AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0117650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0117650 MtrunA17_Chr1g0174701 96.124 516 10 4 1 515 1 507 0.0 1010
Msa0117650 MtrunA17_Chr7g0258321 74.944 443 91 6 73 515 42 464 0.0 672
Msa0117650 MtrunA17_Chr8g0353501 60.518 309 110 4 208 513 166 465 2.07e-129 384
Msa0117650 MtrunA17_Chr7g0256211 61.564 307 104 5 212 514 156 452 1.84e-127 379
Msa0117650 MtrunA17_Chr2g0321431 43.927 494 189 11 65 514 20 469 1.14e-125 376
Msa0117650 MtrunA17_Chr4g0026401 43.220 472 205 9 75 514 21 461 1.06e-115 350
Msa0117650 MtrunA17_Chr5g0422771 54.181 299 126 3 219 514 174 464 2.67e-111 338
Msa0117650 MtrunA17_Chr3g0124601 51.792 307 139 3 208 514 64 361 1.26e-103 315
Msa0117650 MtrunA17_Chr1g0210151 49.846 325 151 4 190 514 28 340 2.23e-102 311
Msa0117650 MtrunA17_Chr5g0424861 47.682 302 149 3 211 511 54 347 1.00e-85 268
Msa0117650 MtrunA17_Chr3g0115371 49.135 289 141 2 224 512 65 347 4.71e-85 267
Msa0117650 MtrunA17_Chr8g0382861 43.188 345 175 6 170 514 33 356 2.86e-84 265
Msa0117650 MtrunA17_Chr3g0093451 48.000 200 90 4 190 384 19 209 2.41e-56 187
Msa0117650 MtrunA17_Chr5g0424851 43.750 224 121 2 289 511 3 222 4.16e-54 188
Msa0117650 MtrunA17_Chr5g0424851 42.991 214 118 1 289 502 217 426 9.02e-52 182
Msa0117650 MtrunA17_Chr1g0196951 31.373 204 113 5 309 507 59 240 1.19e-20 91.3
Msa0117650 MtrunA17_Chr2g0315631 24.091 220 129 3 304 503 8 209 2.78e-12 66.2
Msa0117650 MtrunA17_Chr7g0242651 25.731 171 123 2 338 504 49 219 3.31e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0117650 AT5G06839.3 63.348 442 140 10 91 515 23 459 0.0 544
Msa0117650 AT5G06839.1 60.592 439 116 8 90 515 22 416 0.0 518
Msa0117650 AT5G06839.2 60.455 440 116 9 90 515 22 417 1.31e-180 513
Msa0117650 AT1G08320.1 46.596 470 199 10 69 514 12 453 4.14e-129 385
Msa0117650 AT1G08320.4 46.596 470 199 10 69 514 12 453 4.14e-129 385
Msa0117650 AT1G08320.3 46.596 470 199 10 69 514 12 453 4.14e-129 385
Msa0117650 AT1G08320.2 58.462 325 113 5 191 514 26 329 8.55e-127 374
Msa0117650 AT1G08320.5 58.462 325 113 5 191 514 26 329 8.55e-127 374
Msa0117650 AT5G06950.2 56.410 312 124 4 205 514 29 330 1.15e-118 352
Msa0117650 AT5G06950.4 56.410 312 124 4 205 514 29 330 1.15e-118 352
Msa0117650 AT5G06950.1 56.410 312 124 4 205 514 29 330 1.15e-118 352
Msa0117650 AT5G06950.5 56.410 312 124 4 205 514 29 330 1.15e-118 352
Msa0117650 AT5G06950.3 56.410 312 124 4 205 514 29 330 1.15e-118 352
Msa0117650 AT3G12250.5 55.663 309 127 3 208 514 3 303 9.15e-117 347
Msa0117650 AT3G12250.6 55.663 309 127 3 208 514 30 330 1.00e-116 347
Msa0117650 AT3G12250.2 55.663 309 127 3 208 514 30 330 1.00e-116 347
Msa0117650 AT3G12250.7 55.663 309 127 3 208 514 30 330 1.00e-116 347
Msa0117650 AT3G12250.1 55.663 309 127 3 208 514 30 330 1.00e-116 347
Msa0117650 AT3G12250.3 55.663 309 127 3 208 514 24 324 2.85e-116 346
Msa0117650 AT5G06960.2 59.661 295 109 3 222 514 44 330 3.20e-116 346
Msa0117650 AT5G06960.1 59.661 295 109 3 222 514 44 330 3.20e-116 346
Msa0117650 AT5G06960.3 59.661 295 109 3 222 514 24 310 3.40e-116 345
Msa0117650 AT3G12250.4 55.663 309 127 3 208 514 55 355 1.27e-115 345
Msa0117650 AT1G68640.1 56.209 306 126 3 210 513 152 451 2.32e-112 341
Msa0117650 AT5G10030.5 52.721 294 130 3 221 514 78 362 4.17e-102 311
Msa0117650 AT5G10030.3 52.721 294 130 3 221 514 78 362 4.17e-102 311
Msa0117650 AT5G10030.1 52.721 294 130 3 221 514 78 362 4.17e-102 311
Msa0117650 AT5G10030.4 52.721 294 130 3 221 514 78 362 4.17e-102 311
Msa0117650 AT5G10030.2 52.721 294 130 3 221 514 78 362 4.17e-102 311
Msa0117650 AT5G65210.6 50.658 304 136 5 211 514 7 296 2.66e-98 299
Msa0117650 AT5G65210.5 44.041 386 194 8 130 514 2 366 3.25e-98 301
Msa0117650 AT5G65210.7 44.041 386 194 8 130 514 2 366 3.25e-98 301
Msa0117650 AT5G65210.3 44.041 386 194 8 130 514 2 366 3.25e-98 301
Msa0117650 AT5G65210.1 44.041 386 194 8 130 514 2 366 3.25e-98 301
Msa0117650 AT5G65210.2 44.041 386 194 8 130 514 2 366 3.25e-98 301
Msa0117650 AT5G65210.4 44.041 386 194 8 130 514 2 366 3.25e-98 301
Msa0117650 AT1G22070.1 51.125 311 146 2 204 514 78 382 1.62e-97 300
Msa0117650 AT1G77920.1 49.074 324 135 4 204 514 60 366 3.71e-97 299
Msa0117650 AT1G58330.1 27.391 230 140 5 293 504 3 223 1.19e-16 79.7

Find 95 sgRNAs with CRISPR-Local

Find 442 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTCAAGTGCTTATGATTT+AGG 0.170937 1_3:-39032493 Msa0117650:CDS
GAGCATAGAATTGTTATTAT+TGG 0.196059 1_3:+39032933 None:intergenic
CATGACCATCAAATTTCTTT+TGG 0.210584 1_3:-39032790 Msa0117650:CDS
CTAATGGTATTCATAGAAAT+TGG 0.285782 1_3:+39030455 None:intergenic
ATTTATACCTTTGAATTAGA+TGG 0.288466 1_3:+39031700 None:intergenic
TGCTTATGATTTAGGTGAAT+TGG 0.291461 1_3:-39032485 Msa0117650:CDS
ACCCGCATATACCAAGTATT+TGG 0.301372 1_3:+39028903 None:intergenic
TTTAAGCAATCCTCCTAATA+TGG 0.308534 1_3:-39028789 Msa0117650:CDS
GCAATGTTTGATGTGGAGTA+TGG 0.316893 1_3:-39030317 Msa0117650:CDS
AATGGGAGGAGGTGCACTTT+TGG 0.318194 1_3:-39030495 Msa0117650:CDS
CTCATCACTCACACTATTCT+TGG 0.319137 1_3:+39024937 None:intergenic
CAGACCATCTGAACTCATTA+AGG 0.331549 1_3:-39030072 Msa0117650:intron
CCCATGTAGTTAGCCATATT+AGG 0.347360 1_3:+39028776 None:intergenic
GTTATATGTGGAAAATTGTT+TGG 0.359400 1_3:-39030213 Msa0117650:CDS
GGCTAACTACATGGGACAAA+TGG 0.386586 1_3:-39028768 Msa0117650:CDS
CACATGAAGCAACGTTCAGC+TGG 0.396922 1_3:+39030107 None:intergenic
GGAGTATGGGAGGTGGTTAG+AGG 0.399529 1_3:-39030303 Msa0117650:CDS
AAGAGTGGAGAGCTTGTTCA+TGG 0.411247 1_3:+39028739 None:intergenic
TCATTCCAAAAGAAATTTGA+TGG 0.416690 1_3:+39032785 None:intergenic
ATTTAATTAACCTTAGGATC+TGG 0.426639 1_3:+39031211 None:intergenic
TTCGAGCATTGAGTTCTCTC+TGG 0.430265 1_3:-39024974 Msa0117650:CDS
TCATAGAAATTGGAATTCCT+TGG 0.435269 1_3:+39030465 None:intergenic
TGGAAAGATACCTGAGCTAA+TGG 0.441696 1_3:+39030439 None:intergenic
TCGTCAAGCTGCAAGATGTT+TGG 0.442179 1_3:-39025024 Msa0117650:CDS
TATAATGTACCTACCTTGAC+AGG 0.447542 1_3:+39031397 None:intergenic
GGTTGAGTGCATCAAGCCCT+TGG 0.448691 1_3:+39028843 None:intergenic
GATGTTGATTCTGTTGTTGT+TGG 0.452856 1_3:+39032827 None:intergenic
TTATAGTCTCTGAAAGAGAT+TGG 0.452928 1_3:+39028822 None:intergenic
