AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0687830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0687830 MtrunA17_Chr4g0039261 96.952 689 20 1 1 688 1 689 0.0 1387
Msa0687830 MtrunA17_Chr4g0039251 66.089 693 229 4 1 688 41 732 0.0 937
Msa0687830 MtrunA17_Chr4g0039231 59.877 648 209 2 92 688 1 648 0.0 820
Msa0687830 MtrunA17_Chr6g0477811 54.647 624 281 2 30 653 46 667 0.0 706
Msa0687830 MtrunA17_Chr4g0050251 46.368 647 327 5 5 642 23 658 0.0 599
Msa0687830 MtrunA17_Chr4g0050261 44.787 681 335 6 5 645 23 702 0.0 589
Msa0687830 MtrunA17_Chr4g0050291 45.963 644 325 7 21 652 18 650 0.0 582
Msa0687830 MtrunA17_Chr4g0050221 42.338 633 342 7 23 649 5 620 9.35e-177 518
Msa0687830 MtrunA17_Chr4g0026731 44.463 596 292 7 84 651 12 596 2.43e-175 513
Msa0687830 MtrunA17_Chr4g0050201 39.892 554 310 7 93 640 4 540 1.51e-142 427
Msa0687830 MtrunA17_Chr2g0327241 36.244 607 374 8 28 632 104 699 7.78e-122 379
Msa0687830 MtrunA17_Chr1g0208391 31.993 597 361 15 3 583 45 612 8.67e-85 282
Msa0687830 MtrunA17_Chr1g0176451 31.099 537 342 10 38 564 10 528 1.05e-75 254
Msa0687830 MtrunA17_Chr7g0263351 30.836 574 366 9 25 587 105 658 3.22e-74 254
Msa0687830 MtrunA17_Chr1g0176441 30.182 550 357 11 29 564 147 683 5.69e-73 250
Msa0687830 MtrunA17_Chr1g0213091 30.769 533 352 5 47 564 118 648 3.59e-72 248
Msa0687830 MtrunA17_Chr7g0267971 29.677 620 392 14 29 633 136 726 6.78e-72 247
Msa0687830 MtrunA17_Chr5g0408061 30.478 607 374 15 45 633 59 635 2.39e-71 244
Msa0687830 MtrunA17_Chr1g0200651 35.683 454 251 10 49 485 88 517 3.40e-70 241
Msa0687830 MtrunA17_Chr1g0198931 29.770 608 370 18 48 633 104 676 4.81e-69 238
Msa0687830 MtrunA17_Chr3g0102731 33.868 561 314 18 7 547 65 588 8.72e-67 230
Msa0687830 MtrunA17_Chr5g0446901 30.824 558 340 10 7 547 75 603 1.55e-66 230
Msa0687830 MtrunA17_Chr8g0359931 31.179 526 317 13 49 564 64 554 1.22e-65 228
Msa0687830 MtrunA17_Chr8g0384391 30.083 605 393 11 44 635 49 636 1.22e-65 228
Msa0687830 MtrunA17_Chr2g0316301 30.653 597 363 15 48 632 70 627 9.65e-63 220
Msa0687830 MtrunA17_Chr3g0130331 28.571 602 400 14 46 635 53 636 1.93e-61 217
Msa0687830 MtrunA17_Chr2g0318061 33.957 374 205 8 49 410 29 372 2.85e-61 209
Msa0687830 MtrunA17_Chr7g0264441 45.041 242 129 3 46 284 274 514 7.43e-56 204
Msa0687830 MtrunA17_Chr1g0202431 26.858 592 383 12 51 632 50 601 1.14e-54 197
Msa0687830 MtrunA17_Chr1g0180971 39.661 295 161 6 2 284 359 648 5.74e-54 198
Msa0687830 MtrunA17_Chr7g0262241 28.007 607 385 15 51 641 880 1450 8.09e-54 200
Msa0687830 MtrunA17_Chr7g0262241 25.368 611 393 14 51 618 162 752 4.97e-46 177
Msa0687830 MtrunA17_Chr2g0331081 28.411 535 337 12 50 565 890 1397 9.26e-54 200
Msa0687830 MtrunA17_Chr2g0331081 26.981 593 318 18 43 561 167 718 4.34e-44 171
Msa0687830 MtrunA17_Chr8g0340651 29.368 538 328 13 50 565 904 1411 4.40e-53 198
Msa0687830 MtrunA17_Chr8g0340651 34.237 295 155 6 36 292 159 452 7.73e-42 164
Msa0687830 MtrunA17_Chr1g0199471 37.895 285 168 5 4 284 473 752 8.79e-53 197
Msa0687830 MtrunA17_Chr4g0003981 28.893 533 335 14 51 565 866 1372 8.31e-52 194
Msa0687830 MtrunA17_Chr4g0003981 26.052 618 400 15 51 628 173 773 3.08e-43 168
Msa0687830 MtrunA17_Chr4g0003971 27.512 607 377 15 10 581 769 1347 1.11e-51 194
Msa0687830 MtrunA17_Chr4g0003971 26.122 624 400 16 51 632 161 765 2.24e-41 162
Msa0687830 MtrunA17_Chr7g0261971 27.642 615 377 18 51 641 875 1445 2.63e-51 192
Msa0687830 MtrunA17_Chr7g0261971 25.210 595 378 14 51 600 158 730 1.06e-45 176
Msa0687830 MtrunA17_Chr7g0261951 27.273 616 378 17 51 641 879 1449 3.80e-51 192
Msa0687830 MtrunA17_Chr7g0261951 26.589 598 366 16 51 600 162 734 3.27e-46 177
Msa0687830 MtrunA17_Chr7g0262221 28.151 611 380 17 51 635 854 1431 4.37e-51 192
Msa0687830 MtrunA17_Chr7g0262221 26.886 517 337 12 51 543 163 662 3.68e-45 174
Msa0687830 MtrunA17_Chr8g0393191 42.510 247 138 3 51 295 69 313 2.24e-50 188
Msa0687830 MtrunA17_Chr8g0393191 25.256 293 191 8 363 633 523 809 4.55e-18 89.0
Msa0687830 MtrunA17_Chr3g0138261 27.061 643 391 18 26 631 831 1432 5.13e-50 189
Msa0687830 MtrunA17_Chr3g0138261 27.379 599 360 16 51 600 166 738 1.58e-45 175
Msa0687830 MtrunA17_Chr4g0065231 25.251 598 407 13 47 635 71 637 5.63e-50 185
Msa0687830 MtrunA17_Chr1g0148841 28.547 585 334 20 26 565 838 1383 5.80e-50 189
Msa0687830 MtrunA17_Chr1g0148841 27.360 625 393 15 51 633 166 771 4.49e-46 177
Msa0687830 MtrunA17_Chr7g0262261 26.626 661 425 18 24 651 762 1395 3.56e-49 186
Msa0687830 MtrunA17_Chr7g0262261 26.094 594 374 17 51 600 133 705 1.78e-44 172
Msa0687830 MtrunA17_Chr7g0262251 28.417 556 328 15 51 571 827 1347 4.58e-49 186
Msa0687830 MtrunA17_Chr7g0262251 26.058 591 396 14 51 618 175 747 2.28e-45 175
Msa0687830 MtrunA17_Chr2g0332211 27.391 617 347 18 2 565 877 1445 9.94e-49 185
Msa0687830 MtrunA17_Chr2g0332211 26.690 562 344 14 51 565 248 788 4.22e-45 174
Msa0687830 MtrunA17_Chr2g0332241 28.022 546 323 16 51 565 856 1362 1.90e-48 184
Msa0687830 MtrunA17_Chr2g0332241 26.215 576 354 15 51 579 167 718 8.20e-45 173
Msa0687830 MtrunA17_Chr2g0332221 27.899 595 329 17 24 565 814 1361 3.20e-48 183
Msa0687830 MtrunA17_Chr2g0332221 26.170 577 353 17 51 579 167 718 1.33e-43 169
Msa0687830 MtrunA17_Chr4g0028621 41.313 259 144 4 29 284 489 742 3.27e-48 183
Msa0687830 MtrunA17_Chr7g0262231 27.239 536 346 12 51 571 883 1389 1.66e-47 181
Msa0687830 MtrunA17_Chr7g0262231 25.311 644 411 16 51 651 162 778 3.76e-46 177
Msa0687830 MtrunA17_Chr3g0104621 26.901 684 403 25 3 634 704 1342 1.72e-47 181
Msa0687830 MtrunA17_Chr3g0104621 26.810 649 399 17 47 646 52 673 2.77e-46 177
Msa0687830 MtrunA17_Chr5g0429871 26.929 635 375 20 3 588 596 1190 3.09e-47 180
Msa0687830 MtrunA17_Chr5g0429871 24.088 548 295 18 111 579 40 545 2.90e-32 134
Msa0687830 MtrunA17_Chr5g0411621 42.500 240 134 3 51 288 51 288 8.08e-47 177
Msa0687830 MtrunA17_Chr5g0411621 22.761 268 201 4 370 637 462 723 5.03e-16 82.0
Msa0687830 MtrunA17_Chr1g0171351 26.627 676 392 21 11 635 839 1461 2.44e-46 177
Msa0687830 MtrunA17_Chr1g0171351 25.990 631 397 14 50 632 175 783 7.69e-42 164
Msa0687830 MtrunA17_Chr7g0265991 26.224 633 368 16 26 603 20 608 2.57e-46 174
Msa0687830 MtrunA17_Chr7g0265981 26.003 623 361 18 8 575 822 1399 8.09e-45 173
Msa0687830 MtrunA17_Chr7g0265981 26.719 640 383 19 50 634 183 791 1.47e-41 163
Msa0687830 MtrunA17_Chr7g0261981 26.544 599 365 17 51 600 162 734 9.48e-45 173
Msa0687830 MtrunA17_Chr7g0261981 26.316 608 368 18 51 641 861 1405 1.21e-42 166
Msa0687830 MtrunA17_Chr1g0198291 26.531 588 360 16 50 608 893 1437 1.00e-44 173
Msa0687830 MtrunA17_Chr1g0198291 27.205 669 409 22 50 669 188 827 8.21e-43 167
Msa0687830 MtrunA17_Chr7g0265961 25.318 628 393 17 50 632 181 777 1.60e-44 172
Msa0687830 MtrunA17_Chr7g0265961 25.279 538 343 12 45 565 825 1320 1.66e-34 141
Msa0687830 MtrunA17_Chr7g0265971 26.903 565 341 14 50 565 177 718 2.49e-44 171
Msa0687830 MtrunA17_Chr7g0265971 25.637 589 324 16 50 578 874 1408 1.93e-40 159
Msa0687830 MtrunA17_Chr0c20g0493841 25.738 610 383 16 44 628 851 1415 2.87e-44 171
Msa0687830 MtrunA17_Chr0c20g0493841 35.612 278 140 8 51 292 168 442 6.19e-39 155
Msa0687830 MtrunA17_Chr4g0004021 26.198 626 397 16 51 632 171 775 2.35e-43 168
Msa0687830 MtrunA17_Chr4g0004021 29.062 437 269 13 51 473 863 1272 2.29e-41 162
Msa0687830 MtrunA17_Chr1g0148811 27.190 662 396 24 6 632 802 1412 4.56e-43 167
Msa0687830 MtrunA17_Chr1g0148811 36.462 277 139 8 51 292 154 428 1.90e-36 147
Msa0687830 MtrunA17_Chr4g0062871 25.823 577 378 11 50 608 843 1387 1.22e-42 166
Msa0687830 MtrunA17_Chr4g0062871 26.582 632 388 18 51 632 150 755 1.45e-38 154
Msa0687830 MtrunA17_Chr7g0266001 26.521 641 391 17 50 637 62 675 8.96e-42 162
Msa0687830 MtrunA17_Chr3g0093331 35.124 242 152 3 71 308 18 258 3.78e-34 131
Msa0687830 MtrunA17_Chr7g0262321 37.963 216 129 4 46 258 563 776 1.06e-33 138
Msa0687830 MtrunA17_Chr7g0262321 39.855 138 79 4 157 292 24 159 3.12e-22 102
Msa0687830 MtrunA17_Chr4g0069211 36.620 213 132 2 44 254 839 1050 1.27e-33 138
Msa0687830 MtrunA17_Chr4g0069211 32.975 279 135 10 51 292 167 430 3.92e-32 133
Msa0687830 MtrunA17_Chr6g0472481 34.529 223 130 3 51 258 13 234 2.75e-33 129
Msa0687830 MtrunA17_Chr4g0039221 77.586 58 13 0 29 86 7 64 2.66e-24 97.1
Msa0687830 MtrunA17_Chr7g0215001 26.196 397 227 15 198 557 1 368 1.97e-20 94.0
Msa0687830 MtrunA17_Chr7g0249091 30.472 233 127 8 49 257 98 319 2.24e-18 87.4
Msa0687830 MtrunA17_Chr4g0047831 50.000 78 39 0 172 249 6 83 8.74e-18 79.0
Msa0687830 MtrunA17_Chr4g0050191 51.807 83 33 4 4 84 15 92 7.53e-16 73.9
Msa0687830 MtrunA17_Chr7g0257321 55.357 56 22 1 29 84 1 53 7.54e-15 69.7
Msa0687830 MtrunA17_Chr1g0178481 31.401 207 129 6 51 252 396 594 1.96e-14 77.0
Msa0687830 MtrunA17_Chr3g0093041 25.991 227 149 6 62 282 206 419 5.81e-14 75.5
Msa0687830 MtrunA17_Chr7g0227391 29.204 226 131 10 51 263 442 651 7.40e-14 75.1
Msa0687830 MtrunA17_Chr4g0041871 32.653 196 109 9 51 236 1023 1205 1.99e-13 74.3
Msa0687830 MtrunA17_Chr4g0061601 28.319 226 140 8 51 267 404 616 5.85e-13 72.0
Msa0687830 MtrunA17_Chr1g0194031 31.551 187 108 8 51 228 401 576 1.11e-12 71.6
