chr4_1:47903896-47903915 | None:intergenic | 20.0% |
!!! | TTACAGTAATTTGTTACTTT+AGG | - | chr4_1:47904038-47904057 | None:intergenic | 20.0% |
!! | CTTCAAAAAGTAGTTAATTT+AGG | + | chr4_1:47904154-47904173 | Msa0551760:intron | 20.0% |
!! | ATTTAAATAACTAATCACCA+AGG | + | chr4_1:47904228-47904247 | Msa0551760:intron | 20.0% |
!!! | TTTTTTGTAACCATGTTATT+GGG | - | chr4_1:47905038-47905057 | None:intergenic | 20.0% |
!! | GATGGCTTATATATTTAATT+AGG | + | chr4_1:47905862-47905881 | Msa0551760:intron | 20.0% |
!!! | GATTTGGAATTTAATTAAGT+TGG | + | chr4_1:47906056-47906075 | Msa0551760:intron | 20.0% |
!! | AAATCAGCTTAAGAATATAA+TGG | + | chr4_1:47906085-47906104 | Msa0551760:intron | 20.0% |
!! | AATTAAATCAACCAATATCA+AGG | - | chr4_1:47906150-47906169 | None:intergenic | 20.0% |
!!! | ATATTGGTTGATTTAATTTC+TGG | + | chr4_1:47906152-47906171 | Msa0551760:intron | 20.0% |
!!! | TGAGAATGTATTTTTTGTAT+AGG | + | chr4_1:47906531-47906550 | Msa0551760:intron | 20.0% |
!! | AATATTGTATCTGTTTCATT+TGG | + | chr4_1:47906860-47906879 | Msa0551760:intron | 20.0% |
!!! | AGAAAATTTAAGCATCATTT+TGG | + | chr4_1:47906928-47906947 | Msa0551760:CDS | 20.0% |
!! | GTATAGATACTTACTAAATT+AGG | - | chr4_1:47907085-47907104 | None:intergenic | 20.0% |
!!! | ATTTTAAATGATCAAATAGC+TGG | + | chr4_1:47907116-47907135 | Msa0551760:intron | 20.0% |
!! | TCAAAATTATAATTTCCATG+AGG | - | chr4_1:47907148-47907167 | None:intergenic | 20.0% |
!!! | CTAAACTTTTAACTATACTA+TGG | + | chr4_1:47907197-47907216 | Msa0551760:intron | 20.0% |
!! | CATAAAAGTTATCTATCATT+TGG | + | chr4_1:47907244-47907263 | Msa0551760:intron | 20.0% |
!! | AAACCTTCAATATATATTGT+AGG | - | chr4_1:47907324-47907343 | None:intergenic | 20.0% |
!!! | ATATATATTGAAGGTTTGTT+TGG | + | chr4_1:47907327-47907346 | Msa0551760:intron | 20.0% |
!! | ATGAATCAATTGTCAAAAAA+TGG | + | chr4_1:47907591-47907610 | Msa0551760:CDS | 20.0% |
!! | TGAATCAATTGTCAAAAAAT+GGG | + | chr4_1:47907592-47907611 | Msa0551760:CDS | 20.0% |
!! | TTTGATAAAGAAGAATCAAT+TGG | + | chr4_1:47902932-47902951 | Msa0551760:CDS | 20.0% |
!! | CTTTATTTGTTGAAACTAAC+TGG | - | chr4_1:47900500-47900519 | None:intergenic | 25.0% |
! | AGTTTCAACAAATAAAGAGA+TGG | + | chr4_1:47900503-47900522 | Msa0551760:CDS | 25.0% |
! | AATTCCTCATGAAATAGAAT+AGG | + | chr4_1:47901071-47901090 | Msa0551760:intron | 25.0% |
! | TGATATGATAACTTTGACAT+TGG | + | chr4_1:47901320-47901339 | Msa0551760:intron | 25.0% |
!!! | TTGCCCTTTAATTTTAAATG+TGG | + | chr4_1:47901688-47901707 | Msa0551760:intron | 25.0% |
!!! | TGCCCTTTAATTTTAAATGT+GGG | + | chr4_1:47901689-47901708 | Msa0551760:intron | 25.0% |
!! | TTGTAGCTTCATAATCTTTT+GGG | - | chr4_1:47901801-47901820 | None:intergenic | 25.0% |
!! | TTTGTAGCTTCATAATCTTT+TGG | - | chr4_1:47901802-47901821 | None:intergenic | 25.0% |
!! | CAATTTGAATTCTGAAAGTA+AGG | - | chr4_1:47902245-47902264 | None:intergenic | 25.0% |
! | GTCATTCAAAAAGAATTAAG+AGG | - | chr4_1:47902376-47902395 | None:intergenic | 25.0% |
! | CTTATGCATAATGCATAATA+GGG | - | chr4_1:47902519-47902538 | None:intergenic | 25.0% |
! | TCTTATGCATAATGCATAAT+AGG | - | chr4_1:47902520-47902539 | None:intergenic | 25.0% |
! | TTGAATATAACTACATGTGT+CGG | - | chr4_1:47902673-47902692 | None:intergenic | 25.0% |
!! | ATATTTTGCTCGGTTTAATT+TGG | + | chr4_1:47902755-47902774 | Msa0551760:intron | 25.0% |
! | TAAAAATGATCTGAAGACTT+TGG | - | chr4_1:47903287-47903306 | None:intergenic | 25.0% |
!!! | AAGTCTTCAGATCATTTTTA+AGG | + | chr4_1:47903287-47903306 | Msa0551760:intron | 25.0% |
! | ACCAAAACAATAAAAAGAGT+CGG | + | chr4_1:47903477-47903496 | Msa0551760:intron | 25.0% |
! | ACCTTTAATTGACAACTTAT+GGG | - | chr4_1:47903655-47903674 | None:intergenic | 25.0% |
! | AACCTTTAATTGACAACTTA+TGG | - | chr4_1:47903656-47903675 | None:intergenic | 25.0% |
! | TCATACTCACATTATATTTG+AGG | - | chr4_1:47903693-47903712 | None:intergenic | 25.0% |
!! | TTTGAAGCATATGATTATCA+AGG | + | chr4_1:47903838-47903857 | Msa0551760:intron | 25.0% |
! | ACAAACCACCTTTAAATTTA+GGG | - | chr4_1:47904015-47904034 | None:intergenic | 25.0% |
! | TTTCGTAAACACTATGATAA+TGG | - | chr4_1:47904180-47904199 | None:intergenic | 25.0% |
! | TAAATAAGATAAGATTGGGA+GGG | - | chr4_1:47904213-47904232 | None:intergenic | 25.0% |
! | TTAAATAAGATAAGATTGGG+AGG | - | chr4_1:47904214-47904233 | None:intergenic | 25.0% |
! | GGTTTCAACAAATCAAAAAA+TGG | + | chr4_1:47904264-47904283 | Msa0551760:intron | 25.0% |
! | TTAATCTCTACCAGAAAATT+TGG | - | chr4_1:47904987-47905006 | None:intergenic | 25.0% |
!! | TTTTTGTAACCATGTTATTG+GGG | - | chr4_1:47905037-47905056 | None:intergenic | 25.0% |
!!! | CTTTTTTGTAACCATGTTAT+TGG | - | chr4_1:47905039-47905058 | None:intergenic | 25.0% |
!! | TCTAAAATCTAGGATTACAA+CGG | - | chr4_1:47905085-47905104 | None:intergenic | 25.0% |
! | AGGAAGAAGATAATGAAATT+AGG | + | chr4_1:47905622-47905641 | Msa0551760:intron | 25.0% |
! | GGAAGAAGATAATGAAATTA+GGG | + | chr4_1:47905623-47905642 | Msa0551760:intron | 25.0% |
! | TACCATATATATGTATAGCA+TGG | - | chr4_1:47906022-47906041 | None:intergenic | 25.0% |
! | TAAAGAAGAGTTAGAAGATT+TGG | + | chr4_1:47906040-47906059 | Msa0551760:intron | 25.0% |
! | AAACAATTCCTCAATAAACA+AGG | + | chr4_1:47906671-47906690 | Msa0551760:CDS | 25.0% |
! | AACAATTCCTCAATAAACAA+GGG | + | chr4_1:47906672-47906691 | Msa0551760:CDS | 25.0% |