TCCTAATATGGCTAACTACA+TGG 0.453054 1_3:-39028777 Msa0117650:CDS
CTTACGGAGCACCAAATACT+TGG 0.457443 1_3:-39028914 Msa0117650:CDS
AGTATTTGGTGCTCCGTAAG+AGG 0.471286 1_3:+39028917 None:intergenic
CGTTGCTTCATGTGGATTGG+TGG 0.475727 1_3:-39030098 Msa0117650:CDS
AAGTCAAATTGAGCCTCTTA+CGG 0.480461 1_3:-39028930 Msa0117650:CDS
ACAGAGAACTCATCATCATC+AGG 0.490034 1_3:-39031784 Msa0117650:intron
GTTGAGTGCATCAAGCCCTT+GGG 0.490876 1_3:+39028844 None:intergenic
TTTAGTGGTGCAGGTGCAGA+AGG 0.498239 1_3:+39031421 None:intergenic
ACCAAATACTTGGTATATGC+GGG 0.505004 1_3:-39028904 Msa0117650:CDS
ACACTATTCTTGGCGAGGAC+GGG 0.506076 1_3:+39024947 None:intergenic
GTATTTGGTATAGGTTAGCA+TGG 0.513035 1_3:-39031524 Msa0117650:intron
TCTATGAATACCATTAGCTC+AGG 0.516579 1_3:-39030449 Msa0117650:intron
ACTTGCATGAAAATGAGCTT+AGG 0.517257 1_3:-39030235 Msa0117650:CDS
AAAACCATCTCAACCGTCCA+TGG 0.517927 1_3:-39031470 Msa0117650:CDS
TTTACCTTAATGAGTTCAGA+TGG 0.518372 1_3:+39030068 None:intergenic
TAATAACAATTCTATGCTCA+TGG 0.520824 1_3:-39032929 Msa0117650:CDS
ATCTCAACCGTCCATGGAGT+TGG 0.523885 1_3:-39031464 Msa0117650:CDS
CACCAAATACTTGGTATATG+CGG 0.532159 1_3:-39028905 Msa0117650:CDS
ACCTTTGAATTAGATGGTGG+TGG 0.533763 1_3:+39031706 None:intergenic
AACTCCATGGACGGTTGAGA+TGG 0.534438 1_3:+39031466 None:intergenic
CAGCTGAACGTTGCTTCATG+TGG 0.535836 1_3:-39030106 Msa0117650:CDS
CACACTATTCTTGGCGAGGA+CGG 0.538683 1_3:+39024946 None:intergenic
TGGTTTGCCAACTCCATGGA+CGG 0.539075 1_3:+39031457 None:intergenic
ATCAACACAAGAGGCAGAAG+AGG 0.540377 1_3:-39028873 Msa0117650:CDS
TCGTTGGTTTGCCAACTCCA+TGG 0.541761 1_3:+39031453 None:intergenic
CAAGTAGTTGCTAGGCATAG+AGG 0.542058 1_3:+39032744 None:intergenic
GAACGTTGCTTCATGTGGAT+TGG 0.542533 1_3:-39030101 Msa0117650:CDS
GGTGGTTAGAGGAGCATCAC+AGG 0.543826 1_3:-39030292 Msa0117650:CDS
GATGCAGACGATGAACTGTT+TGG 0.543853 1_3:+39025060 None:intergenic
ACATGAAGCAACGTTCAGCT+GGG 0.545343 1_3:+39030108 None:intergenic
GCTACATGCATTGGTTGAGA+TGG 0.551490 1_3:+39031730 None:intergenic
AAAACTCACAAGTAGTTGCT+AGG 0.556391 1_3:+39032736 None:intergenic
AAATGAGCTTAGGTTATATG+TGG 0.558714 1_3:-39030225 Msa0117650:CDS
TAGGGCGTGTTAATGGGAGG+AGG 0.559293 1_3:-39030506 Msa0117650:CDS
ACCACCACCATCTAATTCAA+AGG 0.566192 1_3:-39031707 Msa0117650:intron
TATTTGGTATAGGTTAGCAT+GGG 0.566436 1_3:-39031523 Msa0117650:intron
GGAGCCACTTGTTATTGGAG+AGG 0.576956 1_3:+39031495 None:intergenic
GGTGGTGGTGCTACATGCAT+TGG 0.577778 1_3:+39031721 None:intergenic
CTTTGATCTTGAACACTAGA+GGG 0.579134 1_3:+39032418 None:intergenic
GCAGAAGAGGCACTTTCCCA+AGG 0.580930 1_3:-39028860 Msa0117650:CDS
GGGAAAATGTTAAGAGTTGG+TGG 0.582239 1_3:+39031751 None:intergenic
CAATGTTTGATGTGGAGTAT+GGG 0.584437 1_3:-39030316 Msa0117650:CDS
AGAGGCTGCAATGTTTGATG+TGG 0.585256 1_3:-39030324 Msa0117650:CDS
ATGTAGTTAGCCATATTAGG+AGG 0.586012 1_3:+39028779 None:intergenic
TATACCTTTGAATTAGATGG+TGG 0.586657 1_3:+39031703 None:intergenic
TGCACCACTAAAACCTGTCA+AGG 0.587111 1_3:-39031410 Msa0117650:intron
TCTTTGATCTTGAACACTAG+AGG 0.589650 1_3:+39032417 None:intergenic
ATAGAGGATGAAGATGAAGA+TGG 0.597582 1_3:+39032760 None:intergenic
CCTAATATGGCTAACTACAT+GGG 0.597846 1_3:-39028776 Msa0117650:CDS
CAGAAGAGGCACTTTCCCAA+GGG 0.599073 1_3:-39028859 Msa0117650:CDS
CTACATGCATTGGTTGAGAT+GGG 0.602831 1_3:+39031731 None:intergenic
GATGGGAAAATGTTAAGAGT+TGG 0.603515 1_3:+39031748 None:intergenic
TCTCACAAAACTTTCAAGAG+TGG 0.609018 1_3:+39028724 None:intergenic
TTCAGCAGCTAGAAACAAGT+AGG 0.617268 1_3:-39030929 Msa0117650:CDS
CATGAAGCAACGTTCAGCTG+GGG 0.618932 1_3:+39030109 None:intergenic
CACTCACACTATTCTTGGCG+AGG 0.619291 1_3:+39024942 None:intergenic
TTGATGTGGAGTATGGGAGG+TGG 0.624452 1_3:-39030310 Msa0117650:CDS
GCAGAAAGAGAATAATCGCA+AGG 0.635102 1_3:-39031272 Msa0117650:intron
CACTGCAGGCAGATAATCTG+AGG 0.637739 1_3:-39025085 Msa0117650:intron
ACTTCAAGTTCTGAACATGA+AGG 0.639217 1_3:-39031244 Msa0117650:CDS
TTAGTGGTGCAGGTGCAGAA+GGG 0.642942 1_3:+39031422 None:intergenic
GTTGCAACAATCAACACAAG+AGG 0.644854 1_3:-39028882 Msa0117650:CDS
TTAACCTCTCCAATAACAAG+TGG 0.650451 1_3:-39031499 Msa0117650:CDS
TGTTTGATGTGGAGTATGGG+AGG 0.654392 1_3:-39030313 Msa0117650:CDS
AAGACTTGCTCAGAATAGAG+AGG 0.666657 1_3:-39031113 Msa0117650:CDS
AAAATGTTAAGAGTTGGTGG+TGG 0.691086 1_3:+39031754 None:intergenic
TGATGGTCATGCATATGATG+AGG 0.700141 1_3:+39032802 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAAATTTAAAATATAAAT+GGG + chr1_3:39029994-39030013 None:intergenic 0.0%
!!! ATTATTTGATAATTTGTATT+TGG - chr1_3:39026411-39026430 Msa0117650:intron 10.0%
!! GATTAATTAGAATAAAAAAT+GGG + chr1_3:39026633-39026652 None:intergenic 10.0%
!! TGATTAATTAGAATAAAAAA+TGG + chr1_3:39026634-39026653 None:intergenic 10.0%
!! TAATTAATTTAATTAACCTT+AGG + chr1_3:39026748-39026767 None:intergenic 10.0%
!!! TTTTATATATTTCATTTTAG+GGG - chr1_3:39027338-39027357 Msa0117650:intron 10.0%
!!! AATTTGATTTTATTAGTATA+TGG + chr1_3:39027534-39027553 None:intergenic 10.0%
!!! TGTAACAATTTTTTTTTTTT+TGG - chr1_3:39027592-39027611 Msa0117650:intron 10.0%
!!! TTTTATTTAGATATCTATAA+CGG + chr1_3:39028107-39028126 None:intergenic 10.0%
!! TTAAACAAATAAAAAAAGAA+TGG + chr1_3:39028296-39028315 None:intergenic 10.0%
!!! TTTTTATATATAATAGTGAA+TGG + chr1_3:39028657-39028676 None:intergenic 10.0%
!! AAAAAAAAATTACTACATAA+GGG + chr1_3:39028909-39028928 None:intergenic 10.0%
!! TAAAAAAAAATTACTACATA+AGG + chr1_3:39028910-39028929 None:intergenic 10.0%
!!! ACATTTATTATATTGTTTTT+TGG - chr1_3:39028949-39028968 Msa0117650:intron 10.0%
!!! ATTAATATTGTTTTATTTGA+TGG - chr1_3:39028976-39028995 Msa0117650:intron 10.0%
!! AAATTAATAAAAATGAAGAT+GGG + chr1_3:39029332-39029351 None:intergenic 10.0%
!! AAAATTAATAAAAATGAAGA+TGG + chr1_3:39029333-39029352 None:intergenic 10.0%
!!! TTTTTTTTCAATTTATTTGT+TGG + chr1_3:39029548-39029567 None:intergenic 10.0%
!! AAATATATTTGTACTTTATT+AGG - chr1_3:39030172-39030191 Msa0117650:CDS 10.0%
!! TTATATCTTTATACTATATA+TGG - chr1_3:39030657-39030676 Msa0117650:intron 10.0%
!! TAATTTAAACAAAAATTTGT+AGG + chr1_3:39030934-39030953 None:intergenic 10.0%
!!! TTGATTGTTTTTTAATTTAT+TGG + chr1_3:39031296-39031315 None:intergenic 10.0%
!! AAAAATTAATTAAATGAGAA+AGG + chr1_3:39032081-39032100 None:intergenic 10.0%
