AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0553540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0553540 MtrunA17_Chr4g0039261 97.126 661 18 1 1 660 29 689 0.0 1333
Msa0553540 MtrunA17_Chr4g0039251 67.727 660 211 2 3 660 73 732 0.0 935
Msa0553540 MtrunA17_Chr4g0039231 59.877 648 209 2 64 660 1 648 0.0 823
Msa0553540 MtrunA17_Chr6g0477811 54.487 624 282 2 2 625 46 667 0.0 706
Msa0553540 MtrunA17_Chr4g0050251 47.164 617 310 4 3 614 53 658 0.0 593
Msa0553540 MtrunA17_Chr4g0050261 45.622 651 317 5 3 617 53 702 0.0 587
Msa0553540 MtrunA17_Chr4g0050291 45.899 634 320 7 3 624 28 650 0.0 573
Msa0553540 MtrunA17_Chr4g0050221 42.720 625 335 8 3 621 13 620 5.96e-176 515
Msa0553540 MtrunA17_Chr4g0026731 44.128 596 294 7 56 623 12 596 9.43e-175 511
Msa0553540 MtrunA17_Chr4g0050201 40.072 554 309 7 65 612 4 540 1.34e-143 429
Msa0553540 MtrunA17_Chr2g0327241 36.258 604 372 9 3 604 107 699 3.26e-121 377
Msa0553540 MtrunA17_Chr1g0208391 33.214 560 343 12 5 555 75 612 1.24e-85 283
Msa0553540 MtrunA17_Chr1g0176451 30.726 537 344 10 10 536 10 528 5.00e-76 254
Msa0553540 MtrunA17_Chr7g0263351 30.442 565 362 9 6 559 114 658 4.36e-74 253
Msa0553540 MtrunA17_Chr1g0176441 30.000 550 358 11 1 536 147 683 2.58e-73 251
Msa0553540 MtrunA17_Chr1g0213091 30.769 533 352 5 19 536 118 648 8.04e-73 249
Msa0553540 MtrunA17_Chr7g0267971 29.516 620 393 14 1 605 136 726 1.62e-72 248
Msa0553540 MtrunA17_Chr5g0408061 30.478 607 374 15 17 605 59 635 2.12e-72 246
Msa0553540 MtrunA17_Chr1g0200651 35.683 454 251 10 21 457 88 517 6.98e-71 243
Msa0553540 MtrunA17_Chr1g0198931 29.934 608 369 18 20 605 104 676 1.33e-69 239
Msa0553540 MtrunA17_Chr8g0359931 30.989 526 318 13 21 536 64 554 1.29e-65 228
Msa0553540 MtrunA17_Chr5g0446901 31.538 520 320 9 17 519 103 603 1.94e-65 226
Msa0553540 MtrunA17_Chr8g0384391 29.752 605 395 11 16 607 49 636 1.02e-64 225
Msa0553540 MtrunA17_Chr3g0102731 34.690 516 295 16 22 519 97 588 5.24e-64 222
Msa0553540 MtrunA17_Chr2g0316301 30.653 597 363 15 20 604 70 627 1.11e-63 222
Msa0553540 MtrunA17_Chr2g0318061 34.225 374 204 8 21 382 29 372 6.80e-62 211
Msa0553540 MtrunA17_Chr3g0130331 28.571 602 400 14 18 607 53 636 9.86e-61 214
Msa0553540 MtrunA17_Chr7g0264441 45.455 242 128 3 18 256 274 514 2.27e-56 206
Msa0553540 MtrunA17_Chr1g0202431 26.858 592 383 12 23 604 50 601 4.81e-55 198
Msa0553540 MtrunA17_Chr2g0331081 28.598 535 336 12 22 537 890 1397 4.47e-54 201
Msa0553540 MtrunA17_Chr2g0331081 27.150 593 317 18 15 533 167 718 8.41e-45 172
Msa0553540 MtrunA17_Chr7g0262241 28.171 607 384 15 23 613 880 1450 7.46e-54 200
Msa0553540 MtrunA17_Chr7g0262241 25.532 611 392 14 23 590 162 752 2.36e-46 177
Msa0553540 MtrunA17_Chr1g0180971 42.085 259 142 4 1 256 395 648 1.05e-53 197
Msa0553540 MtrunA17_Chr8g0340651 29.554 538 327 13 22 537 904 1411 3.15e-53 198
Msa0553540 MtrunA17_Chr8g0340651 34.576 295 154 6 8 264 159 452 3.53e-42 164
Msa0553540 MtrunA17_Chr1g0199471 39.382 259 149 4 1 256 499 752 9.40e-53 196
Msa0553540 MtrunA17_Chr4g0003981 29.081 533 334 14 23 537 866 1372 4.79e-52 194
Msa0553540 MtrunA17_Chr4g0003981 26.214 618 399 15 23 600 173 773 1.32e-43 169
Msa0553540 MtrunA17_Chr4g0003971 27.949 551 349 12 23 553 825 1347 2.76e-51 192
Msa0553540 MtrunA17_Chr4g0003971 26.282 624 399 16 23 604 161 765 7.99e-42 163
Msa0553540 MtrunA17_Chr7g0262221 28.314 611 379 17 23 607 854 1431 2.86e-51 192
Msa0553540 MtrunA17_Chr7g0262221 27.079 517 336 12 23 515 163 662 1.25e-45 175
Msa0553540 MtrunA17_Chr7g0261971 27.348 607 389 15 23 613 875 1445 5.37e-51 191
Msa0553540 MtrunA17_Chr7g0261971 25.378 595 377 14 23 572 158 730 8.31e-46 176
Msa0553540 MtrunA17_Chr7g0261951 26.809 608 391 14 23 613 879 1449 9.09e-51 191
Msa0553540 MtrunA17_Chr7g0261951 26.923 598 364 17 23 572 162 734 1.40e-46 178
Msa0553540 MtrunA17_Chr4g0065231 25.418 598 406 13 19 607 71 637 1.36e-50 186
Msa0553540 MtrunA17_Chr8g0393191 42.105 247 139 3 23 267 69 313 1.89e-50 188
Msa0553540 MtrunA17_Chr8g0393191 25.256 293 191 8 335 605 523 809 8.16e-18 87.8
Msa0553540 MtrunA17_Chr3g0138261 27.603 605 374 17 22 603 869 1432 2.03e-50 189
Msa0553540 MtrunA17_Chr3g0138261 27.880 599 357 17 23 572 166 738 3.32e-46 177
Msa0553540 MtrunA17_Chr1g0148841 28.233 549 351 14 7 537 860 1383 1.67e-49 187
Msa0553540 MtrunA17_Chr1g0148841 27.520 625 392 15 23 605 166 771 2.61e-46 177
Msa0553540 MtrunA17_Chr7g0262261 26.892 621 408 16 23 624 803 1396 2.95e-49 186
Msa0553540 MtrunA17_Chr7g0262261 26.589 598 366 19 23 572 133 705 3.51e-45 174
Msa0553540 MtrunA17_Chr7g0262251 28.417 556 328 15 23 543 827 1347 5.71e-49 185
Msa0553540 MtrunA17_Chr7g0262251 26.702 573 379 15 23 572 175 729 8.62e-46 176
Msa0553540 MtrunA17_Chr2g0332241 28.624 545 321 16 23 537 856 1362 1.13e-48 184
Msa0553540 MtrunA17_Chr2g0332241 26.562 576 352 16 23 551 167 718 1.23e-45 175
Msa0553540 MtrunA17_Chr4g0028621 39.502 281 158 5 1 278 489 760 1.85e-48 183
Msa0553540 MtrunA17_Chr2g0332221 28.624 545 321 16 23 537 855 1361 3.64e-48 182
Msa0553540 MtrunA17_Chr2g0332221 26.516 577 351 18 23 551 167 718 1.42e-44 172
Msa0553540 MtrunA17_Chr2g0332211 28.752 553 310 15 23 537 939 1445 7.14e-48 182
Msa0553540 MtrunA17_Chr2g0332211 27.402 562 340 16 23 537 248 788 1.57e-45 175
Msa0553540 MtrunA17_Chr7g0262231 27.425 536 345 12 23 543 883 1389 1.30e-47 181
Msa0553540 MtrunA17_Chr7g0262231 25.466 644 410 16 23 623 162 778 1.66e-46 177
Msa0553540 MtrunA17_Chr5g0411621 42.083 240 135 3 23 260 51 288 5.41e-47 177
Msa0553540 MtrunA17_Chr5g0411621 22.761 268 201 4 342 609 462 723 5.23e-16 82.0
Msa0553540 MtrunA17_Chr5g0429871 28.299 576 356 18 7 560 650 1190 1.31e-46 178
Msa0553540 MtrunA17_Chr5g0429871 24.270 548 294 18 83 551 40 545 1.55e-32 134
Msa0553540 MtrunA17_Chr3g0104621 26.471 646 405 16 19 618 52 673 1.43e-46 178
Msa0553540 MtrunA17_Chr3g0104621 27.387 639 382 23 7 606 747 1342 4.16e-46 176
Msa0553540 MtrunA17_Chr7g0265991 26.833 600 354 15 17 575 53 608 4.17e-46 173
Msa0553540 MtrunA17_Chr1g0171351 26.300 654 378 19 1 607 865 1461 3.48e-45 174
Msa0553540 MtrunA17_Chr1g0171351 25.674 631 399 13 22 604 175 783 6.99e-42 164
Msa0553540 MtrunA17_Chr7g0265981 26.829 574 316 17 22 547 882 1399 3.83e-45 174
Msa0553540 MtrunA17_Chr7g0265981 27.061 643 377 20 22 606 183 791 3.00e-42 165
Msa0553540 MtrunA17_Chr1g0198291 26.768 594 351 16 22 580 893 1437 6.70e-45 173
Msa0553540 MtrunA17_Chr1g0198291 27.354 669 408 22 22 641 188 827 3.03e-43 168
Msa0553540 MtrunA17_Chr7g0261981 27.045 599 362 18 23 572 162 734 6.72e-45 173
Msa0553540 MtrunA17_Chr7g0261981 25.833 600 381 15 23 613 861 1405 1.40e-42 166
Msa0553540 MtrunA17_Chr7g0265961 25.478 628 392 17 22 604 181 777 9.24e-45 172
Msa0553540 MtrunA17_Chr7g0265961 25.465 538 342 12 17 537 825 1320 1.64e-34 141
Msa0553540 MtrunA17_Chr7g0265971 27.080 565 340 14 22 537 177 718 1.10e-44 172
Msa0553540 MtrunA17_Chr7g0265971 25.637 589 324 15 22 550 874 1408 5.30e-41 161
Msa0553540 MtrunA17_Chr0c20g0493841 25.415 602 395 14 16 600 851 1415 4.27e-44 170
Msa0553540 MtrunA17_Chr0c20g0493841 35.971 278 139 8 23 264 168 442 3.07e-39 155
Msa0553540 MtrunA17_Chr4g0004021 26.358 626 396 16 23 604 171 775 1.73e-43 168
Msa0553540 MtrunA17_Chr4g0004021 29.291 437 268 13 23 445 863 1272 1.41e-41 162
Msa0553540 MtrunA17_Chr7g0266001 26.833 641 389 17 22 609 62 675 6.12e-43 165
Msa0553540 MtrunA17_Chr4g0062871 25.997 577 377 11 22 580 843 1387 1.11e-42 166
Msa0553540 MtrunA17_Chr4g0062871 26.741 632 387 18 23 604 150 755 8.01e-39 154
Msa0553540 MtrunA17_Chr1g0148811 26.256 617 395 17 7 604 837 1412 1.98e-42 165
Msa0553540 MtrunA17_Chr1g0148811 28.250 623 388 18 23 604 154 758 2.18e-38 153
Msa0553540 MtrunA17_Chr3g0093331 35.537 242 151 3 43 280 18 258 1.95e-34 132
Msa0553540 MtrunA17_Chr7g0262321 38.426 216 128 4 18 230 563 776 5.78e-34 139
Msa0553540 MtrunA17_Chr7g0262321 40.580 138 78 4 129 264 24 159 2.06e-22 102
Msa0553540 MtrunA17_Chr4g0069211 37.089 213 131 2 16 226 839 1050 6.40e-34 139
Msa0553540 MtrunA17_Chr4g0069211 33.333 279 134 10 23 264 167 430 3.07e-32 134
Msa0553540 MtrunA17_Chr6g0472481 34.978 223 129 3 23 230 13 234 2.53e-33 129
Msa0553540 MtrunA17_Chr4g0039221 77.586 58 13 0 1 58 7 64 2.59e-24 96.7
Msa0553540 MtrunA17_Chr7g0215001 25.510 392 236 13 170 529 1 368 1.74e-20 94.0
Msa0553540 MtrunA17_Chr7g0249091 30.472 233 127 8 21 229 98 319 2.39e-18 87.0
Msa0553540 MtrunA17_Chr4g0047831 50.000 78 39 0 144 221 6 83 8.05e-18 79.0
Msa0553540 MtrunA17_Chr4g0050191 63.636 55 16 2 3 56 41 92 3.65e-15 72.0
Msa0553540 MtrunA17_Chr3g0093041 26.587 252 156 8 34 279 206 434 4.53e-15 79.0
Msa0553540 MtrunA17_Chr7g0257321 55.357 56 22 1 1 56 1 53 6.95e-15 69.7
Msa0553540 MtrunA17_Chr1g0178481 31.401 207 129 6 23 224 396 594 1.33e-14 77.4
Msa0553540 MtrunA17_Chr7g0227391 30.045 223 133 10 23 235 442 651 4.49e-14 75.9