!!! | TCCATTTTTGATTCCTTATA+AGG | + | chr4_1:47906727-47906746 | Msa0551760:CDS | 25.0% |
!!! | CCATTTTTGATTCCTTATAA+GGG | + | chr4_1:47906728-47906747 | Msa0551760:CDS | 25.0% |
! | ACACCTACAATATATATTGA+AGG | + | chr4_1:47907318-47907337 | Msa0551760:intron | 25.0% |
! | ATTTGGAAAAAGTGAAATTG+AGG | + | chr4_1:47907557-47907576 | Msa0551760:CDS | 25.0% |
! | TTCACACATGAAGAAATTTA+AGG | + | chr4_1:47907854-47907873 | Msa0551760:CDS | 25.0% |
! | CTTTTACTTACACAGAATCA+AGG | + | chr4_1:47900683-47900702 | Msa0551760:intron | 30.0% |
!! | TGAAGTGTTGAGTTTATCAA+AGG | - | chr4_1:47900853-47900872 | None:intergenic | 30.0% |
CAATCCTATTCTATTTCATG+AGG | - | chr4_1:47901078-47901097 | None:intergenic | 30.0% | |
AAGCAATTCCTCAATAAACA+AGG | + | chr4_1:47901856-47901875 | Msa0551760:CDS | 30.0% | |
! | GAAAGAAAATAGGTGTTTTG+AGG | + | chr4_1:47901887-47901906 | Msa0551760:CDS | 30.0% |
CCTTTATAGGGAATCAAAAA+TGG | - | chr4_1:47901916-47901935 | None:intergenic | 30.0% | |
!! | CCATTTTTGATTCCCTATAA+AGG | + | chr4_1:47901913-47901932 | Msa0551760:CDS | 30.0% |
AGAATCAATGACCAATTGAT+GGG | - | chr4_1:47902017-47902036 | None:intergenic | 30.0% | |
ATATGCAAATCAAGACAAAG+AGG | + | chr4_1:47902142-47902161 | Msa0551760:intron | 30.0% | |
TTTGGTTGTTGATCTGTTTA+TGG | + | chr4_1:47902773-47902792 | Msa0551760:intron | 30.0% | |
AGGAAAAGACTAATGAGTAT+GGG | + | chr4_1:47902808-47902827 | Msa0551760:intron | 30.0% | |
AATTGAAGCAATGAAGATGA+TGG | + | chr4_1:47902881-47902900 | Msa0551760:intron | 30.0% | |
!! | ACCGACTCTTTTTATTGTTT+TGG | - | chr4_1:47903481-47903500 | None:intergenic | 30.0% |
AAGAAAGAATAGGTATTTGC+AGG | - | chr4_1:47903615-47903634 | None:intergenic | 30.0% | |
CCTTTAATTGACAACTTATG+GGG | - | chr4_1:47903654-47903673 | None:intergenic | 30.0% | |
CATCACAACCCTAAATTTAA+AGG | + | chr4_1:47904004-47904023 | Msa0551760:intron | 30.0% | |
GACAAACCACCTTTAAATTT+AGG | - | chr4_1:47904016-47904035 | None:intergenic | 30.0% | |
TAACATACACCTTACAAACT+AGG | + | chr4_1:47904082-47904101 | Msa0551760:intron | 30.0% | |
!!! | ACTACTTTTTGAAGTAGTGA+AGG | - | chr4_1:47904148-47904167 | None:intergenic | 30.0% |
! | CTTTTACTTACACAGAATCA+AGG | + | chr4_1:47900683-47900702 | Msa0551760:intron | 30.0% |
! | AGTAGTATTGAGTTTGTCAA+AGG | - | chr4_1:47904629-47904648 | None:intergenic | 30.0% |
! | GGAGACTTTATTTAAAGGAT+CGG | - | chr4_1:47904905-47904924 | None:intergenic | 30.0% |
GATCCTTTAAATAAAGTCTC+CGG | + | chr4_1:47904904-47904923 | Msa0551760:intron | 30.0% | |
! | AAACCGGAGACTTTATTTAA+AGG | - | chr4_1:47904910-47904929 | None:intergenic | 30.0% |
GATTAATCATCGACAAAAGT+TGG | + | chr4_1:47905001-47905020 | Msa0551760:intron | 30.0% | |
! | TTTTGTAACCATGTTATTGG+GGG | - | chr4_1:47905036-47905055 | None:intergenic | 30.0% |
!! | CTCTCTCAATTCTAAAATCT+AGG | - | chr4_1:47905095-47905114 | None:intergenic | 30.0% |
CTATGATACATGTCAAACAA+CGG | + | chr4_1:47905284-47905303 | Msa0551760:intron | 30.0% | |
GAAGATAATGAAATTAGGGT+TGG | + | chr4_1:47905627-47905646 | Msa0551760:intron | 30.0% | |
! | GTATTGGGCTTTTCTAAATT+TGG | + | chr4_1:47905687-47905706 | Msa0551760:intron | 30.0% |
GTAGCAATTCTCAATTCATT+GGG | - | chr4_1:47905717-47905736 | None:intergenic | 30.0% | |
AGTAGCAATTCTCAATTCAT+TGG | - | chr4_1:47905718-47905737 | None:intergenic | 30.0% | |
TACGTGACATTAGAAGAATT+CGG | - | chr4_1:47905941-47905960 | None:intergenic | 30.0% | |
AATTGCGAATTATGTGACTA+TGG | + | chr4_1:47905995-47906014 | Msa0551760:intron | 30.0% | |
GTCCATGCTATACATATATA+TGG | + | chr4_1:47906017-47906036 | Msa0551760:intron | 30.0% | |
TGATATGCTAACCTTGATAT+TGG | + | chr4_1:47906136-47906155 | Msa0551760:intron | 30.0% | |
AAACATGGTTACAGTTTCAT+TGG | + | chr4_1:47906255-47906274 | Msa0551760:CDS | 30.0% | |
AACATGGTTACAGTTTCATT+GGG | + | chr4_1:47906256-47906275 | Msa0551760:CDS | 30.0% | |
ATGTGCTTGATGTAATTGTT+GGG | + | chr4_1:47901770-47901789 | Msa0551760:CDS | 30.0% | |
TTGTAGCTTCATAATCTCTT+GGG | - | chr4_1:47906616-47906635 | None:intergenic | 30.0% | |
TTTGTAGCTTCATAATCTCT+TGG | - | chr4_1:47906617-47906636 | None:intergenic | 30.0% | |
AATTGTTTATAACCACTCGA+AGG | - | chr4_1:47906659-47906678 | None:intergenic | 30.0% | |
CCCTTATAAGGAATCAAAAA+TGG | - | chr4_1:47906731-47906750 | None:intergenic | 30.0% | |
TTTGGAAATTGAAGAGAAAG+AGG | + | chr4_1:47906878-47906897 | Msa0551760:intron | 30.0% | |
AATCTAGTAGTGAACTGTTA+TGG | + | chr4_1:47907464-47907483 | Msa0551760:intron | 30.0% | |
AGGAAAAGACTAAGGAATAT+GGG | + | chr4_1:47907499-47907518 | Msa0551760:intron | 30.0% | |
TTCTTGTATGTCTTCTATGG+TGG | - | chr4_1:47900622-47900641 | None:intergenic | 35.0% | |
TGCTTCTTGTATGTCTTCTA+TGG | - | chr4_1:47900625-47900644 | None:intergenic | 35.0% | |
TACTGTCCTTAAGCAAAACA+GGG | - | chr4_1:47900824-47900843 | None:intergenic | 35.0% | |
ATACTGTCCTTAAGCAAAAC+AGG | - | chr4_1:47900825-47900844 | None:intergenic | 35.0% | |
!!! | ACTAGTTTTCCCCAGAATAA+TGG | - | chr4_1:47900952-47900971 | None:intergenic | 35.0% |
TGTTATGCAGAATCCTTATG+TGG | + | chr4_1:47901405-47901424 | Msa0551760:intron | 35.0% | |
TAACATGGTTGCAGTTTCAT+TGG | + | chr4_1:47901480-47901499 | Msa0551760:CDS | 35.0% | |
AACATGGTTGCAGTTTCATT+GGG | + | chr4_1:47901481-47901500 | Msa0551760:CDS | 35.0% | |
CATGTGCTTGATGTAATTGT+TGG | + | chr4_1:47901769-47901788 | Msa0551760:CDS | 35.0% | |
