AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0554360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0554360 MtrunA17_Chr4g0040301 97.203 715 19 1 178 892 18 731 0.0 1435
Msa0554360 MtrunA17_Chr1g0183681 28.757 692 343 16 140 780 381 973 7.92e-88 304
Msa0554360 MtrunA17_Chr5g0393461 30.991 555 313 11 150 686 184 686 1.49e-70 251
Msa0554360 MtrunA17_Chr8g0384531 29.498 617 346 17 108 697 343 897 3.20e-69 249
Msa0554360 MtrunA17_Chr5g0403921 29.338 559 304 15 142 688 176 655 1.17e-63 229
Msa0554360 MtrunA17_Chr1g0163011 29.777 628 336 20 107 694 161 723 7.48e-57 209
Msa0554360 MtrunA17_Chr4g0052341 27.141 619 327 20 150 747 745 1260 9.92e-52 197
Msa0554360 MtrunA17_Chr7g0255821 24.543 656 389 22 138 709 189 822 1.27e-36 148
Msa0554360 MtrunA17_Chr1g0175191 41.520 171 99 1 539 708 1061 1231 5.93e-36 148
Msa0554360 MtrunA17_Chr1g0175191 30.612 294 179 7 140 427 511 785 2.95e-35 145
Msa0554360 MtrunA17_Chr1g0190381 30.411 365 214 9 346 688 4 350 1.74e-33 136
Msa0554360 MtrunA17_Chr3g0095091 43.558 163 86 2 539 695 886 1048 7.29e-33 137
Msa0554360 MtrunA17_Chr3g0095091 26.950 282 170 8 149 419 570 826 6.94e-24 108
Msa0554360 MtrunA17_Chr4g0066651 29.286 280 172 7 149 417 988 1252 1.80e-32 137
Msa0554360 MtrunA17_Chr4g0066651 39.869 153 91 1 539 690 1307 1459 4.70e-29 125
Msa0554360 MtrunA17_Chr5g0442141 31.212 330 189 9 539 844 932 1247 1.88e-32 136
Msa0554360 MtrunA17_Chr5g0442141 28.070 285 169 10 146 419 613 872 1.92e-25 114
Msa0554360 MtrunA17_Chr5g0394201 37.786 262 133 8 539 794 671 908 2.55e-32 135
Msa0554360 MtrunA17_Chr5g0394201 29.245 318 196 11 153 464 366 660 1.11e-31 133
Msa0554360 MtrunA17_Chr8g0348721 31.985 272 165 7 150 414 987 1245 7.71e-32 134
Msa0554360 MtrunA17_Chr8g0348721 43.651 126 70 1 539 663 1312 1437 4.35e-23 106
Msa0554360 MtrunA17_Chr4g0066741 43.709 151 84 1 539 688 488 638 1.28e-31 133
Msa0554360 MtrunA17_Chr4g0066741 31.142 289 171 7 135 419 173 437 1.29e-30 130
Msa0554360 MtrunA17_Chr4g0017211 32.000 275 168 6 150 416 1450 1713 1.80e-31 133
Msa0554360 MtrunA17_Chr4g0017211 43.796 137 74 1 558 691 1830 1966 2.79e-25 113
Msa0554360 MtrunA17_Chr2g0286291 31.579 285 167 5 139 419 180 440 6.95e-31 131
Msa0554360 MtrunA17_Chr2g0286291 45.033 151 82 1 539 688 491 641 5.96e-30 128
Msa0554360 MtrunA17_Chr1g0205891 40.196 204 95 5 530 724 668 853 1.32e-30 130
Msa0554360 MtrunA17_Chr1g0205891 32.234 273 165 9 150 417 376 633 2.67e-30 129
Msa0554360 MtrunA17_Chr7g0257101 37.912 182 109 1 513 690 1161 1342 1.80e-29 127
Msa0554360 MtrunA17_Chr7g0257101 26.829 287 181 9 140 415 568 836 1.36e-24 111
Msa0554360 MtrunA17_Chr7g0248031 32.353 272 165 6 150 414 994 1253 3.11e-29 126
Msa0554360 MtrunA17_Chr7g0248031 44.444 126 69 1 539 663 1320 1445 3.52e-23 106
Msa0554360 MtrunA17_Chr3g0137091 39.080 174 98 3 516 688 594 760 4.96e-28 122
Msa0554360 MtrunA17_Chr3g0137091 30.928 291 149 8 153 418 292 555 1.01e-26 118