Msa0687830 MtrunA17_Chr5g0410921 28.571 266 163 11 3 261 333 578 1.19e-12 71.6
Msa0687830 MtrunA17_Chr3g0132711 25.926 216 140 7 62 271 220 421 1.19e-12 71.2
Msa0687830 MtrunA17_Chr7g0257341 32.738 168 98 5 52 215 573 729 1.21e-12 71.6
Msa0687830 MtrunA17_Chr7g0257341 23.413 252 179 5 21 268 1448 1689 2.17e-11 67.8
Msa0687830 MtrunA17_Chr5g0433051 29.279 222 132 9 49 260 479 685 1.86e-12 70.9
Msa0687830 MtrunA17_Chr1g0193991 31.016 187 109 8 51 228 406 581 3.36e-12 70.1
Msa0687830 MtrunA17_Chr6g0452141 30.374 214 126 8 51 251 1034 1237 3.93e-12 70.1
Msa0687830 MtrunA17_Chr7g0238421 30.612 147 90 4 61 205 14 150 4.61e-12 66.2
Msa0687830 MtrunA17_Chr4g0026741 39.535 86 52 0 1 86 19 104 8.04e-12 63.5
Msa0687830 MtrunA17_Chr6g0451881 30.841 214 125 8 51 251 1024 1227 8.84e-12 68.9
Msa0687830 MtrunA17_Chr6g0452111 31.156 199 126 6 60 251 1044 1238 1.10e-11 68.6
Msa0687830 MtrunA17_Chr3g0119381 34.118 170 96 7 66 228 431 591 1.29e-11 68.2
Msa0687830 MtrunA17_Chr6g0452071 30.374 214 126 8 51 251 230 433 1.38e-11 67.4
Msa0687830 MtrunA17_Chr6g0452041 30.374 214 126 8 51 251 1036 1239 1.56e-11 68.2
Msa0687830 MtrunA17_Chr5g0412741 29.555 247 143 10 48 281 470 698 1.76e-11 67.4
Msa0687830 MtrunA17_Chr6g0452171 31.034 203 123 8 51 243 1037 1232 1.82e-11 67.8
Msa0687830 MtrunA17_Chr6g0481921 31.343 201 115 8 66 257 303 489 2.10e-11 67.8
Msa0687830 MtrunA17_Chr8g0341761 28.218 202 117 6 65 261 627 805 2.28e-11 67.4
Msa0687830 MtrunA17_Chr3g0128381 31.844 179 104 8 48 218 404 572 2.74e-11 67.0
Msa0687830 MtrunA17_Chr2g0285191 30.851 188 110 8 50 228 414 590 2.77e-11 67.4
Msa0687830 MtrunA17_Chr4g0069401 31.720 186 109 7 51 228 390 565 4.90e-11 66.6
Msa0687830 MtrunA17_Chr3g0138211 32.203 177 105 7 66 236 428 595 4.95e-11 66.6
Msa0687830 MtrunA17_Chr8g0353781 27.317 205 121 6 65 264 630 811 5.28e-11 66.2
Msa0687830 MtrunA17_Chr8g0341751 28.000 200 120 6 65 261 455 633 5.35e-11 66.2
Msa0687830 MtrunA17_Chr2g0285311 31.183 186 112 7 50 228 385 561 6.26e-11 66.2
Msa0687830 MtrunA17_Chr4g0069361 31.183 186 110 8 51 228 395 570 8.11e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0687830 AT3G21090.1 66.866 670 214 2 27 688 21 690 0.0 967
Msa0687830 AT1G51500.1 67.216 668 213 4 27 688 20 687 0.0 930
Msa0687830 AT1G51460.1 63.569 678 236 1 22 688 1 678 0.0 904
Msa0687830 AT1G17840.1 54.259 634 284 4 30 663 49 676 0.0 683
Msa0687830 AT2G28070.2 35.691 608 379 7 28 633 111 708 2.65e-122 381
Msa0687830 AT2G28070.1 35.691 608 379 7 28 633 111 708 2.65e-122 381
Msa0687830 AT2G01320.8 31.795 585 368 11 25 600 64 626 3.36e-89 292
Msa0687830 AT2G01320.5 31.795 585 368 11 25 600 64 626 3.36e-89 292
Msa0687830 AT2G01320.3 32.423 586 364 13 25 601 64 626 8.52e-89 293
Msa0687830 AT2G01320.2 32.423 586 364 13 25 601 64 626 9.16e-89 293
Msa0687830 AT2G01320.1 32.423 586 364 13 25 601 64 626 1.21e-88 293
Msa0687830 AT2G01320.4 32.423 586 364 13 25 601 64 626 1.21e-88 293
Msa0687830 AT2G01320.7 34.382 477 288 8 25 494 64 522 1.23e-82 271
Msa0687830 AT2G01320.6 34.382 477 288 8 25 494 64 522 1.23e-82 271
Msa0687830 AT2G39350.1 31.667 540 335 6 48 564 106 634 1.48e-76 260
Msa0687830 AT3G55100.1 30.427 539 352 9 46 576 42 565 4.80e-74 252
Msa0687830 AT3G55100.2 30.427 539 352 9 46 576 42 565 4.80e-74 252
Msa0687830 AT3G55110.1 31.166 523 344 6 49 564 89 602 1.17e-73 252
Msa0687830 AT3G55090.1 30.241 539 342 8 48 564 104 630 4.20e-73 251
Msa0687830 AT2G37360.1 28.754 626 408 11 47 637 129 751 1.12e-72 250
Msa0687830 AT5G06530.2 31.204 548 334 12 38 564 166 691 3.48e-72 249
Msa0687830 AT5G06530.1 31.204 548 334 12 38 564 166 691 3.48e-72 249
Msa0687830 AT1G71960.1 36.486 444 265 9 49 489 81 510 3.50e-72 247
Msa0687830 AT1G31770.1 32.397 534 311 13 49 564 79 580 4.32e-72 246
Msa0687830 AT5G06530.3 31.250 528 327 10 38 544 166 678 4.14e-71 244
Msa0687830 AT3G55130.1 30.085 585 368 13 45 610 94 656 4.38e-71 245
Msa0687830 AT3G25620.2 30.288 591 360 14 3 564 40 607 9.14e-71 243
Msa0687830 AT5G13580.1 31.767 532 339 6 45 564 102 621 2.43e-70 243
Msa0687830 AT3G53510.1 29.571 629 390 12 47 637 122 735 1.30e-67 236
Msa0687830 AT4G27420.1 31.792 519 299 14 1 494 8 496 3.42e-67 233
Msa0687830 AT5G06530.4 31.526 498 305 10 68 544 1 483 2.23e-66 227
Msa0687830 AT3G25620.1 34.579 428 236 10 3 404 40 449 3.43e-64 220
Msa0687830 AT3G13220.1 32.276 536 319 15 49 565 104 614 4.69e-64 225
Msa0687830 AT2G13610.1 26.856 633 430 13 17 635 25 638 1.22e-63 223
Msa0687830 AT1G53270.1 28.830 607 359 16 41 632 33 581 4.80e-60 212
Msa0687830 AT4G25750.1 26.734 591 372 14 51 632 30 568 1.46e-56 202
Msa0687830 AT5G19410.1 26.853 607 391 14 36 632 52 615 2.35e-55 200
Msa0687830 AT5G19410.2 26.853 607 391 14 36 632 61 624 2.75e-55 200
Msa0687830 AT2G29940.1 30.130 614 353 21 8 587 804 1375 5.19e-55 204
Msa0687830 AT2G29940.1 24.648 568 357 12 47 565 171 716 3.95e-45 174
Msa0687830 AT5G52860.1 27.517 596 359 16 51 632 44 580 2.29e-54 196
Msa0687830 AT1G59870.1 28.028 578 350 14 24 565 853 1400 3.13e-54 202
Msa0687830 AT1G59870.1 26.379 580 349 13 42 569 177 730 1.51e-43 169
Msa0687830 AT1G15210.1 28.391 553 345 15 35 565 850 1373 5.27e-54 201
Msa0687830 AT1G15210.1 34.420 276 146 5 51 292 184 458 2.28e-40 160
Msa0687830 AT1G53390.1 37.829 304 176 6 3 302 478 772 1.54e-53 199
Msa0687830 AT1G15520.1 27.807 579 346 16 26 565 813 1358 3.38e-53 199
Msa0687830 AT1G15520.1 29.340 576 333 18 39 565 159 709 7.60e-51 192
Msa0687830 AT4G15230.4 26.123 601 388 17 45 627 742 1304 1.53e-52 197
Msa0687830 AT4G15230.4 24.919 618 387 17 1 565 26 619 3.01e-48 184
Msa0687830 AT4G15230.3 26.123 601 388 17 45 627 821 1383 1.85e-52 197
Msa0687830 AT4G15230.3 24.919 618 387 17 1 565 105 698 3.23e-48 184
Msa0687830 AT4G15230.1 26.123 601 388 17 45 627 821 1383 1.85e-52 197
Msa0687830 AT4G15230.1 24.919 618 387 17 1 565 105 698 3.23e-48 184
Msa0687830 AT2G37010.2 37.075 294 168 8 2 284 448 735 2.21e-52 196
Msa0687830 AT2G37010.1 37.075 294 168 8 2 284 448 735 2.21e-52 196
Msa0687830 AT4G15215.11 26.833 600 385 17 45 627 818 1380 4.97e-52 195
Msa0687830 AT4G15215.11 26.064 564 347 15 51 565 153 695 8.73e-47 179
Msa0687830 AT4G15215.8 26.833 600 385 17 45 627 808 1370 5.32e-52 195
Msa0687830 AT4G15215.8 26.418 564 338 16 51 565 150 685 2.20e-46 178
Msa0687830 AT4G15215.10 26.833 600 385 17 45 627 808 1370 5.32e-52 195
Msa0687830 AT4G15215.10 26.418 564 338 16 51 565 150 685 2.20e-46 178
Msa0687830 AT4G15215.6 26.833 600 385 17 45 627 808 1370 5.32e-52 195
Msa0687830 AT4G15215.6 26.418 564 338 16 51 565 150 685 2.20e-46 178
Msa0687830 AT4G15215.7 26.833 600 385 17 45 627 808 1370 5.32e-52 195
Msa0687830 AT4G15215.7 26.418 564 338 16 51 565 150 685 2.20e-46 178
Msa0687830 AT4G15215.9 26.833 600 385 17 45 627 815 1377 5.70e-52 195
Msa0687830 AT4G15215.9 26.064 564 347 15 51 565 150 692 8.33e-47 179
Msa0687830 AT4G15215.4 26.833 600 385 17 45 627 815 1377 5.70e-52 195
Msa0687830 AT4G15215.4 26.064 564 347 15 51 565 150 692 8.33e-47 179
Msa0687830 AT4G15215.5 26.833 600 385 17 45 627 815 1377 5.70e-52 195
Msa0687830 AT4G15215.5 26.064 564 347 15 51 565 150 692 8.33e-47 179
Msa0687830 AT4G15215.3 26.833 600 385 17 45 627 815 1377 5.70e-52 195
Msa0687830 AT4G15215.3 26.064 564 347 15 51 565 150 692 8.33e-47 179
Msa0687830 AT4G15215.2 26.833 600 385 17 45 627 815 1377 5.70e-52 195
Msa0687830 AT4G15215.2 26.064 564 347 15 51 565 150 692 8.33e-47 179
Msa0687830 AT4G15215.1 26.833 600 385 17 45 627 811 1373 6.12e-52 195
Msa0687830 AT4G15215.1 26.418 564 338 16 51 565 153 688 2.43e-46 178
Msa0687830 AT3G16340.2 27.482 564 358 13 50 593 835 1367 2.21e-51 193
Msa0687830 AT3G16340.2 28.060 531 303 15 18 500 136 635 1.35e-44 173
Msa0687830 AT3G16340.1 27.482 564 358 13 50 593 840 1372 2.41e-51 193
Msa0687830 AT3G16340.1 27.925 530 310 13 18 500 136 640 6.94e-46 177
Msa0687830 AT1G15520.2 29.463 577 331 19 39 565 159 709 5.18e-51 192
Msa0687830 AT1G15520.2 29.832 476 266 15 26 466 813 1255 4.11e-44 171
Msa0687830 AT4G15236.1 26.494 619 382 18 45 634 811 1385 4.58e-50 189
Msa0687830 AT4G15236.1 25.000 564 353 15 51 565 153 695 8.65e-42 164
Msa0687830 AT3G30842.1 29.250 547 321 18 51 571 848 1354 5.23e-50 189
Msa0687830 AT3G30842.1 25.986 558 352 15 51 563 161 702 1.42e-43 169
Msa0687830 AT4G15233.3 25.827 635 397 19 29 634 736 1325 1.42e-49 188
Msa0687830 AT4G15233.3 25.213 587 364 16 32 565 71 635 2.05e-44 172
Msa0687830 AT4G15233.6 25.827 635 397 19 29 634 736 1325 1.42e-49 188
Msa0687830 AT4G15233.6 25.213 587 364 16 32 565 71 635 2.05e-44 172
Msa0687830 AT4G15233.1 25.669 635 398 18 29 634 798 1387 2.08e-49 187
Msa0687830 AT4G15233.1 25.213 587 364 16 32 565 133 697 2.63e-44 172
Msa0687830 AT4G15233.7 25.669 635 398 18 29 634 780 1369 2.47e-49 187
Msa0687830 AT4G15233.7 26.186 569 363 16 32 565 133 679 3.44e-46 177
Msa0687830 AT4G15233.8 25.669 635 398 18 29 634 789 1378 2.48e-49 187
Msa0687830 AT4G15233.8 24.829 584 361 16 32 565 133 688 2.09e-40 160
Msa0687830 AT3G53480.1 25.899 556 361 13 35 571 860 1383 2.78e-49 187
Msa0687830 AT3G53480.1 26.142 635 384 19 51 632 189 791 1.44e-46 179
Msa0687830 AT2G37280.1 26.087 552 359 12 44 576 830 1351 2.99e-49 187