AATTGCTTATAACCACCTGA+AGG | - | chr4_1:47901844-47901863 | None:intergenic | 35.0% | |
! | CATTGAGACCTTGTTTATTG+AGG | - | chr4_1:47901867-47901886 | None:intergenic | 35.0% |
CTCAATAAACAAGGTCTCAA+TGG | + | chr4_1:47901865-47901884 | Msa0551760:CDS | 35.0% | |
GGTCTCAATGGAAAGAAAAT+AGG | + | chr4_1:47901877-47901896 | Msa0551760:CDS | 35.0% | |
GTGACATTGGATCCTTTATA+GGG | - | chr4_1:47901928-47901947 | None:intergenic | 35.0% | |
AGTGACATTGGATCCTTTAT+AGG | - | chr4_1:47901929-47901948 | None:intergenic | 35.0% | |
ATTGAGATGATCCTCAAAGA+TGG | - | chr4_1:47901953-47901972 | None:intergenic | 35.0% | |
GAGAATCAATGACCAATTGA+TGG | - | chr4_1:47902018-47902037 | None:intergenic | 35.0% | |
! | AGAAAATTTAAGCACCGTTC+TGG | + | chr4_1:47902192-47902211 | Msa0551760:CDS | 35.0% |
! | TCATTTCACCACTTTGAAGA+GGG | - | chr4_1:47902219-47902238 | None:intergenic | 35.0% |
! | ATCATTTCACCACTTTGAAG+AGG | - | chr4_1:47902220-47902239 | None:intergenic | 35.0% |
TATTATTCTAGTGTCGTGTC+TGG | + | chr4_1:47902711-47902730 | Msa0551760:intron | 35.0% | |
! | GTTTATGGTTTTCTTGTGAC+AGG | + | chr4_1:47902788-47902807 | Msa0551760:intron | 35.0% |
CAGGAAAAGACTAATGAGTA+TGG | + | chr4_1:47902807-47902826 | Msa0551760:intron | 35.0% | |
!!! | GTATGGGCAGGATTTTTTTA+TGG | + | chr4_1:47902824-47902843 | Msa0551760:intron | 35.0% |
TCAGAAATGACAAGTGGAAT+TGG | + | chr4_1:47902849-47902868 | Msa0551760:intron | 35.0% | |
ATGACAAGTGGAATTGGAAA+AGG | + | chr4_1:47902855-47902874 | Msa0551760:intron | 35.0% | |
ATGGAGCAGTTGTCAAAAAA+TGG | + | chr4_1:47902900-47902919 | Msa0551760:CDS | 35.0% | |
TGGAGCAGTTGTCAAAAAAT+GGG | + | chr4_1:47902901-47902920 | Msa0551760:CDS | 35.0% | |
!! | ATGCCATTTGGAATCTGTTT+TGG | + | chr4_1:47903050-47903069 | Msa0551760:CDS | 35.0% |
!!! | CATTTGGAATCTGTTTTGGT+GGG | + | chr4_1:47903054-47903073 | Msa0551760:intron | 35.0% |
!!! | AATCTGTTTTGGTGGGTTAA+AGG | + | chr4_1:47903061-47903080 | Msa0551760:intron | 35.0% |
!!! | ATCTGTTTTGGTGGGTTAAA+GGG | + | chr4_1:47903062-47903081 | Msa0551760:intron | 35.0% |
TACAATCACCACAAAGCTAT+CGG | - | chr4_1:47903213-47903232 | None:intergenic | 35.0% | |
!! | AAGAAAAGTTGGTGTTGACA+CGG | + | chr4_1:47903452-47903471 | Msa0551760:intron | 35.0% |
CCCCATAAGTTGTCAATTAA+AGG | + | chr4_1:47903651-47903670 | Msa0551760:intron | 35.0% | |
! | TATATTAAGTTTTCGGAGGC+TGG | - | chr4_1:47903892-47903911 | None:intergenic | 35.0% |
CACAACCCTAAATTTAAAGG+TGG | + | chr4_1:47904007-47904026 | Msa0551760:intron | 35.0% | |
!!! | TGTGCTGGTTTTATTTACAG+CGG | + | chr4_1:47904312-47904331 | Msa0551760:intron | 35.0% |
TTATTTACAGCGGCATTTAG+AGG | + | chr4_1:47904322-47904341 | Msa0551760:intron | 35.0% | |
TCATCAACGCAATAGATGAA+TGG | + | chr4_1:47904350-47904369 | Msa0551760:CDS | 35.0% | |
TGCTTCTTGTATGTCTTCTA+TGG | - | chr4_1:47900625-47900644 | None:intergenic | 35.0% | |
ACAAACTCAATACTACTGCA+GGG | + | chr4_1:47904632-47904651 | Msa0551760:intron | 35.0% | |
TCAACATGTTTGCATTCAGA+AGG | - | chr4_1:47904936-47904955 | None:intergenic | 35.0% | |
ATTTGGCTGACTATCTTTAG+TGG | - | chr4_1:47904970-47904989 | None:intergenic | 35.0% | |
! | AGATAGTCAGCCAAATTTTC+TGG | + | chr4_1:47904974-47904993 | Msa0551760:intron | 35.0% |
GATACCACTGAATTGAAACA+GGG | - | chr4_1:47905142-47905161 | None:intergenic | 35.0% | |
AGATACCACTGAATTGAAAC+AGG | - | chr4_1:47905143-47905162 | None:intergenic | 35.0% | |
TTAACTACATGTGTCCTAGT+TGG | + | chr4_1:47905260-47905279 | Msa0551760:intron | 35.0% | |
ACATGTATCATAGTCCAACT+AGG | - | chr4_1:47905277-47905296 | None:intergenic | 35.0% | |
CACTGGACATTCTTTGTATT+GGG | + | chr4_1:47905672-47905691 | Msa0551760:intron | 35.0% | |
CACATAATTCGCAATTCGTT+CGG | - | chr4_1:47905991-47906010 | None:intergenic | 35.0% | |
TATTTCAGTGGCAACAAACA+TGG | + | chr4_1:47906240-47906259 | Msa0551760:CDS | 35.0% | |
ACATGGTTACAGTTTCATTG+GGG | + | chr4_1:47906257-47906276 | Msa0551760:CDS | 35.0% | |
! | TTTTGTATAGGCCAATATGC+AGG | + | chr4_1:47906543-47906562 | Msa0551760:intron | 35.0% |
CATGTGCTTGATGTAATTGT+TGG | + | chr4_1:47901769-47901788 | Msa0551760:CDS | 35.0% | |
ATTGAGATGATCCTCAAAGA+TGG | - | chr4_1:47901953-47901972 | None:intergenic | 35.0% | |
! | ATTTTGGACTCTCTACAAAG+TGG | + | chr4_1:47906944-47906963 | Msa0551760:CDS | 35.0% |
GTCTCTCAACAAATATCTAC+AGG | + | chr4_1:47907000-47907019 | Msa0551760:CDS | 35.0% | |
! | TGTTATGGTTTTCCTGTAAC+AGG | + | chr4_1:47907479-47907498 | Msa0551760:intron | 35.0% |
CAGGAAAAGACTAAGGAATA+TGG | + | chr4_1:47907498-47907517 | Msa0551760:intron | 35.0% | |
!! | ATGCCATTTGGAATCTGTTT+TGG | + | chr4_1:47903050-47903069 | Msa0551760:CDS | 35.0% |
!!! | CATTTGGAATCTGTTTTGGT+GGG | + | chr4_1:47903054-47903073 | Msa0551760:intron | 35.0% |
!!! | AATCTGTTTTGGTGGGTTAA+AGG | + | chr4_1:47903061-47903080 | Msa0551760:intron | 35.0% |
!!! | ATCTGTTTTGGTGGGTTAAA+GGG | + | chr4_1:47903062-47903081 | Msa0551760:intron | 35.0% |
GATAAACTCAACACTTCAGC+AGG | + | chr4_1:47900855-47900874 | Msa0551760:intron | 40.0% | |
AGCAGGTTCTTATGCATTGT+TGG | + | chr4_1:47900872-47900891 | Msa0551760:intron | 40.0% | |
GCAGGTTCTTATGCATTGTT+GGG | + | chr4_1:47900873-47900892 | Msa0551760:intron | 40.0% | |
TTATGCATTGTTGGGATCGA+AGG | + | chr4_1:47900881-47900900 | Msa0551760:CDS | 40.0% | |
GCATGTGGTTTCGAAGTTAA+GGG | + | chr4_1:47900917-47900936 | Msa0551760:CDS | 40.0% | |