!!! TAGTTTTGAAAATTATAAAT+TGG + chr1_3:39032335-39032354 None:intergenic 10.0%
!!! AAAATAAAAGTACTAGTATA+CGG + chr1_3:39025757-39025776 None:intergenic 15.0%
!!! TATTTGCTTTTATACATTTT+AGG - chr1_3:39026942-39026961 Msa0117650:intron 15.0%
!!! TTTATATATTTCATTTTAGG+GGG - chr1_3:39027339-39027358 Msa0117650:intron 15.0%
!!! AATGTTTTGTTTGATTTTTA+GGG - chr1_3:39027426-39027445 Msa0117650:intron 15.0%
!!! TTAAAACCAATATTTCTATA+AGG + chr1_3:39027935-39027954 None:intergenic 15.0%
!!! TGTATTTAGTATTTTACTTT+TGG - chr1_3:39028793-39028812 Msa0117650:CDS 15.0%
!! ATTATTTCAAATTGAATTTG+TGG - chr1_3:39029592-39029611 Msa0117650:intron 15.0%
!!! CTCTAAAAAAATAAATAAGT+TGG + chr1_3:39029872-39029891 None:intergenic 15.0%
!!! CAACTTATTTATTTTTTTAG+AGG - chr1_3:39029870-39029889 Msa0117650:intron 15.0%
!!! AGTTTGTATTATTTTATGTA+AGG + chr1_3:39030059-39030078 None:intergenic 15.0%
!! ACTAAAAAAAGACATAAAAA+TGG - chr1_3:39030076-39030095 Msa0117650:CDS 15.0%
!! TTAATTAACCTTAAATAAGT+TGG + chr1_3:39030109-39030128 None:intergenic 15.0%
!!! ACTTTTATCACAAAAAAAAA+AGG - chr1_3:39030218-39030237 Msa0117650:CDS 15.0%
!! AAAAATGAAATGTTGTATAA+CGG - chr1_3:39030771-39030790 Msa0117650:intron 15.0%
!!! TTAATTTTTTTTTTTTGTGG+TGG + chr1_3:39031075-39031094 None:intergenic 15.0%
!! ATATTCACTTAATCAAATTA+TGG + chr1_3:39031671-39031690 None:intergenic 15.0%
!!! TGAAGAAAATTTTCAATTAT+TGG - chr1_3:39031742-39031761 Msa0117650:CDS 15.0%
!!! TAAAAAATCTTTTGAATCAT+AGG + chr1_3:39032148-39032167 None:intergenic 15.0%
!! AAAAATAAACAGTAATCAAA+TGG + chr1_3:39032234-39032253 None:intergenic 15.0%
!!! TTTTCTTCATATAATTTTCA+TGG - chr1_3:39032294-39032313 Msa0117650:intron 15.0%
!!! TATTTGTTTTCATAAGAAAC+TGG + chr1_3:39025346-39025365 None:intergenic 20.0%
!!! CTGTTTTCAGTATTAATTTT+TGG - chr1_3:39025619-39025638 Msa0117650:intron 20.0%
!! ATTTATACCTTTGAATTAGA+TGG + chr1_3:39026253-39026272 None:intergenic 20.0%
!!! TGATAATTTGTATTTGGTAT+AGG - chr1_3:39026417-39026436 Msa0117650:intron 20.0%
!! CTTATATACCAATTTATTTC+AGG - chr1_3:39026992-39027011 Msa0117650:intron 20.0%
!!! TAGTTTTTACACAAAAATAG+AGG + chr1_3:39027107-39027126 None:intergenic 20.0%
!!! TTTCATTTCAGAAGTATATT+CGG + chr1_3:39027242-39027261 None:intergenic 20.0%
!!! TCAAACAAAACATTGTTTTT+AGG + chr1_3:39027420-39027439 None:intergenic 20.0%
!!! CAATGTTTTGTTTGATTTTT+AGG - chr1_3:39027425-39027444 Msa0117650:intron 20.0%
!!! AAAGTTTGATATGTAGTTTT+TGG + chr1_3:39028053-39028072 None:intergenic 20.0%
!! AAAAACTACATATCAAACTT+TGG - chr1_3:39028052-39028071 Msa0117650:intron 20.0%
!!! CAATAACAAATTTTAGTGAA+AGG + chr1_3:39028481-39028500 None:intergenic 20.0%
!!! CTTTCACTAAAATTTGTTAT+TGG - chr1_3:39028479-39028498 Msa0117650:intron 20.0%
!! TATATATAATAGTGAATGGA+GGG + chr1_3:39028653-39028672 None:intergenic 20.0%
!! TTATATATAATAGTGAATGG+AGG + chr1_3:39028654-39028673 None:intergenic 20.0%
!! CATTCATTAAATAATGTATG+TGG - chr1_3:39028692-39028711 Msa0117650:intron 20.0%
!! CAAGTGATGTAATAATATTT+AGG - chr1_3:39028846-39028865 Msa0117650:CDS 20.0%
!!! TATAATGTTTTGCATTTTCT+TGG - chr1_3:39029301-39029320 Msa0117650:intron 20.0%
!!! TTTTCTGTTTAAGATTGTAT+CGG - chr1_3:39029352-39029371 Msa0117650:intron 20.0%
!! AACTTGGTAAAAAATTTCAA+GGG + chr1_3:39029671-39029690 None:intergenic 20.0%
!! TAACTTGGTAAAAAATTTCA+AGG + chr1_3:39029672-39029691 None:intergenic 20.0%
!! AACCATGAAAAATATCTTAA+AGG + chr1_3:39030313-39030332 None:intergenic 20.0%
!! ATTTATAACATTGAGTATCA+AGG - chr1_3:39030378-39030397 Msa0117650:intron 20.0%
!! TTAAATTCATGTAATCGATT+TGG - chr1_3:39031091-39031110 Msa0117650:CDS 20.0%
!!! TTCTATAACTTTTAAACGTT+CGG + chr1_3:39031416-39031435 None:intergenic 20.0%
!! CATATGAATAATTTGAGTAA+GGG - chr1_3:39031534-39031553 Msa0117650:intron 20.0%
!!! TTGGTAATTACTTTAAAATG+TGG - chr1_3:39031761-39031780 Msa0117650:CDS 20.0%
!! TGAACTTTGCTAAATAATAA+TGG - chr1_3:39031917-39031936 Msa0117650:intron 20.0%
!! CATTCAAATAAATTATCAGT+TGG + chr1_3:39031960-39031979 None:intergenic 20.0%
!! AAAATATAGTGAACATATAG+AGG + chr1_3:39032174-39032193 None:intergenic 20.0%
!!! TGAATAGTCTTCTTTTTTTT+TGG - chr1_3:39032471-39032490 Msa0117650:CDS 20.0%
!! TAGAATAACAAAGAGTTATA+TGG + chr1_3:39032724-39032743 None:intergenic 20.0%
!! GAGCATAGAATTGTTATTAT+TGG + chr1_3:39025020-39025039 None:intergenic 25.0%
! TAATAACAATTCTATGCTCA+TGG - chr1_3:39025021-39025040 Msa0117650:CDS 25.0%
! TCATTCCAAAAGAAATTTGA+TGG + chr1_3:39025168-39025187 None:intergenic 25.0%
!!! TCAAGCATTTTTTTTGTATC+TGG - chr1_3:39025489-39025508 Msa0117650:intron 25.0%
! ATTTAGTTGAAGAAGACAAA+GGG + chr1_3:39026033-39026052 None:intergenic 25.0%
! TATTTAGTTGAAGAAGACAA+AGG + chr1_3:39026034-39026053 None:intergenic 25.0%
!! CCAAGTCTTATCTTAATTAT+GGG + chr1_3:39026084-39026103 None:intergenic 25.0%
!! ACCAAGTCTTATCTTAATTA+TGG + chr1_3:39026085-39026104 None:intergenic 25.0%
! TGGTAAGATATTATTGATGA+TGG - chr1_3:39026101-39026120 Msa0117650:intron 25.0%
! TTTGCAATATGAATGATGTA+TGG - chr1_3:39026656-39026675 Msa0117650:intron 25.0%
! ATTTAATTAACCTTAGGATC+TGG + chr1_3:39026742-39026761 None:intergenic 25.0%
!! AAGCAAATACTACAGTTTTT+GGG + chr1_3:39026931-39026950 None:intergenic 25.0%
!! AAAGCAAATACTACAGTTTT+TGG + chr1_3:39026932-39026951 None:intergenic 25.0%
! AACATAAGCCTGAAATAAAT+TGG + chr1_3:39027003-39027022 None:intergenic 25.0%
! TTAAAAATCTGTATCAAGAC+TGG - chr1_3:39027131-39027150 Msa0117650:intron 25.0%
!!! ATCTGTTCTAAATTTTGACT+AGG + chr1_3:39027289-39027308 None:intergenic 25.0%
! CTAATGGTATTCATAGAAAT+TGG + chr1_3:39027498-39027517 None:intergenic 25.0%
!! TCTGTATCAAGAATTTTGTA+AGG + chr1_3:39027571-39027590 None:intergenic 25.0%
!!! TTTTTGGAACAAATTTTCAG+AGG - chr1_3:39027608-39027627 Msa0117650:intron 25.0%
! GTTATATGTGGAAAATTGTT+TGG - chr1_3:39027737-39027756 Msa0117650:intron 25.0%
!!! TTCTAGCTAGAATATTTTTG+AGG + chr1_3:39027785-39027804 None:intergenic 25.0%
!!! TGTCACAAAATTTTTAGTGT+GGG + chr1_3:39028181-39028200 None:intergenic 25.0%
!!! TTGTCACAAAATTTTTAGTG+TGG + chr1_3:39028182-39028201 None:intergenic 25.0%
! TGATAAATCTCCAAAACAAA+AGG - chr1_3:39028207-39028226 Msa0117650:intron 25.0%
! GATAAATCTCCAAAACAAAA+GGG - chr1_3:39028208-39028227 Msa0117650:intron 25.0%