Msa0687830 AT2G37280.1 24.411 721 470 16 1 674 99 791 5.77e-48 183
Msa0687830 AT2G37280.4 26.087 552 359 12 44 576 672 1193 3.50e-49 186
Msa0687830 AT2G37280.4 25.115 653 423 14 62 674 7 633 4.60e-45 174
Msa0687830 AT5G60740.1 40.143 279 158 5 26 300 493 766 3.68e-49 186
Msa0687830 AT2G37280.3 26.087 552 359 12 44 576 859 1380 4.22e-49 186
Msa0687830 AT2G37280.3 23.600 750 469 17 1 674 99 820 3.37e-43 168
Msa0687830 AT4G15230.2 26.577 523 336 14 45 548 821 1314 1.47e-48 185
Msa0687830 AT4G15230.2 24.919 618 387 17 1 565 105 698 4.08e-48 183
Msa0687830 AT2G37280.2 24.411 721 470 16 1 674 99 791 8.24e-48 182
Msa0687830 AT2G37280.2 26.012 519 339 10 44 544 830 1321 6.12e-47 180
Msa0687830 AT4G15233.5 25.341 659 417 19 7 634 630 1244 3.23e-47 181
Msa0687830 AT4G15233.5 26.186 569 363 16 32 565 71 617 3.84e-46 177
Msa0687830 AT4G15233.4 25.341 659 417 19 7 634 630 1244 3.23e-47 181
Msa0687830 AT4G15233.4 26.186 569 363 16 32 565 71 617 3.84e-46 177
Msa0687830 AT2G26910.1 26.589 598 394 14 50 631 844 1412 1.40e-46 179
Msa0687830 AT2G26910.1 27.182 699 403 24 19 657 128 780 2.08e-41 163
Msa0687830 AT1G66950.1 25.910 687 399 19 1 632 811 1442 3.35e-46 177
Msa0687830 AT1G66950.1 28.391 553 319 17 50 543 189 723 7.61e-44 171
Msa0687830 AT4G15233.2 26.151 543 332 16 29 543 798 1299 1.18e-44 173
Msa0687830 AT4G15233.2 25.213 587 364 16 32 565 133 697 2.17e-44 172
Msa0687830 AT2G36380.1 25.588 680 406 19 1 630 810 1439 4.52e-43 168
Msa0687830 AT2G36380.1 26.375 618 347 17 50 600 187 763 3.07e-42 166
Msa0687830 AT3G21080.1 40.136 147 79 3 507 648 105 247 4.10e-26 108
Msa0687830 AT5G58270.1 30.435 230 136 11 49 270 492 705 3.63e-15 79.7
Msa0687830 AT5G61700.2 26.066 211 139 5 28 232 592 791 1.54e-14 77.8
Msa0687830 AT5G61700.4 26.066 211 139 5 28 232 592 791 1.54e-14 77.8
Msa0687830 AT3G47780.1 23.552 259 180 6 1 254 586 831 3.05e-14 77.0
Msa0687830 AT4G28620.1 29.461 241 143 11 42 270 440 665 2.07e-13 74.3
Msa0687830 AT2G41700.1 33.136 169 96 6 52 215 568 724 2.54e-13 74.3
Msa0687830 AT2G41700.2 33.136 169 96 6 52 215 498 654 2.58e-13 74.3
Msa0687830 AT5G61700.1 24.464 233 159 5 28 254 592 813 2.64e-13 73.9
Msa0687830 AT5G61740.3 23.077 260 180 6 1 254 421 666 3.78e-13 73.6
Msa0687830 AT3G47730.1 26.923 208 131 7 52 252 547 740 4.21e-13 73.6
Msa0687830 AT5G39040.1 29.091 220 146 7 51 267 413 625 4.23e-13 73.2
Msa0687830 AT3G47750.1 25.581 215 140 6 1 209 588 788 4.81e-13 73.2
Msa0687830 AT4G25960.1 30.568 229 122 10 51 263 418 625 5.44e-13 73.2
Msa0687830 AT5G61740.1 23.077 260 180 6 1 254 560 805 5.64e-13 73.2
Msa0687830 AT5G61740.2 23.077 260 180 6 1 254 526 771 5.98e-13 72.8
Msa0687830 AT4G28630.1 26.103 272 173 11 4 268 414 664 8.80e-13 72.0
Msa0687830 AT1G10680.2 31.390 223 128 11 51 263 378 585 9.11e-13 72.4
Msa0687830 AT1G10680.1 31.390 223 128 11 51 263 378 585 1.09e-12 72.4
Msa0687830 AT3G47760.1 24.164 269 181 9 21 282 564 816 1.14e-12 72.0
Msa0687830 AT3G47760.3 23.611 288 196 9 1 282 587 856 1.28e-12 72.0
Msa0687830 AT3G47760.2 23.881 268 183 8 21 282 574 826 2.11e-12 71.2
Msa0687830 AT4G18050.1 31.771 192 103 8 50 228 371 547 4.38e-12 70.5
Msa0687830 AT4G18050.2 31.771 192 103 8 50 228 381 557 4.71e-12 70.1
Msa0687830 AT1G70610.2 29.150 247 144 10 51 284 291 519 6.74e-12 68.9
Msa0687830 AT3G47740.1 24.638 276 183 9 1 270 583 839 8.80e-12 69.3
Msa0687830 AT2G47000.4 29.255 188 115 7 49 228 399 576 1.24e-11 68.9
Msa0687830 AT1G70610.1 29.150 247 144 10 51 284 472 700 1.33e-11 68.6
Msa0687830 AT2G47000.3 29.255 188 115 7 49 228 399 576 1.55e-11 68.6
Msa0687830 AT2G47000.7 29.255 188 115 7 49 228 399 576 1.55e-11 68.6
Msa0687830 AT2G47000.2 29.255 188 115 7 49 228 399 576 1.95e-11 68.2
Msa0687830 AT5G61730.2 26.263 198 125 7 62 252 559 742 2.11e-11 67.8
Msa0687830 AT5G61730.1 26.263 198 125 7 62 252 549 732 2.12e-11 67.8
Msa0687830 AT2G36910.1 30.415 217 123 8 50 246 384 592 2.54e-11 67.8
Msa0687830 AT2G47000.6 29.255 188 115 7 49 228 399 576 3.06e-11 67.4
Msa0687830 AT2G47000.5 29.255 188 115 7 49 228 399 576 3.06e-11 67.4
Msa0687830 AT2G47000.1 29.255 188 115 7 49 228 399 576 3.06e-11 67.4
Msa0687830 AT5G61690.2 26.263 198 125 7 62 252 558 741 5.66e-11 66.6
Msa0687830 AT3G28390.1 31.132 212 115 8 60 257 1006 1200 5.83e-11 66.6

Find 146 sgRNAs with CRISPR-Local

Find 469 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGATCTCTTTCTACTTTC+TGG 0.049597 4_4:+52816816 Msa0687830:CDS
TATCTTACTCAGCAAATTTA+AGG 0.112967 4_4:+52816475 Msa0687830:CDS
GTATATCTGTTTGGATCTTT+TGG 0.125824 4_4:+52819244 Msa0687830:CDS
TATCAATCCCATAAGAAAAT+TGG 0.159532 4_4:-52819318 None:intergenic
CCTATTTCATACATCAATTA+TGG 0.174076 4_4:+52819803 Msa0687830:CDS
ATGATCTCTCCTTTCAGTTT+TGG 0.182435 4_4:-52820249 None:intergenic
CCATAATTGATGTATGAAAT+AGG 0.185361 4_4:-52819803 None:intergenic
CTTCTTCATTCTCAAAATTA+AGG 0.199958 4_4:+52820365 Msa0687830:CDS
AAACAGAATCATGGCTATTA+TGG 0.202628 4_4:+52812558 Msa0687830:CDS
TTTCTTATGGGATTGATAAT+TGG 0.208330 4_4:+52819323 Msa0687830:CDS
GATTGTGCTGATAGACTTAT+AGG 0.240838 4_4:+52816570 Msa0687830:CDS
TTTGGGTCACCAGGTTCTTT+AGG 0.260950 4_4:-52820231 None:intergenic
GAAAGGCTGAATGGATATTA+TGG 0.270721 4_4:+52819098 Msa0687830:CDS
ATGATCTCTTTCTACTTTCT+GGG 0.279513 4_4:+52816817 Msa0687830:CDS
TGATGACTGCTGGCTATTTC+CGG 0.281301 4_4:+52819744 Msa0687830:CDS
CTGATAGACTTATAGGAAAT+TGG 0.300345 4_4:+52816577 Msa0687830:CDS
TGAAAGTTGATTATTCAAAA+TGG 0.302081 4_4:+52820292 Msa0687830:CDS
AGGGTAACGCCAGAAGAATT+TGG 0.305788 4_4:-52819783 None:intergenic
GAACCTCTCATCATTGCAAT+AGG 0.307731 4_4:-52812427 None:intergenic
GCGATCTTCCCAAATTCTTC+TGG 0.328013 4_4:+52819774 Msa0687830:CDS
CATACAAGGAGATTGCTTAA+TGG 0.333505 4_4:+52812514 Msa0687830:CDS
CATTGTAGAGGGAACAATTA+TGG 0.335544 4_4:+52816533 Msa0687830:CDS
TCAAGAAGCGGGCATCGTTC+AGG 0.337104 4_4:+52820442 Msa0687830:CDS
ATCTACTCTTCTTGATGCTT+TGG 0.337158 4_4:+52812600 Msa0687830:CDS
GTTGATAAGTTCATTGTTGA+TGG 0.344203 4_4:-52818486 None:intergenic
GTATGTCCATTGCCAAAGTT+TGG 0.345171 4_4:-52812496 None:intergenic
TTATAGGAAATTGGCACTTA+AGG 0.346596 4_4:+52816586 Msa0687830:CDS
CTAGAGATGTGGGGTACTAT+TGG 0.376833 4_4:+52818801 Msa0687830:CDS
TGATAGTTGCTTCCACCATT+TGG 0.376863 4_4:-52818747 None:intergenic
TATAGGAAATTGGCACTTAA+GGG 0.378569 4_4:+52816587 Msa0687830:CDS
TTATGGAGCATGGGGATTGC+AGG 0.379390 4_4:+52819820 Msa0687830:CDS
ATTATGGGTCCATCTGGTTC+TGG 0.380004 4_4:+52812574 Msa0687830:CDS
ACAATGCAATTCTAATGAAA+TGG 0.387638 4_4:-52820537 None:intergenic
CATAATTGATGTATGAAATA+GGG 0.391239 4_4:-52819802 None:intergenic
TCTGAAGGGTTTCTTCTACT+TGG 0.393827 4_4:-52817784 None:intergenic
ATCAATCCCATAAGAAAATT+GGG 0.394919 4_4:-52819317 None:intergenic
ATAATAGCCATGATTCTGTT+TGG 0.395034 4_4:-52812556 None:intergenic
TTCATTTCCTCTATGAATGA+TGG 0.400089 4_4:-52818971 None:intergenic
AACCTCTCATCATTGCAATA+GGG 0.402275 4_4:-52812426 None:intergenic
TGATGAGCCAACAAGTGGTT+TGG 0.408781 4_4:+52816683 Msa0687830:CDS
AAGAAAAGGAGATTAGACTA+TGG 0.409404 4_4:+52815996 Msa0687830:CDS
GGGTAACGCCAGAAGAATTT+GGG 0.415275 4_4:-52819782 None:intergenic
AGTGTTGTAATTCCAAACTT+TGG 0.418834 4_4:+52812484 Msa0687830:CDS
AGATTGCTTAATGGTTTGAA+TGG 0.422251 4_4:+52812523 Msa0687830:CDS
AACAGAATCATGGCTATTAT+GGG 0.424886 4_4:+52812559 Msa0687830:CDS
GCTGGAAATGTTATCATGTC+TGG 0.433458 4_4:+52815954 Msa0687830:CDS
ACTCTTCTTGATGCTTTGGC+AGG 0.434230 4_4:+52812604 Msa0687830:CDS
GCTTTCAAGAATGATATGAT+TGG 0.435038 4_4:+52820195 Msa0687830:CDS
GTTGCTTCCACCATTTGGCT+TGG 0.446943 4_4:-52818742 None:intergenic
ATCATCCTCAAAACACTGCT+TGG 0.448762 4_4:+52820267 Msa0687830:CDS
AATGATGATTATAGCTGCAT+TGG 0.457169 4_4:+52819292 Msa0687830:CDS
GCAGTGATGTCATTTGCTAC+AGG 0.458834 4_4:+52819170 Msa0687830:CDS
ATGGCTATTATGGGTCCATC+TGG 0.460173 4_4:+52812568 Msa0687830:CDS
TTAAGAAACATTGCTCATGA+TGG 0.461579 4_4:+52816738 Msa0687830:CDS
CTTTCAAGAATGATATGATT+GGG 0.465357 4_4:+52820196 Msa0687830:CDS
TGGGAAGATCGCGGATCTGC+CGG 0.476853 4_4:-52819763 None:intergenic
TTTGGGCTGTATAGCTGTTG+TGG 0.479359 4_4:+52819262 Msa0687830:CDS
ACAACTACTATGATGACCTC+TGG 0.480463 4_4:+52817847 Msa0687830:CDS
TGCATTTCAGGTAGACTCGC+TGG 0.481105 4_4:+52815936 Msa0687830:intron
ATGTGGGGTACTATTGGATA+AGG 0.483315 4_4:+52818807 Msa0687830:CDS
TAGCACTTGAAATTCTTACT+AGG 0.486078 4_4:+52816643 Msa0687830:CDS
CATACATCAATTATGGAGCA+TGG 0.486868 4_4:+52819810 Msa0687830:CDS
AATGACATCACTGCTACAAA+AGG 0.489807 4_4:-52819161 None:intergenic
TGATCTCTTTCTACTTTCTG+GGG 0.489994 4_4:+52816818 Msa0687830:CDS
AATGTCAAAGACAATAATAA+AGG 0.491279 4_4:+52812394 Msa0687830:CDS
ATGCAATGGTTGGTGTCTCT+TGG 0.491423 4_4:-52820484 None:intergenic
TTCTACAAAGAAAGGCTGAA+TGG 0.492157 4_4:+52819089 Msa0687830:CDS
GCACTGTCCAAACCACTTGT+TGG 0.492437 4_4:-52816690 None:intergenic
ATTGTTGATGGTGCCAATGT+TGG 0.496841 4_4:-52818474 None:intergenic
AGAAAAGGAGATTAGACTAT+GGG 0.498475 4_4:+52815997 Msa0687830:CDS
ACACAAGAAGACATATTGTT+GGG 0.500880 4_4:+52816429 Msa0687830:CDS
TGCAGGTCTTCTACAAAGAA+AGG 0.506243 4_4:+52819081 Msa0687830:intron
TAAGAAACATTGCTCATGAT+GGG 0.509037 4_4:+52816739 Msa0687830:CDS
AGAGGGAACAATTATGGAGA+TGG 0.512569 4_4:+52816539 Msa0687830:CDS