! | GGACTTTTAGACTCCACATA+AGG | - | chr4_1:47901421-47901440 | None:intergenic | 40.0% |
CATGTTAGTTGCCACTGAAA+TGG | - | chr4_1:47901467-47901486 | None:intergenic | 40.0% | |
CATTTCAGTGGCAACTAACA+TGG | + | chr4_1:47901465-47901484 | Msa0551760:CDS | 40.0% | |
ACATGGTTGCAGTTTCATTG+GGG | + | chr4_1:47901482-47901501 | Msa0551760:CDS | 40.0% | |
CAACTGAATTGTGATCAGCT+GGG | - | chr4_1:47901534-47901553 | None:intergenic | 40.0% | |
ACAACTGAATTGTGATCAGC+TGG | - | chr4_1:47901535-47901554 | None:intergenic | 40.0% | |
GCTGATCACAATTCAGTTGT+CGG | + | chr4_1:47901535-47901554 | Msa0551760:CDS | 40.0% | |
GTATCTTGACGAGGTGAAAT+TGG | - | chr4_1:47901604-47901623 | None:intergenic | 40.0% | |
TACCTGATAGTATCTTGACG+AGG | - | chr4_1:47901613-47901632 | None:intergenic | 40.0% | |
AAAGGGCAAAACTACATCAG+AGG | - | chr4_1:47901677-47901696 | None:intergenic | 40.0% | |
! | TCTGAAACTGTCCTGCATAT+TGG | - | chr4_1:47901742-47901761 | None:intergenic | 40.0% |
GCAGCTAAGTTTATACCTTC+AGG | + | chr4_1:47901826-47901845 | Msa0551760:CDS | 40.0% | |
GCTAAGTTTATACCTTCAGG+TGG | + | chr4_1:47901829-47901848 | Msa0551760:CDS | 40.0% | |
CTCAAAGATGGAAGTGACAT+TGG | - | chr4_1:47901941-47901960 | None:intergenic | 40.0% | |
! | CAATGTCACTTCCATCTTTG+AGG | + | chr4_1:47901939-47901958 | Msa0551760:CDS | 40.0% |
AGGATCATCTCAATGTGTTG+AGG | + | chr4_1:47901959-47901978 | Msa0551760:CDS | 40.0% | |
CATAACACACACCCATCAAT+TGG | + | chr4_1:47902003-47902022 | Msa0551760:intron | 40.0% | |
!! | TGCAACAGTGGTGGATAATT+TGG | + | chr4_1:47902165-47902184 | Msa0551760:CDS | 40.0% |
GCTAAGGTATAAGCAGTTTG+AGG | - | chr4_1:47902424-47902443 | None:intergenic | 40.0% | |
AAAGACTAATGAGTATGGGC+AGG | + | chr4_1:47902812-47902831 | Msa0551760:intron | 40.0% | |
ATGGCATCAGAAATGACAAG+TGG | + | chr4_1:47902843-47902862 | Msa0551760:intron | 40.0% | |
GAATCAATTGGATGCAGTGT+TGG | + | chr4_1:47902944-47902963 | Msa0551760:CDS | 40.0% | |
CCACCAAAACAGATTCCAAA+TGG | - | chr4_1:47903056-47903075 | None:intergenic | 40.0% | |
!! | CCATTTGGAATCTGTTTTGG+TGG | + | chr4_1:47903053-47903072 | Msa0551760:intron | 40.0% |
! | ATGATTTTGAGCAAGCTACC+AGG | + | chr4_1:47903114-47903133 | Msa0551760:intron | 40.0% |
ATGTGTGAATGAAAAGCGAG+GGG | - | chr4_1:47903152-47903171 | None:intergenic | 40.0% | |
CATGTGTGAATGAAAAGCGA+GGG | - | chr4_1:47903153-47903172 | None:intergenic | 40.0% | |
TCATGTGTGAATGAAAAGCG+AGG | - | chr4_1:47903154-47903173 | None:intergenic | 40.0% | |
! | ATTGCAACCGTTGTTGTTGA+GGG | - | chr4_1:47903819-47903838 | None:intergenic | 40.0% |
! | AATTGCAACCGTTGTTGTTG+AGG | - | chr4_1:47903820-47903839 | None:intergenic | 40.0% |
ATACTGATGATCTCATCACC+GGG | - | chr4_1:47904113-47904132 | None:intergenic | 40.0% | |
GATACTGATGATCTCATCAC+CGG | - | chr4_1:47904114-47904133 | None:intergenic | 40.0% | |
AACCAGAATGAATGCTACCT+TGG | - | chr4_1:47904248-47904267 | None:intergenic | 40.0% | |
CAGCACAGAAAGAGAAACTT+TGG | - | chr4_1:47904299-47904318 | None:intergenic | 40.0% | |
CAAAGTTTCTCTTTCTGTGC+TGG | + | chr4_1:47904297-47904316 | Msa0551760:intron | 40.0% | |
TACTGTCCTTGAGCAAAACA+GGG | - | chr4_1:47904600-47904619 | None:intergenic | 40.0% | |
ATACTGTCCTTGAGCAAAAC+AGG | - | chr4_1:47904601-47904620 | None:intergenic | 40.0% | |
GACAAACTCAATACTACTGC+AGG | + | chr4_1:47904631-47904650 | Msa0551760:intron | 40.0% | |
ACACGTGGTTTCTAAACTCA+GGG | + | chr4_1:47904693-47904712 | Msa0551760:CDS | 40.0% | |
CTACTGTTATGCCGAAAACT+TGG | + | chr4_1:47904773-47904792 | Msa0551760:CDS | 40.0% | |
! | GATCGGAATCTAGTTCAACT+TGG | - | chr4_1:47904888-47904907 | None:intergenic | 40.0% |
TGCATTCAGAAGGTTCAAAC+CGG | - | chr4_1:47904926-47904945 | None:intergenic | 40.0% | |
TTCTCCCTGTTTCAATTCAG+TGG | + | chr4_1:47905135-47905154 | Msa0551760:intron | 40.0% | |
CGAATTATGTGACTATGGCA+TGG | - | chr4_1:47905340-47905359 | None:intergenic | 40.0% | |
AGCAGCGAATTATGTGACTA+TGG | - | chr4_1:47905345-47905364 | None:intergenic | 40.0% | |
AGAAAGTCAGTTGAAGAGAC+TGG | + | chr4_1:47905566-47905585 | Msa0551760:intron | 40.0% | |
GAAAGTCAGTTGAAGAGACT+GGG | + | chr4_1:47905567-47905586 | Msa0551760:intron | 40.0% | |
!! | TGAAATTAGGGTTGGTGTGT+TGG | + | chr4_1:47905635-47905654 | Msa0551760:intron | 40.0% |
GCACTGGACATTCTTTGTAT+TGG | + | chr4_1:47905671-47905690 | Msa0551760:intron | 40.0% | |
! | TGGGCTTTTCTAAATTTGGC+TGG | + | chr4_1:47905691-47905710 | Msa0551760:intron | 40.0% |
AGAAGAATTCGGTACGTGTA+GGG | - | chr4_1:47905930-47905949 | None:intergenic | 40.0% | |
TAGAAGAATTCGGTACGTGT+AGG | - | chr4_1:47905931-47905950 | None:intergenic | 40.0% | |
TGTCATGCAGAATCCTTATG+TGG | + | chr4_1:47906180-47906199 | Msa0551760:intron | 40.0% | |
! | GGACTTTTAGACTCCACATA+AGG | - | chr4_1:47901421-47901440 | None:intergenic | 40.0% |
TGGAGTCTAAAAGTCCATGT+GGG | + | chr4_1:47906200-47906219 | Msa0551760:CDS | 40.0% | |
!! | CTTTGGATCTGCTATTTCAG+TGG | + | chr4_1:47906228-47906247 | Msa0551760:CDS | 40.0% |
ACTACTGAGTTATGATCAGC+TGG | - | chr4_1:47906310-47906329 | None:intergenic | 40.0% | |
AGCTGATCATAACTCAGTAG+TGG | + | chr4_1:47906309-47906328 | Msa0551760:CDS | 40.0% | |
GCTGATCATAACTCAGTAGT+GGG | + | chr4_1:47906310-47906329 | Msa0551760:CDS | 40.0% | |
CTGATCATAACTCAGTAGTG+GGG | + | chr4_1:47906311-47906330 | Msa0551760:CDS | 40.0% | |
GTATCTTGACGAGGTGAAAT+CGG | - | chr4_1:47901604-47901623 | None:intergenic | 40.0% | |