Msa0553540 MtrunA17_Chr4g0041871 33.163 196 108 9 23 208 1023 1205 1.48e-13 74.3
Msa0553540 MtrunA17_Chr4g0061601 28.761 226 139 8 23 239 404 616 3.27e-13 72.8
Msa0553540 MtrunA17_Chr1g0194031 32.086 187 107 8 23 200 401 576 7.22e-13 72.0
Msa0553540 MtrunA17_Chr7g0257341 32.716 162 94 4 24 181 573 723 9.03e-13 72.0
Msa0553540 MtrunA17_Chr7g0257341 24.123 228 158 6 18 240 1472 1689 2.57e-11 67.4
Msa0553540 MtrunA17_Chr3g0132711 25.472 212 139 6 34 239 220 418 1.05e-12 71.2
Msa0553540 MtrunA17_Chr5g0433051 29.730 222 131 9 21 232 479 685 1.14e-12 71.2
Msa0553540 MtrunA17_Chr1g0193991 31.551 187 108 8 23 200 406 581 2.43e-12 70.5
Msa0553540 MtrunA17_Chr7g0238421 31.293 147 89 4 33 177 14 150 3.06e-12 67.0
Msa0553540 MtrunA17_Chr6g0452141 30.374 214 126 8 23 223 1034 1237 3.33e-12 70.1
Msa0553540 MtrunA17_Chr5g0410921 31.193 218 131 9 23 233 373 578 3.44e-12 70.1
Msa0553540 MtrunA17_Chr6g0451881 30.841 214 125 8 23 223 1024 1227 5.46e-12 69.3
Msa0553540 MtrunA17_Chr6g0452111 31.156 199 126 6 32 223 1044 1238 8.91e-12 68.9
Msa0553540 MtrunA17_Chr6g0452071 30.374 214 126 8 23 223 230 433 9.24e-12 67.8
Msa0553540 MtrunA17_Chr5g0412741 29.555 247 143 10 20 253 470 698 1.04e-11 68.2
Msa0553540 MtrunA17_Chr6g0452041 30.374 214 126 8 23 223 1036 1239 1.06e-11 68.6
Msa0553540 MtrunA17_Chr6g0452171 31.034 203 123 8 23 215 1037 1232 1.48e-11 68.2
Msa0553540 MtrunA17_Chr3g0128381 32.402 179 103 8 20 190 404 572 1.67e-11 67.4
Msa0553540 MtrunA17_Chr8g0341761 28.218 202 117 6 37 233 627 805 1.81e-11 67.8
Msa0553540 MtrunA17_Chr3g0119381 33.529 170 97 7 38 200 431 591 1.84e-11 67.8
Msa0553540 MtrunA17_Chr6g0481921 31.343 201 115 8 38 229 303 489 2.01e-11 67.4
Msa0553540 MtrunA17_Chr2g0285191 30.851 188 110 8 22 200 414 590 2.02e-11 67.8
Msa0553540 MtrunA17_Chr4g0069401 32.258 186 108 7 23 200 390 565 3.47e-11 67.0
Msa0553540 MtrunA17_Chr3g0138211 32.768 177 104 7 38 208 428 595 3.76e-11 66.6
Msa0553540 MtrunA17_Chr8g0353781 27.317 205 121 6 37 236 630 811 4.01e-11 66.6
Msa0553540 MtrunA17_Chr4g0026741 51.786 56 27 0 3 58 49 104 4.12e-11 61.2
Msa0553540 MtrunA17_Chr8g0341751 28.000 200 120 6 37 233 455 633 4.51e-11 66.6
Msa0553540 MtrunA17_Chr2g0285311 31.183 186 112 7 22 200 385 561 4.97e-11 66.2
Msa0553540 MtrunA17_Chr7g0264631 32.178 202 114 10 27 216 1102 1292 5.48e-11 66.2
Msa0553540 MtrunA17_Chr4g0069361 31.720 186 109 8 23 200 395 570 6.22e-11 65.9
Msa0553540 MtrunA17_Chr1g0180601 32.843 204 109 10 35 218 428 623 9.21e-11 65.5
Msa0553540 MtrunA17_Chr3g0093091 24.390 246 164 7 3 242 617 846 9.36e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0553540 AT3G21090.1 66.867 667 213 2 2 660 24 690 0.0 965
Msa0553540 AT1G51500.1 67.218 665 212 4 2 660 23 687 0.0 930
Msa0553540 AT1G51460.1 64.232 671 229 1 1 660 8 678 0.0 909
Msa0553540 AT1G17840.1 54.101 634 285 4 2 635 49 676 0.0 684
Msa0553540 AT2G28070.2 35.702 605 377 8 3 605 114 708 1.73e-121 378
Msa0553540 AT2G28070.1 35.702 605 377 8 3 605 114 708 1.73e-121 378
Msa0553540 AT2G01320.8 32.236 577 360 11 5 572 72 626 1.59e-90 295
Msa0553540 AT2G01320.5 32.236 577 360 11 5 572 72 626 1.59e-90 295
Msa0553540 AT2G01320.3 32.872 578 356 13 5 573 72 626 5.42e-90 295
Msa0553540 AT2G01320.2 32.872 578 356 13 5 573 72 626 6.34e-90 295
Msa0553540 AT2G01320.1 32.872 578 356 13 5 573 72 626 6.59e-90 295
Msa0553540 AT2G01320.4 32.872 578 356 13 5 573 72 626 6.59e-90 295
Msa0553540 AT2G01320.7 34.968 469 280 8 5 466 72 522 5.70e-84 274
Msa0553540 AT2G01320.6 34.968 469 280 8 5 466 72 522 5.70e-84 274
Msa0553540 AT2G39350.1 31.481 540 336 6 20 536 106 634 1.26e-76 260
Msa0553540 AT3G55100.1 30.168 537 356 8 18 548 42 565 3.78e-74 251
Msa0553540 AT3G55100.2 30.168 537 356 8 18 548 42 565 3.78e-74 251
Msa0553540 AT3G55090.1 30.150 534 349 7 20 536 104 630 4.58e-73 250
Msa0553540 AT2G37360.1 28.594 626 409 11 19 609 129 751 5.88e-73 250
Msa0553540 AT3G55110.1 30.784 523 346 6 21 536 89 602 1.09e-72 249
Msa0553540 AT1G31770.1 32.397 534 311 13 21 536 79 580 1.16e-72 247
Msa0553540 AT5G06530.2 31.123 543 341 11 10 536 166 691 2.78e-72 248
Msa0553540 AT5G06530.1 31.123 543 341 11 10 536 166 691 2.78e-72 248
Msa0553540 AT5G06530.3 31.166 523 334 9 10 516 166 678 2.29e-71 244
Msa0553540 AT1G71960.1 36.486 444 265 9 21 461 81 510 2.48e-71 244
Msa0553540 AT5G13580.1 31.579 532 340 6 17 536 102 621 1.13e-70 243
Msa0553540 AT3G55130.1 29.915 585 369 14 17 582 94 656 9.00e-70 241
Msa0553540 AT3G25620.2 30.899 534 328 12 21 536 97 607 9.17e-69 237
Msa0553540 AT3G53510.1 29.412 629 391 12 19 609 122 735 1.17e-67 236
Msa0553540 AT4G27420.1 33.117 462 264 11 21 466 64 496 7.93e-67 231
Msa0553540 AT5G06530.4 31.440 493 312 9 40 516 1 483 1.33e-66 227
Msa0553540 AT3G13220.1 32.402 537 317 15 21 537 104 614 6.73e-65 227
Msa0553540 AT2G13610.1 27.243 613 416 12 6 607 45 638 1.25e-63 223
Msa0553540 AT3G25620.1 36.119 371 204 8 21 376 97 449 3.12e-62 214
Msa0553540 AT1G53270.1 28.666 607 360 16 13 604 33 581 8.00e-60 211
Msa0553540 AT4G25750.1 26.904 591 371 14 23 604 30 568 2.66e-57 204
Msa0553540 AT5G19410.1 27.348 607 388 15 8 604 52 615 2.38e-56 202
Msa0553540 AT5G19410.2 27.348 607 388 15 8 604 61 624 2.45e-56 202
Msa0553540 AT2G29940.1 31.150 565 334 19 16 559 845 1375 2.74e-55 204
Msa0553540 AT2G29940.1 24.824 568 356 12 19 537 171 716 1.23e-45 175
Msa0553540 AT1G59870.1 28.807 545 335 13 16 537 886 1400 4.39e-54 201
Msa0553540 AT1G59870.1 27.392 533 304 13 14 487 177 685 1.02e-43 169
Msa0553540 AT1G15210.1 28.571 553 344 15 7 537 850 1373 4.85e-54 201
Msa0553540 AT1G15210.1 34.783 276 145 5 23 264 184 458 1.25e-40 160
Msa0553540 AT5G52860.1 27.517 596 359 16 23 604 44 580 6.57e-54 195
Msa0553540 AT1G53390.1 39.711 277 155 5 1 274 505 772 1.22e-53 199
Msa0553540 AT4G15230.4 26.290 601 387 17 17 599 742 1304 2.62e-53 198
Msa0553540 AT4G15230.4 25.841 565 347 14 23 537 77 619 7.21e-48 182
Msa0553540 AT4G15230.3 26.290 601 387 17 17 599 821 1383 4.83e-53 198
Msa0553540 AT4G15230.3 25.841 565 347 14 23 537 156 698 9.69e-48 182
Msa0553540 AT4G15230.1 26.290 601 387 17 17 599 821 1383 4.83e-53 198
Msa0553540 AT4G15230.1 25.841 565 347 14 23 537 156 698 9.69e-48 182
Msa0553540 AT4G15215.9 27.000 600 384 17 17 599 815 1377 8.15e-53 197
Msa0553540 AT4G15215.9 26.064 564 347 15 23 537 150 692 3.61e-47 180
Msa0553540 AT4G15215.4 27.000 600 384 17 17 599 815 1377 8.15e-53 197
Msa0553540 AT4G15215.4 26.064 564 347 15 23 537 150 692 3.61e-47 180
Msa0553540 AT4G15215.5 27.000 600 384 17 17 599 815 1377 8.15e-53 197
Msa0553540 AT4G15215.5 26.064 564 347 15 23 537 150 692 3.61e-47 180
Msa0553540 AT4G15215.3 27.000 600 384 17 17 599 815 1377 8.15e-53 197
Msa0553540 AT4G15215.3 26.064 564 347 15 23 537 150 692 3.61e-47 180
Msa0553540 AT4G15215.2 27.000 600 384 17 17 599 815 1377 8.15e-53 197
Msa0553540 AT4G15215.2 26.064 564 347 15 23 537 150 692 3.61e-47 180
Msa0553540 AT4G15215.11 27.000 600 384 17 17 599 818 1380 8.16e-53 197
Msa0553540 AT4G15215.11 26.064 564 347 15 23 537 153 695 3.96e-47 180
Msa0553540 AT4G15215.8 27.000 600 384 17 17 599 808 1370 9.07e-53 197
Msa0553540 AT4G15215.8 26.418 564 338 16 23 537 150 685 8.98e-47 179
Msa0553540 AT4G15215.10 27.000 600 384 17 17 599 808 1370 9.07e-53 197
Msa0553540 AT4G15215.10 26.418 564 338 16 23 537 150 685 8.98e-47 179
Msa0553540 AT4G15215.6 27.000 600 384 17 17 599 808 1370 9.07e-53 197
Msa0553540 AT4G15215.6 26.418 564 338 16 23 537 150 685 8.98e-47 179
Msa0553540 AT4G15215.7 27.000 600 384 17 17 599 808 1370 9.07e-53 197
Msa0553540 AT4G15215.7 26.418 564 338 16 23 537 150 685 8.98e-47 179
Msa0553540 AT4G15215.1 27.000 600 384 17 17 599 811 1373 9.60e-53 197
Msa0553540 AT4G15215.1 26.418 564 338 16 23 537 153 688 1.03e-46 179
Msa0553540 AT2G37010.2 38.610 259 151 4 1 256 482 735 1.40e-52 196
Msa0553540 AT2G37010.1 38.610 259 151 4 1 256 482 735 1.40e-52 196
Msa0553540 AT1G15520.1 27.955 533 340 13 23 537 852 1358 2.50e-52 196
Msa0553540 AT1G15520.1 29.688 576 331 18 11 537 159 709 2.76e-52 196
Msa0553540 AT1G15520.2 29.809 577 329 19 11 537 159 709 3.91e-52 195
Msa0553540 AT1G15520.2 30.233 430 260 12 23 438 852 1255 5.86e-43 167
Msa0553540 AT3G16340.2 27.660 564 357 13 22 565 835 1367 1.05e-51 194
Msa0553540 AT3G16340.2 28.600 507 290 14 14 472 153 635 5.27e-45 173
Msa0553540 AT3G16340.1 27.660 564 357 13 22 565 840 1372 1.37e-51 193
Msa0553540 AT3G16340.1 28.458 506 297 12 14 472 153 640 2.77e-46 177
Msa0553540 AT3G30842.1 28.757 539 334 15 23 543 848 1354 2.25e-50 190
Msa0553540 AT3G30842.1 25.627 558 354 14 23 535 161 702 1.43e-44 172
Msa0553540 AT4G15236.1 25.682 623 382 17 17 606 811 1385 4.89e-50 189
Msa0553540 AT4G15236.1 24.823 564 354 14 23 537 153 695 2.09e-42 166
Msa0553540 AT2G37280.1 26.182 550 361 13 16 548 830 1351 1.49e-49 187
Msa0553540 AT2G37280.1 25.224 670 435 14 17 646 148 791 3.02e-48 183