GTAATTCCAAACTTTGGCAA+TGG 0.513085 4_4:+52812490 Msa0687830:CDS
GAATGATGGAAATCCTCCTA+TGG 0.513452 4_4:-52818957 None:intergenic
ATCATTCATAGAGGAAATGA+AGG 0.517994 4_4:+52818973 Msa0687830:CDS
ATACATCAATTATGGAGCAT+GGG 0.521899 4_4:+52819811 Msa0687830:CDS
ATGGGATTGATAATTGGAGC+AGG 0.524123 4_4:+52819329 Msa0687830:CDS
AAAGCAAGAGCCAAGCCAAA+TGG 0.525874 4_4:+52818732 Msa0687830:CDS
GACACAAGAAGACATATTGT+TGG 0.525876 4_4:+52816428 Msa0687830:CDS
GGTTTCTTCTACTTGGACAT+GGG 0.527136 4_4:-52817777 None:intergenic
GTCGCCTTATCTTTGTGTGT+CGG 0.532220 4_4:+52818842 Msa0687830:CDS
TGCTGAACCAAACAGAATCA+TGG 0.534128 4_4:+52812549 Msa0687830:CDS
CACTGCTACAAAAGGAAATG+AGG 0.534374 4_4:-52819153 None:intergenic
GGGTTTCTTCTACTTGGACA+TGG 0.542259 4_4:-52817778 None:intergenic
GCATCCATTGTCTTCTCAAG+AGG 0.542259 4_4:+52820503 Msa0687830:CDS
CAACTACTATGATGACCTCT+GGG 0.543585 4_4:+52817848 Msa0687830:CDS
GAGGGAACAATTATGGAGAT+GGG 0.544614 4_4:+52816540 Msa0687830:CDS
CAACGTAGGAAATGATCTGA+AGG 0.547630 4_4:-52817799 None:intergenic
CAAGAATGATATGATTGGGA+TGG 0.548066 4_4:+52820200 Msa0687830:CDS
ATGACATTCATGTCCATAGG+AGG 0.551015 4_4:+52818944 Msa0687830:CDS
GATCTCTTTCTACTTTCTGG+GGG 0.551751 4_4:+52816819 Msa0687830:CDS
TTCCTTGATGAGCCAACAAG+TGG 0.553210 4_4:+52816678 Msa0687830:CDS
AGTTGATTATTCAAAATGGT+GGG 0.557115 4_4:+52820296 Msa0687830:CDS
AGGATTTCCATCATTCATAG+AGG 0.557291 4_4:+52818964 Msa0687830:CDS
AAGTTGATTATTCAAAATGG+TGG 0.559482 4_4:+52820295 Msa0687830:CDS
AACCACTTGTTGGCTCATCA+AGG 0.560158 4_4:-52816680 None:intergenic
AGAGGTAAATGACATTGTAG+AGG 0.563748 4_4:+52816521 Msa0687830:CDS
TATGTCTTCTTGTGTCACAT+AGG 0.564420 4_4:-52816421 None:intergenic
TTGAATGCAGGAACCAACAT+TGG 0.565519 4_4:+52818461 Msa0687830:intron
CAGTGATGTCATTTGCTACA+GGG 0.570763 4_4:+52819171 Msa0687830:CDS
CACTTAAGGGGTATAAGTGG+TGG 0.573632 4_4:+52816600 Msa0687830:CDS
GTGAACATGTCTAGAGATGT+GGG 0.574659 4_4:+52818791 Msa0687830:CDS
TGGCACTTAAGGGGTATAAG+TGG 0.575434 4_4:+52816597 Msa0687830:CDS
CATCCATTGTCTTCTCAAGA+GGG 0.575790 4_4:+52820504 Msa0687830:CDS
TACATCAATTATGGAGCATG+GGG 0.575831 4_4:+52819812 Msa0687830:CDS
TGTGAACATGTCTAGAGATG+TGG 0.578089 4_4:+52818790 Msa0687830:CDS
AGCTACAATGACAAAAGAAG+AGG 0.578847 4_4:+52816503 Msa0687830:CDS
AAAGAGGGATGCATCTTGTG+TGG 0.580187 4_4:+52812452 Msa0687830:CDS
ATAGGAAATTGGCACTTAAG+GGG 0.587986 4_4:+52816588 Msa0687830:CDS
CACTGCAACGTATCAAGAAG+CGG 0.594446 4_4:+52820430 Msa0687830:CDS
GGTCTTATGATGATGACTGC+TGG 0.594603 4_4:+52819734 Msa0687830:CDS
GCAAGAGCCAAGCCAAATGG+TGG 0.598329 4_4:+52818735 Msa0687830:CDS
ACTGCAACGTATCAAGAAGC+GGG 0.598641 4_4:+52820431 Msa0687830:CDS
TGTTCCGACACACAAAGATA+AGG 0.599837 4_4:-52818846 None:intergenic
CCTGGTGACCCAAAACTGAA+AGG 0.601158 4_4:+52820240 Msa0687830:CDS
GTGTAGATACTGTGAAGGAA+AGG 0.601644 4_4:-52820399 None:intergenic
GAGTTTGATCCTAAAGAACC+TGG 0.605576 4_4:+52820222 Msa0687830:CDS
AGGGTCTATAACATATTACA+TGG 0.607459 4_4:+52819190 Msa0687830:CDS
GAGGTAAATGACATTGTAGA+GGG 0.607619 4_4:+52816522 Msa0687830:CDS
AATTCATCAACCAAGTAGTG+AGG 0.611540 4_4:+52816779 Msa0687830:CDS
AAGAGGGATGCATCTTGTGT+GGG 0.611942 4_4:+52812453 Msa0687830:CDS
GGATGAAGATGACCACAGCT+AGG 0.614478 4_4:-52820320 None:intergenic
AACCCTATTGCAATGATGAG+AGG 0.628062 4_4:+52812424 Msa0687830:CDS
TGAGAAGACAATGGATGCAA+TGG 0.631172 4_4:-52820498 None:intergenic
AAATAACTCTATGCAACATG+AGG 0.634933 4_4:-52820341 None:intergenic
TTCATGACATTCATGTCCAT+AGG 0.639062 4_4:+52818941 Msa0687830:CDS
AACGTAGGAAATGATCTGAA+GGG 0.648504 4_4:-52817798 None:intergenic
TACTCATAGAGAAATACCGT+TGG 0.650400 4_4:+52818526 Msa0687830:CDS
TGTCTCTTGGAAGCGAACGA+TGG 0.650991 4_4:-52820471 None:intergenic
ACCAGCTGAAAATGCAGTTG+AGG 0.652667 4_4:+52816860 Msa0687830:CDS
AAGACAATGGATGCAATGGT+TGG 0.655272 4_4:-52820494 None:intergenic
ACTACTATGATGACCTCTGG+GGG 0.658543 4_4:+52817850 Msa0687830:CDS
GAAAAGGAGATTAGACTATG+GGG 0.660221 4_4:+52815998 Msa0687830:CDS
AAAATGGTGGGACCTAGCTG+TGG 0.660866 4_4:+52820308 Msa0687830:CDS
AAGTTGCATATTCTGACCAA+CGG 0.663312 4_4:-52818542 None:intergenic
AGACCCTCTTGAGAAGACAA+TGG 0.665617 4_4:-52820507 None:intergenic
TCATCAAGGAACAAGAGACA+TGG 0.670614 4_4:-52816666 None:intergenic
TTGAGCAACAAAATATGCTG+AGG 0.670691 4_4:-52816712 None:intergenic
AGTCTGAATTAATACAACGT+AGG 0.671113 4_4:-52817813 None:intergenic
GCTTTGTGTAGATACTGTGA+AGG 0.674854 4_4:-52820404 None:intergenic
AGAAGAATTTGGGAAGATCG+CGG 0.693290 4_4:-52819772 None:intergenic
ACTTTGGCAATGGACATACA+AGG 0.701205 4_4:+52812500 Msa0687830:CDS
AACTACTATGATGACCTCTG+GGG 0.710293 4_4:+52817849 Msa0687830:CDS
TGAACATGTCTAGAGATGTG+GGG 0.783001 4_4:+52818792 Msa0687830:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGATTTTTATTTTCATTTTT+AGG + chr4_4:52812709-52812728 Msa0687830:intron 10.0%
!! AATACTATTAAAATTAAGTA+AGG - chr4_4:52814382-52814401 None:intergenic 10.0%
!!! TAAATTTTTGAACAATTTTT+TGG + chr4_4:52814481-52814500 Msa0687830:intron 10.0%
!! AAAGCTATTAAAATTAAATA+AGG + chr4_4:52814794-52814813 Msa0687830:intron 10.0%
!!! TTTCATTCTTTTTTTTTTTT+TGG + chr4_4:52814877-52814896 Msa0687830:intron 10.0%
!!! TTCATTCTTTTTTTTTTTTT+GGG + chr4_4:52814878-52814897 Msa0687830:intron 10.0%
!! TTTACTATATGAAAATATTA+AGG + chr4_4:52818661-52818680 Msa0687830:intron 10.0%
!!! TTTTTTTACTCAAAATATAA+AGG - chr4_4:52819378-52819397 None:intergenic 10.0%
!! AGATTATTCAAAAAAAATCT+TGG + chr4_4:52813335-52813354 Msa0687830:intron 15.0%
!! GATTATTCAAAAAAAATCTT+GGG + chr4_4:52813336-52813355 Msa0687830:intron 15.0%
!! ATTATTCAAAAAAAATCTTG+GGG + chr4_4:52813337-52813356 Msa0687830:intron 15.0%
!!! GGATCTATTTTTTTTTTTTT+TGG + chr4_4:52813706-52813725 Msa0687830:intron 15.0%
!! AAAAGTCATAATTACAAATT+GGG - chr4_4:52814209-52814228 None:intergenic 15.0%
!! TAAAAGTCATAATTACAAAT+TGG - chr4_4:52814210-52814229 None:intergenic 15.0%
!! TTCAAAAATTTAAGAATTCA+AGG - chr4_4:52814473-52814492 None:intergenic 15.0%
!! TAAGCATAATTAAACAAATT+TGG + chr4_4:52814722-52814741 Msa0687830:intron 15.0%
!! AAATAAGGACTAAATTTAAA+AGG + chr4_4:52814809-52814828 Msa0687830:intron 15.0%
!! TTAGAAAGATTAAAAAAATG+CGG - chr4_4:52814957-52814976 None:intergenic 15.0%
!!! AATAAAATGGAATTTGAAAT+TGG - chr4_4:52814983-52815002 None:intergenic 15.0%
!! ATATGTACTATAACAAAAAT+TGG + chr4_4:52815752-52815771 Msa0687830:intron 15.0%
!! TTACAAATTAGAATATTTAC+TGG - chr4_4:52817534-52817553 None:intergenic 15.0%
!!! TTTTTTTTTTTGAAGTAAGA+TGG - chr4_4:52817702-52817721 None:intergenic 15.0%
!!! TAATAGTTATCTTTAAAACA+TGG + chr4_4:52819456-52819475 Msa0687830:intron 15.0%
!!! TGTAAAACTTTTTACAATAA+CGG + chr4_4:52819656-52819675 Msa0687830:intron 15.0%
!! TCAAAAATACAAAGTTTATT+AGG - chr4_4:52820044-52820063 None:intergenic 15.0%
!! AATGTCAAAGACAATAATAA+AGG + chr4_4:52812394-52812413 Msa0687830:CDS 20.0%
!!! ATGTATTTTTTTTTTCTCCA+TGG + chr4_4:52813029-52813048 Msa0687830:intron 20.0%
!!! ATTTTGCCAAATCTATATTT+TGG - chr4_4:52813183-52813202 None:intergenic 20.0%
!!! TCAACATAACATTATTGTTT+TGG - chr4_4:52813479-52813498 None:intergenic 20.0%
!! TATGAAACTGAAAAGATATT+TGG + chr4_4:52814170-52814189 Msa0687830:intron 20.0%
!!! AAAAGGGTTAAATATGTTTT+TGG + chr4_4:52814324-52814343 Msa0687830:intron 20.0%
!!! CATGTAATTTTCTTTTTGTA+GGG - chr4_4:52814411-52814430 None:intergenic 20.0%
!!! ACATGTAATTTTCTTTTTGT+AGG - chr4_4:52814412-52814431 None:intergenic 20.0%
!! GCAAAATATTAACTCAAAAT+TGG - chr4_4:52814640-52814659 None:intergenic 20.0%
!! TAAACAAATTTGGATTAAGA+AGG + chr4_4:52814732-52814751 Msa0687830:intron 20.0%
!!! TAAATGCAGAATGTTTTTAT+AGG + chr4_4:52814764-52814783 Msa0687830:intron 20.0%
!!! AAATGCAGAATGTTTTTATA+GGG + chr4_4:52814765-52814784 Msa0687830:intron 20.0%
!! TTATTGATCCCTATAAAATT+GGG - chr4_4:52814836-52814855 None:intergenic 20.0%
!! ATTATTGATCCCTATAAAAT+TGG - chr4_4:52814837-52814856 None:intergenic 20.0%
!!! TTGAAGTTTGTTTATCTTTA+AGG - chr4_4:52815502-52815521 None:intergenic 20.0%
!! AATGCATTGGATATATAATT+GGG + chr4_4:52815907-52815926 Msa0687830:intron 20.0%
!!! TAATTTTTTCTTCATAGAAG+TGG - chr4_4:52816060-52816079 None:intergenic 20.0%
!!! AAACGACATTTATTTTGAAA+CGG - chr4_4:52816101-52816120 None:intergenic 20.0%
!! ACTCTTACAAAATTATTCTT+TGG - chr4_4:52816274-52816293 None:intergenic 20.0%
!! CTATGTGAAAAAATCTAAAA+CGG + chr4_4:52816334-52816353 Msa0687830:intron 20.0%
!! TTATGTATCAAACACTATAT+AGG + chr4_4:52816398-52816417 Msa0687830:intron 20.0%
!!! TGATATTTTGGTCTTTAAAA+CGG - chr4_4:52816923-52816942 None:intergenic 20.0%
!! TAACAAATAATATTAGACAG+TGG + chr4_4:52817079-52817098 Msa0687830:intron 20.0%
!! TCATTTATTTATTCATGTGT+TGG + chr4_4:52817148-52817167 Msa0687830:intron 20.0%
!! CATTTATTTATTCATGTGTT+GGG + chr4_4:52817149-52817168 Msa0687830:intron 20.0%
!! ATATGTAAGTATAGAATTTC+AGG - chr4_4:52817431-52817450 None:intergenic 20.0%
!! AAGTAAAGATAAAACAAAGA+AGG - chr4_4:52817969-52817988 None:intergenic 20.0%
!!! CGGTTTTTAAAAAATTAATC+TGG - chr4_4:52817998-52818017 None:intergenic 20.0%
!! ACAATATTCAAATTTCTCTT+TGG + chr4_4:52818113-52818132 Msa0687830:intron 20.0%
!! GTCACATTTAATATATTCTT+GGG - chr4_4:52818180-52818199 None:intergenic 20.0%
!! AGTCACATTTAATATATTCT+TGG - chr4_4:52818181-52818200 None:intergenic 20.0%