TCACCTCGTCAAGATACTAT+TGG | + | chr4_1:47901607-47901626 | Msa0551760:CDS | 40.0% | |
CACCTCGTCAAGATACTATT+GGG | + | chr4_1:47906383-47906402 | Msa0551760:intron | 40.0% | |
! | TCTGAAACTGTCCTGCATAT+TGG | - | chr4_1:47901742-47901761 | None:intergenic | 40.0% |
! | CTTTGAGCCCTTGTTTATTG+AGG | - | chr4_1:47906682-47906701 | None:intergenic | 40.0% |
GGGCTCAAAGCAAAGAAAAT+AGG | + | chr4_1:47906692-47906711 | Msa0551760:CDS | 40.0% | |
GTGACATTGGATCCCTTATA+AGG | - | chr4_1:47906743-47906762 | None:intergenic | 40.0% | |
CTCAAAGATGGAAGTGACAT+TGG | - | chr4_1:47901941-47901960 | None:intergenic | 40.0% | |
! | CAATGTCACTTCCATCTTTG+AGG | + | chr4_1:47901939-47901958 | Msa0551760:CDS | 40.0% |
AGGATCATCTCAATCTGTTG+AGG | + | chr4_1:47906774-47906793 | Msa0551760:CDS | 40.0% | |
!! | TGCAACAGTGGTGGATAATT+TGG | + | chr4_1:47902165-47902184 | Msa0551760:CDS | 40.0% |
AATAGCTGGTGAAAACCTCA+TGG | + | chr4_1:47907130-47907149 | Msa0551760:intron | 40.0% | |
! | TGCTTGACACGTATTTTGCT+CGG | + | chr4_1:47907430-47907449 | Msa0551760:intron | 40.0% |
!! | CCTTAGTCTTTTCCTGTTAC+AGG | - | chr4_1:47907494-47907513 | None:intergenic | 40.0% |
CCTGTAACAGGAAAAGACTA+AGG | + | chr4_1:47907491-47907510 | Msa0551760:intron | 40.0% | |
ATTGCTTCAGAAATGACCAG+CGG | + | chr4_1:47907534-47907553 | Msa0551760:CDS | 40.0% | |
!!! | TTCACTTTTTCCAAATCCGC+TGG | - | chr4_1:47907553-47907572 | None:intergenic | 40.0% |
GAATCAATTGGATGCAGTGT+TGG | + | chr4_1:47902944-47902963 | Msa0551760:CDS | 40.0% | |
CCACCAAAACAGATTCCAAA+TGG | - | chr4_1:47903056-47903075 | None:intergenic | 40.0% | |
!! | CCATTTGGAATCTGTTTTGG+TGG | + | chr4_1:47903053-47903072 | Msa0551760:intron | 40.0% |
! | ATGATTTTGAGCAAGCTACC+AGG | + | chr4_1:47903114-47903133 | Msa0551760:intron | 40.0% |
! | TGATTTTGAGCAAGCTACCA+GGG | + | chr4_1:47903115-47903134 | Msa0551760:intron | 40.0% |
ATGTGTGAATGAAAAGCGAG+GGG | - | chr4_1:47903152-47903171 | None:intergenic | 40.0% | |
CATGTGTGAATGAAAAGCGA+GGG | - | chr4_1:47903153-47903172 | None:intergenic | 40.0% | |
TCATGTGTGAATGAAAAGCG+AGG | - | chr4_1:47903154-47903173 | None:intergenic | 40.0% | |
GAAATCCATCAGTCAAGTCT+AGG | - | chr4_1:47907892-47907911 | None:intergenic | 40.0% | |
!! | AGACTTGACTGATGGATTTC+TGG | + | chr4_1:47907892-47907911 | Msa0551760:exon | 40.0% |
!! | TGATGGATTTCTGGTGATTG+TGG | + | chr4_1:47907901-47907920 | Msa0551760:three_prime_UTR | 40.0% |
!! | CAGCAGCAAGTATTGGATTC+AGG | - | chr4_1:47900710-47900729 | None:intergenic | 45.0% |
! | TCCAATACTTGCTGCTGTGT+TGG | + | chr4_1:47900713-47900732 | Msa0551760:CDS | 45.0% |
TCCAACACAGCAGCAAGTAT+TGG | - | chr4_1:47900717-47900736 | None:intergenic | 45.0% | |
! | TGGGATCCCTGTTTTGCTTA+AGG | + | chr4_1:47900815-47900834 | Msa0551760:CDS | 45.0% |
CGCATGTGGTTTCGAAGTTA+AGG | + | chr4_1:47900916-47900935 | Msa0551760:CDS | 45.0% | |
GTTTCGAAGTTAAGGGAAGC+CGG | + | chr4_1:47900924-47900943 | Msa0551760:CDS | 45.0% | |
TTTCCCCAGAATAATGGCAC+CGG | - | chr4_1:47900946-47900965 | None:intergenic | 45.0% | |
! | TCTGGGGAAAACTAGTCTCT+CGG | + | chr4_1:47900956-47900975 | Msa0551760:CDS | 45.0% |
AACCAATGCAAATCCACCTC+TGG | - | chr4_1:47901027-47901046 | None:intergenic | 45.0% | |
GTGGAGTCTAAAAGTCCTTG+CGG | + | chr4_1:47901424-47901443 | Msa0551760:CDS | 45.0% | |
TGGAGTCTAAAAGTCCTTGC+GGG | + | chr4_1:47901425-47901444 | Msa0551760:CDS | 45.0% | |
CTTTGGATCAGCCATTTCAG+TGG | + | chr4_1:47901453-47901472 | Msa0551760:CDS | 45.0% | |
TCATTGGGGACAGAAACTGA+TGG | + | chr4_1:47901496-47901515 | Msa0551760:CDS | 45.0% | |
CACCTCGTCAAGATACTATC+AGG | + | chr4_1:47901608-47901627 | Msa0551760:CDS | 45.0% | |
! | TTTTGCACAGGCCAATATGC+AGG | + | chr4_1:47901728-47901747 | Msa0551760:intron | 45.0% |
! | AAGACAAAGAGGTGCAACAG+TGG | + | chr4_1:47902153-47902172 | Msa0551760:intron | 45.0% |
! | ACTTTGAAGAGGGTCCAGAA+CGG | - | chr4_1:47902209-47902228 | None:intergenic | 45.0% |
ATCTCAGCTAGAGACTTCAC+AGG | - | chr4_1:47902304-47902323 | None:intergenic | 45.0% | |
! | TAACTACATGTGTCGGTGTC+AGG | - | chr4_1:47902666-47902685 | None:intergenic | 45.0% |
CTCTGATGCTTCTCCAATGT+TGG | + | chr4_1:47902974-47902993 | Msa0551760:CDS | 45.0% | |
GCTTCTCCAATGTTGGCAAT+TGG | + | chr4_1:47902981-47903000 | Msa0551760:CDS | 45.0% | |
TCTCCAATGTTGGCAATTGG+AGG | + | chr4_1:47902984-47903003 | Msa0551760:CDS | 45.0% | |
CTCCAATGTTGGCAATTGGA+GGG | + | chr4_1:47902985-47903004 | Msa0551760:CDS | 45.0% | |
TACCCTCCAATTGCCAACAT+TGG | - | chr4_1:47902990-47903009 | None:intergenic | 45.0% | |
CTTCGCTATCATATCCAGCT+GGG | - | chr4_1:47903028-47903047 | None:intergenic | 45.0% | |
GATAGCGAAGGAATGCCATT+TGG | + | chr4_1:47903038-47903057 | Msa0551760:CDS | 45.0% | |
CAAAGCTATCGGTCAAGTCT+AGG | - | chr4_1:47903202-47903221 | None:intergenic | 45.0% | |
! | AGACTTGACCGATAGCTTTG+TGG | + | chr4_1:47903202-47903221 | Msa0551760:intron | 45.0% |
TGTCACACCCTCAACAACAA+CGG | + | chr4_1:47903809-47903828 | Msa0551760:intron | 45.0% | |
GACACGTGTCTTGATTATGG+TGG | - | chr4_1:47903870-47903889 | None:intergenic | 45.0% | |
CTGGACACGTGTCTTGATTA+TGG | - | chr4_1:47903873-47903892 | None:intergenic | 45.0% | |
TACTGATGATCTCATCACCG+GGG | - | chr4_1:47904112-47904131 | None:intergenic | 45.0% | |
GAAGTAGTGAAGGTGAGACA+GGG | - | chr4_1:47904138-47904157 | None:intergenic | 45.0% | |
TGAAGTAGTGAAGGTGAGAC+AGG | - | chr4_1:47904139-47904158 | None:intergenic | 45.0% | |