Msa0554360 MtrunA17_Chr7g0231521 37.423 163 89 2 540 690 286 447 2.93e-24 109
Msa0554360 MtrunA17_Chr7g0231521 32.075 212 118 6 146 342 35 235 2.38e-19 93.6
Msa0554360 MtrunA17_Chr7g0232121 37.423 163 89 2 540 690 365 526 5.44e-24 108
Msa0554360 MtrunA17_Chr7g0232121 31.229 301 171 11 146 426 35 319 8.81e-24 108
Msa0554360 MtrunA17_Chr1g0168031 37.594 133 83 0 557 689 1004 1136 3.74e-21 99.8
Msa0554360 MtrunA17_Chr1g0168031 28.629 248 129 10 169 387 533 761 5.64e-21 99.4
Msa0554360 MtrunA17_Chr2g0296421 31.579 228 131 6 502 713 801 1019 3.67e-20 96.7
Msa0554360 MtrunA17_Chr2g0296421 27.363 201 115 7 153 333 514 703 4.71e-11 67.0
Msa0554360 MtrunA17_Chr1g0212331 38.095 126 78 0 558 683 887 1012 1.27e-19 94.7
Msa0554360 MtrunA17_Chr1g0190391 29.707 239 119 9 140 343 572 796 1.66e-19 94.4
Msa0554360 MtrunA17_Chr2g0320751 34.667 150 94 1 540 689 854 999 3.73e-19 93.2
Msa0554360 MtrunA17_Chr2g0320751 25.000 304 162 8 169 419 397 687 3.70e-17 86.7
Msa0554360 MtrunA17_Chr2g0281601 37.692 130 81 0 554 683 1146 1275 6.55e-19 92.8
Msa0554360 MtrunA17_Chr4g0069451 31.111 135 93 0 540 674 470 604 9.94e-19 91.3
Msa0554360 MtrunA17_Chr4g0069451 23.824 319 190 11 113 408 132 420 8.36e-13 72.4
Msa0554360 MtrunA17_Chr7g0233021 36.478 159 90 4 554 705 1048 1202 1.06e-17 88.6
Msa0554360 MtrunA17_Chr8g0352361 34.132 167 94 5 554 713 713 870 3.92e-17 86.7
Msa0554360 MtrunA17_Chr8g0352361 26.961 204 118 7 153 336 364 556 2.52e-12 70.9
Msa0554360 MtrunA17_Chr7g0225791 36.879 141 83 2 557 691 1103 1243 7.52e-17 85.9
Msa0554360 MtrunA17_Chr7g0233001 36.170 141 84 2 557 691 338 478 8.41e-17 84.7
Msa0554360 MtrunA17_Chr2g0320781 36.090 133 79 2 557 683 110 242 9.89e-17 80.9
Msa0554360 MtrunA17_Chr4g0047081 36.879 141 83 2 557 691 1053 1193 1.06e-16 85.5
Msa0554360 MtrunA17_Chr4g0024921 32.353 136 92 0 558 693 784 919 1.43e-16 84.7
Msa0554360 MtrunA17_Chr7g0232971 36.806 144 80 4 557 691 1114 1255 1.49e-16 85.1
Msa0554360 MtrunA17_Chr7g0232991 41.121 107 62 1 586 691 511 617 1.22e-15 81.3
Msa0554360 MtrunA17_Chr3g0114161 31.737 167 101 4 549 709 1058 1217 2.44e-15 80.9
Msa0554360 MtrunA17_Chr3g0086111 33.333 123 82 0 549 671 543 665 9.91e-15 79.0
Msa0554360 MtrunA17_Chr3g0086111 26.736 288 164 15 125 393 161 420 5.71e-11 66.6
Msa0554360 MtrunA17_Chr1g0191141 30.539 167 103 4 549 709 913 1072 3.70e-14 77.0
Msa0554360 MtrunA17_Chr5g0437621 32.374 139 88 2 557 689 1122 1260 5.34e-14 76.6
Msa0554360 MtrunA17_Chr7g0224051 30.539 167 103 4 549 709 927 1086 1.22e-13 75.5
Msa0554360 MtrunA17_Chr7g0233031 39.796 98 58 1 595 691 1105 1202 1.86e-13 74.7
Msa0554360 MtrunA17_Chr5g0428401 29.012 162 100 4 541 690 1476 1634 7.39e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0554360 AT1G03750.1 65.197 862 251 10 44 889 34 862 0.0 1124
Msa0554360 AT2G18760.4 29.051 685 340 14 140 783 375 954 1.26e-89 309
Msa0554360 AT2G18760.1 29.051 685 340 14 140 783 375 954 1.26e-89 309