!! TGACTCAAATTTAATAAATG+CGG + chr4_4:52818196-52818215 Msa0687830:intron 20.0%
!! TTAAAACATGGTTACAAAAT+AGG + chr4_4:52819468-52819487 Msa0687830:intron 20.0%
!! ATAAAAATTAAACTCGACTA+TGG + chr4_4:52819682-52819701 Msa0687830:intron 20.0%
!! CATAATTGATGTATGAAATA+GGG - chr4_4:52819805-52819824 None:intergenic 20.0%
!! TTCTTCTATAAGCTATAATT+GGG + chr4_4:52820065-52820084 Msa0687830:intron 20.0%
!!! TGAAAGTTGATTATTCAAAA+TGG + chr4_4:52820292-52820311 Msa0687830:CDS 20.0%
! ATATTCTCTGATCAATTTCT+TGG - chr4_4:52813011-52813030 None:intergenic 25.0%
! AACAAATGAAAGCAATTAAC+AGG + chr4_4:52813055-52813074 Msa0687830:intron 25.0%
! GAAATCCATACTCTATAAAT+TGG + chr4_4:52813279-52813298 Msa0687830:intron 25.0%
!! GCTTTTACATAGAAATATCT+TGG + chr4_4:52813310-52813329 Msa0687830:intron 25.0%
!! AACAATCTCCTTAGATTTTA+TGG - chr4_4:52813447-52813466 None:intergenic 25.0%
! AATCTAAGGAGATTGTTATA+TGG + chr4_4:52813450-52813469 Msa0687830:intron 25.0%
!! AAAGTATTAACGTGTGTTAT+TGG + chr4_4:52813947-52813966 Msa0687830:intron 25.0%
!! AAGTATTAACGTGTGTTATT+GGG + chr4_4:52813948-52813967 Msa0687830:intron 25.0%
! TTTCTTTGACCATTTGTTTA+AGG + chr4_4:52814009-52814028 Msa0687830:intron 25.0%
! CACTAAAAATAATCCATTGT+CGG + chr4_4:52814047-52814066 Msa0687830:intron 25.0%
! TTGATTGACATTCTATTCTT+TGG + chr4_4:52814073-52814092 Msa0687830:intron 25.0%
!! TAACCCTTTTCAAAATGAAT+GGG - chr4_4:52814314-52814333 None:intergenic 25.0%
!! TTAACCCTTTTCAAAATGAA+TGG - chr4_4:52814315-52814334 None:intergenic 25.0%
!!! TTTTTGGTCCCTATAAAATT+GGG + chr4_4:52814340-52814359 Msa0687830:intron 25.0%
!! TAGAAGTTCCCAATTTTATA+GGG - chr4_4:52814351-52814370 None:intergenic 25.0%
!! TTAGAAGTTCCCAATTTTAT+AGG - chr4_4:52814352-52814371 None:intergenic 25.0%
!! AAACAAATTGAGTTTTTACG+AGG - chr4_4:52814444-52814463 None:intergenic 25.0%
! AGCAAAGAGTAACAAAAATA+TGG + chr4_4:52814604-52814623 Msa0687830:intron 25.0%
!!! TTTGAGTTAATATTTTGCAG+AGG + chr4_4:52814642-52814661 Msa0687830:intron 25.0%
!! TTGAGTTAATATTTTGCAGA+GGG + chr4_4:52814643-52814662 Msa0687830:intron 25.0%
!! CTTTTAGTAATGTTCTTAAC+AGG + chr4_4:52814667-52814686 Msa0687830:intron 25.0%
!! TTAAAAGGTCCCAATTTTAT+AGG + chr4_4:52814824-52814843 Msa0687830:intron 25.0%
!! TAAAAGGTCCCAATTTTATA+GGG + chr4_4:52814825-52814844 Msa0687830:intron 25.0%
! ATGTGATGAACGAAATAAAA+TGG - chr4_4:52814996-52815015 None:intergenic 25.0%
! GCTAAATATAGTCATAGAAT+GGG - chr4_4:52815051-52815070 None:intergenic 25.0%
! AGCTAAATATAGTCATAGAA+TGG - chr4_4:52815052-52815071 None:intergenic 25.0%
! TGTAGCTAGGTATAATTTAA+TGG - chr4_4:52815240-52815259 None:intergenic 25.0%
! AATTGAAGAATAATGTAGCT+AGG - chr4_4:52815253-52815272 None:intergenic 25.0%
! ATTTATTTCAAGACGTGAAT+TGG + chr4_4:52815379-52815398 Msa0687830:intron 25.0%
! TTTATTTCAAGACGTGAATT+GGG + chr4_4:52815380-52815399 Msa0687830:intron 25.0%
! AAGGATAAATAAAGTAGCAT+GGG - chr4_4:52815483-52815502 None:intergenic 25.0%
! TAAGGATAAATAAAGTAGCA+TGG - chr4_4:52815484-52815503 None:intergenic 25.0%
! AACAAACTTCAATTATTCAG+CGG + chr4_4:52815510-52815529 Msa0687830:intron 25.0%
!! AATATTTGACTTCTTTGTCA+TGG + chr4_4:52815583-52815602 Msa0687830:intron 25.0%
! TGTACTATAACAAAAATTGG+TGG + chr4_4:52815755-52815774 Msa0687830:intron 25.0%
! GTACTATAACAAAAATTGGT+GGG + chr4_4:52815756-52815775 Msa0687830:intron 25.0%
! CAATTATATATCCAATGCAT+TGG - chr4_4:52815908-52815927 None:intergenic 25.0%
! CAATGCATTGGATATATAAT+TGG + chr4_4:52815906-52815925 Msa0687830:intron 25.0%
!! TGCTTTTAAATGGAAAGAAA+AGG + chr4_4:52815982-52816001 Msa0687830:CDS 25.0%
! ATAATGACTTGAAAATGATC+CGG - chr4_4:52816214-52816233 None:intergenic 25.0%
! TATCTTACTCAGCAAATTTA+AGG + chr4_4:52816475-52816494 Msa0687830:CDS 25.0%
! TTAAAACGGTAAATATGAGA+GGG - chr4_4:52816909-52816928 None:intergenic 25.0%
!! TTTAAAACGGTAAATATGAG+AGG - chr4_4:52816910-52816929 None:intergenic 25.0%
! AATATATGGTGACTTGATAA+CGG - chr4_4:52816958-52816977 None:intergenic 25.0%
! TCAAAGTAGTTGCAAATATA+TGG - chr4_4:52816972-52816991 None:intergenic 25.0%
! TATGATTAGTGCTTCATTTA+AGG + chr4_4:52817242-52817261 Msa0687830:intron 25.0%
! ATGATTAGTGCTTCATTTAA+GGG + chr4_4:52817243-52817262 Msa0687830:intron 25.0%
!! GGCATACATAAGAATTTTAA+TGG - chr4_4:52817342-52817361 None:intergenic 25.0%
! AAAAACTGCATGTAAATAGA+TGG - chr4_4:52817742-52817761 None:intergenic 25.0%
!!! TCTATTTACATGCAGTTTTT+TGG + chr4_4:52817742-52817761 Msa0687830:intron 25.0%
!!! TTTTTAAAAACCGAACTTGA+TGG + chr4_4:52818005-52818024 Msa0687830:intron 25.0%
!!! TTAAGGGACAAAAGTATTAT+AGG - chr4_4:52818416-52818435 None:intergenic 25.0%
! TAATTAATAACACGATTCGT+TGG - chr4_4:52818687-52818706 None:intergenic 25.0%
!! ACATCTTTTGTATATCTGTT+TGG + chr4_4:52819235-52819254 Msa0687830:CDS 25.0%
!! TATATCTGTTTGGATCTTTT+GGG + chr4_4:52819245-52819264 Msa0687830:CDS 25.0%
! ATCAATCCCATAAGAAAATT+GGG - chr4_4:52819320-52819339 None:intergenic 25.0%
! TATCAATCCCATAAGAAAAT+TGG - chr4_4:52819321-52819340 None:intergenic 25.0%
!! TTTCTTATGGGATTGATAAT+TGG + chr4_4:52819323-52819342 Msa0687830:CDS 25.0%
! CCATAATTGATGTATGAAAT+AGG - chr4_4:52819806-52819825 None:intergenic 25.0%
! CCTATTTCATACATCAATTA+TGG + chr4_4:52819803-52819822 Msa0687830:CDS 25.0%
! TAACGAGTACTTATCATATA+TGG + chr4_4:52819969-52819988 Msa0687830:intron 25.0%
! AACGAGTACTTATCATATAT+GGG + chr4_4:52819970-52819989 Msa0687830:intron 25.0%
! TACTATCAAAGAGAAAATGA+GGG + chr4_4:52820012-52820031 Msa0687830:intron 25.0%
! CTTCTTCTATAAGCTATAAT+TGG + chr4_4:52820064-52820083 Msa0687830:intron 25.0%
! CTTTCAAGAATGATATGATT+GGG + chr4_4:52820196-52820215 Msa0687830:CDS 25.0%
!! AAGTTGATTATTCAAAATGG+TGG + chr4_4:52820295-52820314 Msa0687830:CDS 25.0%
! AGTTGATTATTCAAAATGGT+GGG + chr4_4:52820296-52820315 Msa0687830:CDS 25.0%
! CTTCTTCATTCTCAAAATTA+AGG + chr4_4:52820365-52820384 Msa0687830:CDS 25.0%
AGTGTTGTAATTCCAAACTT+TGG + chr4_4:52812484-52812503 Msa0687830:CDS 30.0%
AGATTGCTTAATGGTTTGAA+TGG + chr4_4:52812523-52812542 Msa0687830:CDS 30.0%
ATAATAGCCATGATTCTGTT+TGG - chr4_4:52812559-52812578 None:intergenic 30.0%
AAACAGAATCATGGCTATTA+TGG + chr4_4:52812558-52812577 Msa0687830:CDS 30.0%
AACAGAATCATGGCTATTAT+GGG + chr4_4:52812559-52812578 Msa0687830:CDS 30.0%
!! TCATGACTTGTGATTTTCAT+GGG - chr4_4:52812647-52812666 None:intergenic 30.0%
!! TTCATGACTTGTGATTTTCA+TGG - chr4_4:52812648-52812667 None:intergenic 30.0%
!!! CATTTTTAGGTCATTCATGT+TGG + chr4_4:52812722-52812741 Msa0687830:intron 30.0%
GAACCTCCAAAATATAGATT+TGG + chr4_4:52813174-52813193 Msa0687830:intron 30.0%
!! TTGCCAAATCTATATTTTGG+AGG - chr4_4:52813180-52813199 None:intergenic 30.0%
AAGCTCCAATTTATAGAGTA+TGG - chr4_4:52813287-52813306 None:intergenic 30.0%
ACTAAAATGTCCTTTCACAT+GGG - chr4_4:52813531-52813550 None:intergenic 30.0%
TACTAAAATGTCCTTTCACA+TGG - chr4_4:52813532-52813551 None:intergenic 30.0%
GAAATTGCGCTAATACAAAA+CGG + chr4_4:52813685-52813704 Msa0687830:intron 30.0%
!!! GGACTTAAGTCTATTTTTTC+TGG - chr4_4:52813854-52813873 None:intergenic 30.0%
! AGTATTAACGTGTGTTATTG+GGG + chr4_4:52813949-52813968 Msa0687830:intron 30.0%
TTGACCATTTGTTTAAGGAT+TGG + chr4_4:52814014-52814033 Msa0687830:intron 30.0%
TAAAAATAATCCATTGTCGG+TGG + chr4_4:52814050-52814069 Msa0687830:intron 30.0%
! CATATCTAACTATGAGTTGA+TGG - chr4_4:52814134-52814153 None:intergenic 30.0%
AGTCATAATTACAAATTGGG+AGG - chr4_4:52814206-52814225 None:intergenic 30.0%
!! TCATCCCATTCATTTTGAAA+AGG + chr4_4:52814307-52814326 Msa0687830:intron 30.0%
!! CATCCCATTCATTTTGAAAA+GGG + chr4_4:52814308-52814327 Msa0687830:intron 30.0%
!!! GTTTTTGGTCCCTATAAAAT+TGG + chr4_4:52814339-52814358 Msa0687830:intron 30.0%
ACATAAATCTAGTCTACTGT+GGG - chr4_4:52815132-52815151 None:intergenic 30.0%
TACATAAATCTAGTCTACTG+TGG - chr4_4:52815133-52815152 None:intergenic 30.0%
! ATTTGATTTCAACCTTGTAC+CGG - chr4_4:52815174-52815193 None:intergenic 30.0%
!! TACATGCTTTTTGCTTTGTT+TGG - chr4_4:52815706-52815725 None:intergenic 30.0%
TGAACAAATTACCAATGCAT+TGG + chr4_4:52815894-52815913 Msa0687830:intron 30.0%
!! TCTGGTAATGTGCTTTTAAA+TGG + chr4_4:52815972-52815991 Msa0687830:CDS 30.0%
AAGAAAAGGAGATTAGACTA+TGG + chr4_4:52815996-52816015 Msa0687830:CDS 30.0%
AGAAAAGGAGATTAGACTAT+GGG + chr4_4:52815997-52816016 Msa0687830:CDS 30.0%
AACCCTAAATTAATCTTGAC+CGG + chr4_4:52816192-52816211 Msa0687830:intron 30.0%
ATCCGGTCAAGATTAATTTA+GGG - chr4_4:52816197-52816216 None:intergenic 30.0%
ACACAAGAAGACATATTGTT+GGG + chr4_4:52816429-52816448 Msa0687830:CDS 30.0%
CTGATAGACTTATAGGAAAT+TGG + chr4_4:52816577-52816596 Msa0687830:CDS 30.0%
TTATAGGAAATTGGCACTTA+AGG + chr4_4:52816586-52816605 Msa0687830:CDS 30.0%
TATAGGAAATTGGCACTTAA+GGG + chr4_4:52816587-52816606 Msa0687830:CDS 30.0%
TAGCACTTGAAATTCTTACT+AGG + chr4_4:52816643-52816662 Msa0687830:CDS 30.0%
TTAAGAAACATTGCTCATGA+TGG + chr4_4:52816738-52816757 Msa0687830:CDS 30.0%
TAAGAAACATTGCTCATGAT+GGG + chr4_4:52816739-52816758 Msa0687830:CDS 30.0%
ATGATCTCTTTCTACTTTCT+GGG + chr4_4:52816817-52816836 Msa0687830:CDS 30.0%
!!! TTTTTTTGAAGGGAACAAGA+GGG - chr4_4:52817184-52817203 None:intergenic 30.0%
!!! TTTTTTTTGAAGGGAACAAG+AGG - chr4_4:52817185-52817204 None:intergenic 30.0%