CACCAAGGTAGCATTCATTC+TGG | + | chr4_1:47904243-47904262 | Msa0551760:intron | 45.0% | |
!! | CAGCAGCAAGTATTGGATTC+AGG | - | chr4_1:47900710-47900729 | None:intergenic | 45.0% |
! | TCCAATACTTGCTGCTGTGT+TGG | + | chr4_1:47900713-47900732 | Msa0551760:CDS | 45.0% |
TCCAACACAGCAGCAAGTAT+TGG | - | chr4_1:47900717-47900736 | None:intergenic | 45.0% | |
ATTGCGAGAGACGAGAAGAT+CGG | + | chr4_1:47904551-47904570 | Msa0551760:CDS | 45.0% | |
GGATTCCATGAAGCAACGAA+CGG | - | chr4_1:47904579-47904598 | None:intergenic | 45.0% | |
! | TGGAATCCCTGTTTTGCTCA+AGG | + | chr4_1:47904591-47904610 | Msa0551760:intron | 45.0% |
CACACGTGGTTTCTAAACTC+AGG | + | chr4_1:47904692-47904711 | Msa0551760:CDS | 45.0% | |
GACGCTGGTGCAATTATTCT+GGG | + | chr4_1:47904715-47904734 | Msa0551760:CDS | 45.0% | |
ACGCTGGTGCAATTATTCTG+GGG | + | chr4_1:47904716-47904735 | Msa0551760:CDS | 45.0% | |
AGAACGAAACCCATACCACT+CGG | - | chr4_1:47904755-47904774 | None:intergenic | 45.0% | |
ACCAAGGCAAATCCACTTCT+GGG | - | chr4_1:47904802-47904821 | None:intergenic | 45.0% | |
AACCAAGGCAAATCCACTTC+TGG | - | chr4_1:47904803-47904822 | None:intergenic | 45.0% | |
GTGATGAGCACTACTAACCA+AGG | - | chr4_1:47904818-47904837 | None:intergenic | 45.0% | |
TCACAGTTCCCCCAATAACA+TGG | + | chr4_1:47905025-47905044 | Msa0551760:intron | 45.0% | |
CACATAATTCGCTGCTTGAG+TGG | + | chr4_1:47905349-47905368 | Msa0551760:intron | 45.0% | |
!! | ATTAGGGTTGGTGTGTTGGA+TGG | + | chr4_1:47905639-47905658 | Msa0551760:intron | 45.0% |
!! | TTAGGGTTGGTGTGTTGGAT+GGG | + | chr4_1:47905640-47905659 | Msa0551760:intron | 45.0% |
TATAGAGCTTCGGTACGCTT+CGG | - | chr4_1:47905906-47905925 | None:intergenic | 45.0% | |
GAAGAATTCGGTACGTGTAG+GGG | - | chr4_1:47905929-47905948 | None:intergenic | 45.0% | |
GTGGAGTCTAAAAGTCCATG+TGG | + | chr4_1:47906199-47906218 | Msa0551760:CDS | 45.0% | |
TCATTGGGGACAGAAACTGA+TGG | + | chr4_1:47901496-47901515 | Msa0551760:CDS | 45.0% | |
GACCCAATAGTATCTTGACG+AGG | - | chr4_1:47906388-47906407 | None:intergenic | 45.0% | |
GCTAAGTTCATACCTTCGAG+TGG | + | chr4_1:47906644-47906663 | Msa0551760:intron | 45.0% | |
! | AAGAGAAAGAGGTGCAACAG+TGG | + | chr4_1:47906889-47906908 | Msa0551760:intron | 45.0% |
AGCTCATTTATTCTCCCGTG+AGG | + | chr4_1:47907023-47907042 | Msa0551760:CDS | 45.0% | |
AATCTCAGCTAGAGACCTCA+CGG | - | chr4_1:47907041-47907060 | None:intergenic | 45.0% | |
! | TCAGAAATGACCAGCGGATT+TGG | + | chr4_1:47907540-47907559 | Msa0551760:CDS | 45.0% |
CTCTGATGCTTCTCCAATGT+TGG | + | chr4_1:47902974-47902993 | Msa0551760:CDS | 45.0% | |
GCTTCTCCAATGTTGGCAAT+TGG | + | chr4_1:47902981-47903000 | Msa0551760:CDS | 45.0% | |
TCTCCAATGTTGGCAATTGG+AGG | + | chr4_1:47902984-47903003 | Msa0551760:CDS | 45.0% | |
CTCCAATGTTGGCAATTGGA+GGG | + | chr4_1:47902985-47903004 | Msa0551760:CDS | 45.0% | |
TACCCTCCAATTGCCAACAT+TGG | - | chr4_1:47902990-47903009 | None:intergenic | 45.0% | |
CTTCGCTATCATATCCAGCT+GGG | - | chr4_1:47903028-47903047 | None:intergenic | 45.0% | |
GATAGCGAAGGAATGCCATT+TGG | + | chr4_1:47903038-47903057 | Msa0551760:CDS | 45.0% | |
TAGGACCTAGACTTGACTGA+TGG | + | chr4_1:47907884-47907903 | Msa0551760:exon | 45.0% | |
!! | TAAAAAATAATTTCTTAATT+TGG | - | chr4_1:47903316-47903335 | None:intergenic | 5.0% |
!!! | AATTAAGAAATTATTTTTTA+AGG | + | chr4_1:47903316-47903335 | Msa0551760:intron | 5.0% |
!!! | AATTTTTTATATTAAGTTTT+CGG | - | chr4_1:47903899-47903918 | None:intergenic | 5.0% |
GTGACCGTTCGTTGCTTCAT+GGG | + | chr4_1:47900796-47900815 | Msa0551760:CDS | 50.0% | |
GGATCCCATGAAGCAACGAA+CGG | - | chr4_1:47900803-47900822 | None:intergenic | 50.0% | |
!! | GAAGCCGGTGCCATTATTCT+GGG | + | chr4_1:47900939-47900958 | Msa0551760:CDS | 50.0% |
!! | AAGCCGGTGCCATTATTCTG+GGG | + | chr4_1:47900940-47900959 | Msa0551760:CDS | 50.0% |
! | GGAAAACTAGTCTCTCGGAG+TGG | + | chr4_1:47900961-47900980 | Msa0551760:CDS | 50.0% |
! | ACTAGTCTCTCGGAGTGGTA+TGG | + | chr4_1:47900966-47900985 | Msa0551760:CDS | 50.0% |
CTAGTCTCTCGGAGTGGTAT+GGG | + | chr4_1:47900967-47900986 | Msa0551760:CDS | 50.0% | |
TAGTCTCTCGGAGTGGTATG+GGG | + | chr4_1:47900968-47900987 | Msa0551760:CDS | 50.0% | |
CTAACACTGTGCCAGAAGCT+TGG | + | chr4_1:47900997-47901016 | Msa0551760:CDS | 50.0% | |
CTACTAGTGAGTCCAACGGT+GGG | - | chr4_1:47901568-47901587 | None:intergenic | 50.0% | |
CACCGTTGGACTCACTAGTA+GGG | + | chr4_1:47901567-47901586 | Msa0551760:CDS | 50.0% | |
AGCCCTACTAGTGAGTCCAA+CGG | - | chr4_1:47901572-47901591 | None:intergenic | 50.0% | |
! | ACAAAGAGGTGCAACAGTGG+TGG | + | chr4_1:47902156-47902175 | Msa0551760:CDS | 50.0% |
! | GTTCTGGACCCTCTTCAAAG+TGG | + | chr4_1:47902208-47902227 | Msa0551760:CDS | 50.0% |
!! | TTGGATGCAGTGTTGGCCAT+AGG | + | chr4_1:47902951-47902970 | Msa0551760:CDS | 50.0% |
!! | TGGAGAAGCATCAGAGCCTA+TGG | - | chr4_1:47902970-47902989 | None:intergenic | 50.0% |
CCTTCGCTATCATATCCAGC+TGG | - | chr4_1:47903029-47903048 | None:intergenic | 50.0% | |
! | CCAGCTGGATATGATAGCGA+AGG | + | chr4_1:47903026-47903045 | Msa0551760:CDS | 50.0% |
TTGAGCAAGCTACCAGGACA+AGG | + | chr4_1:47903120-47903139 | Msa0551760:intron | 50.0% | |
TGTGAATGAAAAGCGAGGGG+TGG | - | chr4_1:47903149-47903168 | None:intergenic | 50.0% | |
CTTACAAACTAGGCCAACCC+CGG | + | chr4_1:47904092-47904111 | Msa0551760:intron | 50.0% | |