Msa0553540 AT2G37280.4 26.182 550 361 13 16 548 672 1193 1.67e-49 187
Msa0553540 AT2G37280.4 25.268 653 422 14 34 646 7 633 1.92e-45 175
Msa0553540 AT4G15233.3 24.219 640 401 15 1 606 736 1325 1.95e-49 187
Msa0553540 AT4G15233.3 25.043 587 365 15 4 537 71 635 4.90e-45 174
Msa0553540 AT4G15233.6 24.219 640 401 15 1 606 736 1325 1.95e-49 187
Msa0553540 AT4G15233.6 25.043 587 365 15 4 537 71 635 4.90e-45 174
Msa0553540 AT2G37280.3 26.182 550 361 13 16 548 859 1380 2.04e-49 187
Msa0553540 AT2G37280.3 24.320 699 434 15 17 646 148 820 2.56e-43 168
Msa0553540 AT3G53480.1 26.087 552 365 12 7 543 860 1383 2.14e-49 187
Msa0553540 AT3G53480.1 25.984 635 385 19 23 604 189 791 3.00e-46 177
Msa0553540 AT5G60740.1 40.000 275 157 4 1 272 497 766 2.17e-49 186
Msa0553540 AT4G15233.7 24.286 630 413 14 1 606 780 1369 2.21e-49 187
Msa0553540 AT4G15233.7 26.011 569 364 15 4 537 133 679 5.97e-47 179
Msa0553540 AT4G15233.1 24.286 630 413 14 1 606 798 1387 2.58e-49 186
Msa0553540 AT4G15233.1 25.043 587 365 15 4 537 133 697 6.16e-45 173
Msa0553540 AT4G15233.8 24.286 630 413 14 1 606 789 1378 2.64e-49 186
Msa0553540 AT4G15233.8 24.658 584 362 15 4 537 133 688 4.84e-41 161
Msa0553540 AT4G15230.2 26.769 523 335 14 17 520 821 1314 2.86e-49 186
Msa0553540 AT4G15230.2 25.841 565 347 14 23 537 156 698 1.07e-47 182
Msa0553540 AT2G37280.2 25.224 670 435 14 17 646 148 791 4.45e-48 183
Msa0553540 AT2G37280.2 26.112 517 341 11 16 516 830 1321 2.99e-47 180
Msa0553540 AT4G15233.5 26.011 569 364 15 4 537 71 617 6.57e-47 179
Msa0553540 AT4G15233.5 24.386 611 391 14 24 606 677 1244 1.95e-46 177
Msa0553540 AT4G15233.4 26.011 569 364 15 4 537 71 617 6.57e-47 179
Msa0553540 AT4G15233.4 24.386 611 391 14 24 606 677 1244 1.95e-46 177
Msa0553540 AT2G26910.1 26.846 596 395 13 22 603 844 1412 1.55e-46 178
Msa0553540 AT2G26910.1 27.745 674 391 23 16 629 143 780 1.72e-42 166
Msa0553540 AT4G15233.2 25.043 587 365 15 4 537 133 697 5.81e-45 173
Msa0553540 AT4G15233.2 24.535 538 347 11 1 515 798 1299 1.34e-44 172
Msa0553540 AT1G66950.1 28.391 553 319 17 22 515 189 723 3.84e-44 171
Msa0553540 AT1G66950.1 26.442 624 368 17 17 604 874 1442 4.31e-43 167
Msa0553540 AT2G36380.1 27.010 622 338 19 22 572 187 763 5.17e-43 167
Msa0553540 AT2G36380.1 26.418 617 373 17 17 602 873 1439 6.10e-42 164
Msa0553540 AT3G21080.1 40.136 147 79 3 479 620 105 247 3.68e-26 108
Msa0553540 AT5G58270.1 30.870 230 135 11 21 242 492 705 2.17e-15 80.5
Msa0553540 AT5G61700.2 25.962 208 137 5 3 204 595 791 1.64e-14 77.8
Msa0553540 AT5G61700.4 25.962 208 137 5 3 204 595 791 1.64e-14 77.8
Msa0553540 AT4G28620.1 29.461 241 143 11 14 242 440 665 1.36e-13 74.7
Msa0553540 AT2G41700.2 34.356 163 90 6 24 181 498 648 1.48e-13 75.1
Msa0553540 AT2G41700.1 33.728 169 95 6 24 187 568 724 1.69e-13 75.1
Msa0553540 AT3G47780.1 24.017 229 159 5 3 226 613 831 1.87e-13 74.3
Msa0553540 AT3G47730.1 26.923 208 131 7 24 224 547 740 2.22e-13 74.3
Msa0553540 AT5G39040.1 29.545 220 145 7 23 239 413 625 2.44e-13 73.9
Msa0553540 AT5G61700.1 24.348 230 157 5 3 226 595 813 3.69e-13 73.6
Msa0553540 AT4G25960.1 30.568 229 122 10 23 235 418 625 4.29e-13 73.6
Msa0553540 AT1G10680.2 31.839 223 127 11 23 235 378 585 4.64e-13 73.2
Msa0553540 AT1G10680.1 31.839 223 127 11 23 235 378 585 5.21e-13 73.2
Msa0553540 AT5G61740.3 24.348 230 157 5 3 226 448 666 1.08e-12 72.0
Msa0553540 AT4G28630.1 28.033 239 148 10 14 240 438 664 1.21e-12 71.6
Msa0553540 AT3G47750.1 26.486 185 119 5 3 181 615 788 1.22e-12 72.0
Msa0553540 AT5G61740.2 24.348 230 157 5 3 226 553 771 1.38e-12 71.6
Msa0553540 AT5G61740.1 24.348 230 157 5 3 226 587 805 1.79e-12 71.2
Msa0553540 AT4G18050.1 34.615 182 90 9 33 200 381 547 2.44e-12 70.9
Msa0553540 AT4G18050.2 34.615 182 90 9 33 200 391 557 2.85e-12 70.9
Msa0553540 AT3G47760.1 24.031 258 175 8 3 254 574 816 3.27e-12 70.5
Msa0553540 AT3G47760.3 24.031 258 175 8 3 254 614 856 4.20e-12 70.1
Msa0553540 AT1G70610.2 29.150 247 144 10 23 256 291 519 5.77e-12 68.9
Msa0553540 AT3G47760.2 24.031 258 175 8 3 254 584 826 7.06e-12 69.3
Msa0553540 AT2G47000.4 29.787 188 114 7 21 200 399 576 8.17e-12 69.3
Msa0553540 AT1G70610.1 29.150 247 144 10 23 256 472 700 8.84e-12 68.9
Msa0553540 AT3G28860.1 26.888 331 198 17 23 342 382 679 1.03e-11 68.9
Msa0553540 AT2G47000.3 29.787 188 114 7 21 200 399 576 1.04e-11 68.9
Msa0553540 AT2G47000.7 29.787 188 114 7 21 200 399 576 1.04e-11 68.9
Msa0553540 AT5G61730.1 26.263 198 125 7 34 224 549 732 1.18e-11 68.6
Msa0553540 AT2G47000.2 29.787 188 114 7 21 200 399 576 1.29e-11 68.6
Msa0553540 AT5G61730.2 26.768 198 124 7 34 224 559 742 1.37e-11 68.6
Msa0553540 AT2G36910.1 30.876 217 122 8 22 218 384 592 1.41e-11 68.6
Msa0553540 AT2G47000.6 29.787 188 114 7 21 200 399 576 1.99e-11 68.2
Msa0553540 AT2G47000.5 29.787 188 114 7 21 200 399 576 1.99e-11 68.2
Msa0553540 AT2G47000.1 29.787 188 114 7 21 200 399 576 1.99e-11 68.2
Msa0553540 AT3G47740.1 25.203 246 162 8 3 242 610 839 2.26e-11 67.8
Msa0553540 AT5G61690.2 26.263 198 125 7 34 224 558 741 3.47e-11 67.0
Msa0553540 AT3G28390.1 31.132 212 115 8 32 229 1006 1200 4.32e-11 67.0
Msa0553540 AT3G28390.1 29.952 207 130 8 35 236 376 572 9.98e-11 65.9
Msa0553540 AT3G28360.1 32.524 206 108 8 38 229 1013 1201 6.86e-11 66.2

Find 140 sgRNAs with CRISPR-Local

Find 440 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGATCTCTTTCTACTTTC+TGG 0.049597 4_1:+50810164 Msa0553540:CDS
TATCTTACTCAGCAAATTTA+AGG 0.112967 4_1:+50809823 Msa0553540:CDS
GTATATCTGTTTGGATCTTT+TGG 0.125824 4_1:+50812596 Msa0553540:CDS
TATCAATCCCATAAGAAAAT+TGG 0.159532 4_1:-50812670 None:intergenic
CCTATTTCATACATCAATTA+TGG 0.174076 4_1:+50813155 Msa0553540:CDS
ATGATCTCTCCTTTCAGTTT+TGG 0.182435 4_1:-50813601 None:intergenic
CCATAATTGATGTATGAAAT+AGG 0.185361 4_1:-50813155 None:intergenic
CTTCTTCATTCTCAAAATTA+AGG 0.199958 4_1:+50813717 Msa0553540:CDS
AAACAGAATCATGGCTATTA+TGG 0.202628 4_1:+50806236 Msa0553540:CDS
TTTCTTATGGGATTGATAAT+TGG 0.208330 4_1:+50812675 Msa0553540:CDS
TTTGGGTCACCAGGTTCTTT+AGG 0.260950 4_1:-50813583 None:intergenic
GAAAGGCTGAATGGATATTA+TGG 0.270721 4_1:+50812450 Msa0553540:CDS
ATGATCTCTTTCTACTTTCT+GGG 0.279513 4_1:+50810165 Msa0553540:CDS
TGATGACTGCTGGCTATTTC+CGG 0.281301 4_1:+50813096 Msa0553540:CDS
TGAAAGTTGATTATTCAAAA+TGG 0.302081 4_1:+50813644 Msa0553540:CDS
AGGGTAACGCCAGAAGAATT+TGG 0.305788 4_1:-50813135 None:intergenic
GCGATCTTCCCAAATTCTTC+TGG 0.328013 4_1:+50813126 Msa0553540:CDS
CATACAAGGAGATTGCTTAA+TGG 0.333505 4_1:+50806192 Msa0553540:CDS
CATTGTAGAGGGAACAATTA+TGG 0.335544 4_1:+50809881 Msa0553540:CDS
TCAAGAAGCGGGCATCGTTC+AGG 0.337104 4_1:+50813794 Msa0553540:CDS
ATCTACTCTTCTTGATGCTT+TGG 0.337158 4_1:+50806278 Msa0553540:CDS
GTTGATAAGTTCATTGTTGA+TGG 0.344203 4_1:-50811838 None:intergenic
GTATGTCCATTGCCAAAGTT+TGG 0.345171 4_1:-50806174 None:intergenic
GATTGTGCTGATAGACTTGT+AGG 0.354501 4_1:+50809918 Msa0553540:CDS
CTGATAGACTTGTAGGAAAT+TGG 0.355741 4_1:+50809925 Msa0553540:CDS
CTAGAGATGTGGGGTACTAT+TGG 0.376833 4_1:+50812153 Msa0553540:CDS
TGATAGTTGCTTCCACCATT+TGG 0.376863 4_1:-50812099 None:intergenic
TTGTAGGAAATTGGCACTTA+AGG 0.377407 4_1:+50809934 Msa0553540:CDS
TGTAGGAAATTGGCACTTAA+GGG 0.378569 4_1:+50809935 Msa0553540:CDS
TTATGGAGCATGGGGATTGC+AGG 0.379390 4_1:+50813172 Msa0553540:CDS
ATTATGGGTCCATCTGGTTC+TGG 0.380004 4_1:+50806252 Msa0553540:CDS
ACAATGCAATTCTAATGAAA+TGG 0.387638 4_1:-50813889 None:intergenic
CATAATTGATGTATGAAATA+GGG 0.391239 4_1:-50813154 None:intergenic
TCTGAAGGGTTTCTTCTACT+TGG 0.393827 4_1:-50811137 None:intergenic
ATCAATCCCATAAGAAAATT+GGG 0.394919 4_1:-50812669 None:intergenic
ATAATAGCCATGATTCTGTT+TGG 0.395034 4_1:-50806234 None:intergenic
TTCATTTCCTCTATGAATGA+TGG 0.400089 4_1:-50812323 None:intergenic
TGATGAGCCAACAAGTGGTT+TGG 0.408781 4_1:+50810031 Msa0553540:CDS
AAGAAAAGGAGATTAGACTA+TGG 0.409404 4_1:+50809344 Msa0553540:CDS
GGGTAACGCCAGAAGAATTT+GGG 0.415275 4_1:-50813134 None:intergenic
AGTGTTGTAATTCCAAACTT+TGG 0.418834 4_1:+50806162 Msa0553540:CDS
AGATTGCTTAATGGTTTGAA+TGG 0.422251 4_1:+50806201 Msa0553540:CDS
AACAGAATCATGGCTATTAT+GGG 0.424886 4_1:+50806237 Msa0553540:CDS
GCTGGAAATGTTATCATGTC+TGG 0.433458 4_1:+50809302 Msa0553540:CDS
ACTCTTCTTGATGCTTTGGC+AGG 0.434230 4_1:+50806282 Msa0553540:CDS
GCTTTCAAGAATGATATGAT+TGG 0.435038 4_1:+50813547 Msa0553540:CDS
GTTGCTTCCACCATTTGGCT+TGG 0.446943 4_1:-50812094 None:intergenic
ATCATCCTCAAAACACTGCT+TGG 0.448762 4_1:+50813619 Msa0553540:CDS
AATGATGATTATAGCTGCAT+TGG 0.457169 4_1:+50812644 Msa0553540:CDS
GCAGTGATGTCATTTGCTAC+AGG 0.458834 4_1:+50812522 Msa0553540:CDS
ATGGCTATTATGGGTCCATC+TGG 0.460173 4_1:+50806246 Msa0553540:CDS
TTAAGAAACATTGCTCATGA+TGG 0.461579 4_1:+50810086 Msa0553540:CDS
CTTTCAAGAATGATATGATT+GGG 0.465357 4_1:+50813548 Msa0553540:CDS
TGGGAAGATCGCGGATCTGC+CGG 0.476853 4_1:-50813115 None:intergenic