AATCATAGAAGCTAACAAGA+GGG - chr4_4:52817229-52817248 None:intergenic 30.0%
TAATCATAGAAGCTAACAAG+AGG - chr4_4:52817230-52817249 None:intergenic 30.0%
! CATTCCAAACTCAAAGTTTT+GGG + chr4_4:52817272-52817291 Msa0687830:intron 30.0%
! AAATCCCAAAACTTTGAGTT+TGG - chr4_4:52817279-52817298 None:intergenic 30.0%
!!! AAACTCAAAGTTTTGGGATT+TGG + chr4_4:52817278-52817297 Msa0687830:intron 30.0%
AGTCTGAATTAATACAACGT+AGG - chr4_4:52817816-52817835 None:intergenic 30.0%
! TTTGTTCCTTCAATTGATTC+AGG + chr4_4:52817934-52817953 Msa0687830:intron 30.0%
ATTTGTTTCACTCAAGAATG+TGG + chr4_4:52818142-52818161 Msa0687830:intron 30.0%
TGAAATTCAAACATCGCTAT+CGG - chr4_4:52818349-52818368 None:intergenic 30.0%
! GAAGGAAGTGATAATGTTAA+GGG - chr4_4:52818432-52818451 None:intergenic 30.0%
! TGAAGGAAGTGATAATGTTA+AGG - chr4_4:52818433-52818452 None:intergenic 30.0%
! TGCATTCAAACAGATTTTGA+AGG - chr4_4:52818450-52818469 None:intergenic 30.0%
TTCAAAATCTGTTTGAATGC+AGG + chr4_4:52818449-52818468 Msa0687830:intron 30.0%
! GTTGATAAGTTCATTGTTGA+TGG - chr4_4:52818489-52818508 None:intergenic 30.0%
GTAAGTATCCCTTTATTCAT+CGG + chr4_4:52818600-52818619 Msa0687830:intron 30.0%
TACAACATCCGATGAATAAA+GGG - chr4_4:52818611-52818630 None:intergenic 30.0%
TTACAACATCCGATGAATAA+AGG - chr4_4:52818612-52818631 None:intergenic 30.0%
! CATGTTATTTGAGAAGACTT+AGG - chr4_4:52818635-52818654 None:intergenic 30.0%
! CGAATCGTGTTATTAATTAC+AGG + chr4_4:52818688-52818707 Msa0687830:intron 30.0%
! TCGTGTTATTAATTACAGGA+AGG + chr4_4:52818692-52818711 Msa0687830:intron 30.0%
!!! TATACAGCTATTTTTGCAAG+AGG + chr4_4:52818893-52818912 Msa0687830:CDS 30.0%
TTCATTTCCTCTATGAATGA+TGG - chr4_4:52818974-52818993 None:intergenic 30.0%
ATCATTCATAGAGGAAATGA+AGG + chr4_4:52818973-52818992 Msa0687830:CDS 30.0%
AGGGTCTATAACATATTACA+TGG + chr4_4:52819190-52819209 Msa0687830:CDS 30.0%
! GTATATCTGTTTGGATCTTT+TGG + chr4_4:52819244-52819263 Msa0687830:CDS 30.0%
AATGATGATTATAGCTGCAT+TGG + chr4_4:52819292-52819311 Msa0687830:CDS 30.0%
!! ATTGGTTCCCAATTTTCTTA+TGG + chr4_4:52819310-52819329 Msa0687830:CDS 30.0%
! TTGGTTCCCAATTTTCTTAT+GGG + chr4_4:52819311-52819330 Msa0687830:CDS 30.0%
!! ACTCTATTTCTATTAGACGT+CGG - chr4_4:52819433-52819452 None:intergenic 30.0%
AACCACTAAACTCAAATCAT+CGG + chr4_4:52819558-52819577 Msa0687830:intron 30.0%
TGTAAAACATACATGTGTAC+AGG + chr4_4:52819712-52819731 Msa0687830:intron 30.0%
GTAAAACATACATGTGTACA+GGG + chr4_4:52819713-52819732 Msa0687830:intron 30.0%
ATACATCAATTATGGAGCAT+GGG + chr4_4:52819811-52819830 Msa0687830:CDS 30.0%
CTACTATCAAAGAGAAAATG+AGG + chr4_4:52820011-52820030 Msa0687830:intron 30.0%
TGACATAACCTTAGTGATTA+TGG + chr4_4:52820160-52820179 Msa0687830:intron 30.0%
GACATAACCTTAGTGATTAT+GGG + chr4_4:52820161-52820180 Msa0687830:intron 30.0%
ACATAACCTTAGTGATTATG+GGG + chr4_4:52820162-52820181 Msa0687830:intron 30.0%
GCTTTCAAGAATGATATGAT+TGG + chr4_4:52820195-52820214 Msa0687830:CDS 30.0%
AAATAACTCTATGCAACATG+AGG - chr4_4:52820344-52820363 None:intergenic 30.0%
AACCTCTCATCATTGCAATA+GGG - chr4_4:52812429-52812448 None:intergenic 35.0%
ATGATGAGAGGTTCAAAAAG+AGG + chr4_4:52812436-52812455 Msa0687830:CDS 35.0%
TGATGAGAGGTTCAAAAAGA+GGG + chr4_4:52812437-52812456 Msa0687830:CDS 35.0%
GTAATTCCAAACTTTGGCAA+TGG + chr4_4:52812490-52812509 Msa0687830:CDS 35.0%
CATACAAGGAGATTGCTTAA+TGG + chr4_4:52812514-52812533 Msa0687830:CDS 35.0%
ATCTACTCTTCTTGATGCTT+TGG + chr4_4:52812600-52812619 Msa0687830:CDS 35.0%
!! CATGACTTGTGATTTTCATG+GGG - chr4_4:52812646-52812665 None:intergenic 35.0%
CCACTTGGCAATATACAAAA+GGG - chr4_4:52812874-52812893 None:intergenic 35.0%
! CCTTTTGTATATTGCCAAGT+GGG + chr4_4:52812872-52812891 Msa0687830:intron 35.0%
! CTTTTGTATATTGCCAAGTG+GGG + chr4_4:52812873-52812892 Msa0687830:intron 35.0%
TAACCTCTCATATTGCAACA+AGG - chr4_4:52812914-52812933 None:intergenic 35.0%
ATCACCCTATAACTGAAGTA+AGG + chr4_4:52812944-52812963 Msa0687830:intron 35.0%
TCCAGTAATCATGTTTACTC+AGG - chr4_4:52812970-52812989 None:intergenic 35.0%
TGCTTTCATTTGTTCATCCA+TGG - chr4_4:52813049-52813068 None:intergenic 35.0%
GACCTGCATGTTTGATATTA+CGG + chr4_4:52813086-52813105 Msa0687830:intron 35.0%
CGGTGAATGTCTCTAAATTA+AGG + chr4_4:52813106-52813125 Msa0687830:intron 35.0%
! TTCGCATGTTTGAGATAGTT+TGG - chr4_4:52813262-52813281 None:intergenic 35.0%
ACTCTATAAATTGGAGCTTG+TGG + chr4_4:52813288-52813307 Msa0687830:intron 35.0%
GCAATTGCTTATTATGCGTT+TGG - chr4_4:52813402-52813421 None:intergenic 35.0%
TCTCACGACCATAAAATCTA+AGG + chr4_4:52813436-52813455 Msa0687830:intron 35.0%
! CCTTACACTCTCTTTTACAT+GGG - chr4_4:52813561-52813580 None:intergenic 35.0%
! ACCTTACACTCTCTTTTACA+TGG - chr4_4:52813562-52813581 None:intergenic 35.0%
! ATGTAAAAGAGAGTGTAAGG+TGG + chr4_4:52813561-52813580 Msa0687830:intron 35.0%
! TGTAAAAGAGAGTGTAAGGT+GGG + chr4_4:52813562-52813581 Msa0687830:intron 35.0%
ATTTCGTACCAAGATGCTTT+CGG - chr4_4:52813670-52813689 None:intergenic 35.0%
TGCTCCAATCCTTAAACAAA+TGG - chr4_4:52814021-52814040 None:intergenic 35.0%
!! AACTATGAGTTGATGGTAGA+TGG - chr4_4:52814127-52814146 None:intergenic 35.0%
TACTGTGGGTAAAATGCTAA+GGG - chr4_4:52815118-52815137 None:intergenic 35.0%
AAAGTCCATGCTAAATTTGC+CGG + chr4_4:52815152-52815171 Msa0687830:intron 35.0%
CAAAGAATGAAGCAAAAGCT+TGG + chr4_4:52815285-52815304 Msa0687830:intron 35.0%
AATAAAGTAGCATGGGTCAT+AGG - chr4_4:52815476-52815495 None:intergenic 35.0%
TACTAACATCTACTCTTGAC+AGG + chr4_4:52815552-52815571 Msa0687830:intron 35.0%
ACTAACATCTACTCTTGACA+GGG + chr4_4:52815553-52815572 Msa0687830:intron 35.0%
!!! GCTTTTTGCTTTGTTTGGAT+TGG - chr4_4:52815701-52815720 None:intergenic 35.0%
AAAATAAGGGCTTAGGTTCT+AGG - chr4_4:52815807-52815826 None:intergenic 35.0%
!! TAGAACCTAAGCCCTTATTT+TGG + chr4_4:52815806-52815825 Msa0687830:intron 35.0%
AATGTCCAAAATAAGGGCTT+AGG - chr4_4:52815814-52815833 None:intergenic 35.0%
!!! TAAGCCCTTATTTTGGACAT+TGG + chr4_4:52815813-52815832 Msa0687830:intron 35.0%
!!! AAGCCCTTATTTTGGACATT+GGG + chr4_4:52815814-52815833 Msa0687830:intron 35.0%
CTACCCAATGTCCAAAATAA+GGG - chr4_4:52815820-52815839 None:intergenic 35.0%
ACTACCCAATGTCCAAAATA+AGG - chr4_4:52815821-52815840 None:intergenic 35.0%
!! ATTGGGATTTGTTGCATTTC+AGG + chr4_4:52815924-52815943 Msa0687830:intron 35.0%
GAAAAGGAGATTAGACTATG+GGG + chr4_4:52815998-52816017 Msa0687830:CDS 35.0%
GATCCGGTCAAGATTAATTT+AGG - chr4_4:52816198-52816217 None:intergenic 35.0%
TATGTCTTCTTGTGTCACAT+AGG - chr4_4:52816424-52816443 None:intergenic 35.0%
GACACAAGAAGACATATTGT+TGG + chr4_4:52816428-52816447 Msa0687830:CDS 35.0%
! TCTTCTTTTGTCATTGTAGC+TGG - chr4_4:52816504-52816523 None:intergenic 35.0%
AGCTACAATGACAAAAGAAG+AGG + chr4_4:52816503-52816522 Msa0687830:CDS 35.0%
AGAGGTAAATGACATTGTAG+AGG + chr4_4:52816521-52816540 Msa0687830:CDS 35.0%
GAGGTAAATGACATTGTAGA+GGG + chr4_4:52816522-52816541 Msa0687830:CDS 35.0%
CATTGTAGAGGGAACAATTA+TGG + chr4_4:52816533-52816552 Msa0687830:CDS 35.0%
! GATTGTGCTGATAGACTTAT+AGG + chr4_4:52816570-52816589 Msa0687830:CDS 35.0%
ATAGGAAATTGGCACTTAAG+GGG + chr4_4:52816588-52816607 Msa0687830:CDS 35.0%
TTGAGCAACAAAATATGCTG+AGG - chr4_4:52816715-52816734 None:intergenic 35.0%
AATTCATCAACCAAGTAGTG+AGG + chr4_4:52816779-52816798 Msa0687830:CDS 35.0%
AATGCAAAAACCTCACTACT+TGG - chr4_4:52816792-52816811 None:intergenic 35.0%
GATGATCTCTTTCTACTTTC+TGG + chr4_4:52816816-52816835 Msa0687830:CDS 35.0%
TGATCTCTTTCTACTTTCTG+GGG + chr4_4:52816818-52816837 Msa0687830:CDS 35.0%
TAAATATGAGAGGGAGAGAT+TGG - chr4_4:52816900-52816919 None:intergenic 35.0%
ACCAAAATATCATTGTACCC+TGG + chr4_4:52816931-52816950 Msa0687830:intron 35.0%
! TCCAGGGTACAATGATATTT+TGG - chr4_4:52816935-52816954 None:intergenic 35.0%
TATTCATGTGTTGGGAACTA+TGG + chr4_4:52817157-52817176 Msa0687830:intron 35.0%
ATTAGTGCTTCATTTAAGGG+AGG + chr4_4:52817246-52817265 Msa0687830:intron 35.0%
! GCATTCCAAACTCAAAGTTT+TGG + chr4_4:52817271-52817290 Msa0687830:intron 35.0%
AACGTAGGAAATGATCTGAA+GGG - chr4_4:52817801-52817820 None:intergenic 35.0%
GAAGAACCTGAATCAATTGA+AGG - chr4_4:52817943-52817962 None:intergenic 35.0%
! ACCGAACTTGATGGTTTAAT+CGG + chr4_4:52818014-52818033 Msa0687830:intron 35.0%
ACCGATTAAACCATCAAGTT+CGG - chr4_4:52818018-52818037 None:intergenic 35.0%
TGAAACTATGTCCGAATTGT+AGG - chr4_4:52818063-52818082 None:intergenic 35.0%
!! TAGTTTCATTCTAGTTCGAG+CGG + chr4_4:52818075-52818094 Msa0687830:intron 35.0%
GAATGAACTTGACACTTGTT+TGG + chr4_4:52818223-52818242 Msa0687830:intron 35.0%
GAAGCTTCAAAGTGTAACTT+TGG + chr4_4:52818266-52818285 Msa0687830:intron 35.0%
GATAGCGATGTTTGAATTTC+AGG + chr4_4:52818348-52818367 Msa0687830:intron 35.0%
TACTCATAGAGAAATACCGT+TGG + chr4_4:52818526-52818545 Msa0687830:CDS 35.0%
AAGTTGCATATTCTGACCAA+CGG - chr4_4:52818545-52818564 None:intergenic 35.0%
! GGAACAATCTTTTATGACGT+TGG + chr4_4:52818863-52818882 Msa0687830:CDS 35.0%
TTCATGACATTCATGTCCAT+AGG + chr4_4:52818941-52818960 Msa0687830:CDS 35.0%
AGGATTTCCATCATTCATAG+AGG + chr4_4:52818964-52818983 Msa0687830:CDS 35.0%
TCGTCTCTAACATTTAGTGA+CGG + chr4_4:52819030-52819049 Msa0687830:intron 35.0%
!! TGTTTTATTCTGTCTTGTGC+AGG + chr4_4:52819064-52819083 Msa0687830:intron 35.0%