! AATTTGACTAAAACTGTAGT+TGG - chr1_3:39028342-39028361 Msa0117650:intron 25.0%
! AGTTCCCAAAGTAAATTTAA+GGG - chr1_3:39028365-39028384 Msa0117650:intron 25.0%
! ATTGCCCTTAAATTTACTTT+GGG + chr1_3:39028372-39028391 None:intergenic 25.0%
!! AAGATTTTCAGTATAGAGTT+AGG - chr1_3:39028434-39028453 Msa0117650:intron 25.0%
!!! ACAAATTTTAGTGAAAGGTA+TGG + chr1_3:39028476-39028495 None:intergenic 25.0%
! TGTTATTGGAATCAGAAAAA+TGG - chr1_3:39028493-39028512 Msa0117650:intron 25.0%
! AATATGGATCTCTCAAAAAT+AGG - chr1_3:39028883-39028902 Msa0117650:CDS 25.0%
! GCAAAACATTATAAGTTGTT+GGG + chr1_3:39029294-39029313 None:intergenic 25.0%
! TGCAAAACATTATAAGTTGT+TGG + chr1_3:39029295-39029314 None:intergenic 25.0%
! GGTATAATATATATGTTCCA+TGG + chr1_3:39029527-39029546 None:intergenic 25.0%
! ACTTGGTAAAAAATTTCAAG+GGG + chr1_3:39029670-39029689 None:intergenic 25.0%
! AGTAGTAGTTTATAATGTGA+GGG + chr1_3:39029781-39029800 None:intergenic 25.0%
! AAGTAGTAGTTTATAATGTG+AGG + chr1_3:39029782-39029801 None:intergenic 25.0%
!!! CTCTCATTTTGATATTAGAA+AGG - chr1_3:39029906-39029925 Msa0117650:intron 25.0%
! GAGAAATACCAACTTATTTA+AGG - chr1_3:39030098-39030117 Msa0117650:CDS 25.0%
! TACAAATCTAGACTTACATT+TGG + chr1_3:39030137-39030156 None:intergenic 25.0%
! TACTAGAAAAAGATTAGCAA+AGG - chr1_3:39030261-39030280 Msa0117650:CDS 25.0%
! TAGATGAAGATTGTATCAAT+GGG + chr1_3:39030466-39030485 None:intergenic 25.0%
! TTAGATGAAGATTGTATCAA+TGG + chr1_3:39030467-39030486 None:intergenic 25.0%
!! TATGTTATGTCTTCAAGTTA+CGG + chr1_3:39030534-39030553 None:intergenic 25.0%
! ATCTTAGGAAAATATGTGTT+TGG + chr1_3:39030874-39030893 None:intergenic 25.0%
!! AAACACATATTTTCCTAAGA+TGG - chr1_3:39030873-39030892 Msa0117650:intron 25.0%
! TGATAAAAAAACACCATCTT+AGG + chr1_3:39030889-39030908 None:intergenic 25.0%
! ATGTTGTAAAGTACAATAAG+AGG - chr1_3:39031265-39031284 Msa0117650:CDS 25.0%
! TGAATTGGACTTATATGTAT+CGG + chr1_3:39031369-39031388 None:intergenic 25.0%
! AGTTATAGAATTTAACCATC+AGG - chr1_3:39031426-39031445 Msa0117650:CDS 25.0%
! GCATATGAATAATTTGAGTA+AGG - chr1_3:39031533-39031552 Msa0117650:intron 25.0%
! ATAAACGAACAATAGACATT+TGG - chr1_3:39031612-39031631 Msa0117650:intron 25.0%
! TAAACGAACAATAGACATTT+GGG - chr1_3:39031613-39031632 Msa0117650:intron 25.0%
!! TTTAGGATATCTAAACAACT+TGG + chr1_3:39031889-39031908 None:intergenic 25.0%
! CAAAGTTCACAAAGAAATTT+AGG + chr1_3:39031906-39031925 None:intergenic 25.0%
! CAAACTAGAATAAGAAACTT+AGG - chr1_3:39031996-39032015 Msa0117650:intron 25.0%
! TAAGAAACTTAGGAATCATT+AGG - chr1_3:39032006-39032025 Msa0117650:intron 25.0%
! AAAACTGGTCAAATTGAAAA+GGG + chr1_3:39032112-39032131 None:intergenic 25.0%
! AAAAACTGGTCAAATTGAAA+AGG + chr1_3:39032113-39032132 None:intergenic 25.0%
!!! ATTTGACCAGTTTTTAGTTT+TGG - chr1_3:39032118-39032137 Msa0117650:intron 25.0%
!! AGTCAGTTGATTTAAATTAC+TGG - chr1_3:39032408-39032427 Msa0117650:intron 25.0%
!!! ATAGTCTTCTTTTTTTTTGG+TGG - chr1_3:39032474-39032493 Msa0117650:CDS 25.0%
! AATTCAAACTCAAACTAGAA+GGG + chr1_3:39032788-39032807 None:intergenic 25.0%
! AAATTCAAACTCAAACTAGA+AGG + chr1_3:39032789-39032808 None:intergenic 25.0%
CTAAAAAACTTGCATCTACT+TGG + chr1_3:39024994-39025013 None:intergenic 30.0%
!!! CAAGTAGATGCAAGTTTTTT+AGG - chr1_3:39024992-39025011 Msa0117650:CDS 30.0%
! TTGAGATTCATGTGAGTTTT+TGG + chr1_3:39025050-39025069 None:intergenic 30.0%
! GATGATGAAGAAGATTTTGA+TGG + chr1_3:39025102-39025121 None:intergenic 30.0%
! CATGACCATCAAATTTCTTT+TGG - chr1_3:39025160-39025179 Msa0117650:intron 30.0%
GATTCAAGTGCTTATGATTT+AGG - chr1_3:39025457-39025476 Msa0117650:intron 30.0%
TGCTTATGATTTAGGTGAAT+TGG - chr1_3:39025465-39025484 Msa0117650:intron 30.0%
!!! GCATTTTTTTTGTATCTGGA+TGG - chr1_3:39025493-39025512 Msa0117650:intron 30.0%
TTTGGTCAAATTCAGTAAGA+TGG - chr1_3:39025637-39025656 Msa0117650:intron 30.0%
TTGGTCAAATTCAGTAAGAT+GGG - chr1_3:39025638-39025657 Msa0117650:intron 30.0%
!! TTTTAAAGATTCTCTGTCTG+AGG - chr1_3:39025693-39025712 Msa0117650:intron 30.0%
TTTAAAGATTCTCTGTCTGA+GGG - chr1_3:39025694-39025713 Msa0117650:intron 30.0%
TCATGACATATAACAAACCT+TGG - chr1_3:39025918-39025937 Msa0117650:intron 30.0%
ATTATGGGAAATGTAACACT+TGG + chr1_3:39026069-39026088 None:intergenic 30.0%
CCCATAATTAAGATAAGACT+TGG - chr1_3:39026081-39026100 Msa0117650:intron 30.0%
TATACCTTTGAATTAGATGG+TGG + chr1_3:39026250-39026269 None:intergenic 30.0%
ATTATGAGATTGTCAACTCA+AGG + chr1_3:39026336-39026355 None:intergenic 30.0%
TATTTGGTATAGGTTAGCAT+GGG - chr1_3:39026427-39026446 Msa0117650:intron 30.0%
AAAACACAATCATCCTGTAA+GGG + chr1_3:39026904-39026923 None:intergenic 30.0%
AAAAACACAATCATCCTGTA+AGG + chr1_3:39026905-39026924 None:intergenic 30.0%
TCATAGAAATTGGAATTCCT+TGG + chr1_3:39027488-39027507 None:intergenic 30.0%
AAATGAGCTTAGGTTATATG+TGG - chr1_3:39027725-39027744 Msa0117650:intron 30.0%
TTTACCTTAATGAGTTCAGA+TGG + chr1_3:39027885-39027904 None:intergenic 30.0%
AAGGCTAGGTTAATCATTAA+TGG + chr1_3:39027916-39027935 None:intergenic 30.0%
!! ACCTAGCCTTATAGAAATAT+TGG - chr1_3:39027926-39027945 Msa0117650:intron 30.0%
! ACCAATATTTCTATAAGGCT+AGG + chr1_3:39027930-39027949 None:intergenic 30.0%
!!! TTGGTTTTAAATTGCCGTTA+CGG - chr1_3:39027945-39027964 Msa0117650:intron 30.0%
TGGAAATGTTTCGAGAAATT+TGG + chr1_3:39028033-39028052 None:intergenic 30.0%
GGAATATGTGATCAAAATTG+CGG - chr1_3:39028073-39028092 Msa0117650:intron 30.0%
!! TCTAGAATACCCTTTTGTTT+TGG + chr1_3:39028220-39028239 None:intergenic 30.0%
GAGTTCCCAAAGTAAATTTA+AGG - chr1_3:39028364-39028383 Msa0117650:intron 30.0%
CATTGCCCTTAAATTTACTT+TGG + chr1_3:39028373-39028392 None:intergenic 30.0%
CAAAGTAAATTTAAGGGCAA+TGG - chr1_3:39028371-39028390 Msa0117650:intron 30.0%
ATGAGTGAATGTGGAATTAA+AGG - chr1_3:39028404-39028423 Msa0117650:intron 30.0%
!! ATCAGAAAAATGGACTAAGA+TGG - chr1_3:39028503-39028522 Msa0117650:intron 30.0%
AGATGGAAATAGAAGAAAAG+TGG - chr1_3:39028520-39028539 Msa0117650:intron 30.0%
!!! ACTTGTTTTACACGAGTTTA+TGG + chr1_3:39028612-39028631 None:intergenic 30.0%
!! TTTTACTTTTGGTTGTTGCT+AGG - chr1_3:39028804-39028823 Msa0117650:CDS 30.0%
GGCATGTCAGAAAAAAAATA+TGG - chr1_3:39028867-39028886 Msa0117650:CDS 30.0%