TTTGGGCTGTATAGCTGTTG+TGG 0.479359 4_1:+50812614 Msa0553540:CDS
TGCATTTCAGGTAGACTCGC+TGG 0.481105 4_1:+50809284 Msa0553540:intron
ATGTGGGGTACTATTGGATA+AGG 0.483315 4_1:+50812159 Msa0553540:CDS
TAGCACTTGAAATTCTTACT+AGG 0.486078 4_1:+50809991 Msa0553540:CDS
CATACATCAATTATGGAGCA+TGG 0.486868 4_1:+50813162 Msa0553540:CDS
ACAACTACTATGATGACCTC+TGG 0.487118 4_1:+50811200 Msa0553540:CDS
AATGACATCACTGCTACAAA+AGG 0.489807 4_1:-50812513 None:intergenic
TGATCTCTTTCTACTTTCTG+GGG 0.489994 4_1:+50810166 Msa0553540:CDS
ATGCAATGGTTGGTGTCTCT+TGG 0.491423 4_1:-50813836 None:intergenic
TTCTACAAAGAAAGGCTGAA+TGG 0.492157 4_1:+50812441 Msa0553540:CDS
GCACTGTCCAAACCACTTGT+TGG 0.492437 4_1:-50810038 None:intergenic
ATTGTTGATGGTGCCAATGT+TGG 0.496841 4_1:-50811826 None:intergenic
AGAAAAGGAGATTAGACTAT+GGG 0.498475 4_1:+50809345 Msa0553540:CDS
ACACAAGAAGACATATTGTT+GGG 0.500880 4_1:+50809777 Msa0553540:CDS
TGCAGGTCTTCTACAAAGAA+AGG 0.506243 4_1:+50812433 Msa0553540:intron
TAAGAAACATTGCTCATGAT+GGG 0.509037 4_1:+50810087 Msa0553540:CDS
AGAGGGAACAATTATGGAGA+TGG 0.512569 4_1:+50809887 Msa0553540:CDS
GTAATTCCAAACTTTGGCAA+TGG 0.513085 4_1:+50806168 Msa0553540:CDS
GAATGATGGAAATCCTCCTA+TGG 0.513452 4_1:-50812309 None:intergenic
ATCATTCATAGAGGAAATGA+AGG 0.517994 4_1:+50812325 Msa0553540:CDS
ATACATCAATTATGGAGCAT+GGG 0.521899 4_1:+50813163 Msa0553540:CDS
ATGGGATTGATAATTGGAGC+AGG 0.524123 4_1:+50812681 Msa0553540:CDS
AAAGCAAGAGCCAAGCCAAA+TGG 0.525874 4_1:+50812084 Msa0553540:CDS
GACACAAGAAGACATATTGT+TGG 0.525876 4_1:+50809776 Msa0553540:CDS
GGTTTCTTCTACTTGGACAT+GGG 0.527136 4_1:-50811130 None:intergenic
GTCGCCTTATCTTTGTGTGT+CGG 0.532220 4_1:+50812194 Msa0553540:CDS
TGCTGAACCAAACAGAATCA+TGG 0.534128 4_1:+50806227 Msa0553540:CDS
GGGTTTCTTCTACTTGGACA+TGG 0.542259 4_1:-50811131 None:intergenic
GCATCCATTGTCTTCTCAAG+AGG 0.542259 4_1:+50813855 Msa0553540:CDS
GAGGGAACAATTATGGAGAT+GGG 0.544614 4_1:+50809888 Msa0553540:CDS
CAACGTAGGAAATGATCTGA+AGG 0.547630 4_1:-50811152 None:intergenic
CAAGAATGATATGATTGGGA+TGG 0.548066 4_1:+50813552 Msa0553540:CDS
ATGACATTCATGTCCATAGG+AGG 0.551015 4_1:+50812296 Msa0553540:CDS
GATCTCTTTCTACTTTCTGG+GGG 0.551751 4_1:+50810167 Msa0553540:CDS
TTCCTTGATGAGCCAACAAG+TGG 0.553210 4_1:+50810026 Msa0553540:CDS
AGTTGATTATTCAAAATGGT+GGG 0.557115 4_1:+50813648 Msa0553540:CDS
AGGATTTCCATCATTCATAG+AGG 0.557291 4_1:+50812316 Msa0553540:CDS
AAGTTGATTATTCAAAATGG+TGG 0.559482 4_1:+50813647 Msa0553540:CDS
AACCACTTGTTGGCTCATCA+AGG 0.560158 4_1:-50810028 None:intergenic
AGAGGTAAATGACATTGTAG+AGG 0.563748 4_1:+50809869 Msa0553540:CDS
TATGTCTTCTTGTGTCACAT+AGG 0.564420 4_1:-50809769 None:intergenic
TTGAATGCAGGAACCAACAT+TGG 0.565519 4_1:+50811813 Msa0553540:intron
CAGTGATGTCATTTGCTACA+GGG 0.570763 4_1:+50812523 Msa0553540:CDS
CACTTAAGGGGTATAAGTGG+TGG 0.573632 4_1:+50809948 Msa0553540:CDS
GTGAACATGTCTAGAGATGT+GGG 0.574659 4_1:+50812143 Msa0553540:CDS
TGGCACTTAAGGGGTATAAG+TGG 0.575434 4_1:+50809945 Msa0553540:CDS
CATCCATTGTCTTCTCAAGA+GGG 0.575790 4_1:+50813856 Msa0553540:CDS
TACATCAATTATGGAGCATG+GGG 0.575831 4_1:+50813164 Msa0553540:CDS
TGTGAACATGTCTAGAGATG+TGG 0.578089 4_1:+50812142 Msa0553540:CDS
AGCTACAATGACAAAAGAAG+AGG 0.578847 4_1:+50809851 Msa0553540:CDS
AAAGAGGGATGCATCTTGTG+TGG 0.584925 4_1:+50806130 None:intergenic
GTAGGAAATTGGCACTTAAG+GGG 0.587986 4_1:+50809936 Msa0553540:CDS
CACTGCAACGTATCAAGAAG+CGG 0.594446 4_1:+50813782 Msa0553540:CDS
GGTCTTATGATGATGACTGC+TGG 0.594603 4_1:+50813086 Msa0553540:CDS
GCAAGAGCCAAGCCAAATGG+TGG 0.598329 4_1:+50812087 Msa0553540:CDS
ACTGCAACGTATCAAGAAGC+GGG 0.598641 4_1:+50813783 Msa0553540:CDS
TGTTCCGACACACAAAGATA+AGG 0.599837 4_1:-50812198 None:intergenic
CCTGGTGACCCAAAACTGAA+AGG 0.601158 4_1:+50813592 Msa0553540:CDS
GTGTAGATACTGTGAAGGAA+AGG 0.601644 4_1:-50813751 None:intergenic
GAGTTTGATCCTAAAGAACC+TGG 0.605576 4_1:+50813574 Msa0553540:CDS
AGGGTCTATAACATATTACA+TGG 0.607459 4_1:+50812542 Msa0553540:CDS
GAGGTAAATGACATTGTAGA+GGG 0.607619 4_1:+50809870 Msa0553540:CDS
AATTCATCAACCAAGTAGTG+AGG 0.611540 4_1:+50810127 Msa0553540:CDS
AAGAGGGATGCATCTTGTGT+GGG 0.611942 4_1:+50806131 None:intergenic
CAACTACTATGATGACCTCT+GGG 0.612257 4_1:+50811201 Msa0553540:CDS
GGATGAAGATGACCACAGCT+AGG 0.614478 4_1:-50813672 None:intergenic
TGAGAAGACAATGGATGCAA+TGG 0.631172 4_1:-50813850 None:intergenic
AAATAACTCTATGCAACATG+AGG 0.634933 4_1:-50813693 None:intergenic
TTCATGACATTCATGTCCAT+AGG 0.639062 4_1:+50812293 Msa0553540:CDS
AACGTAGGAAATGATCTGAA+GGG 0.648504 4_1:-50811151 None:intergenic
TACTCATAGAGAAATACCGT+TGG 0.650400 4_1:+50811878 Msa0553540:CDS
TGTCTCTTGGAAGCGAACGA+TGG 0.650991 4_1:-50813823 None:intergenic
ACCAGCTGAAAATGCAGTTG+AGG 0.652667 4_1:+50810208 Msa0553540:CDS
AAGACAATGGATGCAATGGT+TGG 0.655272 4_1:-50813846 None:intergenic
GAAAAGGAGATTAGACTATG+GGG 0.660221 4_1:+50809346 Msa0553540:CDS
AAAATGGTGGGACCTAGCTG+TGG 0.660866 4_1:+50813660 Msa0553540:CDS
AAGTTGCATATTCTGACCAA+CGG 0.663312 4_1:-50811894 None:intergenic
AGACCCTCTTGAGAAGACAA+TGG 0.665617 4_1:-50813859 None:intergenic
TCATCAAGGAACAAGAGACA+TGG 0.670614 4_1:-50810014 None:intergenic
TTGAGCAACAAAATATGCTG+AGG 0.670691 4_1:-50810060 None:intergenic
AGTCTGAATTAATACAACGT+AGG 0.671113 4_1:-50811166 None:intergenic
GCTTTGTGTAGATACTGTGA+AGG 0.674854 4_1:-50813756 None:intergenic
AGAAGAATTTGGGAAGATCG+CGG 0.693290 4_1:-50813124 None:intergenic
ATATACATGTGTTCTCCCAG+AGG 0.699259 4_1:-50811216 None:intergenic
ACTTTGGCAATGGACATACA+AGG 0.701205 4_1:+50806178 Msa0553540:CDS
TGAACATGTCTAGAGATGTG+GGG 0.783001 4_1:+50812144 Msa0553540:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAACAGTAAAAAAAAAATTA+GGG + chr4_1:50806804-50806823 Msa0553540:intron 10.0%
!! TTATTCAAAGAAAAAAAATT+TGG + chr4_1:50807012-50807031 Msa0553540:intron 10.0%
!! TATTCAAAGAAAAAAAATTT+GGG + chr4_1:50807013-50807032 Msa0553540:intron 10.0%
!! AAAAGTCATAATTATAAATT+GGG - chr4_1:50807885-50807904 None:intergenic 10.0%
!! TAAAAGTCATAATTATAAAT+TGG - chr4_1:50807886-50807905 None:intergenic 10.0%
!!! CTATTATTTTAAAAATGAAT+GGG - chr4_1:50807993-50808012 None:intergenic 10.0%
!!! TCTATTATTTTAAAAATGAA+TGG - chr4_1:50807994-50808013 None:intergenic 10.0%
!! ATAATAATATAATATATGCA+AGG + chr4_1:50808228-50808247 Msa0553540:intron 10.0%
!! TTTACTATATGAAAATATTA+AGG + chr4_1:50812013-50812032 Msa0553540:intron 10.0%
!!! TTTTTTTACTCAAAATATAA+AGG - chr4_1:50812730-50812749 None:intergenic 10.0%
!!! ATTTATTTTTTTTCTCCATA+TGG + chr4_1:50806704-50806723 Msa0553540:intron 15.0%
!! GTAACAGTAAAAAAAAAATT+AGG + chr4_1:50806803-50806822 Msa0553540:intron 15.0%
!!! TTTTACGTTAAAAATATCTT+GGG + chr4_1:50806985-50807004 Msa0553540:intron 15.0%
!!! AAAACATTATAAAAGGTATT+TGG - chr4_1:50807556-50807575 None:intergenic 15.0%
!! AAAGTTCAAAACATTATAAA+AGG - chr4_1:50807563-50807582 None:intergenic 15.0%
!! ATATGTACTATAACAAAAAT+TGG + chr4_1:50809100-50809119 Msa0553540:intron 15.0%
!!! TATTAATTTGGTCTTTAAAA+CGG - chr4_1:50810271-50810290 None:intergenic 15.0%
!!! TATTTGCATGTTTTTTAAAT+GGG - chr4_1:50810714-50810733 None:intergenic 15.0%
!! TTACAAATTAGAATATTTAC+TGG - chr4_1:50810888-50810907 None:intergenic 15.0%
!!! TTTTTTTTTTTGAAGTAAGA+TGG - chr4_1:50811056-50811075 None:intergenic 15.0%
!!! TAATAGTTATCTTTAAAAGA+TGG + chr4_1:50812808-50812827 Msa0553540:intron 15.0%
!!! TGTAAAACTTTTTACAATAA+CGG + chr4_1:50813008-50813027 Msa0553540:intron 15.0%
!! TCAAAAATACAAAGTTTATT+AGG - chr4_1:50813396-50813415 None:intergenic 15.0%
!! AACAAATGAAAGCAATTAAT+AGG + chr4_1:50806730-50806749 Msa0553540:intron 20.0%
!!! ATTTTGCCAAATCTATATTT+TGG - chr4_1:50806856-50806875 None:intergenic 20.0%
!!! CTTTTACGTTAAAAATATCT+TGG + chr4_1:50806984-50807003 Msa0553540:intron 20.0%
!! AAAATATTAACATGTGTCAT+TGG + chr4_1:50807628-50807647 Msa0553540:intron 20.0%
!! TTCTTTGAACATTTGTTTAA+AGG + chr4_1:50807691-50807710 Msa0553540:intron 20.0%
!!! TTGATTGACATTTTATTCTT+TGG + chr4_1:50807755-50807774 Msa0553540:intron 20.0%
!! TATATAACTGAAAAGAGATT+TGG + chr4_1:50807846-50807865 Msa0553540:intron 20.0%
!! AAAAAAAGAACAATTCCATT+CGG + chr4_1:50808278-50808297 Msa0553540:intron 20.0%
!!! TTGAAGTTTGTTTATCTTTA+AGG - chr4_1:50808852-50808871 None:intergenic 20.0%
!! AATGCATTGGATATATAATT+GGG + chr4_1:50809255-50809274 Msa0553540:intron 20.0%
!!! TAATTTTTTCTTCATAGAAG+TGG - chr4_1:50809408-50809427 None:intergenic 20.0%
!!! AAACGACATTTATTTTGAAA+CGG - chr4_1:50809449-50809468 None:intergenic 20.0%
!! ACTCTTACAAAATTATTCTT+TGG - chr4_1:50809622-50809641 None:intergenic 20.0%
!! CTATGTGAAAAAATCTAAAA+CGG + chr4_1:50809682-50809701 Msa0553540:intron 20.0%
!! TTATGTATCAAACACTATAT+AGG + chr4_1:50809746-50809765 Msa0553540:intron 20.0%
!! TAACAAATAATATTAGACAG+TGG + chr4_1:50810429-50810448 Msa0553540:intron 20.0%
!! TCATTTATTTATTCATGTGT+TGG + chr4_1:50810498-50810517 Msa0553540:intron 20.0%
!! CATTTATTTATTCATGTGTT+GGG + chr4_1:50810499-50810518 Msa0553540:intron 20.0%