Msa0554360 AT2G18760.2 29.051 685 340 14 140 783 375 954 1.26e-89 309
Msa0554360 AT2G18760.7 29.051 685 340 14 140 783 375 954 1.26e-89 309
Msa0554360 AT2G18760.5 29.051 685 340 14 140 783 375 954 1.26e-89 309
Msa0554360 AT2G18760.6 29.051 685 340 14 140 783 375 954 1.26e-89 309
Msa0554360 AT2G18760.3 29.051 685 340 14 140 783 434 1013 1.81e-89 310
Msa0554360 AT3G19210.3 32.767 589 311 18 126 686 151 682 2.47e-77 268
Msa0554360 AT3G19210.1 32.767 589 311 18 126 686 151 682 1.64e-76 268
Msa0554360 AT3G19210.2 32.428 589 311 18 126 686 151 680 7.04e-74 261
Msa0554360 AT5G63950.1 28.843 579 331 14 142 697 369 889 4.76e-70 252
Msa0554360 AT5G63950.2 28.496 565 334 13 142 697 369 872 1.82e-66 241
Msa0554360 AT5G66750.1 30.824 558 297 15 143 689 195 674 2.39e-62 226
Msa0554360 AT3G54280.1 31.023 577 312 17 146 691 1447 1968 2.74e-60 224
Msa0554360 AT3G54280.2 30.729 576 315 16 146 691 1478 1999 4.53e-60 224
Msa0554360 AT2G13370.1 30.335 567 291 18 146 695 621 1100 1.40e-59 222
Msa0554360 AT2G13370.2 30.335 567 291 18 146 695 621 1100 1.40e-59 222
Msa0554360 AT2G13370.3 30.335 567 291 18 146 695 621 1100 1.40e-59 222
Msa0554360 AT4G31900.3 30.000 560 276 15 142 688 217 673 3.49e-59 220
Msa0554360 AT4G31900.1 30.000 560 276 15 142 688 217 673 3.99e-59 220
Msa0554360 AT4G31900.2 30.000 560 276 15 142 688 176 632 5.19e-59 219
Msa0554360 AT2G02090.1 28.697 568 314 15 153 683 216 729 1.49e-52 197
Msa0554360 AT5G44800.1 27.895 570 300 16 150 700 689 1166 1.20e-50 195
Msa0554360 AT3G12810.1 40.936 171 100 1 539 708 1074 1244 5.33e-36 148
Msa0554360 AT3G12810.1 30.303 297 176 8 140 427 526 800 2.84e-34 143
Msa0554360 AT3G12810.2 40.936 171 100 1 539 708 1070 1240 5.42e-36 148
Msa0554360 AT3G12810.2 30.303 297 176 8 140 427 522 796 2.63e-34 143
Msa0554360 AT1G02670.6 27.320 571 310 23 169 683 116 637 1.59e-34 141
Msa0554360 AT1G02670.3 27.320 571 310 23 169 683 143 664 2.13e-34 141
Msa0554360 AT1G02670.7 26.465 563 302 20 169 683 143 641 5.12e-34 140
Msa0554360 AT1G02670.1 26.465 563 302 20 169 683 154 652 5.40e-34 140
Msa0554360 AT5G19310.2 33.333 276 157 9 150 417 122 378 7.29e-34 140
Msa0554360 AT5G19310.2 40.642 187 92 4 539 724 430 598 1.04e-30 130
Msa0554360 AT5G19310.1 33.333 276 157 9 150 417 386 642 8.68e-34 140
Msa0554360 AT5G19310.1 40.860 186 91 4 540 724 695 862 2.06e-30 130
Msa0554360 AT3G06010.1 32.246 276 167 8 150 420 403 663 1.42e-33 140
Msa0554360 AT3G06010.1 40.642 187 92 4 539 724 712 880 2.27e-30 130
Msa0554360 AT1G08600.4 41.935 186 88 3 519 684 1088 1273 1.01e-31 134
Msa0554360 AT1G08600.4 27.564 312 184 10 140 420 709 1009 1.40e-24 111
Msa0554360 AT1G08600.3 41.935 186 88 3 519 684 1088 1273 1.01e-31 134
Msa0554360 AT1G08600.3 27.564 312 184 10 140 420 709 1009 1.40e-24 111
Msa0554360 AT1G08600.2 41.935 186 88 3 519 684 1088 1273 1.01e-31 134
Msa0554360 AT1G08600.2 27.564 312 184 10 140 420 709 1009 1.40e-24 111