! TTATAGTCTCTGAAAGAGAT+TGG + chr1_3:39029131-39029150 None:intergenic 30.0%
TTTAAGCAATCCTCCTAATA+TGG - chr1_3:39029161-39029180 Msa0117650:intron 30.0%
CCAACTTAGTGATTAAGTAA+GGG + chr1_3:39029437-39029456 None:intergenic 30.0%
CCTTACTTAATCACTAAGTT+GGG - chr1_3:39029435-39029454 Msa0117650:intron 30.0%
TGTAACTGCAATTTATACCA+TGG - chr1_3:39029507-39029526 Msa0117650:intron 30.0%
! TTGTGAATAGTTTGTGATCT+TGG - chr1_3:39029626-39029645 Msa0117650:intron 30.0%
!!! ATCTTGGTTAACTAGTTTTG+TGG - chr1_3:39029642-39029661 Msa0117650:intron 30.0%
CTTGGTAAAAAATTTCAAGG+GGG + chr1_3:39029669-39029688 None:intergenic 30.0%
GTTATGGACTTATAGTAACT+TGG + chr1_3:39029687-39029706 None:intergenic 30.0%
AATCTGTTCCTTCAATCATA+TGG - chr1_3:39029736-39029755 Msa0117650:intron 30.0%
ATCTGTTCCTTCAATCATAT+GGG - chr1_3:39029737-39029756 Msa0117650:intron 30.0%
AAATCTAGACTTACATTTGG+TGG + chr1_3:39030134-39030153 None:intergenic 30.0%
!! TTAGCAAAGGTACCAATATA+AGG - chr1_3:39030274-39030293 Msa0117650:CDS 30.0%
!!! GGCCTTTAAGATATTTTTCA+TGG - chr1_3:39030308-39030327 Msa0117650:CDS 30.0%
AGCTAAAAAGCAACAAGTTA+TGG + chr1_3:39030566-39030585 None:intergenic 30.0%
!! TCTAAAACTCAAACACGTTT+TGG - chr1_3:39030588-39030607 Msa0117650:intron 30.0%
! CTAAAACTCAAACACGTTTT+GGG - chr1_3:39030589-39030608 Msa0117650:intron 30.0%
!!! TTGGGTTGGCTTATTTATTT+TGG - chr1_3:39030607-39030626 Msa0117650:intron 30.0%
TAGGAAAATATGTGTTTGGT+CGG + chr1_3:39030870-39030889 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG - chr1_3:39031027-39031046 Msa0117650:intron 30.0%
TGCATAATATATGCAAGGTT+CGG - chr1_3:39031032-39031051 Msa0117650:intron 30.0%
!!! TTTTTTTTTTTGTGGTGGCA+GGG + chr1_3:39031070-39031089 None:intergenic 30.0%
!!! TTTTTTTTTTTTGTGGTGGC+AGG + chr1_3:39031071-39031090 None:intergenic 30.0%
CACTTAATCAAATTATGGAG+TGG + chr1_3:39031666-39031685 None:intergenic 30.0%
GGTATACCAAAACTAAAAAC+TGG + chr1_3:39032127-39032146 None:intergenic 30.0%
GACAATGCATAAAATATGCA+AGG + chr1_3:39032522-39032541 None:intergenic 30.0%
AGAACTTTACTGAGAAAAGA+AGG - chr1_3:39032621-39032640 Msa0117650:intron 30.0%
! TTAATTTGAAAACTCACTGC+AGG - chr1_3:39032851-39032870 Msa0117650:CDS 30.0%
!! GATGTTGATTCTGTTGTTGT+TGG + chr1_3:39025126-39025145 None:intergenic 35.0%
ATAGAGGATGAAGATGAAGA+TGG + chr1_3:39025193-39025212 None:intergenic 35.0%
AAAACTCACAAGTAGTTGCT+AGG + chr1_3:39025217-39025236 None:intergenic 35.0%
TTCATAAGAAACTGGCATGT+TGG + chr1_3:39025338-39025357 None:intergenic 35.0%
CTTTGATCTTGAACACTAGA+GGG + chr1_3:39025535-39025554 None:intergenic 35.0%
TCTTTGATCTTGAACACTAG+AGG + chr1_3:39025536-39025555 None:intergenic 35.0%
! ATGCATACCACCTTTTTCTA+AGG + chr1_3:39025955-39025974 None:intergenic 35.0%
!! AAAATGTTAAGAGTTGGTGG+TGG + chr1_3:39026199-39026218 None:intergenic 35.0%
GATGGGAAAATGTTAAGAGT+TGG + chr1_3:39026205-39026224 None:intergenic 35.0%
GTATTTGGTATAGGTTAGCA+TGG - chr1_3:39026426-39026445 Msa0117650:intron 35.0%
TTAACCTCTCCAATAACAAG+TGG - chr1_3:39026451-39026470 Msa0117650:intron 35.0%
!!! TTTTTGGAGCCACTTGTTAT+TGG + chr1_3:39026463-39026482 None:intergenic 35.0%
TATAATGTACCTACCTTGAC+AGG + chr1_3:39026556-39026575 None:intergenic 35.0%
!! ACTTCAAGTTCTGAACATGA+AGG - chr1_3:39026706-39026725 Msa0117650:intron 35.0%
AAAAAGCAGGCTTAGGAAAA+AGG - chr1_3:39026867-39026886 Msa0117650:intron 35.0%
CTACAATTGTTGGATCATGT+TGG + chr1_3:39027388-39027407 None:intergenic 35.0%
ATCCAACAATTGTAGAGCAA+AGG - chr1_3:39027393-39027412 Msa0117650:intron 35.0%
!!! TGATTTTTAGGGCGTGTTAA+TGG - chr1_3:39027437-39027456 Msa0117650:intron 35.0%
!!! GATTTTTAGGGCGTGTTAAT+GGG - chr1_3:39027438-39027457 Msa0117650:intron 35.0%
TCTATGAATACCATTAGCTC+AGG - chr1_3:39027501-39027520 Msa0117650:intron 35.0%
CAATGTTTGATGTGGAGTAT+GGG - chr1_3:39027634-39027653 Msa0117650:intron 35.0%
ACTTGCATGAAAATGAGCTT+AGG - chr1_3:39027715-39027734 Msa0117650:intron 35.0%
!!! GATGTGTTCCATCTTGTTTT+TGG - chr1_3:39027807-39027826 Msa0117650:intron 35.0%
!!! TCCATCTTGTTTTTGGAATG+TGG - chr1_3:39027814-39027833 Msa0117650:intron 35.0%
TCCACATTCCAAAAACAAGA+TGG + chr1_3:39027818-39027837 None:intergenic 35.0%
TTTGATGTCATGAGTGAATG+TGG - chr1_3:39028395-39028414 Msa0117650:intron 35.0%
!! AGTGAAAGGTATGGCTTTAT+GGG + chr1_3:39028467-39028486 None:intergenic 35.0%
! TAGTGAAAGGTATGGCTTTA+TGG + chr1_3:39028468-39028487 None:intergenic 35.0%
GAAATAGAAGAAAAGTGGCA+CGG - chr1_3:39028525-39028544 Msa0117650:intron 35.0%
AAATAGAAGAAAAGTGGCAC+GGG - chr1_3:39028526-39028545 Msa0117650:intron 35.0%
TCTCTATCTCTCATTGTCTA+TGG - chr1_3:39028549-39028568 Msa0117650:intron 35.0%
CTCTATCTCTCATTGTCTAT+GGG - chr1_3:39028550-39028569 Msa0117650:intron 35.0%
ACGAGTTTATGGTCAATTAG+GGG + chr1_3:39028601-39028620 None:intergenic 35.0%
CACGAGTTTATGGTCAATTA+GGG + chr1_3:39028602-39028621 None:intergenic 35.0%
ACACGAGTTTATGGTCAATT+AGG + chr1_3:39028603-39028622 None:intergenic 35.0%
AAGTCAAATTGAGCCTCTTA+CGG - chr1_3:39029020-39029039 Msa0117650:intron 35.0%
CACCAAATACTTGGTATATG+CGG - chr1_3:39029045-39029064 Msa0117650:intron 35.0%
ACCAAATACTTGGTATATGC+GGG - chr1_3:39029046-39029065 Msa0117650:intron 35.0%
ATGTAGTTAGCCATATTAGG+AGG + chr1_3:39029174-39029193 None:intergenic 35.0%
TCCTAATATGGCTAACTACA+TGG - chr1_3:39029173-39029192 Msa0117650:intron 35.0%
CCTAATATGGCTAACTACAT+GGG - chr1_3:39029174-39029193 Msa0117650:intron 35.0%
TCTCACAAAACTTTCAAGAG+TGG + chr1_3:39029229-39029248 None:intergenic 35.0%
!! TCTTGAAAGTTTTGTGAGAC+AGG - chr1_3:39029230-39029249 Msa0117650:intron 35.0%
CCCTTACTTAATCACTAAGT+TGG - chr1_3:39029434-39029453 Msa0117650:intron 35.0%
CCCAACTTAGTGATTAAGTA+AGG + chr1_3:39029438-39029457 None:intergenic 35.0%
TTCCTTCAATCATATGGGTA+GGG - chr1_3:39029742-39029761 Msa0117650:intron 35.0%
GTAGTTTATAATGTGAGGGT+TGG + chr1_3:39029777-39029796 None:intergenic 35.0%
TTACATAGAATCTACGAACC+TGG - chr1_3:39029830-39029849 Msa0117650:intron 35.0%
GGAGTCACATTATAAAATCC+AGG + chr1_3:39029851-39029870 None:intergenic 35.0%
CAATATAAGGACAAGTTGCA+CGG - chr1_3:39030287-39030306 Msa0117650:CDS 35.0%
ATCATAAACACGTGAGACTA+TGG - chr1_3:39030426-39030445 Msa0117650:intron 35.0%
AAAAGCAACAAGTTATGGTG+AGG + chr1_3:39030561-39030580 None:intergenic 35.0%