!!! ATTTGCATGTTTTTTAAATG+GGG - chr4_1:50810713-50810732 None:intergenic 20.0%
!!! CTATTTGCATGTTTTTTAAA+TGG - chr4_1:50810715-50810734 None:intergenic 20.0%
!! ATATGTAAGTATAGAATTTC+AGG - chr4_1:50810781-50810800 None:intergenic 20.0%
!! TTATTATAGAACATGAGAAT+TGG - chr4_1:50811267-50811286 None:intergenic 20.0%
!! AAGTAAAGATAAAACAAAGA+AGG - chr4_1:50811322-50811341 None:intergenic 20.0%
!!! CGGTTTTTAAAAAATTAATC+TGG - chr4_1:50811351-50811370 None:intergenic 20.0%
!! GTCACATTTAATATATTCTT+GGG - chr4_1:50811532-50811551 None:intergenic 20.0%
!! AGTCACATTTAATATATTCT+TGG - chr4_1:50811533-50811552 None:intergenic 20.0%
!! TGACTCAAATTTAATAAATG+CGG + chr4_1:50811548-50811567 Msa0553540:intron 20.0%
!! TTAAAAGATGGTTACAAAAT+AGG + chr4_1:50812820-50812839 Msa0553540:intron 20.0%
!! ATAAAAATTAAACTCGACTA+TGG + chr4_1:50813034-50813053 Msa0553540:intron 20.0%
!! CATAATTGATGTATGAAATA+GGG - chr4_1:50813157-50813176 None:intergenic 20.0%
!! TTCTTCTATAAGCTATAATT+GGG + chr4_1:50813417-50813436 Msa0553540:intron 20.0%
!!! TGAAAGTTGATTATTCAAAA+TGG + chr4_1:50813644-50813663 Msa0553540:CDS 20.0%
!!! TATTTTTAGGTCATTCATGT+TGG + chr4_1:50806400-50806419 Msa0553540:intron 25.0%
! GAAATCCATACTCTATAAAT+TGG + chr4_1:50806952-50806971 Msa0553540:intron 25.0%
! GCAATTACTTATTATGTGTT+TGG - chr4_1:50807079-50807098 None:intergenic 25.0%
!! ACTAAAATGTCCTTTTACAT+GGG - chr4_1:50807209-50807228 None:intergenic 25.0%
!! TACTAAAATGTCCTTTTACA+TGG - chr4_1:50807210-50807229 None:intergenic 25.0%
!!! TACTCTATCAAAAAGCATTT+TGG + chr4_1:50807340-50807359 Msa0553540:intron 25.0%
! AGTCATAATTATAAATTGGG+AGG - chr4_1:50807882-50807901 None:intergenic 25.0%
! GTTCTTAATAAATTAAGACG+TGG - chr4_1:50808158-50808177 None:intergenic 25.0%
!!! GAATGGAATTGTTCTTTTTT+TGG - chr4_1:50808279-50808298 None:intergenic 25.0%
!!! ATTCCATTTTATTTCCCATT+CGG + chr4_1:50808305-50808324 Msa0553540:intron 25.0%
! GCTAAATATAGTCATAGAAT+GGG - chr4_1:50808397-50808416 None:intergenic 25.0%
! AGCTAAATATAGTCATAGAA+TGG - chr4_1:50808398-50808417 None:intergenic 25.0%
! TACTGTAGATAAAATGCTAA+GGG - chr4_1:50808464-50808483 None:intergenic 25.0%
! TGTAGCTAGGTATAATTTAA+TGG - chr4_1:50808590-50808609 None:intergenic 25.0%
! AATTGAAGAATAATGTAGCT+AGG - chr4_1:50808603-50808622 None:intergenic 25.0%
! ATTTATTTCAAGACGTGAAT+TGG + chr4_1:50808729-50808748 Msa0553540:intron 25.0%
! TTTATTTCAAGACGTGAATT+GGG + chr4_1:50808730-50808749 Msa0553540:intron 25.0%
! AAGGATAAATAAAGTAGCAT+GGG - chr4_1:50808833-50808852 None:intergenic 25.0%
! TAAGGATAAATAAAGTAGCA+TGG - chr4_1:50808834-50808853 None:intergenic 25.0%
! AACAAACTTCAATTATTCAG+CGG + chr4_1:50808860-50808879 Msa0553540:intron 25.0%
!! AATATTTGACTTCTTTGTCA+TGG + chr4_1:50808933-50808952 Msa0553540:intron 25.0%
! TGTACTATAACAAAAATTGG+TGG + chr4_1:50809103-50809122 Msa0553540:intron 25.0%
! GTACTATAACAAAAATTGGT+GGG + chr4_1:50809104-50809123 Msa0553540:intron 25.0%
! CAATTATATATCCAATGCAT+TGG - chr4_1:50809256-50809275 None:intergenic 25.0%
! CAATGCATTGGATATATAAT+TGG + chr4_1:50809254-50809273 Msa0553540:intron 25.0%
!! TGCTTTTAAATGGAAAGAAA+AGG + chr4_1:50809330-50809349 Msa0553540:CDS 25.0%
! ATAATGACTTGAAAATGATC+CGG - chr4_1:50809562-50809581 None:intergenic 25.0%
! TATCTTACTCAGCAAATTTA+AGG + chr4_1:50809823-50809842 Msa0553540:CDS 25.0%
! TTAAAACGGTAAATATGAGA+GGG - chr4_1:50810257-50810276 None:intergenic 25.0%
!! TTTAAAACGGTAAATATGAG+AGG - chr4_1:50810258-50810277 None:intergenic 25.0%
! AGGGTACAATGATATTAATT+TGG - chr4_1:50810283-50810302 None:intergenic 25.0%
! AAATTAATATCATTGTACCC+TGG + chr4_1:50810282-50810301 Msa0553540:intron 25.0%
! AATATATGGTGACTTGATAA+CGG - chr4_1:50810309-50810328 None:intergenic 25.0%
! TCAAAGTAGTTGCAAATATA+TGG - chr4_1:50810323-50810342 None:intergenic 25.0%
! TATGATTAGTGCTTCATTTA+AGG + chr4_1:50810592-50810611 Msa0553540:intron 25.0%
! ATGATTAGTGCTTCATTTAA+GGG + chr4_1:50810593-50810612 Msa0553540:intron 25.0%
!! GGCATACATAAGAATTTTAA+TGG - chr4_1:50810692-50810711 None:intergenic 25.0%
! AAAAACTGCATGTAAATAGA+TGG - chr4_1:50811095-50811114 None:intergenic 25.0%
!!! TCTATTTACATGCAGTTTTT+TGG + chr4_1:50811095-50811114 Msa0553540:intron 25.0%
!!! TTTTTAAAAACCGAACTTGA+TGG + chr4_1:50811358-50811377 Msa0553540:intron 25.0%
! ACAATATTCAGATTTCTCTT+TGG + chr4_1:50811465-50811484 Msa0553540:intron 25.0%
!!! TTAAGGGACAAAAGTATTAT+AGG - chr4_1:50811768-50811787 None:intergenic 25.0%
! TAATTAATAACACGATTCGT+TGG - chr4_1:50812039-50812058 None:intergenic 25.0%
!! ACATCTTTTGTATATCTGTT+TGG + chr4_1:50812587-50812606 Msa0553540:CDS 25.0%
!! TATATCTGTTTGGATCTTTT+GGG + chr4_1:50812597-50812616 Msa0553540:CDS 25.0%
! ATCAATCCCATAAGAAAATT+GGG - chr4_1:50812672-50812691 None:intergenic 25.0%
! TATCAATCCCATAAGAAAAT+TGG - chr4_1:50812673-50812692 None:intergenic 25.0%
!! TTTCTTATGGGATTGATAAT+TGG + chr4_1:50812675-50812694 Msa0553540:CDS 25.0%
! CCATAATTGATGTATGAAAT+AGG - chr4_1:50813158-50813177 None:intergenic 25.0%
! CCTATTTCATACATCAATTA+TGG + chr4_1:50813155-50813174 Msa0553540:CDS 25.0%
! TAACGAGTACTTATCATATA+TGG + chr4_1:50813321-50813340 Msa0553540:intron 25.0%
! AACGAGTACTTATCATATAT+GGG + chr4_1:50813322-50813341 Msa0553540:intron 25.0%
! TACTATCAAAGAGAAAATGA+GGG + chr4_1:50813364-50813383 Msa0553540:intron 25.0%
! CTTCTTCTATAAGCTATAAT+TGG + chr4_1:50813416-50813435 Msa0553540:intron 25.0%
! CTTTCAAGAATGATATGATT+GGG + chr4_1:50813548-50813567 Msa0553540:CDS 25.0%
!! AAGTTGATTATTCAAAATGG+TGG + chr4_1:50813647-50813666 Msa0553540:CDS 25.0%
! AGTTGATTATTCAAAATGGT+GGG + chr4_1:50813648-50813667 Msa0553540:CDS 25.0%
! CTTCTTCATTCTCAAAATTA+AGG + chr4_1:50813717-50813736 Msa0553540:CDS 25.0%
AGTGTTGTAATTCCAAACTT+TGG + chr4_1:50806162-50806181 Msa0553540:CDS 30.0%
AGATTGCTTAATGGTTTGAA+TGG + chr4_1:50806201-50806220 Msa0553540:CDS 30.0%
ATAATAGCCATGATTCTGTT+TGG - chr4_1:50806237-50806256 None:intergenic 30.0%
AAACAGAATCATGGCTATTA+TGG + chr4_1:50806236-50806255 Msa0553540:CDS 30.0%
AACAGAATCATGGCTATTAT+GGG + chr4_1:50806237-50806256 Msa0553540:CDS 30.0%
!! TCATGACTTGTGATTTTCAT+GGG - chr4_1:50806325-50806344 None:intergenic 30.0%
!! TTCATGACTTGTGATTTTCA+TGG - chr4_1:50806326-50806345 None:intergenic 30.0%
! TTCCCTTTTATATATTGCCA+AGG + chr4_1:50806549-50806568 Msa0553540:intron 30.0%
! TCCCTTTTATATATTGCCAA+GGG + chr4_1:50806550-50806569 Msa0553540:intron 30.0%
ATATTATATAACTCACCCCT+TGG - chr4_1:50806569-50806588 None:intergenic 30.0%
ATAATATCCTTGTTGCTATG+AGG + chr4_1:50806582-50806601 Msa0553540:intron 30.0%
TAATATCCTTGTTGCTATGA+GGG + chr4_1:50806583-50806602 Msa0553540:intron 30.0%
CTTTCATTTGTTCATCCATA+TGG - chr4_1:50806722-50806741 None:intergenic 30.0%
GATGTGCATGTTTGATATTA+CGG + chr4_1:50806761-50806780 Msa0553540:intron 30.0%
GAACCTCCAAAATATAGATT+TGG + chr4_1:50806847-50806866 Msa0553540:intron 30.0%
!! TTGCCAAATCTATATTTTGG+AGG - chr4_1:50806853-50806872 None:intergenic 30.0%
AAGCTCCAATTTATAGAGTA+TGG - chr4_1:50806960-50806979 None:intergenic 30.0%
! AATCTACGGAGATTGTTATT+TGG + chr4_1:50807127-50807146 Msa0553540:intron 30.0%
! CTTTTACATGGGATGTATAA+TGG - chr4_1:50807198-50807217 None:intergenic 30.0%
CATTATACATCCCATGTAAA+AGG + chr4_1:50807196-50807215 Msa0553540:intron 30.0%
GAAACTACGCTAATACAAAA+CGG + chr4_1:50807366-50807385 Msa0553540:intron 30.0%
! CATATCTAACTATGAGTTGA+TGG - chr4_1:50807816-50807835 None:intergenic 30.0%
TGTTCTATTTCACTTTCTTC+TGG + chr4_1:50808096-50808115 Msa0553540:intron 30.0%
TTAAGACGTGGATTTGAAAA+TGG - chr4_1:50808146-50808165 None:intergenic 30.0%
!!! AATTGTTCTTTTTTTGGTGG+TGG - chr4_1:50808273-50808292 None:intergenic 30.0%
!!! TGGAATTGTTCTTTTTTTGG+TGG - chr4_1:50808276-50808295 None:intergenic 30.0%
TAAAATGGAATGAAACCGAA+TGG - chr4_1:50808296-50808315 None:intergenic 30.0%
AAACCGAATGGGAAATAAAA+TGG - chr4_1:50808311-50808330 None:intergenic 30.0%
AAAATGGAATGAAACCGAAT+GGG - chr4_1:50808295-50808314 None:intergenic 30.0%
TAAAATGGAATGAAACCGAA+TGG - chr4_1:50808296-50808315 None:intergenic 30.0%
ACGTGATGAACGAAATAAAA+TGG - chr4_1:50808338-50808357 None:intergenic 30.0%
CTACTGTAGATAAAATGCTA+AGG - chr4_1:50808465-50808484 None:intergenic 30.0%
AAAGTCCATACTAAATTTGC+CGG + chr4_1:50808502-50808521 Msa0553540:intron 30.0%
! ATTTGATTTCAACCTTGTAC+CGG - chr4_1:50808524-50808543 None:intergenic 30.0%
!! TACATGCTTTTTGCTTTGTT+TGG - chr4_1:50809054-50809073 None:intergenic 30.0%
TGAACAAATTACCAATGCAT+TGG + chr4_1:50809242-50809261 Msa0553540:intron 30.0%
!! TCTGGTAATGTGCTTTTAAA+TGG + chr4_1:50809320-50809339 Msa0553540:CDS 30.0%
AAGAAAAGGAGATTAGACTA+TGG + chr4_1:50809344-50809363 Msa0553540:CDS 30.0%
AGAAAAGGAGATTAGACTAT+GGG + chr4_1:50809345-50809364 Msa0553540:CDS 30.0%
AACCCTAAATTAATCTTGAC+CGG + chr4_1:50809540-50809559 Msa0553540:intron 30.0%
ATCCGGTCAAGATTAATTTA+GGG - chr4_1:50809545-50809564 None:intergenic 30.0%