Msa0554360 AT1G08600.1 41.935 186 88 3 519 684 1067 1252 1.10e-31 134
Msa0554360 AT1G08600.1 28.716 296 180 8 140 420 709 988 2.78e-24 110
Msa0554360 AT1G02670.5 27.140 549 295 23 169 661 116 615 1.40e-31 132
Msa0554360 AT1G02670.2 27.140 549 295 23 169 661 143 642 1.76e-31 132
Msa0554360 AT2G28290.3 41.830 153 88 1 539 690 1072 1224 2.01e-31 134
Msa0554360 AT2G28290.3 29.682 283 173 7 146 417 750 1017 3.73e-30 130
Msa0554360 AT2G28290.4 41.830 153 88 1 539 690 1072 1224 2.01e-31 134
Msa0554360 AT2G28290.4 29.682 283 173 7 146 417 750 1017 3.73e-30 130
Msa0554360 AT2G28290.6 41.830 153 88 1 539 690 1073 1225 2.03e-31 134
Msa0554360 AT2G28290.6 29.682 283 173 7 146 417 751 1018 3.73e-30 130
Msa0554360 AT2G28290.2 41.830 153 88 1 539 690 1072 1224 2.12e-31 134
Msa0554360 AT2G28290.2 29.682 283 173 7 146 417 750 1017 3.66e-30 130
Msa0554360 AT2G28290.1 41.830 153 88 1 539 690 1072 1224 2.21e-31 134
Msa0554360 AT2G28290.1 29.682 283 173 7 146 417 750 1017 3.77e-30 130
Msa0554360 AT2G28290.5 41.830 153 88 1 539 690 1073 1225 2.21e-31 134
Msa0554360 AT2G28290.5 29.682 283 173 7 146 417 751 1018 3.80e-30 130
Msa0554360 AT5G18620.1 31.293 294 173 6 130 419 175 443 1.73e-30 130
Msa0554360 AT5G18620.1 42.763 152 86 1 538 688 493 644 1.13e-28 124
Msa0554360 AT5G18620.2 31.293 294 173 6 130 419 175 443 1.78e-30 130
Msa0554360 AT5G18620.2 42.763 152 86 1 538 688 493 644 1.16e-28 124
Msa0554360 AT2G46020.5 30.389 283 178 7 139 414 969 1239 5.34e-30 129
Msa0554360 AT2G46020.5 41.270 126 73 1 539 663 1306 1431 4.23e-21 100
Msa0554360 AT2G46020.1 30.389 283 178 7 139 414 969 1239 5.34e-30 129
Msa0554360 AT2G46020.1 41.270 126 73 1 539 663 1306 1431 4.23e-21 100
Msa0554360 AT2G46020.6 30.389 283 178 7 139 414 969 1239 5.34e-30 129
Msa0554360 AT2G46020.6 41.270 126 73 1 539 663 1306 1431 4.23e-21 100
Msa0554360 AT2G46020.2 30.986 284 176 7 139 414 969 1240 8.71e-30 128
Msa0554360 AT2G46020.2 41.270 126 73 1 539 663 1307 1432 3.95e-21 100
Msa0554360 AT2G46020.3 30.986 284 176 7 139 414 969 1240 8.71e-30 128
Msa0554360 AT2G46020.3 41.270 126 73 1 539 663 1307 1432 3.95e-21 100
Msa0554360 AT2G46020.4 30.986 284 176 7 139 414 969 1240 8.71e-30 128
Msa0554360 AT2G46020.4 41.270 126 73 1 539 663 1307 1432 3.95e-21 100
Msa0554360 AT3G06400.2 43.421 152 85 1 538 688 488 639 1.21e-29 127
Msa0554360 AT3G06400.2 28.440 327 181 6 97 419 161 438 1.65e-25 114
Msa0554360 AT3G06400.1 43.421 152 85 1 538 688 488 639 1.22e-29 127
Msa0554360 AT3G06400.1 28.440 327 181 6 97 419 161 438 1.55e-25 114
Msa0554360 AT3G06400.3 43.421 152 85 1 538 688 488 639 1.30e-29 127
Msa0554360 AT3G06400.3 28.440 327 181 6 97 419 161 438 1.80e-25 114
Msa0554360 AT2G25170.1 36.321 212 120 5 527 737 584 781 1.41e-29 127
Msa0554360 AT2G25170.1 28.610 374 187 12 119 462 261 584 5.92e-26 115
Msa0554360 AT2G25170.4 36.321 212 120 5 527 737 584 781 1.41e-29 127
Msa0554360 AT2G25170.4 28.610 374 187 12 119 462 261 584 5.92e-26 115