TTGCGAGAGACGAGAAGATC+GGG | + | chr4_1:47904552-47904571 | Msa0551760:CDS | 50.0% | |
TGCAGGGTCGTATGCATTGT+TGG | + | chr4_1:47904648-47904667 | Msa0551760:intron | 50.0% | |
GCAGGGTCGTATGCATTGTT+GGG | + | chr4_1:47904649-47904668 | Msa0551760:intron | 50.0% | |
CAGGGTCGTATGCATTGTTG+GGG | + | chr4_1:47904650-47904669 | Msa0551760:intron | 50.0% | |
GTATGCATTGTTGGGGTCCA+AGG | + | chr4_1:47904657-47904676 | Msa0551760:CDS | 50.0% | |
GTTTCTAAACTCAGGGACGC+TGG | + | chr4_1:47904700-47904719 | Msa0551760:CDS | 50.0% | |
GGACGCTGGTGCAATTATTC+TGG | + | chr4_1:47904714-47904733 | Msa0551760:CDS | 50.0% | |
AACGAAACCCATACCACTCG+GGG | - | chr4_1:47904753-47904772 | None:intergenic | 50.0% | |
GAACGAAACCCATACCACTC+GGG | - | chr4_1:47904754-47904773 | None:intergenic | 50.0% | |
!!! | CTTCTGGGGCACCAAGTTTT+CGG | - | chr4_1:47904787-47904806 | None:intergenic | 50.0% |
!! | AAAACTTGGTGCCCCAGAAG+TGG | + | chr4_1:47904787-47904806 | Msa0551760:CDS | 50.0% |
CCAAGGCAAATCCACTTCTG+GGG | - | chr4_1:47904801-47904820 | None:intergenic | 50.0% | |
TACGCGAAAGAACCGCGAAT+CGG | - | chr4_1:47905400-47905419 | None:intergenic | 50.0% | |
TTCGCGGTTCTTTCGCGTAT+TGG | + | chr4_1:47905401-47905420 | Msa0551760:intron | 50.0% | |
CTCGCGTTCTTCTCACTTTC+AGG | - | chr4_1:47905539-47905558 | None:intergenic | 50.0% | |
TCAGTTGAAGAGACTGGGAC+TGG | + | chr4_1:47905572-47905591 | Msa0551760:intron | 50.0% | |
TGCTGCTGTATGGAGGAATG+AGG | + | chr4_1:47905602-47905621 | Msa0551760:intron | 50.0% | |
! | CGTGTAGGGGTATAGAGCTT+CGG | - | chr4_1:47905916-47905935 | None:intergenic | 50.0% |
TTCGCAATTCGTTCGGTACG+CGG | - | chr4_1:47905984-47906003 | None:intergenic | 50.0% | |
! | AGTCCATGTGGGTCTAGCTT+TGG | + | chr4_1:47906211-47906230 | Msa0551760:CDS | 50.0% |
GATCCAAAGCTAGACCCACA+TGG | - | chr4_1:47906217-47906236 | None:intergenic | 50.0% | |
CTGCTAGTGAGTCCAACAGT+GGG | - | chr4_1:47906343-47906362 | None:intergenic | 50.0% | |
CACTGTTGGACTCACTAGCA+GGG | + | chr4_1:47906342-47906361 | Msa0551760:intron | 50.0% | |
! | AGAAAGAGGTGCAACAGTGG+TGG | + | chr4_1:47906892-47906911 | Msa0551760:CDS | 50.0% |
ATCTCAGCTAGAGACCTCAC+GGG | - | chr4_1:47907040-47907059 | None:intergenic | 50.0% | |
ACTGTCGCAGTCAAGGACAT+AGG | - | chr4_1:47907411-47907430 | None:intergenic | 50.0% | |
!! | TTGGATGCAGTGTTGGCCAT+AGG | + | chr4_1:47902951-47902970 | Msa0551760:CDS | 50.0% |
!! | TGGAGAAGCATCAGAGCCTA+TGG | - | chr4_1:47902970-47902989 | None:intergenic | 50.0% |
CCTTCGCTATCATATCCAGC+TGG | - | chr4_1:47903029-47903048 | None:intergenic | 50.0% | |
! | CCAGCTGGATATGATAGCGA+AGG | + | chr4_1:47903026-47903045 | Msa0551760:CDS | 50.0% |
TGTGAATGAAAAGCGAGGGG+TGG | - | chr4_1:47903149-47903168 | None:intergenic | 50.0% | |
TCTGCTTGATCTCGAGCGTC+AGG | - | chr4_1:47900747-47900766 | None:intergenic | 55.0% | |
CGCTCGAGATCAAGCAGACA+AGG | + | chr4_1:47900749-47900768 | Msa0551760:CDS | 55.0% | |
CGTGACCGTTCGTTGCTTCA+TGG | + | chr4_1:47900795-47900814 | Msa0551760:CDS | 55.0% | |
!! | GGAAGCCGGTGCCATTATTC+TGG | + | chr4_1:47900938-47900957 | Msa0551760:CDS | 55.0% |
! | CGCCAGAGGTGGATTTGCAT+TGG | + | chr4_1:47901022-47901041 | Msa0551760:CDS | 55.0% |
! | AGTCCTTGCGGGTCTAGCTT+TGG | + | chr4_1:47901436-47901455 | Msa0551760:CDS | 55.0% |
GATCCAAAGCTAGACCCGCA+AGG | - | chr4_1:47901442-47901461 | None:intergenic | 55.0% | |
CCTACTAGTGAGTCCAACGG+TGG | - | chr4_1:47901569-47901588 | None:intergenic | 55.0% | |
CCACCGTTGGACTCACTAGT+AGG | + | chr4_1:47901566-47901585 | Msa0551760:CDS | 55.0% | |
GTTGGACTCACTAGTAGGGC+TGG | + | chr4_1:47901571-47901590 | Msa0551760:CDS | 55.0% | |
CCAGCTGGGACAGTAATTGC+AGG | - | chr4_1:47903014-47903033 | None:intergenic | 55.0% | |
CCTGCAATTACTGTCCCAGC+TGG | + | chr4_1:47903011-47903030 | Msa0551760:CDS | 55.0% | |
!! | CGGGGTTGGCCTAGTTTGTA+AGG | - | chr4_1:47904094-47904113 | None:intergenic | 55.0% |
GATGATCTCATCACCGGGGT+TGG | - | chr4_1:47904108-47904127 | None:intergenic | 55.0% | |
ACCTGACGCACGAGATCAAG+CGG | + | chr4_1:47904519-47904538 | Msa0551760:CDS | 55.0% | |
GAAACCACGTGTGCATCACG+CGG | - | chr4_1:47904685-47904704 | None:intergenic | 55.0% | |
CTAGTCTCCCCGAGTGGTAT+GGG | + | chr4_1:47904743-47904762 | Msa0551760:CDS | 55.0% | |
! | CCCCAGAAGTGGATTTGCCT+TGG | + | chr4_1:47904798-47904817 | Msa0551760:CDS | 55.0% |
TTGAGTGGCGAACCGCGAAT+TGG | + | chr4_1:47905364-47905383 | Msa0551760:intron | 55.0% | |
! | GAAGAGACTGGGACTGGTAG+CGG | + | chr4_1:47905578-47905597 | Msa0551760:intron | 55.0% |
GTGGGGATCAAACCCACTGT+TGG | + | chr4_1:47906328-47906347 | Msa0551760:intron | 55.0% | |
CCTGCTAGTGAGTCCAACAG+TGG | - | chr4_1:47906344-47906363 | None:intergenic | 55.0% | |
CCACTGTTGGACTCACTAGC+AGG | + | chr4_1:47906341-47906360 | Msa0551760:intron | 55.0% | |
! | GTCAAGCACTGTCGCAGTCA+AGG | - | chr4_1:47907418-47907437 | None:intergenic | 55.0% |
TTGAGCAAGCTACCAGGGCA+AGG | + | chr4_1:47907811-47907830 | Msa0551760:CDS | 55.0% | |
GAAACCACATGCGCGTCACG+TGG | - | chr4_1:47900909-47900928 | None:intergenic | 60.0% | |
GTCGGAATCAAGCCCACCGT+TGG | + | chr4_1:47901553-47901572 | Msa0551760:CDS | 60.0% | |
TCCGCTTGATCTCGTGCGTC+AGG | - | chr4_1:47904523-47904542 | None:intergenic | 60.0% | |
CGCACGAGATCAAGCGGACA+AGG | + | chr4_1:47904525-47904544 | Msa0551760:CDS | 60.0% | |
CGGGACCGTTCGTTGCTTCA+TGG | + | chr4_1:47904571-47904590 | Msa0551760:intron | 60.0% | |