ACACAAGAAGACATATTGTT+GGG + chr4_1:50809777-50809796 Msa0553540:CDS 30.0%
TAGCACTTGAAATTCTTACT+AGG + chr4_1:50809991-50810010 Msa0553540:CDS 30.0%
TTAAGAAACATTGCTCATGA+TGG + chr4_1:50810086-50810105 Msa0553540:CDS 30.0%
TAAGAAACATTGCTCATGAT+GGG + chr4_1:50810087-50810106 Msa0553540:CDS 30.0%
ATGATCTCTTTCTACTTTCT+GGG + chr4_1:50810165-50810184 Msa0553540:CDS 30.0%
!!! TTTTTTTGAAGGGAACAAGA+GGG - chr4_1:50810534-50810553 None:intergenic 30.0%
!!! TTTTTTTTGAAGGGAACAAG+AGG - chr4_1:50810535-50810554 None:intergenic 30.0%
AATCATAGAAGCTAACAAGA+GGG - chr4_1:50810579-50810598 None:intergenic 30.0%
TAATCATAGAAGCTAACAAG+AGG - chr4_1:50810580-50810599 None:intergenic 30.0%
! CATTCCAAACTCAAAGTTTT+GGG + chr4_1:50810622-50810641 Msa0553540:intron 30.0%
! AAATCCCAAAACTTTGAGTT+TGG - chr4_1:50810629-50810648 None:intergenic 30.0%
!!! AAACTCAAAGTTTTGGGATT+TGG + chr4_1:50810628-50810647 Msa0553540:intron 30.0%
AGTCTGAATTAATACAACGT+AGG - chr4_1:50811169-50811188 None:intergenic 30.0%
! TTTGTTCCTTCAATTGATTC+AGG + chr4_1:50811287-50811306 Msa0553540:intron 30.0%
ATTTGTTTCACTCAAGAATG+TGG + chr4_1:50811494-50811513 Msa0553540:intron 30.0%
TGAAATTCAAACATCGCTAT+CGG - chr4_1:50811701-50811720 None:intergenic 30.0%
! GAAGGAAGTGATAATGTTAA+GGG - chr4_1:50811784-50811803 None:intergenic 30.0%
! TGAAGGAAGTGATAATGTTA+AGG - chr4_1:50811785-50811804 None:intergenic 30.0%
! TGCATTCAAACAGATTTTGA+AGG - chr4_1:50811802-50811821 None:intergenic 30.0%
TTCAAAATCTGTTTGAATGC+AGG + chr4_1:50811801-50811820 Msa0553540:intron 30.0%
! GTTGATAAGTTCATTGTTGA+TGG - chr4_1:50811841-50811860 None:intergenic 30.0%
GTAAGTATCCCTTTATTCAT+CGG + chr4_1:50811952-50811971 Msa0553540:intron 30.0%
TACAACATCCGATGAATAAA+GGG - chr4_1:50811963-50811982 None:intergenic 30.0%
TTACAACATCCGATGAATAA+AGG - chr4_1:50811964-50811983 None:intergenic 30.0%
! CATGTTATTTGAGAAGACTT+AGG - chr4_1:50811987-50812006 None:intergenic 30.0%
! CGAATCGTGTTATTAATTAC+AGG + chr4_1:50812040-50812059 Msa0553540:intron 30.0%
! TCGTGTTATTAATTACAGGA+AGG + chr4_1:50812044-50812063 Msa0553540:intron 30.0%
!!! TATACAGCTATTTTTGCAAG+AGG + chr4_1:50812245-50812264 Msa0553540:CDS 30.0%
TTCATTTCCTCTATGAATGA+TGG - chr4_1:50812326-50812345 None:intergenic 30.0%
ATCATTCATAGAGGAAATGA+AGG + chr4_1:50812325-50812344 Msa0553540:CDS 30.0%
AGGGTCTATAACATATTACA+TGG + chr4_1:50812542-50812561 Msa0553540:CDS 30.0%
! GTATATCTGTTTGGATCTTT+TGG + chr4_1:50812596-50812615 Msa0553540:CDS 30.0%
AATGATGATTATAGCTGCAT+TGG + chr4_1:50812644-50812663 Msa0553540:CDS 30.0%
!! ATTGGTTCCCAATTTTCTTA+TGG + chr4_1:50812662-50812681 Msa0553540:CDS 30.0%
! TTGGTTCCCAATTTTCTTAT+GGG + chr4_1:50812663-50812682 Msa0553540:CDS 30.0%
!! ACTCTATTTCTATTAGACGT+CGG - chr4_1:50812785-50812804 None:intergenic 30.0%
AACCACTAAACTCAAATCAT+CGG + chr4_1:50812910-50812929 Msa0553540:intron 30.0%
TGTAAAACATACATGTGTAC+AGG + chr4_1:50813064-50813083 Msa0553540:intron 30.0%
GTAAAACATACATGTGTACA+GGG + chr4_1:50813065-50813084 Msa0553540:intron 30.0%
ATACATCAATTATGGAGCAT+GGG + chr4_1:50813163-50813182 Msa0553540:CDS 30.0%
CTACTATCAAAGAGAAAATG+AGG + chr4_1:50813363-50813382 Msa0553540:intron 30.0%
ACAAACACATCAATTGTAAG+TGG - chr4_1:50813489-50813508 None:intergenic 30.0%
TGACATAACCTTAGTGATTA+TGG + chr4_1:50813512-50813531 Msa0553540:intron 30.0%
GACATAACCTTAGTGATTAT+GGG + chr4_1:50813513-50813532 Msa0553540:intron 30.0%
ACATAACCTTAGTGATTATG+GGG + chr4_1:50813514-50813533 Msa0553540:intron 30.0%
GCTTTCAAGAATGATATGAT+TGG + chr4_1:50813547-50813566 Msa0553540:CDS 30.0%
AAATAACTCTATGCAACATG+AGG - chr4_1:50813696-50813715 None:intergenic 30.0%
GTAATTCCAAACTTTGGCAA+TGG + chr4_1:50806168-50806187 Msa0553540:CDS 35.0%
CATACAAGGAGATTGCTTAA+TGG + chr4_1:50806192-50806211 Msa0553540:CDS 35.0%
ATCTACTCTTCTTGATGCTT+TGG + chr4_1:50806278-50806297 Msa0553540:CDS 35.0%
!! CATGACTTGTGATTTTCATG+GGG - chr4_1:50806324-50806343 None:intergenic 35.0%
CAAGATGAAAAGAGAAGACT+TGG - chr4_1:50806529-50806548 None:intergenic 35.0%
CCCCTTGGCAATATATAAAA+GGG - chr4_1:50806554-50806573 None:intergenic 35.0%
! CCCTTTTATATATTGCCAAG+GGG + chr4_1:50806551-50806570 Msa0553540:intron 35.0%
ACCCCTTGGCAATATATAAA+AGG - chr4_1:50806555-50806574 None:intergenic 35.0%
AATATCCTTGTTGCTATGAG+GGG + chr4_1:50806584-50806603 Msa0553540:intron 35.0%
ATCACCCTATAACTGAAGTA+AGG + chr4_1:50806620-50806639 Msa0553540:intron 35.0%
CGGTCAATGTCTCTAAATTA+AGG + chr4_1:50806781-50806800 Msa0553540:intron 35.0%
ACTCTATAAATTGGAGCTTG+TGG + chr4_1:50806961-50806980 Msa0553540:intron 35.0%
TTACATGGGATGTATAATGG+AGG - chr4_1:50807195-50807214 None:intergenic 35.0%
! TTAACACTCTCTTTTACGTG+AGG - chr4_1:50807239-50807258 None:intergenic 35.0%
!! ACGTAAAAGAGAGTGTTAAG+TGG + chr4_1:50807240-50807259 Msa0553540:intron 35.0%
!! CGTAAAAGAGAGTGTTAAGT+GGG + chr4_1:50807241-50807260 Msa0553540:intron 35.0%
GATATGTTGACCACTATATG+TGG - chr4_1:50807318-50807337 None:intergenic 35.0%
AAGCAATCCTCTGAATTACT+AGG + chr4_1:50807461-50807480 Msa0553540:intron 35.0%
AGCAATCCTCTGAATTACTA+GGG + chr4_1:50807462-50807481 Msa0553540:intron 35.0%
! AGGGTTCATCCTCTAAAAAT+CGG + chr4_1:50807481-50807500 Msa0553540:intron 35.0%
!! GTTAATCCTCCGATTTTTAG+AGG - chr4_1:50807493-50807512 None:intergenic 35.0%
CACTAAAAACAACCCATTGT+CGG + chr4_1:50807729-50807748 Msa0553540:intron 35.0%
TATAATATATGCAAGGTCCG+AGG + chr4_1:50808235-50808254 Msa0553540:intron 35.0%
! TTGTACCGGCAAATTTAGTA+TGG - chr4_1:50808510-50808529 None:intergenic 35.0%
ATACTAAATTTGCCGGTACA+AGG + chr4_1:50808509-50808528 Msa0553540:intron 35.0%
CAAAGAATGAAGCAAAAGCT+TGG + chr4_1:50808635-50808654 Msa0553540:intron 35.0%
AATAAAGTAGCATGGGTCAT+AGG - chr4_1:50808826-50808845 None:intergenic 35.0%
TACTAACATCTACTCTTGAC+AGG + chr4_1:50808902-50808921 Msa0553540:intron 35.0%
ACTAACATCTACTCTTGACA+GGG + chr4_1:50808903-50808922 Msa0553540:intron 35.0%
!!! GCTTTTTGCTTTGTTTGGAT+TGG - chr4_1:50809049-50809068 None:intergenic 35.0%
AAAATAAGGGCTTAGGTTCT+AGG - chr4_1:50809155-50809174 None:intergenic 35.0%
!! TAGAACCTAAGCCCTTATTT+TGG + chr4_1:50809154-50809173 Msa0553540:intron 35.0%
AATGTCCAAAATAAGGGCTT+AGG - chr4_1:50809162-50809181 None:intergenic 35.0%
!!! TAAGCCCTTATTTTGGACAT+TGG + chr4_1:50809161-50809180 Msa0553540:intron 35.0%
!!! AAGCCCTTATTTTGGACATT+GGG + chr4_1:50809162-50809181 Msa0553540:intron 35.0%
CTACCCAATGTCCAAAATAA+GGG - chr4_1:50809168-50809187 None:intergenic 35.0%
ACTACCCAATGTCCAAAATA+AGG - chr4_1:50809169-50809188 None:intergenic 35.0%
!! ATTGGGATTTGTTGCATTTC+AGG + chr4_1:50809272-50809291 Msa0553540:intron 35.0%
GAAAAGGAGATTAGACTATG+GGG + chr4_1:50809346-50809365 Msa0553540:CDS 35.0%
GATCCGGTCAAGATTAATTT+AGG - chr4_1:50809546-50809565 None:intergenic 35.0%
TATGTCTTCTTGTGTCACAT+AGG - chr4_1:50809772-50809791 None:intergenic 35.0%
GACACAAGAAGACATATTGT+TGG + chr4_1:50809776-50809795 Msa0553540:CDS 35.0%
! TCTTCTTTTGTCATTGTAGC+TGG - chr4_1:50809852-50809871 None:intergenic 35.0%
AGCTACAATGACAAAAGAAG+AGG + chr4_1:50809851-50809870 Msa0553540:CDS 35.0%
AGAGGTAAATGACATTGTAG+AGG + chr4_1:50809869-50809888 Msa0553540:CDS 35.0%
GAGGTAAATGACATTGTAGA+GGG + chr4_1:50809870-50809889 Msa0553540:CDS 35.0%
CATTGTAGAGGGAACAATTA+TGG + chr4_1:50809881-50809900 Msa0553540:CDS 35.0%
CTGATAGACTTGTAGGAAAT+TGG + chr4_1:50809925-50809944 Msa0553540:CDS 35.0%
TTGTAGGAAATTGGCACTTA+AGG + chr4_1:50809934-50809953 Msa0553540:CDS 35.0%
TGTAGGAAATTGGCACTTAA+GGG + chr4_1:50809935-50809954 Msa0553540:CDS 35.0%
TTGAGCAACAAAATATGCTG+AGG - chr4_1:50810063-50810082 None:intergenic 35.0%
AATTCATCAACCAAGTAGTG+AGG + chr4_1:50810127-50810146 Msa0553540:CDS 35.0%
AATGCAAAAACCTCACTACT+TGG - chr4_1:50810140-50810159 None:intergenic 35.0%
GATGATCTCTTTCTACTTTC+TGG + chr4_1:50810164-50810183 Msa0553540:CDS 35.0%
TGATCTCTTTCTACTTTCTG+GGG + chr4_1:50810166-50810185 Msa0553540:CDS 35.0%
TAAATATGAGAGGGAGAGAT+TGG - chr4_1:50810248-50810267 None:intergenic 35.0%
TATTCATGTGTTGGGAACTA+TGG + chr4_1:50810507-50810526 Msa0553540:intron 35.0%
ATTAGTGCTTCATTTAAGGG+AGG + chr4_1:50810596-50810615 Msa0553540:intron 35.0%
! GCATTCCAAACTCAAAGTTT+TGG + chr4_1:50810621-50810640 Msa0553540:intron 35.0%
AACGTAGGAAATGATCTGAA+GGG - chr4_1:50811154-50811173 None:intergenic 35.0%
GAAGAACCTGAATCAATTGA+AGG - chr4_1:50811296-50811315 None:intergenic 35.0%
! ACCGAACTTGATGGTTTAAT+CGG + chr4_1:50811367-50811386 Msa0553540:intron 35.0%
ACCGATTAAACCATCAAGTT+CGG - chr4_1:50811371-50811390 None:intergenic 35.0%
TGAAACTATGTCCGAATTGT+AGG - chr4_1:50811415-50811434 None:intergenic 35.0%
!! TAGTTTCATTCTAGTTCGAG+CGG + chr4_1:50811427-50811446 Msa0553540:intron 35.0%
GAATGAACTTGACACTTGTT+TGG + chr4_1:50811575-50811594 Msa0553540:intron 35.0%
GAAGCTTCAAAGTGTAACTT+TGG + chr4_1:50811618-50811637 Msa0553540:intron 35.0%
GATAGCGATGTTTGAATTTC+AGG + chr4_1:50811700-50811719 Msa0553540:intron 35.0%
TACTCATAGAGAAATACCGT+TGG + chr4_1:50811878-50811897 Msa0553540:CDS 35.0%