TTCTACAAAGAAAGGCTGAA+TGG + chr4_4:52819089-52819108 Msa0687830:CDS 35.0%
GAAAGGCTGAATGGATATTA+TGG + chr4_4:52819098-52819117 Msa0687830:CDS 35.0%
AATGACATCACTGCTACAAA+AGG - chr4_4:52819164-52819183 None:intergenic 35.0%
! CTTTTACACCGTCATCTAAT+AGG - chr4_4:52819517-52819536 None:intergenic 35.0%
! ATCCGATGATTTGAGTTTAG+TGG - chr4_4:52819563-52819582 None:intergenic 35.0%
CATACATCAATTATGGAGCA+TGG + chr4_4:52819810-52819829 Msa0687830:CDS 35.0%
TACATCAATTATGGAGCATG+GGG + chr4_4:52819812-52819831 Msa0687830:CDS 35.0%
GCAAACACATCAATTGTTAG+TGG - chr4_4:52820137-52820156 None:intergenic 35.0%
CAAGAATGATATGATTGGGA+TGG + chr4_4:52820200-52820219 Msa0687830:CDS 35.0%
! TGATCTCTCCTTTCAGTTTT+GGG - chr4_4:52820251-52820270 None:intergenic 35.0%
! ATGATCTCTCCTTTCAGTTT+TGG - chr4_4:52820252-52820271 None:intergenic 35.0%
AACCCTATTGCAATGATGAG+AGG + chr4_4:52812424-52812443 Msa0687830:CDS 40.0%
GAACCTCTCATCATTGCAAT+AGG - chr4_4:52812430-52812449 None:intergenic 40.0%
GTATGTCCATTGCCAAAGTT+TGG - chr4_4:52812499-52812518 None:intergenic 40.0%
ACTTTGGCAATGGACATACA+AGG + chr4_4:52812500-52812519 Msa0687830:CDS 40.0%
TGCTGAACCAAACAGAATCA+TGG + chr4_4:52812549-52812568 Msa0687830:CDS 40.0%
! GTAGATTTTCCAGAACCAGA+TGG - chr4_4:52812586-52812605 None:intergenic 40.0%
! ACTTGTGATTTTCATGGGGT+AGG - chr4_4:52812642-52812661 None:intergenic 40.0%
! CCCTTTTGTATATTGCCAAG+TGG + chr4_4:52812871-52812890 Msa0687830:intron 40.0%
CCCACTTGGCAATATACAAA+AGG - chr4_4:52812875-52812894 None:intergenic 40.0%
GTTATATAACTCACCCCACT+TGG - chr4_4:52812889-52812908 None:intergenic 40.0%
CATCCTTGTTGCAATATGAG+AGG + chr4_4:52812908-52812927 Msa0687830:intron 40.0%
CAGGCCTTACTTCAGTTATA+GGG - chr4_4:52812951-52812970 None:intergenic 40.0%
TCAGGCCTTACTTCAGTTAT+AGG - chr4_4:52812952-52812971 None:intergenic 40.0%
GCCTGAGTAAACATGATTAC+TGG + chr4_4:52812966-52812985 Msa0687830:intron 40.0%
CACCGTAATATCAAACATGC+AGG - chr4_4:52813091-52813110 None:intergenic 40.0%
AAATTCACTACGTGCTCGTT+CGG + chr4_4:52813228-52813247 Msa0687830:intron 40.0%
ATGGGATGTATAACGAAGGT+AGG - chr4_4:52813513-52813532 None:intergenic 40.0%
TCACATGGGATGTATAACGA+AGG - chr4_4:52813517-52813536 None:intergenic 40.0%
CGTTATACATCCCATGTGAA+AGG + chr4_4:52813518-52813537 Msa0687830:intron 40.0%
! CCCATGTAAAAGAGAGTGTA+AGG + chr4_4:52813558-52813577 Msa0687830:intron 40.0%
! GTAAAAGAGAGTGTAAGGTG+GGG + chr4_4:52813563-52813582 Msa0687830:intron 40.0%
AGTGATACGTTGACAACCAT+AGG - chr4_4:52813640-52813659 None:intergenic 40.0%
!! TACTCTATCCGAAAGCATCT+TGG + chr4_4:52813659-52813678 Msa0687830:intron 40.0%
AGATTACTTACCCAACTCTC+CGG + chr4_4:52813774-52813793 Msa0687830:intron 40.0%
!! AGTTGATGGTAGATGGATGT+TGG - chr4_4:52814120-52814139 None:intergenic 40.0%
CTACTGTGGGTAAAATGCTA+AGG - chr4_4:52815119-52815138 None:intergenic 40.0%
! TTGTACCGGCAAATTTAGCA+TGG - chr4_4:52815160-52815179 None:intergenic 40.0%
ATGCTAAATTTGCCGGTACA+AGG + chr4_4:52815159-52815178 Msa0687830:intron 40.0%
!! GTGAGTAGGTCTTGTTTGTT+GGG - chr4_4:52815450-52815469 None:intergenic 40.0%
!! TGTGAGTAGGTCTTGTTTGT+TGG - chr4_4:52815451-52815470 None:intergenic 40.0%
TGGACGTTAGTTGATTGTCA+TGG + chr4_4:52815603-52815622 Msa0687830:intron 40.0%
GCTGGAAATGTTATCATGTC+TGG + chr4_4:52815954-52815973 Msa0687830:CDS 40.0%
AGAGGGAACAATTATGGAGA+TGG + chr4_4:52816539-52816558 Msa0687830:CDS 40.0%
GAGGGAACAATTATGGAGAT+GGG + chr4_4:52816540-52816559 Msa0687830:CDS 40.0%
TCATCAAGGAACAAGAGACA+TGG - chr4_4:52816669-52816688 None:intergenic 40.0%
GATCTCTTTCTACTTTCTGG+GGG + chr4_4:52816819-52816838 Msa0687830:CDS 40.0%
GGGGGTCAAACAATTTACTT+TGG + chr4_4:52816837-52816856 Msa0687830:CDS 40.0%
!!! ATGCAGTTTTTTGGCAAAGC+AGG + chr4_4:52817751-52817770 Msa0687830:intron 40.0%
GGTTTCTTCTACTTGGACAT+GGG - chr4_4:52817780-52817799 None:intergenic 40.0%
TCTGAAGGGTTTCTTCTACT+TGG - chr4_4:52817787-52817806 None:intergenic 40.0%
CAACGTAGGAAATGATCTGA+AGG - chr4_4:52817802-52817821 None:intergenic 40.0%
ACAACTACTATGATGACCTC+TGG + chr4_4:52817847-52817866 Msa0687830:CDS 40.0%
CAACTACTATGATGACCTCT+GGG + chr4_4:52817848-52817867 Msa0687830:CDS 40.0%
AACTACTATGATGACCTCTG+GGG + chr4_4:52817849-52817868 Msa0687830:CDS 40.0%
AACTATGTCCGAATTGTAGG+CGG - chr4_4:52818060-52818079 None:intergenic 40.0%
!!! CTAACGCACTTTTGGAATCA+CGG - chr4_4:52818311-52818330 None:intergenic 40.0%
TTGAATGCAGGAACCAACAT+TGG + chr4_4:52818461-52818480 Msa0687830:intron 40.0%
!! ATTGTTGATGGTGCCAATGT+TGG - chr4_4:52818477-52818496 None:intergenic 40.0%
TGATAGTTGCTTCCACCATT+TGG - chr4_4:52818750-52818769 None:intergenic 40.0%
TGTGAACATGTCTAGAGATG+TGG + chr4_4:52818790-52818809 Msa0687830:CDS 40.0%
GTGAACATGTCTAGAGATGT+GGG + chr4_4:52818791-52818810 Msa0687830:CDS 40.0%
TGAACATGTCTAGAGATGTG+GGG + chr4_4:52818792-52818811 Msa0687830:CDS 40.0%
! ATGTGGGGTACTATTGGATA+AGG + chr4_4:52818807-52818826 Msa0687830:CDS 40.0%
TGTTCCGACACACAAAGATA+AGG - chr4_4:52818849-52818868 None:intergenic 40.0%
!! ATTTTTGCAAGAGGAGCATG+TGG + chr4_4:52818902-52818921 Msa0687830:CDS 40.0%
! AGCATGTGGCGCTTTTATAT+CGG + chr4_4:52818916-52818935 Msa0687830:CDS 40.0%
ATGACATTCATGTCCATAGG+AGG + chr4_4:52818944-52818963 Msa0687830:CDS 40.0%
! GAATGATGGAAATCCTCCTA+TGG - chr4_4:52818960-52818979 None:intergenic 40.0%
TGCAGGTCTTCTACAAAGAA+AGG + chr4_4:52819081-52819100 Msa0687830:intron 40.0%
CACTGCTACAAAAGGAAATG+AGG - chr4_4:52819156-52819175 None:intergenic 40.0%
! CAGTGATGTCATTTGCTACA+GGG + chr4_4:52819171-52819190 Msa0687830:CDS 40.0%
! ATGGGATTGATAATTGGAGC+AGG + chr4_4:52819329-52819348 Msa0687830:CDS 40.0%
GGTTACAAAATAGGCGTATC+CGG + chr4_4:52819477-52819496 Msa0687830:intron 40.0%
GGTGAGTTCCTATTAGATGA+CGG + chr4_4:52819506-52819525 Msa0687830:intron 40.0%
AGAAGAATTTGGGAAGATCG+CGG - chr4_4:52819775-52819794 None:intergenic 40.0%
TGCATTCCCCATAATCACTA+AGG - chr4_4:52820171-52820190 None:intergenic 40.0%
TTAGTGATTATGGGGAATGC+AGG + chr4_4:52820170-52820189 Msa0687830:intron 40.0%
TAGTGATTATGGGGAATGCA+GGG + chr4_4:52820171-52820190 Msa0687830:intron 40.0%
GAGTTTGATCCTAAAGAACC+TGG + chr4_4:52820222-52820241 Msa0687830:CDS 40.0%
ATCATCCTCAAAACACTGCT+TGG + chr4_4:52820267-52820286 Msa0687830:CDS 40.0%
! TCATTCCAAGCAGTGTTTTG+AGG - chr4_4:52820275-52820294 None:intergenic 40.0%
GTGTAGATACTGTGAAGGAA+AGG - chr4_4:52820402-52820421 None:intergenic 40.0%
GCTTTGTGTAGATACTGTGA+AGG - chr4_4:52820407-52820426 None:intergenic 40.0%
AAGACAATGGATGCAATGGT+TGG - chr4_4:52820497-52820516 None:intergenic 40.0%
TGAGAAGACAATGGATGCAA+TGG - chr4_4:52820501-52820520 None:intergenic 40.0%
CATCCATTGTCTTCTCAAGA+GGG + chr4_4:52820504-52820523 Msa0687830:CDS 40.0%
AAAGAGGGATGCATCTTGTG+TGG + chr4_4:52812452-52812471 Msa0687830:CDS 45.0%
AAGAGGGATGCATCTTGTGT+GGG + chr4_4:52812453-52812472 Msa0687830:CDS 45.0%
ATGGCTATTATGGGTCCATC+TGG + chr4_4:52812568-52812587 Msa0687830:CDS 45.0%
! ATTATGGGTCCATCTGGTTC+TGG + chr4_4:52812574-52812593 Msa0687830:CDS 45.0%
ACTCTTCTTGATGCTTTGGC+AGG + chr4_4:52812604-52812623 Msa0687830:CDS 45.0%
TCACCTGTCACATTTGAGTG+TGG + chr4_4:52813595-52813614 Msa0687830:intron 45.0%
TTTGAGTGTGGTGGTAGAAG+AGG + chr4_4:52813607-52813626 Msa0687830:intron 45.0%
! TAGAAGAGGTGTGTCACCTA+TGG + chr4_4:52813621-52813640 Msa0687830:intron 45.0%
GTGGATGAACCCTAGTAATC+CGG - chr4_4:52813796-52813815 None:intergenic 45.0%
AGGGTTCATCCACTAGAGAT+CGG + chr4_4:52813803-52813822 Msa0687830:intron 45.0%
TGTCAATCAACCACCGACAA+TGG - chr4_4:52814063-52814082 None:intergenic 45.0%
!! GATGGATGTTGGCTTCGAAA+TGG - chr4_4:52814109-52814128 None:intergenic 45.0%
! TGGCACTTAAGGGGTATAAG+TGG + chr4_4:52816597-52816616 Msa0687830:CDS 45.0%
! CACTTAAGGGGTATAAGTGG+TGG + chr4_4:52816600-52816619 Msa0687830:CDS 45.0%
TTCCTTGATGAGCCAACAAG+TGG + chr4_4:52816678-52816697 Msa0687830:CDS 45.0%
!! AACCACTTGTTGGCTCATCA+AGG - chr4_4:52816683-52816702 None:intergenic 45.0%
TGATGAGCCAACAAGTGGTT+TGG + chr4_4:52816683-52816702 Msa0687830:CDS 45.0%
ACCAGCTGAAAATGCAGTTG+AGG + chr4_4:52816860-52816879 Msa0687830:CDS 45.0%
! ACCTCAACTGCATTTTCAGC+TGG - chr4_4:52816864-52816883 None:intergenic 45.0%
CATGTGAGAATTTCACGCGA+GGG - chr4_4:52817390-52817409 None:intergenic 45.0%
ACATGTGAGAATTTCACGCG+AGG - chr4_4:52817391-52817410 None:intergenic 45.0%
GGGTTTCTTCTACTTGGACA+TGG - chr4_4:52817781-52817800 None:intergenic 45.0%
ACTACTATGATGACCTCTGG+GGG + chr4_4:52817850-52817869 Msa0687830:CDS 45.0%
ATATACATGTGTTCCCCCAG+AGG - chr4_4:52817866-52817885 None:intergenic 45.0%
TTAATCGGTTGACCCCTCAA+CGG + chr4_4:52818029-52818048 Msa0687830:intron 45.0%
! CGTGATTCCAAAAGTGCGTT+AGG + chr4_4:52818309-52818328 Msa0687830:intron 45.0%
! CACAATGCCTAACGCACTTT+TGG - chr4_4:52818319-52818338 None:intergenic 45.0%
AAAGCAAGAGCCAAGCCAAA+TGG + chr4_4:52818732-52818751 Msa0687830:CDS 45.0%
! CTAGAGATGTGGGGTACTAT+TGG + chr4_4:52818801-52818820 Msa0687830:CDS 45.0%
GTCGCCTTATCTTTGTGTGT+CGG + chr4_4:52818842-52818861 Msa0687830:CDS 45.0%
! GCATGTGGCGCTTTTATATC+GGG + chr4_4:52818917-52818936 Msa0687830:CDS 45.0%
! GCAGTGATGTCATTTGCTAC+AGG + chr4_4:52819170-52819189 Msa0687830:CDS 45.0%
TTTGGGCTGTATAGCTGTTG+TGG + chr4_4:52819262-52819281 Msa0687830:CDS 45.0%
ATAGGAACTCACCATCTTGC+CGG - chr4_4:52819499-52819518 None:intergenic 45.0%