GTGTGCATCACGCGGAACCT+TGG | - | chr4_1:47904677-47904696 | None:intergenic | 60.0% | |
! | GGAAAGCTAGTCTCCCCGAG+TGG | + | chr4_1:47904737-47904756 | Msa0551760:CDS | 60.0% |
! | GCTAGTCTCCCCGAGTGGTA+TGG | + | chr4_1:47904742-47904761 | Msa0551760:CDS | 60.0% |
GGTTCGCGCGTACCAATTCG+CGG | - | chr4_1:47905379-47905398 | None:intergenic | 60.0% | |
!! | TGGTAGCGGCTGCTGCTGTA+TGG | + | chr4_1:47905592-47905611 | Msa0551760:intron | 60.0% |
TAGCGGCTGCTGCTGTATGG+AGG | + | chr4_1:47905595-47905614 | Msa0551760:intron | 60.0% | |
! | TGGATGGGCTCTTGCTGCAC+TGG | + | chr4_1:47905655-47905674 | Msa0551760:intron | 60.0% |
TTCGTTCGGTACGCGGTACG+CGG | - | chr4_1:47905977-47905996 | None:intergenic | 60.0% | |
GTTGGACTCACTAGCAGGGC+TGG | + | chr4_1:47906346-47906365 | Msa0551760:intron | 60.0% | |
CCAGCTGGGACAGTGATTGC+AGG | - | chr4_1:47907705-47907724 | None:intergenic | 60.0% | |
CCTGCAATCACTGTCCCAGC+TGG | + | chr4_1:47907702-47907721 | Msa0551760:CDS | 60.0% | |
GGTTCCACGTGACGCGCATG+TGG | + | chr4_1:47900902-47900921 | Msa0551760:CDS | 65.0% | |
CCTCTGGCGCACCAAGCTTC+TGG | - | chr4_1:47901011-47901030 | None:intergenic | 65.0% | |
!! | CCAGAAGCTTGGTGCGCCAG+AGG | + | chr4_1:47901008-47901027 | Msa0551760:CDS | 65.0% |
!! | GAAGCTTGGTGCGCCAGAGG+TGG | + | chr4_1:47901011-47901030 | Msa0551760:CDS | 65.0% |
GAGGGGTGGCTTCCTTGTCC+TGG | - | chr4_1:47903135-47903154 | None:intergenic | 65.0% | |
GGTTCCGCGTGATGCACACG+TGG | + | chr4_1:47904678-47904697 | Msa0551760:CDS | 65.0% | |
!! | GGTACGCGCGAACCGATTCG+CGG | + | chr4_1:47905385-47905404 | Msa0551760:intron | 65.0% |
TCGGTACGCGGTACGCGGTA+CGG | - | chr4_1:47905972-47905991 | None:intergenic | 65.0% | |
CGGTACGCGGTACGGGTTCG+CGG | - | chr4_1:47905964-47905983 | None:intergenic | 70.0% | |
CGGTACGCGGTACGCGGTAC+GGG | - | chr4_1:47905971-47905990 | None:intergenic | 70.0% | |
GAGGGGTGGCTTCCTTGCCC+TGG | - | chr4_1:47907826-47907845 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_1 | gene | 47900486 | 47907968 | 47900486 | ID=Msa0551760;Name=Msa0551760 |
chr4_1 | mRNA | 47900486 | 47907968 | 47900486 | ID=Msa0551760-mRNA-1;Parent=Msa0551760;Name=Msa0551760-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0.46|0.28|1|0.23|0.28|14|75|869 |
chr4_1 | exon | 47900486 | 47900677 | 47900486 | ID=Msa0551760-mRNA-1:exon:13059;Parent=Msa0551760-mRNA-1 |
chr4_1 | exon | 47900705 | 47900840 | 47900705 | ID=Msa0551760-mRNA-1:exon:13060;Parent=Msa0551760-mRNA-1 |
chr4_1 | exon | 47900877 | 47901043 | 47900877 | ID=Msa0551760-mRNA-1:exon:13061;Parent=Msa0551760-mRNA-1 |
chr4_1 | exon | 47901415 | 47901629 | 47901415 | ID=Msa0551760-mRNA-1:exon:13062;Parent=Msa0551760-mRNA-1 |
chr4_1 | exon | 47901738 | 47901980 | 47901738 | ID=Msa0551760-mRNA-1:exon:13063;Parent=Msa0551760-mRNA-1 |
chr4_1 | exon | 47902156 | 47902354 | 47902156 | ID=Msa0551760-mRNA-1:exon:13064;Parent=Msa0551760-mRNA-1 |
chr4_1 | exon | 47902897 | 47903071 | 47902897 | ID=Msa0551760-mRNA-1:exon:13065;Parent=Msa0551760-mRNA-1 |
chr4_1 | exon | 47904332 | 47904577 | 47904332 | ID=Msa0551760-mRNA-1:exon:13066;Parent=Msa0551760-mRNA-1 |
chr4_1 | exon | 47904653 | 47904819 | 47904653 | ID=Msa0551760-mRNA-1:exon:13067;Parent=Msa0551760-mRNA-1 |
chr4_1 | exon | 47906190 | 47906345 | 47906190 | ID=Msa0551760-mRNA-1:exon:13068;Parent=Msa0551760-mRNA-1 |
chr4_1 | exon | 47906650 | 47906795 | 47906650 | ID=Msa0551760-mRNA-1:exon:13069;Parent=Msa0551760-mRNA-1 |
chr4_1 | exon | 47906892 | 47906965 | 47906892 | ID=Msa0551760-mRNA-1:exon:13070;Parent=Msa0551760-mRNA-1 |
chr4_1 | exon | 47906990 | 47907090 | 47906990 | ID=Msa0551760-mRNA-1:exon:13071;Parent=Msa0551760-mRNA-1 |
chr4_1 | exon | 47907501 | 47907968 | 47907501 | ID=Msa0551760-mRNA-1:exon:13072;Parent=Msa0551760-mRNA-1 |
chr4_1 | CDS | 47900486 | 47900677 | 47900486 | ID=Msa0551760-mRNA-1:cds;Parent=Msa0551760-mRNA-1 |
chr4_1 | CDS | 47900705 | 47900840 | 47900705 | ID=Msa0551760-mRNA-1:cds;Parent=Msa0551760-mRNA-1 |
chr4_1 | CDS | 47900877 | 47901043 | 47900877 | ID=Msa0551760-mRNA-1:cds;Parent=Msa0551760-mRNA-1 |
chr4_1 | CDS | 47901415 | 47901629 | 47901415 | ID=Msa0551760-mRNA-1:cds;Parent=Msa0551760-mRNA-1 |
chr4_1 | CDS | 47901738 | 47901980 | 47901738 | ID=Msa0551760-mRNA-1:cds;Parent=Msa0551760-mRNA-1 |
chr4_1 | CDS | 47902156 | 47902354 | 47902156 | ID=Msa0551760-mRNA-1:cds;Parent=Msa0551760-mRNA-1 |
chr4_1 | CDS | 47902897 | 47903071 | 47902897 | ID=Msa0551760-mRNA-1:cds;Parent=Msa0551760-mRNA-1 |
chr4_1 | CDS | 47904332 | 47904577 | 47904332 | ID=Msa0551760-mRNA-1:cds;Parent=Msa0551760-mRNA-1 |
chr4_1 | CDS | 47904653 | 47904819 | 47904653 | ID=Msa0551760-mRNA-1:cds;Parent=Msa0551760-mRNA-1 |
chr4_1 | CDS | 47906190 | 47906345 | 47906190 | ID=Msa0551760-mRNA-1:cds;Parent=Msa0551760-mRNA-1 |
chr4_1 | CDS | 47906650 | 47906795 | 47906650 | ID=Msa0551760-mRNA-1:cds;Parent=Msa0551760-mRNA-1 |
chr4_1 | CDS | 47906892 | 47906965 | 47906892 | ID=Msa0551760-mRNA-1:cds;Parent=Msa0551760-mRNA-1 |
chr4_1 | CDS | 47906990 | 47907090 | 47906990 | ID=Msa0551760-mRNA-1:cds;Parent=Msa0551760-mRNA-1 |
chr4_1 | CDS | 47907501 | 47907893 | 47907501 | ID=Msa0551760-mRNA-1:cds;Parent=Msa0551760-mRNA-1 |
chr4_1 | three_prime_UTR | 47907894 | 47907968 | 47907894 | ID=Msa0551760-mRNA-1:three_prime_utr;Parent=Msa0551760-mRNA-1 |
Gene Sequence |
Protein sequence |