TATGAAGTGAGTGTGTGAAT+TGG + chr1_3:39030815-39030834 None:intergenic 35.0%
CACACTCACTTCATACTATT+TGG - chr1_3:39030820-39030839 Msa0117650:intron 35.0%
!! CTTGTGGTTTGTTAAGTCAT+TGG + chr1_3:39030846-39030865 None:intergenic 35.0%
GGTTCAGTAAAATGCTGTTA+TGG + chr1_3:39030913-39030932 None:intergenic 35.0%
GCATAATATATGCAAGGTTC+GGG - chr1_3:39031033-39031052 Msa0117650:intron 35.0%
CATAATATATGCAAGGTTCG+GGG - chr1_3:39031034-39031053 Msa0117650:intron 35.0%
!!! TTTTTTTTTTGTGGTGGCAG+GGG + chr1_3:39031069-39031088 None:intergenic 35.0%
! GACTAAAGTGTTACCTTTGT+TGG - chr1_3:39031318-39031337 Msa0117650:intron 35.0%
!! CTTATATGTATCGGTTGTCA+GGG + chr1_3:39031360-39031379 None:intergenic 35.0%
!! ACTTATATGTATCGGTTGTC+AGG + chr1_3:39031361-39031380 None:intergenic 35.0%
TAGTTACGTCTCGATAGAAT+CGG - chr1_3:39031470-39031489 Msa0117650:CDS 35.0%
TCAAATTATGGAGTGGTTGT+GGG + chr1_3:39031659-39031678 None:intergenic 35.0%
ATCAAATTATGGAGTGGTTG+TGG + chr1_3:39031660-39031679 None:intergenic 35.0%
! CAACTTGGTCAATTTTGCTA+CGG + chr1_3:39031874-39031893 None:intergenic 35.0%
GCATATTGAAAAAGTTGCAC+AGG + chr1_3:39032265-39032284 None:intergenic 35.0%
!!! GTCTTCTTTTTTTTTGGTGG+TGG - chr1_3:39032477-39032496 Msa0117650:CDS 35.0%
TGCATAAAATATGCAAGGTC+CGG + chr1_3:39032517-39032536 None:intergenic 35.0%
TGATGGTCATGCATATGATG+AGG + chr1_3:39025151-39025170 None:intergenic 40.0%
!!! CTGTCTGAGGGTTTGTTTTT+TGG - chr1_3:39025706-39025725 Msa0117650:intron 40.0%
GTCATGACCTCCTTAGAAAA+AGG - chr1_3:39025942-39025961 Msa0117650:intron 40.0%
ATGACCTCCTTAGAAAAAGG+TGG - chr1_3:39025945-39025964 Msa0117650:intron 40.0%
!! CATACCACCTTTTTCTAAGG+AGG + chr1_3:39025952-39025971 None:intergenic 40.0%
ACAGAGAACTCATCATCATC+AGG - chr1_3:39026166-39026185 Msa0117650:intron 40.0%
GGGAAAATGTTAAGAGTTGG+TGG + chr1_3:39026202-39026221 None:intergenic 40.0%
!! CTACATGCATTGGTTGAGAT+GGG + chr1_3:39026222-39026241 None:intergenic 40.0%
ACCACCACCATCTAATTCAA+AGG - chr1_3:39026243-39026262 Msa0117650:intron 40.0%
! ACCTTTGAATTAGATGGTGG+TGG + chr1_3:39026247-39026266 None:intergenic 40.0%
! CAGAAGGGTTTTCATTTCGT+TGG + chr1_3:39026516-39026535 None:intergenic 40.0%
GCAGAAAGAGAATAATCGCA+AGG - chr1_3:39026678-39026697 Msa0117650:intron 40.0%
ACCAAAAACACCAGATCCTA+AGG - chr1_3:39026729-39026748 Msa0117650:intron 40.0%
! ACCTTAGGATCTGGTGTTTT+TGG + chr1_3:39026733-39026752 None:intergenic 40.0%
! AAGACTTGCTCAGAATAGAG+AGG - chr1_3:39026837-39026856 Msa0117650:intron 40.0%
TTCAGCAGCTAGAAACAAGT+AGG - chr1_3:39027021-39027040 Msa0117650:intron 40.0%
GTCCTTTGCTCTACAATTGT+TGG + chr1_3:39027398-39027417 None:intergenic 40.0%
TGGAAAGATACCTGAGCTAA+TGG + chr1_3:39027514-39027533 None:intergenic 40.0%
GCAATGTTTGATGTGGAGTA+TGG - chr1_3:39027633-39027652 Msa0117650:intron 40.0%
CAGACCATCTGAACTCATTA+AGG - chr1_3:39027878-39027897 Msa0117650:intron 40.0%
TTTAAATTGCCGTTACGGTC+AGG - chr1_3:39027950-39027969 Msa0117650:intron 40.0%
TTAAATTGCCGTTACGGTCA+GGG - chr1_3:39027951-39027970 Msa0117650:intron 40.0%
! ATTTGGACCCCAACATTTTG+AGG + chr1_3:39028016-39028035 None:intergenic 40.0%
TTAGGGGGAAAATTGGGTAT+TGG + chr1_3:39028585-39028604 None:intergenic 40.0%
GGTCAATTAGGGGGAAAATT+GGG + chr1_3:39028591-39028610 None:intergenic 40.0%
TGGTCAATTAGGGGGAAAAT+TGG + chr1_3:39028592-39028611 None:intergenic 40.0%
CGAGTTTATGGTCAATTAGG+GGG + chr1_3:39028600-39028619 None:intergenic 40.0%
ACCCGCATATACCAAGTATT+TGG + chr1_3:39029050-39029069 None:intergenic 40.0%
GTTGCAACAATCAACACAAG+AGG - chr1_3:39029068-39029087 Msa0117650:intron 40.0%
CCCATGTAGTTAGCCATATT+AGG + chr1_3:39029177-39029196 None:intergenic 40.0%
TAAGTCCATAACTGATCTCG+TGG - chr1_3:39029695-39029714 Msa0117650:intron 40.0%
AAGTCCATAACTGATCTCGT+GGG - chr1_3:39029696-39029715 Msa0117650:intron 40.0%
GTTCCTTCAATCATATGGGT+AGG - chr1_3:39029741-39029760 Msa0117650:intron 40.0%
TATAATGTGAGGGTTGGAGT+TGG + chr1_3:39029771-39029790 None:intergenic 40.0%
ATGCATTCCTCACTCTCATA+AGG - chr1_3:39029804-39029823 Msa0117650:intron 40.0%
GTAACAACCTTATGAGAGTG+AGG + chr1_3:39029814-39029833 None:intergenic 40.0%
AAGATATGCACAGCTAGAGA+GGG - chr1_3:39029960-39029979 Msa0117650:intron 40.0%
CGTGCAACTTGTCCTTATAT+TGG + chr1_3:39030289-39030308 None:intergenic 40.0%
GAGACTATGGTAGATTAGTG+TGG - chr1_3:39030439-39030458 Msa0117650:intron 40.0%
CCATGACATCACACAGATAT+GGG + chr1_3:39030505-39030524 None:intergenic 40.0%
ACCATGACATCACACAGATA+TGG + chr1_3:39030506-39030525 None:intergenic 40.0%
!! AACTCAAACACGTTTTGGGT+TGG - chr1_3:39030593-39030612 Msa0117650:intron 40.0%
ATAAGTCCAATTCATGCGAC+TGG - chr1_3:39031375-39031394 Msa0117650:intron 40.0%
AGTTACGTCTCGATAGAATC+GGG - chr1_3:39031471-39031490 Msa0117650:CDS 40.0%
ACTTACAGACAAGTGTAGCT+CGG + chr1_3:39031792-39031811 None:intergenic 40.0%
!!! TCTTTTTTTTTGGTGGTGGC+CGG - chr1_3:39032481-39032500 Msa0117650:CDS 40.0%
CAAGTAGTTGCTAGGCATAG+AGG + chr1_3:39025209-39025228 None:intergenic 45.0%
!! GCTACATGCATTGGTTGAGA+TGG + chr1_3:39026223-39026242 None:intergenic 45.0%
!!! GGACGGTTGAGATGGTTTTT+TGG + chr1_3:39026479-39026498 None:intergenic 45.0%
AAAACCATCTCAACCGTCCA+TGG - chr1_3:39026480-39026499 Msa0117650:intron 45.0%
!! TTGACAGGTTTTAGTGGTGC+AGG + chr1_3:39026541-39026560 None:intergenic 45.0%
TGCACCACTAAAACCTGTCA+AGG - chr1_3:39026540-39026559 Msa0117650:intron 45.0%
!! CCTACCTTGACAGGTTTTAG+TGG + chr1_3:39026547-39026566 None:intergenic 45.0%
CCACTAAAACCTGTCAAGGT+AGG - chr1_3:39026544-39026563 Msa0117650:intron 45.0%
CAGCAAGAAAAAGCAGGCTT+AGG - chr1_3:39026860-39026879 Msa0117650:intron 45.0%
!!! TTTTAGGGCGTGTTAATGGG+AGG - chr1_3:39027441-39027460 Msa0117650:intron 45.0%
AGAGGCTGCAATGTTTGATG+TGG - chr1_3:39027626-39027645 Msa0117650:intron 45.0%
TGTTTGATGTGGAGTATGGG+AGG - chr1_3:39027637-39027656 Msa0117650:intron 45.0%
ACATGAAGCAACGTTCAGCT+GGG + chr1_3:39027845-39027864 None:intergenic 45.0%
GAACGTTGCTTCATGTGGAT+TGG - chr1_3:39027849-39027868 Msa0117650:intron 45.0%
!! AGTATTTGGTGCTCCGTAAG+AGG + chr1_3:39029036-39029055 None:intergenic 45.0%
! CTTACGGAGCACCAAATACT+TGG - chr1_3:39029036-39029055 Msa0117650:intron 45.0%
ATCAACACAAGAGGCAGAAG+AGG - chr1_3:39029077-39029096 Msa0117650:intron 45.0%