AAGTTGCATATTCTGACCAA+CGG - chr4_1:50811897-50811916 None:intergenic 35.0%
! GGAACAATCTTTTATGACGT+TGG + chr4_1:50812215-50812234 Msa0553540:CDS 35.0%
TTCATGACATTCATGTCCAT+AGG + chr4_1:50812293-50812312 Msa0553540:CDS 35.0%
AGGATTTCCATCATTCATAG+AGG + chr4_1:50812316-50812335 Msa0553540:CDS 35.0%
TCGTCTCTAACATTTAGTGA+CGG + chr4_1:50812382-50812401 Msa0553540:intron 35.0%
!! TGTTTTATTCTGTCTTGTGC+AGG + chr4_1:50812416-50812435 Msa0553540:intron 35.0%
TTCTACAAAGAAAGGCTGAA+TGG + chr4_1:50812441-50812460 Msa0553540:CDS 35.0%
GAAAGGCTGAATGGATATTA+TGG + chr4_1:50812450-50812469 Msa0553540:CDS 35.0%
AATGACATCACTGCTACAAA+AGG - chr4_1:50812516-50812535 None:intergenic 35.0%
! CTTTTACACCGTCATCTAAT+AGG - chr4_1:50812869-50812888 None:intergenic 35.0%
! ATCCGATGATTTGAGTTTAG+TGG - chr4_1:50812915-50812934 None:intergenic 35.0%
CATACATCAATTATGGAGCA+TGG + chr4_1:50813162-50813181 Msa0553540:CDS 35.0%
TACATCAATTATGGAGCATG+GGG + chr4_1:50813164-50813183 Msa0553540:CDS 35.0%
CAAGAATGATATGATTGGGA+TGG + chr4_1:50813552-50813571 Msa0553540:CDS 35.0%
! TGATCTCTCCTTTCAGTTTT+GGG - chr4_1:50813603-50813622 None:intergenic 35.0%
! ATGATCTCTCCTTTCAGTTT+TGG - chr4_1:50813604-50813623 None:intergenic 35.0%
GTATGTCCATTGCCAAAGTT+TGG - chr4_1:50806177-50806196 None:intergenic 40.0%
ACTTTGGCAATGGACATACA+AGG + chr4_1:50806178-50806197 Msa0553540:CDS 40.0%
TGCTGAACCAAACAGAATCA+TGG + chr4_1:50806227-50806246 Msa0553540:CDS 40.0%
! GTAGATTTTCCAGAACCAGA+TGG - chr4_1:50806264-50806283 None:intergenic 40.0%
! ACTTGTGATTTTCATGGGGT+AGG - chr4_1:50806320-50806339 None:intergenic 40.0%
CAGGCCTTACTTCAGTTATA+GGG - chr4_1:50806627-50806646 None:intergenic 40.0%
TCAGGCCTTACTTCAGTTAT+AGG - chr4_1:50806628-50806647 None:intergenic 40.0%
TATAACTGAAGTAAGGCCTG+AGG + chr4_1:50806627-50806646 Msa0553540:intron 40.0%
TTCAGTAATCACGTTTCCTC+AGG - chr4_1:50806646-50806665 None:intergenic 40.0%
! AAATTCACGAAGTGCTCGTT+TGG + chr4_1:50806901-50806920 Msa0553540:intron 40.0%
TTCGCATGTTTGAGAGAGTT+TGG - chr4_1:50806935-50806954 None:intergenic 40.0%
TCTCATGACCACGAAATCTA+CGG + chr4_1:50807113-50807132 Msa0553540:intron 40.0%
AACAATCTCCGTAGATTTCG+TGG - chr4_1:50807124-50807143 None:intergenic 40.0%
! TGGGATGTATAATGGAGGTA+GGG - chr4_1:50807190-50807209 None:intergenic 40.0%
! ATGGGATGTATAATGGAGGT+AGG - chr4_1:50807191-50807210 None:intergenic 40.0%
!! AAAGAGAGTGTTAAGTGGGA+TGG + chr4_1:50807245-50807264 Msa0553540:intron 40.0%
GATGAACCCTAGTAATTCAG+AGG - chr4_1:50807471-50807490 None:intergenic 40.0%
! GTTCATCCTCTAAAAATCGG+AGG + chr4_1:50807484-50807503 Msa0553540:intron 40.0%
TAAAAACAACCCATTGTCGG+TGG + chr4_1:50807732-50807751 Msa0553540:intron 40.0%
!! AGTTGATGGTAGATGTGTGT+TGG - chr4_1:50807802-50807821 None:intergenic 40.0%
GCTAAGCTCATAAGGACAAA+TGG - chr4_1:50808185-50808204 None:intergenic 40.0%
!!! TTCTTTTTTTGGTGGTGGTC+GGG - chr4_1:50808268-50808287 None:intergenic 40.0%
!!! GTTCTTTTTTTGGTGGTGGT+CGG - chr4_1:50808269-50808288 None:intergenic 40.0%
!! GTGAGTAGGTCTTGTTTGTT+GGG - chr4_1:50808800-50808819 None:intergenic 40.0%
!! TGTGAGTAGGTCTTGTTTGT+TGG - chr4_1:50808801-50808820 None:intergenic 40.0%
TGGACGTTAGTTGATTGTCA+TGG + chr4_1:50808953-50808972 Msa0553540:intron 40.0%
GCTGGAAATGTTATCATGTC+TGG + chr4_1:50809302-50809321 Msa0553540:CDS 40.0%
AGAGGGAACAATTATGGAGA+TGG + chr4_1:50809887-50809906 Msa0553540:CDS 40.0%
GAGGGAACAATTATGGAGAT+GGG + chr4_1:50809888-50809907 Msa0553540:CDS 40.0%
! GATTGTGCTGATAGACTTGT+AGG + chr4_1:50809918-50809937 Msa0553540:CDS 40.0%
GTAGGAAATTGGCACTTAAG+GGG + chr4_1:50809936-50809955 Msa0553540:CDS 40.0%
TCATCAAGGAACAAGAGACA+TGG - chr4_1:50810017-50810036 None:intergenic 40.0%
GATCTCTTTCTACTTTCTGG+GGG + chr4_1:50810167-50810186 Msa0553540:CDS 40.0%
GGGGGTCAAACAATTTACTT+TGG + chr4_1:50810185-50810204 Msa0553540:CDS 40.0%
CATGTGAGAATTTCACACGA+GGG - chr4_1:50810740-50810759 None:intergenic 40.0%
ACATGTGAGAATTTCACACG+AGG - chr4_1:50810741-50810760 None:intergenic 40.0%
!!! ATGCAGTTTTTTGGCAAAGC+AGG + chr4_1:50811104-50811123 Msa0553540:intron 40.0%
CAACGTAGGAAATGATCTGA+AGG - chr4_1:50811155-50811174 None:intergenic 40.0%
ACAACTACTATGATGACCTC+TGG + chr4_1:50811200-50811219 Msa0553540:CDS 40.0%
CAACTACTATGATGACCTCT+GGG + chr4_1:50811201-50811220 Msa0553540:CDS 40.0%
ATATACATGTGTTCTCCCAG+AGG - chr4_1:50811219-50811238 None:intergenic 40.0%
AACTATGTCCGAATTGTAGG+CGG - chr4_1:50811412-50811431 None:intergenic 40.0%
!!! CTAACGCACTTTTGGAATCA+CGG - chr4_1:50811663-50811682 None:intergenic 40.0%
TTGAATGCAGGAACCAACAT+TGG + chr4_1:50811813-50811832 Msa0553540:intron 40.0%
!! ATTGTTGATGGTGCCAATGT+TGG - chr4_1:50811829-50811848 None:intergenic 40.0%
TGATAGTTGCTTCCACCATT+TGG - chr4_1:50812102-50812121 None:intergenic 40.0%
TGTGAACATGTCTAGAGATG+TGG + chr4_1:50812142-50812161 Msa0553540:CDS 40.0%
GTGAACATGTCTAGAGATGT+GGG + chr4_1:50812143-50812162 Msa0553540:CDS 40.0%
TGAACATGTCTAGAGATGTG+GGG + chr4_1:50812144-50812163 Msa0553540:CDS 40.0%
! ATGTGGGGTACTATTGGATA+AGG + chr4_1:50812159-50812178 Msa0553540:CDS 40.0%
TGTTCCGACACACAAAGATA+AGG - chr4_1:50812201-50812220 None:intergenic 40.0%
!! ATTTTTGCAAGAGGAGCATG+TGG + chr4_1:50812254-50812273 Msa0553540:CDS 40.0%
! AGCATGTGGCGCTTTTATAT+CGG + chr4_1:50812268-50812287 Msa0553540:CDS 40.0%
ATGACATTCATGTCCATAGG+AGG + chr4_1:50812296-50812315 Msa0553540:CDS 40.0%
! GAATGATGGAAATCCTCCTA+TGG - chr4_1:50812312-50812331 None:intergenic 40.0%
TGCAGGTCTTCTACAAAGAA+AGG + chr4_1:50812433-50812452 Msa0553540:intron 40.0%
! CAGTGATGTCATTTGCTACA+GGG + chr4_1:50812523-50812542 Msa0553540:CDS 40.0%
! ATGGGATTGATAATTGGAGC+AGG + chr4_1:50812681-50812700 Msa0553540:CDS 40.0%
GGTTACAAAATAGGCGTATC+CGG + chr4_1:50812829-50812848 Msa0553540:intron 40.0%
GGTGAGTTCCTATTAGATGA+CGG + chr4_1:50812858-50812877 Msa0553540:intron 40.0%
AGAAGAATTTGGGAAGATCG+CGG - chr4_1:50813127-50813146 None:intergenic 40.0%
TGCATTCCCCATAATCACTA+AGG - chr4_1:50813523-50813542 None:intergenic 40.0%
TTAGTGATTATGGGGAATGC+AGG + chr4_1:50813522-50813541 Msa0553540:intron 40.0%
TAGTGATTATGGGGAATGCA+GGG + chr4_1:50813523-50813542 Msa0553540:intron 40.0%
GAGTTTGATCCTAAAGAACC+TGG + chr4_1:50813574-50813593 Msa0553540:CDS 40.0%
ATCATCCTCAAAACACTGCT+TGG + chr4_1:50813619-50813638 Msa0553540:CDS 40.0%
! TCATTCCAAGCAGTGTTTTG+AGG - chr4_1:50813627-50813646 None:intergenic 40.0%
GTGTAGATACTGTGAAGGAA+AGG - chr4_1:50813754-50813773 None:intergenic 40.0%
GCTTTGTGTAGATACTGTGA+AGG - chr4_1:50813759-50813778 None:intergenic 40.0%
AAGACAATGGATGCAATGGT+TGG - chr4_1:50813849-50813868 None:intergenic 40.0%
TGAGAAGACAATGGATGCAA+TGG - chr4_1:50813853-50813872 None:intergenic 40.0%
CATCCATTGTCTTCTCAAGA+GGG + chr4_1:50813856-50813875 Msa0553540:CDS 40.0%
ATGGCTATTATGGGTCCATC+TGG + chr4_1:50806246-50806265 Msa0553540:CDS 45.0%
! ATTATGGGTCCATCTGGTTC+TGG + chr4_1:50806252-50806271 Msa0553540:CDS 45.0%
ACTCTTCTTGATGCTTTGGC+AGG + chr4_1:50806282-50806301 Msa0553540:CDS 45.0%
AGTGTTAAGTGGGATGGTGA+GGG + chr4_1:50807251-50807270 Msa0553540:intron 45.0%
GAGTTGTGTGCCACATATAG+TGG + chr4_1:50807305-50807324 Msa0553540:intron 45.0%
GTCAATCAACCACCGACAAT+GGG - chr4_1:50807744-50807763 None:intergenic 45.0%
TGTCAATCAACCACCGACAA+TGG - chr4_1:50807745-50807764 None:intergenic 45.0%
!! GATGTGTGTTGGCTTGGAAA+TGG - chr4_1:50807791-50807810 None:intergenic 45.0%
!! ATGGTAGATGTGTGTTGGCT+TGG - chr4_1:50807797-50807816 None:intergenic 45.0%
CCAACTGAGCTAAGCTCATA+AGG - chr4_1:50808193-50808212 None:intergenic 45.0%
CCTTATGAGCTTAGCTCAGT+TGG + chr4_1:50808190-50808209 Msa0553540:intron 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG + chr4_1:50808195-50808214 Msa0553540:intron 45.0%
!!! TCTTTTTTTGGTGGTGGTCG+GGG - chr4_1:50808267-50808286 None:intergenic 45.0%
! TGGCACTTAAGGGGTATAAG+TGG + chr4_1:50809945-50809964 Msa0553540:CDS 45.0%
! CACTTAAGGGGTATAAGTGG+TGG + chr4_1:50809948-50809967 Msa0553540:CDS 45.0%
TTCCTTGATGAGCCAACAAG+TGG + chr4_1:50810026-50810045 Msa0553540:CDS 45.0%
!! AACCACTTGTTGGCTCATCA+AGG - chr4_1:50810031-50810050 None:intergenic 45.0%
TGATGAGCCAACAAGTGGTT+TGG + chr4_1:50810031-50810050 Msa0553540:CDS 45.0%
ACCAGCTGAAAATGCAGTTG+AGG + chr4_1:50810208-50810227 Msa0553540:CDS 45.0%
! ACCTCAACTGCATTTTCAGC+TGG - chr4_1:50810212-50810231 None:intergenic 45.0%
TTTAATCGGTGACCCCTCAA+CGG + chr4_1:50811381-50811400 Msa0553540:intron 45.0%
! CGTGATTCCAAAAGTGCGTT+AGG + chr4_1:50811661-50811680 Msa0553540:intron 45.0%
! CACAATGCCTAACGCACTTT+TGG - chr4_1:50811671-50811690 None:intergenic 45.0%
AAAGCAAGAGCCAAGCCAAA+TGG + chr4_1:50812084-50812103 Msa0553540:CDS 45.0%
! CTAGAGATGTGGGGTACTAT+TGG + chr4_1:50812153-50812172 Msa0553540:CDS 45.0%
GTCGCCTTATCTTTGTGTGT+CGG + chr4_1:50812194-50812213 Msa0553540:CDS 45.0%
! GCATGTGGCGCTTTTATATC+GGG + chr4_1:50812269-50812288 Msa0553540:CDS 45.0%
! GCAGTGATGTCATTTGCTAC+AGG + chr4_1:50812522-50812541 Msa0553540:CDS 45.0%