! GGTCTTATGATGATGACTGC+TGG + chr4_4:52819734-52819753 Msa0687830:CDS 45.0%
! TGATGACTGCTGGCTATTTC+CGG + chr4_4:52819744-52819763 Msa0687830:CDS 45.0%
GCGATCTTCCCAAATTCTTC+TGG + chr4_4:52819774-52819793 Msa0687830:CDS 45.0%
GGGTAACGCCAGAAGAATTT+GGG - chr4_4:52819785-52819804 None:intergenic 45.0%
AGGGTAACGCCAGAAGAATT+TGG - chr4_4:52819786-52819805 None:intergenic 45.0%
TGGGGATTGCAGGTAAATTC+AGG + chr4_4:52819830-52819849 Msa0687830:intron 45.0%
ATCCGAAGCACACGATCAAA+AGG + chr4_4:52819884-52819903 Msa0687830:intron 45.0%
! GTCCTTTTGATCGTGTGCTT+CGG - chr4_4:52819889-52819908 None:intergenic 45.0%
TTTGGGTCACCAGGTTCTTT+AGG - chr4_4:52820234-52820253 None:intergenic 45.0%
CACTGCAACGTATCAAGAAG+CGG + chr4_4:52820430-52820449 Msa0687830:CDS 45.0%
ACTGCAACGTATCAAGAAGC+GGG + chr4_4:52820431-52820450 Msa0687830:CDS 45.0%
! ATGCAATGGTTGGTGTCTCT+TGG - chr4_4:52820487-52820506 None:intergenic 45.0%
GCATCCATTGTCTTCTCAAG+AGG + chr4_4:52820503-52820522 Msa0687830:CDS 45.0%
AGACCCTCTTGAGAAGACAA+TGG - chr4_4:52820510-52820529 None:intergenic 45.0%
!!! AAAAATAAAACATATTATTT+TGG + chr4_4:52813734-52813753 Msa0687830:intron 5.0%
!!! AAAATAAAACATATTATTTT+GGG + chr4_4:52813735-52813754 Msa0687830:intron 5.0%
!!! AAAATATTATAAAAAGTATT+TGG - chr4_4:52813875-52813894 None:intergenic 5.0%
!! TATATGAATAAAAATTAAAA+TGG - chr4_4:52815081-52815100 None:intergenic 5.0%
!! TAATAAAAACATATTATTAT+AGG - chr4_4:52816381-52816400 None:intergenic 5.0%
!!! TATAAATATTTTTTTTTTAG+AGG + chr4_4:52816992-52817011 Msa0687830:intron 5.0%
!!! ATTATTATTTTTTTTTTGAA+GGG - chr4_4:52817194-52817213 None:intergenic 5.0%
!!! TATTATTATTTTTTTTTTGA+AGG - chr4_4:52817195-52817214 None:intergenic 5.0%
!! AAAAATAATAATAATAACTA+TGG + chr4_4:52817202-52817221 Msa0687830:intron 5.0%
! AAAGAGAGTGTAAGGTGGGG+TGG + chr4_4:52813566-52813585 Msa0687830:intron 50.0%
CCACCACACTCAAATGTGAC+AGG - chr4_4:52813601-52813620 None:intergenic 50.0%
CCTGTCACATTTGAGTGTGG+TGG + chr4_4:52813598-52813617 Msa0687830:intron 50.0%
ACCCAACTCTCCGGATTACT+AGG + chr4_4:52813783-52813802 Msa0687830:intron 50.0%
CCCTAGTAATCCGGAGAGTT+GGG - chr4_4:52813787-52813806 None:intergenic 50.0%
CCCAACTCTCCGGATTACTA+GGG + chr4_4:52813784-52813803 Msa0687830:intron 50.0%
ACCCTAGTAATCCGGAGAGT+TGG - chr4_4:52813788-52813807 None:intergenic 50.0%
GTTCATCCACTAGAGATCGG+AGG + chr4_4:52813806-52813825 Msa0687830:intron 50.0%
GTCAATCCTCCGATCTCTAG+TGG - chr4_4:52813815-52813834 None:intergenic 50.0%
!! TAGGTCTTGTTTGTTGGGCG+TGG - chr4_4:52815445-52815464 None:intergenic 50.0%
! TGGGTCATAGGAGTGTGAGT+AGG - chr4_4:52815464-52815483 None:intergenic 50.0%
! TGCATTTCAGGTAGACTCGC+TGG + chr4_4:52815936-52815955 Msa0687830:intron 50.0%
GCACTGTCCAAACCACTTGT+TGG - chr4_4:52816693-52816712 None:intergenic 50.0%
!! GGTGACTTGATAACGGTCCA+GGG - chr4_4:52816951-52816970 None:intergenic 50.0%
!! TGGTGACTTGATAACGGTCC+AGG - chr4_4:52816952-52816971 None:intergenic 50.0%
TAATCGGTTGACCCCTCAAC+GGG + chr4_4:52818030-52818049 Msa0687830:intron 50.0%
GTTGCTTCCACCATTTGGCT+TGG - chr4_4:52818745-52818764 None:intergenic 50.0%
AATAGGCGTATCCGGCAAGA+TGG + chr4_4:52819485-52819504 Msa0687830:intron 50.0%
TTATGGAGCATGGGGATTGC+AGG + chr4_4:52819820-52819839 Msa0687830:CDS 50.0%
!!! CCTTTCAGTTTTGGGTCACC+AGG - chr4_4:52820243-52820262 None:intergenic 50.0%
CCTGGTGACCCAAAACTGAA+AGG + chr4_4:52820240-52820259 Msa0687830:CDS 50.0%
! AAAATGGTGGGACCTAGCTG+TGG + chr4_4:52820308-52820327 Msa0687830:CDS 50.0%
GGATGAAGATGACCACAGCT+AGG - chr4_4:52820323-52820342 None:intergenic 50.0%
TGTCTCTTGGAAGCGAACGA+TGG - chr4_4:52820474-52820493 None:intergenic 50.0%
AATCGGTTGACCCCTCAACG+GGG + chr4_4:52818031-52818050 Msa0687830:intron 55.0%
GCAAGAGCCAAGCCAAATGG+TGG + chr4_4:52818735-52818754 Msa0687830:CDS 55.0%
! TCAAGAAGCGGGCATCGTTC+AGG + chr4_4:52820442-52820461 Msa0687830:CDS 55.0%
GAGTGTAAGGTGGGGTGGTG+AGG + chr4_4:52813571-52813590 Msa0687830:intron 60.0%
CGGGGACACCGCCTACAATT+CGG + chr4_4:52818049-52818068 Msa0687830:intron 60.0%
TGGGAAGATCGCGGATCTGC+CGG - chr4_4:52819766-52819785 None:intergenic 60.0%
TAGGCGGTGTCCCCGTTGAG+GGG - chr4_4:52818044-52818063 None:intergenic 65.0%
GTAGGCGGTGTCCCCGTTGA+GGG - chr4_4:52818045-52818064 None:intergenic 65.0%
TGTAGGCGGTGTCCCCGTTG+AGG - chr4_4:52818046-52818065 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 52812376 52820548 52812376 ID=Msa0687830;Name=Msa0687830
chr4_4 mRNA 52812376 52820548 52812376 ID=Msa0687830-mRNA-1;Parent=Msa0687830;Name=Msa0687830-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.25|0.11|1|1|1|9|0|688
chr4_4 exon 52812376 52812625 52812376 ID=Msa0687830-mRNA-1:exon:13945;Parent=Msa0687830-mRNA-1
chr4_4 exon 52815946 52816025 52815946 ID=Msa0687830-mRNA-1:exon:13946;Parent=Msa0687830-mRNA-1
chr4_4 exon 52816420 52816881 52816420 ID=Msa0687830-mRNA-1:exon:13947;Parent=Msa0687830-mRNA-1
chr4_4 exon 52817757 52817879 52817757 ID=Msa0687830-mRNA-1:exon:13948;Parent=Msa0687830-mRNA-1
chr4_4 exon 52818471 52818599 52818471 ID=Msa0687830-mRNA-1:exon:13949;Parent=Msa0687830-mRNA-1
chr4_4 exon 52818710 52818994 52818710 ID=Msa0687830-mRNA-1:exon:13950;Parent=Msa0687830-mRNA-1
chr4_4 exon 52819086 52819358 52819086 ID=Msa0687830-mRNA-1:exon:13951;Parent=Msa0687830-mRNA-1
chr4_4 exon 52819734 52819841 52819734 ID=Msa0687830-mRNA-1:exon:13952;Parent=Msa0687830-mRNA-1
chr4_4 exon 52820192 52820548 52820192 ID=Msa0687830-mRNA-1:exon:13953;Parent=Msa0687830-mRNA-1
chr4_4 CDS 52812376 52812625 52812376 ID=Msa0687830-mRNA-1:cds;Parent=Msa0687830-mRNA-1
chr4_4 CDS 52815946 52816025 52815946 ID=Msa0687830-mRNA-1:cds;Parent=Msa0687830-mRNA-1
chr4_4 CDS 52816420 52816881 52816420 ID=Msa0687830-mRNA-1:cds;Parent=Msa0687830-mRNA-1
chr4_4 CDS 52817757 52817879 52817757 ID=Msa0687830-mRNA-1:cds;Parent=Msa0687830-mRNA-1
chr4_4 CDS 52818471 52818599 52818471 ID=Msa0687830-mRNA-1:cds;Parent=Msa0687830-mRNA-1
chr4_4 CDS 52818710 52818994 52818710 ID=Msa0687830-mRNA-1:cds;Parent=Msa0687830-mRNA-1
chr4_4 CDS 52819086 52819358 52819086 ID=Msa0687830-mRNA-1:cds;Parent=Msa0687830-mRNA-1
chr4_4 CDS 52819734 52819841 52819734 ID=Msa0687830-mRNA-1:cds;Parent=Msa0687830-mRNA-1
chr4_4 CDS 52820192 52820548 52820192 ID=Msa0687830-mRNA-1:cds;Parent=Msa0687830-mRNA-1
Gene Sequence

>Msa0687830

ATGGAGATAGAGCAAGACAATGTCAAAGACAATAATAAAGGTGTTAGCAACCCTATTGCAATGATGAGAGGTTCAAAAAGAGGGATGCATCTTGTGTGGGAAGATTTGAGTGTTGTAATTCCAAACTTTGGCAATGGACATACAAGGAGATTGCTTAATGGTTTGAATGGATATGCTGAACCAAACAGAATCATGGCTATTATGGGTCCATCTGGTTCTGGAAAATCTACTCTTCTTGATGCTTTGGCAGGTAGACTCGCTGGAAATGTTATCATGTCTGGTAATGTGCTTTTAAATGGAAAGAAAAGGAGATTAGACTATGGGGTTGTAGCCTATGTGACACAAGAAGACATATTGTTGGGAACACTAACAGTGAGAGAGACAATATCTTACTCAGCAAATTTAAGGCTTCCAGCTACAATGACAAAAGAAGAGGTAAATGACATTGTAGAGGGAACAATTATGGAGATGGGTCTTCAAGATTGTGCTGATAGACTTATAGGAAATTGGCACTTAAGGGGTATAAGTGGTGGAGAAAAGAAAAGAACTAGCATAGCACTTGAAATTCTTACTAGGCCATGTCTCTTGTTCCTTGATGAGCCAACAAGTGGTTTGGACAGTGCCTCAGCATATTTTGTTGCTCAAACTTTAAGAAACATTGCTCATGATGGGAAAACTGTTATTTCTTCAATTCATCAACCAAGTAGTGAGGTTTTTGCATTATTTGATGATCTCTTTCTACTTTCTGGGGGTCAAACAATTTACTTTGGACCAGCTGAAAATGCAGTTGAGTTTTTTGGCAAAGCAGGATTCCCATGTCCAAGTAGAAGAAACCCTTCAGATCATTTCCTACGTTGTATTAATTCAGACTTTGATACTGTCACAACTACTATGATGACCTCTGGGGGAACACATGAACCAACATTGGCACCATCAACAATGAACTTATCAACAGCAGCAATCAAAGCAATACTCATAGAGAAATACCGTTGGTCAGAATATGCAACTTGTGCAAGAGCAAGAATCAAACAAATCTCAAACTTCGAAGGACATGAATATGAAAGTAAAAGCAAGAGCCAAGCCAAATGGTGGAAGCAACTATCAACTTTGACTCATAGATCTTTTGTGAACATGTCTAGAGATGTGGGGTACTATTGGATAAGGTTAACAATCTATGTCGCCTTATCTTTGTGTGTCGGAACAATCTTTTATGACGTTGGATCAAGTTATACAGCTATTTTTGCAAGAGGAGCATGTGGCGCTTTTATATCGGGTTTCATGACATTCATGTCCATAGGAGGATTTCCATCATTCATAGAGGAAATGAAGGTCTTCTACAAAGAAAGGCTGAATGGATATTATGGAATTTCAGTCTACATTCTGTCAAATTTTCTCTCCTCATTTCCTTTTGTAGCAGTGATGTCATTTGCTACAGGGTCTATAACATATTACATGGTTAAGTTTCGATCTGAGTTTTCACATCTTTTGTATATCTGTTTGGATCTTTTGGGCTGTATAGCTGTTGTGGAGAGCTCAATGATGATTATAGCTGCATTGGTTCCCAATTTTCTTATGGGATTGATAATTGGAGCAGGTTATATTGGTCTTATGATGATGACTGCTGGCTATTTCCGGCAGATCCGCGATCTTCCCAAATTCTTCTGGCGTTACCCTATTTCATACATCAATTATGGAGCATGGGGATTGCAGGGAGCTTTCAAGAATGATATGATTGGGATGGAGTTTGATCCTAAAGAACCTGGTGACCCAAAACTGAAAGGAGAGATCATCCTCAAAACACTGCTTGGAATGAAAGTTGATTATTCAAAATGGTGGGACCTAGCTGTGGTCATCTTCATCCTCATGTTGCATAGAGTTATTTTCTTCTTCATTCTCAAAATTAAGGAGAGAGTTGTACCTTTCCTTCACAGTATCTACACAAAGCAAACACTGCAACGTATCAAGAAGCGGGCATCGTTCAGGAAAACGCCATCGTTCGCTTCCAAGAGACACCAACCATTGCATCCATTGTCTTCTCAAGAGGGTCTGAACTCTCCATTTCATTAG
Protein sequence

>Msa0687830

MEIEQDNVKDNNKGVSNPIAMMRGSKRGMHLVWEDLSVVIPNFGNGHTRRLLNGLNGYAEPNRIMAIMGPSGSGKSTLLDALAGRLAGNVIMSGNVLLNGKKRRLDYGVVAYVTQEDILLGTLTVRETISYSANLRLPATMTKEEVNDIVEGTIMEMGLQDCADRLIGNWHLRGISGGEKKRTSIALEILTRPCLLFLDEPTSGLDSASAYFVAQTLRNIAHDGKTVISSIHQPSSEVFALFDDLFLLSGGQTIYFGPAENAVEFFGKAGFPCPSRRNPSDHFLRCINSDFDTVTTTMMTSGGTHEPTLAPSTMNLSTAAIKAILIEKYRWSEYATCARARIKQISNFEGHEYESKSKSQAKWWKQLSTLTHRSFVNMSRDVGYYWIRLTIYVALSLCVGTIFYDVGSSYTAIFARGACGAFISGFMTFMSIGGFPSFIEEMKVFYKERLNGYYGISVYILSNFLSSFPFVAVMSFATGSITYYMVKFRSEFSHLLYICLDLLGCIAVVESSMMIIAALVPNFLMGLIIGAGYIGLMMMTAGYFRQIRDLPKFFWRYPISYINYGAWGLQGAFKNDMIGMEFDPKEPGDPKLKGEIILKTLLGMKVDYSKWWDLAVVIFILMLHRVIFFFILKIKERVVPFLHSIYTKQTLQRIKKRASFRKTPSFASKRHQPLHPLSSQEGLNSPFH*