GGCTAACTACATGGGACAAA+TGG - chr1_3:39029182-39029201 Msa0117650:intron 45.0%
! AAGAGTGGAGAGCTTGTTCA+TGG + chr1_3:39029214-39029233 None:intergenic 45.0%
AGTCCATAACTGATCTCGTG+GGG - chr1_3:39029697-39029716 Msa0117650:intron 45.0%
GTCCCTACCCATATGATTGA+AGG + chr1_3:39029747-39029766 None:intergenic 45.0%
CAAGATATGCACAGCTAGAG+AGG - chr1_3:39029959-39029978 Msa0117650:intron 45.0%
AGATATGCACAGCTAGAGAG+GGG - chr1_3:39029961-39029980 Msa0117650:intron 45.0%
CCCATATCTGTGTGATGTCA+TGG - chr1_3:39030502-39030521 Msa0117650:CDS 45.0%
TATGTGTTTGGTCGGTCTTG+TGG + chr1_3:39030862-39030881 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG - chr1_3:39031005-39031024 Msa0117650:intron 45.0%
CTTAAGGGTAAGGCCAACAA+AGG + chr1_3:39031334-39031353 None:intergenic 45.0%
!! TTGTTGGCCTTACCCTTAAG+CGG - chr1_3:39031334-39031353 Msa0117650:intron 45.0%
TCTGAACCAGTCGCATGAAT+TGG + chr1_3:39031384-39031403 None:intergenic 45.0%
CGTAACTAACTCTCGTTGGA+GGG + chr1_3:39031458-39031477 None:intergenic 45.0%
ACGTAACTAACTCTCGTTGG+AGG + chr1_3:39031459-39031478 None:intergenic 45.0%
GAGACGTAACTAACTCTCGT+TGG + chr1_3:39031462-39031481 None:intergenic 45.0%
GTTACGTCTCGATAGAATCG+GGG - chr1_3:39031472-39031491 Msa0117650:CDS 45.0%
TCTCGATAGAATCGGGGATT+AGG - chr1_3:39031478-39031497 Msa0117650:CDS 45.0%
! AGGAATCGAGGAGGGAATTT+TGG - chr1_3:39031498-39031517 Msa0117650:CDS 45.0%
! GGAATCGAGGAGGGAATTTT+GGG - chr1_3:39031499-39031518 Msa0117650:CDS 45.0%
! GAATCGAGGAGGGAATTTTG+GGG - chr1_3:39031500-39031519 Msa0117650:CDS 45.0%
! AATCGAGGAGGGAATTTTGG+GGG - chr1_3:39031501-39031520 Msa0117650:CDS 45.0%
ATTATGGAGTGGTTGTGGGT+TGG + chr1_3:39031655-39031674 None:intergenic 45.0%
! CTTGGTCAATTTTGCTACGG+TGG + chr1_3:39031871-39031890 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG + chr1_3:39031005-39031024 None:intergenic 45.0%
GATGCAGACGATGAACTGTT+TGG + chr1_3:39032893-39032912 None:intergenic 45.0%
TCGTCAAGCTGCAAGATGTT+TGG - chr1_3:39032926-39032945 Msa0117650:CDS 45.0%
!! TTCGAGCATTGAGTTCTCTC+TGG - chr1_3:39032976-39032995 Msa0117650:CDS 45.0%
!! TTAAAATGATAAAATAAAAT+TGG + chr1_3:39025370-39025389 None:intergenic 5.0%
!! AAAATTAATAAAATCAAAAT+TGG + chr1_3:39025875-39025894 None:intergenic 5.0%
!!! ATTTTTATATATTTCATTTT+AGG - chr1_3:39027336-39027355 Msa0117650:intron 5.0%
!!! TTTTTATATATTTCATTTTA+GGG - chr1_3:39027337-39027356 Msa0117650:intron 5.0%
!!! TAATAAAATCAAATTTTTTT+TGG - chr1_3:39027539-39027558 Msa0117650:intron 5.0%
!!! TATAATTTTACAAAATATTA+AGG - chr1_3:39029471-39029490 Msa0117650:intron 5.0%
!!! CTTAAAATTTAAAATATAAA+TGG + chr1_3:39029995-39030014 None:intergenic 5.0%
!!! AATTTAATTTTTTTTTTTTG+TGG + chr1_3:39031078-39031097 None:intergenic 5.0%
CTAAGGAGGTCATGACACCA+AGG + chr1_3:39025938-39025957 None:intergenic 50.0%
!! GGAGCCACTTGTTATTGGAG+AGG + chr1_3:39026458-39026477 None:intergenic 50.0%
AACTCCATGGACGGTTGAGA+TGG + chr1_3:39026487-39026506 None:intergenic 50.0%
ATCTCAACCGTCCATGGAGT+TGG - chr1_3:39026486-39026505 Msa0117650:intron 50.0%
! TGGTTTGCCAACTCCATGGA+CGG + chr1_3:39026496-39026515 None:intergenic 50.0%
!! TCGTTGGTTTGCCAACTCCA+TGG + chr1_3:39026500-39026519 None:intergenic 50.0%
TTAGTGGTGCAGGTGCAGAA+GGG + chr1_3:39026531-39026550 None:intergenic 50.0%
TTTAGTGGTGCAGGTGCAGA+AGG + chr1_3:39026532-39026551 None:intergenic 50.0%
GAGAGGCAGCAAGAAAAAGC+AGG - chr1_3:39026854-39026873 Msa0117650:intron 50.0%
GGTGCAGTGAATTCCCTTAC+AGG - chr1_3:39026888-39026907 Msa0117650:intron 50.0%
AGCGTGCTAGAGCTCAAGTA+AGG - chr1_3:39027075-39027094 Msa0117650:intron 50.0%
!! AGACTGGTACCGATTCTCTG+TGG - chr1_3:39027147-39027166 Msa0117650:intron 50.0%
GTGCAGTCACCACAGAGAAT+CGG + chr1_3:39027159-39027178 None:intergenic 50.0%
CGACTCTGCAGCAGATTGTA+CGG + chr1_3:39027181-39027200 None:intergenic 50.0%
!! AATGGGAGGAGGTGCACTTT+TGG - chr1_3:39027455-39027474 Msa0117650:intron 50.0%
!! ATGGGAGGAGGTGCACTTTT+GGG - chr1_3:39027456-39027475 Msa0117650:intron 50.0%
TTGATGTGGAGTATGGGAGG+TGG - chr1_3:39027640-39027659 Msa0117650:intron 50.0%
CATGAAGCAACGTTCAGCTG+GGG + chr1_3:39027844-39027863 None:intergenic 50.0%
CACATGAAGCAACGTTCAGC+TGG + chr1_3:39027846-39027865 None:intergenic 50.0%
CAGCTGAACGTTGCTTCATG+TGG - chr1_3:39027844-39027863 Msa0117650:intron 50.0%
!! CGTTGCTTCATGTGGATTGG+TGG - chr1_3:39027852-39027871 Msa0117650:intron 50.0%
!! CAGAAGAGGCACTTTCCCAA+GGG - chr1_3:39029091-39029110 Msa0117650:intron 50.0%
GTTGAGTGCATCAAGCCCTT+GGG + chr1_3:39029109-39029128 None:intergenic 50.0%
GATCCCCACGAGATCAGTTA+TGG + chr1_3:39029703-39029722 None:intergenic 50.0%
TAACTGATCTCGTGGGGATC+AGG - chr1_3:39029703-39029722 Msa0117650:intron 50.0%
CTAACTCTCGTTGGAGGGTT+AGG + chr1_3:39031453-39031472 None:intergenic 50.0%
GAATCGGGGATTAGGAATCG+AGG - chr1_3:39031486-39031505 Msa0117650:CDS 50.0%
CAGACAAGTGTAGCTCGGTA+TGG + chr1_3:39031787-39031806 None:intergenic 50.0%
CACTGCAGGCAGATAATCTG+AGG - chr1_3:39032865-39032884 Msa0117650:CDS 50.0%
!! GGTGGTGGTGCTACATGCAT+TGG + chr1_3:39026232-39026251 None:intergenic 55.0%
TAGGGCGTGTTAATGGGAGG+AGG - chr1_3:39027444-39027463 Msa0117650:intron 55.0%
!! GCACTTTTGGGAGGAGACCA+AGG - chr1_3:39027468-39027487 Msa0117650:intron 55.0%
GGAGTATGGGAGGTGGTTAG+AGG - chr1_3:39027647-39027666 Msa0117650:intron 55.0%
!! GGTGGTTAGAGGAGCATCAC+AGG - chr1_3:39027658-39027677 Msa0117650:intron 55.0%
ATTGCCGTTACGGTCAGGGT+CGG - chr1_3:39027955-39027974 Msa0117650:intron 55.0%
GCACACCTTGCACACCCATT+GGG + chr1_3:39027981-39028000 None:intergenic 55.0%
!!! CAACATTTTGAGGCCCTGGG+CGG + chr1_3:39028006-39028025 None:intergenic 55.0%
GCCCAGGGCCTCAAAATGTT+GGG - chr1_3:39028005-39028024 Msa0117650:intron 55.0%
!!! CCCCAACATTTTGAGGCCCT+GGG + chr1_3:39028009-39028028 None:intergenic 55.0%
CCCAGGGCCTCAAAATGTTG+GGG - chr1_3:39028006-39028025 Msa0117650:intron 55.0%
!!! ACCCCAACATTTTGAGGCCC+TGG + chr1_3:39028010-39028029 None:intergenic 55.0%
!! GCAGAAGAGGCACTTTCCCA+AGG - chr1_3:39029090-39029109 Msa0117650:intron 55.0%
GGTTGAGTGCATCAAGCCCT+TGG + chr1_3:39029110-39029129 None:intergenic 55.0%
TGATCTCGTGGGGATCAGGT+AGG - chr1_3:39029707-39029726 Msa0117650:intron 55.0%
CCAACTGAGCTAAGCTCACG+AGG + chr1_3:39032546-39032565 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - chr1_3:39031000-39031019 Msa0117650:intron 55.0%