TTTGGGCTGTATAGCTGTTG+TGG + chr4_1:50812614-50812633 Msa0553540:CDS 45.0%
ATAGGAACTCACCATCTTGC+CGG - chr4_1:50812851-50812870 None:intergenic 45.0%
! GGTCTTATGATGATGACTGC+TGG + chr4_1:50813086-50813105 Msa0553540:CDS 45.0%
! TGATGACTGCTGGCTATTTC+CGG + chr4_1:50813096-50813115 Msa0553540:CDS 45.0%
GCGATCTTCCCAAATTCTTC+TGG + chr4_1:50813126-50813145 Msa0553540:CDS 45.0%
GGGTAACGCCAGAAGAATTT+GGG - chr4_1:50813137-50813156 None:intergenic 45.0%
AGGGTAACGCCAGAAGAATT+TGG - chr4_1:50813138-50813157 None:intergenic 45.0%
TGGGGATTGCAGGTAAATTC+AGG + chr4_1:50813182-50813201 Msa0553540:intron 45.0%
ATCCGAAGCACACGATCAAA+AGG + chr4_1:50813236-50813255 Msa0553540:intron 45.0%
! GTCCTTTTGATCGTGTGCTT+CGG - chr4_1:50813241-50813260 None:intergenic 45.0%
TTTGGGTCACCAGGTTCTTT+AGG - chr4_1:50813586-50813605 None:intergenic 45.0%
CACTGCAACGTATCAAGAAG+CGG + chr4_1:50813782-50813801 Msa0553540:CDS 45.0%
ACTGCAACGTATCAAGAAGC+GGG + chr4_1:50813783-50813802 Msa0553540:CDS 45.0%
! ATGCAATGGTTGGTGTCTCT+TGG - chr4_1:50813839-50813858 None:intergenic 45.0%
GCATCCATTGTCTTCTCAAG+AGG + chr4_1:50813855-50813874 Msa0553540:CDS 45.0%
AGACCCTCTTGAGAAGACAA+TGG - chr4_1:50813862-50813881 None:intergenic 45.0%
!!! TGATTTTTATTTTTATTTTT+AGG + chr4_1:50806387-50806406 Msa0553540:intron 5.0%
!!! AAAAATAAAACATATTATTT+TGG + chr4_1:50807412-50807431 Msa0553540:intron 5.0%
!!! TTTTATCAAATAAAAAAATT+TGG - chr4_1:50808062-50808081 None:intergenic 5.0%
!! TATATGAATAAAAAATAAAA+TGG - chr4_1:50808427-50808446 None:intergenic 5.0%
!! TAATAAAAACATATTATTAT+AGG - chr4_1:50809729-50809748 None:intergenic 5.0%
!!! ATATAAATATTTTTTTTTAG+AGG + chr4_1:50810342-50810361 Msa0553540:intron 5.0%
!!! ATTATTTTTTTTTTTTTGAA+GGG - chr4_1:50810544-50810563 None:intergenic 5.0%
!!! TATTATTTTTTTTTTTTTGA+AGG - chr4_1:50810545-50810564 None:intergenic 5.0%
!! AAAAAAAATAATAATAACTA+TGG + chr4_1:50810552-50810571 Msa0553540:intron 5.0%
CAGAACCCCTCATAGCAACA+AGG - chr4_1:50806592-50806611 None:intergenic 50.0%
GAGTGTTAAGTGGGATGGTG+AGG + chr4_1:50807250-50807269 Msa0553540:intron 50.0%
CCACACACAAATGTGACACG+TGG - chr4_1:50807277-50807296 None:intergenic 50.0%
CCACGTGTCACATTTGTGTG+TGG + chr4_1:50807274-50807293 Msa0553540:intron 50.0%
CGTGTCACATTTGTGTGTGG+TGG + chr4_1:50807277-50807296 Msa0553540:intron 50.0%
!! TAGGTCTTGTTTGTTGGGCG+TGG - chr4_1:50808795-50808814 None:intergenic 50.0%
! TGGGTCATAGGAGTGTGAGT+AGG - chr4_1:50808814-50808833 None:intergenic 50.0%
! TGCATTTCAGGTAGACTCGC+TGG + chr4_1:50809284-50809303 Msa0553540:intron 50.0%
GCACTGTCCAAACCACTTGT+TGG - chr4_1:50810041-50810060 None:intergenic 50.0%
!! GGTGACTTGATAACGGTCCA+GGG - chr4_1:50810302-50810321 None:intergenic 50.0%
!! TGGTGACTTGATAACGGTCC+AGG - chr4_1:50810303-50810322 None:intergenic 50.0%
TTAATCGGTGACCCCTCAAC+GGG + chr4_1:50811382-50811401 Msa0553540:intron 50.0%
GTTGCTTCCACCATTTGGCT+TGG - chr4_1:50812097-50812116 None:intergenic 50.0%
AATAGGCGTATCCGGCAAGA+TGG + chr4_1:50812837-50812856 Msa0553540:intron 50.0%
TTATGGAGCATGGGGATTGC+AGG + chr4_1:50813172-50813191 Msa0553540:CDS 50.0%
!!! CCTTTCAGTTTTGGGTCACC+AGG - chr4_1:50813595-50813614 None:intergenic 50.0%
CCTGGTGACCCAAAACTGAA+AGG + chr4_1:50813592-50813611 Msa0553540:CDS 50.0%
! AAAATGGTGGGACCTAGCTG+TGG + chr4_1:50813660-50813679 Msa0553540:CDS 50.0%
GGATGAAGATGACCACAGCT+AGG - chr4_1:50813675-50813694 None:intergenic 50.0%
TGTCTCTTGGAAGCGAACGA+TGG - chr4_1:50813826-50813845 None:intergenic 50.0%
TAATCGGTGACCCCTCAACG+GGG + chr4_1:50811383-50811402 Msa0553540:intron 55.0%
GCAAGAGCCAAGCCAAATGG+TGG + chr4_1:50812087-50812106 Msa0553540:CDS 55.0%
! TCAAGAAGCGGGCATCGTTC+AGG + chr4_1:50813794-50813813 Msa0553540:CDS 55.0%
GGTGGTCGGGGTTAGAACCT+CGG - chr4_1:50808255-50808274 None:intergenic 60.0%
CGGGGACACCGCCTACAATT+CGG + chr4_1:50811401-50811420 Msa0553540:intron 60.0%
TGGGAAGATCGCGGATCTGC+CGG - chr4_1:50813118-50813137 None:intergenic 60.0%
TAGGCGGTGTCCCCGTTGAG+GGG - chr4_1:50811396-50811415 None:intergenic 65.0%
GTAGGCGGTGTCCCCGTTGA+GGG - chr4_1:50811397-50811416 None:intergenic 65.0%
TGTAGGCGGTGTCCCCGTTG+AGG - chr4_1:50811398-50811417 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 50806138 50813900 50806138 ID=Msa0553540;Name=Msa0553540
chr4_1 mRNA 50806138 50813900 50806138 ID=Msa0553540-mRNA-1;Parent=Msa0553540;Name=Msa0553540-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.25|0.11|1|1|1|9|0|660
chr4_1 exon 50806138 50806303 50806138 ID=Msa0553540-mRNA-1:exon:14384;Parent=Msa0553540-mRNA-1
chr4_1 exon 50809294 50809373 50809294 ID=Msa0553540-mRNA-1:exon:14385;Parent=Msa0553540-mRNA-1
chr4_1 exon 50809768 50810229 50809768 ID=Msa0553540-mRNA-1:exon:14386;Parent=Msa0553540-mRNA-1
chr4_1 exon 50811110 50811232 50811110 ID=Msa0553540-mRNA-1:exon:14387;Parent=Msa0553540-mRNA-1
chr4_1 exon 50811823 50811951 50811823 ID=Msa0553540-mRNA-1:exon:14388;Parent=Msa0553540-mRNA-1
chr4_1 exon 50812062 50812346 50812062 ID=Msa0553540-mRNA-1:exon:14389;Parent=Msa0553540-mRNA-1
chr4_1 exon 50812438 50812710 50812438 ID=Msa0553540-mRNA-1:exon:14390;Parent=Msa0553540-mRNA-1
chr4_1 exon 50813086 50813193 50813086 ID=Msa0553540-mRNA-1:exon:14391;Parent=Msa0553540-mRNA-1
chr4_1 exon 50813544 50813900 50813544 ID=Msa0553540-mRNA-1:exon:14392;Parent=Msa0553540-mRNA-1
chr4_1 CDS 50806138 50806303 50806138 ID=Msa0553540-mRNA-1:cds;Parent=Msa0553540-mRNA-1
chr4_1 CDS 50809294 50809373 50809294 ID=Msa0553540-mRNA-1:cds;Parent=Msa0553540-mRNA-1
chr4_1 CDS 50809768 50810229 50809768 ID=Msa0553540-mRNA-1:cds;Parent=Msa0553540-mRNA-1
chr4_1 CDS 50811110 50811232 50811110 ID=Msa0553540-mRNA-1:cds;Parent=Msa0553540-mRNA-1
chr4_1 CDS 50811823 50811951 50811823 ID=Msa0553540-mRNA-1:cds;Parent=Msa0553540-mRNA-1
chr4_1 CDS 50812062 50812346 50812062 ID=Msa0553540-mRNA-1:cds;Parent=Msa0553540-mRNA-1
chr4_1 CDS 50812438 50812710 50812438 ID=Msa0553540-mRNA-1:cds;Parent=Msa0553540-mRNA-1
chr4_1 CDS 50813086 50813193 50813086 ID=Msa0553540-mRNA-1:cds;Parent=Msa0553540-mRNA-1
chr4_1 CDS 50813544 50813900 50813544 ID=Msa0553540-mRNA-1:cds;Parent=Msa0553540-mRNA-1
Gene Sequence

>Msa0553540

ATGCATCTTGTGTGGGAAGATTTGAGTGTTGTAATTCCAAACTTTGGCAATGGACATACAAGGAGATTGCTTAATGGTTTGAATGGATATGCTGAACCAAACAGAATCATGGCTATTATGGGTCCATCTGGTTCTGGAAAATCTACTCTTCTTGATGCTTTGGCAGGTAGACTCGCTGGAAATGTTATCATGTCTGGTAATGTGCTTTTAAATGGAAAGAAAAGGAGATTAGACTATGGGGTTGTAGCCTATGTGACACAAGAAGACATATTGTTGGGAACACTAACAGTGAGAGAGACAATATCTTACTCAGCAAATTTAAGGCTTCCAGCTACAATGACAAAAGAAGAGGTAAATGACATTGTAGAGGGAACAATTATGGAGATGGGTCTTCAAGATTGTGCTGATAGACTTGTAGGAAATTGGCACTTAAGGGGTATAAGTGGTGGAGAAAAGAAAAGAACTAGCATAGCACTTGAAATTCTTACTAGGCCATGTCTCTTGTTCCTTGATGAGCCAACAAGTGGTTTGGACAGTGCCTCAGCATATTTTGTTGCTCAAACTTTAAGAAACATTGCTCATGATGGGAAAACTGTTATTTCTTCAATTCATCAACCAAGTAGTGAGGTTTTTGCATTATTTGATGATCTCTTTCTACTTTCTGGGGGTCAAACAATTTACTTTGGACCAGCTGAAAATGCAGTTGAGTTTTTTGGCAAAGCAGGATTCCCATGTCCAAGTAGAAGAAACCCTTCAGATCATTTCCTACGTTGTATTAATTCAGACTTTGATACTGTCACAACTACTATGATGACCTCTGGGAGAACACATGAACCAACATTGGCACCATCAACAATGAACTTATCAACAGCAGCAATCAAAGCAATACTCATAGAGAAATACCGTTGGTCAGAATATGCAACTTGTGCAAGAGCAAGAATCAAACAAATCTCAAACTTCGAAGGACATGAATATGAAAGTAAAAGCAAGAGCCAAGCCAAATGGTGGAAGCAACTATCAACTTTGACTCAGAGATCTTTTGTGAACATGTCTAGAGATGTGGGGTACTATTGGATAAGGTTAACAATCTATGTCGCCTTATCTTTGTGTGTCGGAACAATCTTTTATGACGTTGGATCAAGTTATACAGCTATTTTTGCAAGAGGAGCATGTGGCGCTTTTATATCGGGTTTCATGACATTCATGTCCATAGGAGGATTTCCATCATTCATAGAGGAAATGAAGGTCTTCTACAAAGAAAGGCTGAATGGATATTATGGAATTTCAGTCTACATTCTGTCAAATTTTCTCTCTTCATTTCCTTTTGTAGCAGTGATGTCATTTGCTACAGGGTCTATAACATATTACATGGTTAAGTTTCGATCTGAGTTTTCACATCTTTTGTATATCTGTTTGGATCTTTTGGGCTGTATAGCTGTTGTGGAGAGCTCAATGATGATTATAGCTGCATTGGTTCCCAATTTTCTTATGGGATTGATAATTGGAGCAGGTTATATTGGTCTTATGATGATGACTGCTGGCTATTTCCGGCAGATCCGCGATCTTCCCAAATTCTTCTGGCGTTACCCTATTTCATACATCAATTATGGAGCATGGGGATTGCAGGGAGCTTTCAAGAATGATATGATTGGGATGGAGTTTGATCCTAAAGAACCTGGTGACCCAAAACTGAAAGGAGAGATCATCCTCAAAACACTGCTTGGAATGAAAGTTGATTATTCAAAATGGTGGGACCTAGCTGTGGTCATCTTCATCCTCATGTTGCATAGAGTTATTTTCTTCTTCATTCTCAAAATTAAGGAGAGAGTTGTACCTTTCCTTCACAGTATCTACACAAAGCAAACACTGCAACGTATCAAGAAGCGGGCATCGTTCAGGAAAACGCCATCGTTCGCTTCCAAGAGACACCAACCATTGCATCCATTGTCTTCTCAAGAGGGTCTGAACTCTCCATTTCATTAG
Protein sequence

>Msa0553540

MHLVWEDLSVVIPNFGNGHTRRLLNGLNGYAEPNRIMAIMGPSGSGKSTLLDALAGRLAGNVIMSGNVLLNGKKRRLDYGVVAYVTQEDILLGTLTVRETISYSANLRLPATMTKEEVNDIVEGTIMEMGLQDCADRLVGNWHLRGISGGEKKRTSIALEILTRPCLLFLDEPTSGLDSASAYFVAQTLRNIAHDGKTVISSIHQPSSEVFALFDDLFLLSGGQTIYFGPAENAVEFFGKAGFPCPSRRNPSDHFLRCINSDFDTVTTTMMTSGRTHEPTLAPSTMNLSTAAIKAILIEKYRWSEYATCARARIKQISNFEGHEYESKSKSQAKWWKQLSTLTQRSFVNMSRDVGYYWIRLTIYVALSLCVGTIFYDVGSSYTAIFARGACGAFISGFMTFMSIGGFPSFIEEMKVFYKERLNGYYGISVYILSNFLSSFPFVAVMSFATGSITYYMVKFRSEFSHLLYICLDLLGCIAVVESSMMIIAALVPNFLMGLIIGAGYIGLMMMTAGYFRQIRDLPKFFWRYPISYINYGAWGLQGAFKNDMIGMEFDPKEPGDPKLKGEIILKTLLGMKVDYSKWWDLAVVIFILMLHRVIFFFILKIKERVVPFLHSIYTKQTLQRIKKRASFRKTPSFASKRHQPLHPLSSQEGLNSPFH*