GTTGGAGGGTTAGGTCCTGA+TGG + chr1_3:39031444-39031463 None:intergenic 55.0%
TCGGGGATTAGGAATCGAGG+AGG - chr1_3:39031489-39031508 Msa0117650:CDS 55.0%
CGGGGATTAGGAATCGAGGA+GGG - chr1_3:39031490-39031509 Msa0117650:CDS 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG + chr1_3:39031000-39031019 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG - chr1_3:39032546-39032565 Msa0117650:intron 55.0%
CTGAGCTAAGCTCACGAGGA+CGG - chr1_3:39032550-39032569 Msa0117650:intron 55.0%
!! GGAGGAGGTGCACTTTTGGG+AGG - chr1_3:39027459-39027478 Msa0117650:intron 60.0%
GGCACACCTTGCACACCCAT+TGG + chr1_3:39027982-39028001 None:intergenic 60.0%
CGCCCAGGGCCTCAAAATGT+TGG - chr1_3:39028004-39028023 Msa0117650:intron 60.0%
GTCAGGGCCGCTTAAGGGTA+AGG + chr1_3:39031344-39031363 None:intergenic 60.0%
CGGTTGTCAGGGCCGCTTAA+GGG + chr1_3:39031349-39031368 None:intergenic 60.0%
TCGGTTGTCAGGGCCGCTTA+AGG + chr1_3:39031350-39031369 None:intergenic 60.0%
AAGGTCCGGTGTTCGAACGC+CGG + chr1_3:39032503-39032522 None:intergenic 60.0%
TGGGCCGACCCTGACCGTAA+CGG + chr1_3:39027962-39027981 None:intergenic 65.0%
TACGGTCAGGGTCGGCCCAA+TGG - chr1_3:39027963-39027982 Msa0117650:intron 65.0%
ACGGTCAGGGTCGGCCCAAT+GGG - chr1_3:39027964-39027983 Msa0117650:intron 65.0%
GTCGGCCCAATGGGTGTGCA+AGG - chr1_3:39027973-39027992 Msa0117650:intron 65.0%
!!! CATTTTGAGGCCCTGGGCGG+TGG + chr1_3:39028003-39028022 None:intergenic 65.0%
TGCAAGGTGTGCCACCGCCC+AGG - chr1_3:39027989-39028008 Msa0117650:intron 70.0%
GCAAGGTGTGCCACCGCCCA+GGG - chr1_3:39027990-39028009 Msa0117650:intron 70.0%
GGTGGCCGGCGTTCGAACAC+CGG - chr1_3:39032495-39032514 Msa0117650:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 39024950 39033022 39024950 ID=Msa0117650;Name=Msa0117650
chr1_3 mRNA 39024950 39033022 39024950 ID=Msa0117650-mRNA-1;Parent=Msa0117650;Name=Msa0117650-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0|0|1|1|1|11|0|515
chr1_3 exon 39032745 39033022 39032745 ID=Msa0117650-mRNA-1:exon:12121;Parent=Msa0117650-mRNA-1
chr1_3 exon 39032416 39032522 39032416 ID=Msa0117650-mRNA-1:exon:12120;Parent=Msa0117650-mRNA-1
chr1_3 exon 39031708 39031802 39031708 ID=Msa0117650-mRNA-1:exon:12119;Parent=Msa0117650-mRNA-1
chr1_3 exon 39031411 39031533 39031411 ID=Msa0117650-mRNA-1:exon:12118;Parent=Msa0117650-mRNA-1
chr1_3 exon 39031222 39031290 39031222 ID=Msa0117650-mRNA-1:exon:12117;Parent=Msa0117650-mRNA-1
chr1_3 exon 39031084 39031143 39031084 ID=Msa0117650-mRNA-1:exon:12116;Parent=Msa0117650-mRNA-1
chr1_3 exon 39030881 39030958 39030881 ID=Msa0117650-mRNA-1:exon:12115;Parent=Msa0117650-mRNA-1
chr1_3 exon 39030450 39030525 39030450 ID=Msa0117650-mRNA-1:exon:12114;Parent=Msa0117650-mRNA-1
chr1_3 exon 39030073 39030344 39030073 ID=Msa0117650-mRNA-1:exon:12113;Parent=Msa0117650-mRNA-1
chr1_3 exon 39028721 39028960 39028721 ID=Msa0117650-mRNA-1:exon:12112;Parent=Msa0117650-mRNA-1
chr1_3 exon 39024950 39025099 39024950 ID=Msa0117650-mRNA-1:exon:12111;Parent=Msa0117650-mRNA-1
chr1_3 CDS 39032745 39033022 39032745 ID=Msa0117650-mRNA-1:cds;Parent=Msa0117650-mRNA-1
chr1_3 CDS 39032416 39032522 39032416 ID=Msa0117650-mRNA-1:cds;Parent=Msa0117650-mRNA-1
chr1_3 CDS 39031708 39031802 39031708 ID=Msa0117650-mRNA-1:cds;Parent=Msa0117650-mRNA-1
chr1_3 CDS 39031411 39031533 39031411 ID=Msa0117650-mRNA-1:cds;Parent=Msa0117650-mRNA-1
chr1_3 CDS 39031222 39031290 39031222 ID=Msa0117650-mRNA-1:cds;Parent=Msa0117650-mRNA-1
chr1_3 CDS 39031084 39031143 39031084 ID=Msa0117650-mRNA-1:cds;Parent=Msa0117650-mRNA-1
chr1_3 CDS 39030881 39030958 39030881 ID=Msa0117650-mRNA-1:cds;Parent=Msa0117650-mRNA-1
chr1_3 CDS 39030450 39030525 39030450 ID=Msa0117650-mRNA-1:cds;Parent=Msa0117650-mRNA-1
chr1_3 CDS 39030073 39030344 39030073 ID=Msa0117650-mRNA-1:cds;Parent=Msa0117650-mRNA-1
chr1_3 CDS 39028721 39028960 39028721 ID=Msa0117650-mRNA-1:cds;Parent=Msa0117650-mRNA-1
chr1_3 CDS 39024950 39025099 39024950 ID=Msa0117650-mRNA-1:cds;Parent=Msa0117650-mRNA-1
Gene Sequence

>Msa0117650

ATGGGGTTTTCTTTGGCTTTTGAAGAAGCTGAACAACAAGACCAAGTAGATGCAAGTTTTTTAGGTACCAATAATAACAATTCTATGCTCATGGCTTCCAAAAACTCACATGAATCTCAACATGAATCTCTTCAACAACAACAACAAAACCATCAAAATCTTCTTCATCATCACCAACAACAACAGAATCAACATCATCCTCATCATATGCATGACCATCAAATTTCTTTTGGAATGATGCCATCTTCATCTTCATCCTCTATGCCTAGCAACTACTTAAGCAAAGATTCAAGTGCTTATGATTTAGGTGAATTGGATCAAGCATTTTTTTTGTATCTGGATGGACAAGCACAAGCTGATCCCTCTAGTGTTCAAGATCAAAGACAGAACTCATCATCATCAGGAATGAAGCCACCACCAACTCTTAACATTTTCCCATCTCAACCAATGCATGTAGCACCACCACCATCTAATTCAAAGGTTAGCATGGGATTAACCTCTCCAATAACAAGTGGCTCCAAAAAACCATCTCAACCGTCCATGGAGTTGGCAAACCAACGAAATGAAAACCCTTCTGCACCTGCACCACTAAAACCTGTCAAGAAAGAGAATAATCGCAAGGCTACAACTTCAAGTTCTGAACATGAAGGACCAAAAACACCAGATCCTAAGACTCTGAGAAGACTTGCTCAGAATAGAGAGGCAGCAAGAAAAAGCAGGCTTAGGAAAAAGGCTTATGTTCAGCAGCTAGAAACAAGTAGGATTAAGCTTAATCAGCTTGAACAAGAGTTACAGCGTGCTAGAGCTCAAGGCGTGTTAATGGGAGGAGGTGCACTTTTGGGAGGAGACCAAGGAATTCCAATTTCTATGAATACCATTAGCTCAGAGGCTGCAATGTTTGATGTGGAGTATGGGAGGTGGTTAGAGGAGCATCACAGGCTAGTGTGTGAGCTAAGAGCAGCAGTAGATGAACACTTGCATGAAAATGAGCTTAGGTTATATGTGGAAAATTGTTTGGCTCACTATGATCAAGTAATTAACCTCAAAAATATTCTAGCTAGAACAGATGTGTTCCATCTTGTTTTTGGAATGTGGAAAACCCCAGCTGAACGTTGCTTCATGTGGATTGGTGGATTCAGACCATCTGAACTCATTAAGATAATTGTAAGTCAAATTGAGCCTCTTACGGAGCACCAAATACTTGGTATATGCGGGTTGCAACAATCAACACAAGAGGCAGAAGAGGCACTTTCCCAAGGGCTTGATGCACTCAACCAATCTCTTTCAGAGACTATAACATCAGACTCTTTAAGCAATCCTCCTAATATGGCTAACTACATGGGACAAATGGCTCTTGCCATGAACAAGCTCTCCACTCTTGAAAGTTTTGTGAGACAGGCAGATAATCTGAGGCACCAAACAGTTCATCGTCTGCATCAGTTGTTAACAGTTCGTCAAGCTGCAAGATGTTTGGTTGCAATGTCTGAGTATTTTCATCGTCTTCGAGCATTGAGTTCTCTCTGGTTGACCCGTCCTCGCCAAGAATAG
Protein sequence

>Msa0117650

MGFSLAFEEAEQQDQVDASFLGTNNNNSMLMASKNSHESQHESLQQQQQNHQNLLHHHQQQQNQHHPHHMHDHQISFGMMPSSSSSSMPSNYLSKDSSAYDLGELDQAFFLYLDGQAQADPSSVQDQRQNSSSSGMKPPPTLNIFPSQPMHVAPPPSNSKVSMGLTSPITSGSKKPSQPSMELANQRNENPSAPAPLKPVKKENNRKATTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLNQLEQELQRARAQGVLMGGGALLGGDQGIPISMNTISSEAAMFDVEYGRWLEEHHRLVCELRAAVDEHLHENELRLYVENCLAHYDQVINLKNILARTDVFHLVFGMWKTPAERCFMWIGGFRPSELIKIIVSQIEPLTEHQILGICGLQQSTQEAEEALSQGLDALNQSLSETITSDSLSNPPNMANYMGQMALAMNKLSTLESFVRQADNLRHQTVHRLHQLLTVRQAARCLVAMSEYFHRLRALSSLWLTRPRQE*