Msa0554360 AT2G25170.3 36.321 212 120 5 527 737 610 807 1.80e-29 127
Msa0554360 AT2G25170.3 28.610 374 187 12 119 462 287 610 5.59e-26 115
Msa0554360 AT2G25170.2 36.321 212 120 5 527 737 601 798 1.81e-29 127
Msa0554360 AT2G25170.2 28.610 374 187 12 119 462 278 601 5.96e-26 115
Msa0554360 AT3G57300.1 39.474 152 92 0 539 690 1205 1356 6.91e-28 122
Msa0554360 AT3G57300.1 25.000 408 261 13 20 415 470 844 9.66e-26 115
Msa0554360 AT3G57300.4 39.474 152 92 0 539 690 1205 1356 6.91e-28 122
Msa0554360 AT3G57300.4 25.000 408 261 13 20 415 470 844 9.66e-26 115
Msa0554360 AT3G57300.2 39.474 152 92 0 539 690 1238 1389 7.62e-28 122
Msa0554360 AT3G57300.2 23.864 440 259 14 20 415 470 877 1.69e-22 104
Msa0554360 AT2G44980.1 40.000 165 98 1 536 699 364 528 4.54e-27 119
Msa0554360 AT2G44980.1 31.507 292 167 10 146 423 47 319 3.71e-24 109
Msa0554360 AT2G44980.3 31.438 299 166 12 146 423 47 327 1.30e-26 117
Msa0554360 AT2G44980.3 37.143 175 99 1 536 699 372 546 6.32e-26 115
Msa0554360 AT2G44980.2 37.143 175 99 1 536 699 373 547 5.96e-26 115
Msa0554360 AT2G44980.2 31.000 300 167 13 146 423 47 328 6.67e-24 108
Msa0554360 AT3G57300.3 25.000 408 261 13 20 415 470 844 8.07e-26 115
Msa0554360 AT3G16600.1 27.622 286 144 10 143 387 46 309 1.87e-23 106
Msa0554360 AT1G11100.5 28.269 283 144 9 150 387 399 667 1.14e-21 102
Msa0554360 AT1G11100.5 35.938 128 82 0 556 683 928 1055 3.83e-19 93.6
Msa0554360 AT5G43530.1 38.028 142 86 1 542 683 1115 1254 1.80e-21 101
Msa0554360 AT5G43530.1 26.298 289 165 10 169 424 681 954 3.21e-21 100
Msa0554360 AT1G11100.1 28.269 283 144 9 150 387 542 810 1.87e-21 101
Msa0554360 AT1G11100.1 35.938 128 82 0 556 683 1071 1198 5.41e-19 93.2
Msa0554360 AT5G22750.1 34.899 149 97 0 541 689 864 1012 1.57e-19 95.1
Msa0554360 AT5G22750.1 25.581 301 161 8 169 419 413 700 2.64e-19 94.4
Msa0554360 AT1G11100.3 35.938 128 82 0 556 683 972 1099 3.50e-19 94.0
Msa0554360 AT1G11100.2 35.938 128 82 0 556 683 1114 1241 4.97e-19 93.6
Msa0554360 AT1G11100.4 35.938 128 82 0 556 683 1115 1242 5.46e-19 93.2
Msa0554360 AT3G20010.2 38.095 126 78 0 558 683 603 728 6.82e-19 92.4
Msa0554360 AT3G20010.3 38.095 126 78 0 558 683 628 753 6.87e-19 92.4
Msa0554360 AT1G61140.3 35.938 128 82 0 556 683 965 1092 7.74e-19 92.8
Msa0554360 AT1G61140.1 35.938 128 82 0 556 683 1123 1250 7.77e-19 92.8
Msa0554360 AT3G20010.1 38.095 126 78 0 558 683 894 1019 1.49e-18 91.7
Msa0554360 AT3G20010.5 38.095 126 78 0 558 683 894 1019 1.49e-18 91.7
Msa0554360 AT3G20010.7 38.095 126 78 0 558 683 894 1019 1.49e-18 91.7
Msa0554360 AT5G05130.1 36.184 152 94 2 558 706 727 878 1.71e-18 91.3
Msa0554360 AT5G05130.1 23.549 293 165 9 169 417 279 556 4.37e-17 87.0
Msa0554360 AT1G50410.2 35.714 126 81 0 558 683 828 953 4.69e-18 90.1
Msa0554360 AT1G50410.1 35.714 126 81 0 558 683 828 953 4.69e-18 90.1
Msa0554360 AT1G50410.3 35.714 126 81 0 558 683 828 953 4.69e-18 90.1
Msa0554360 AT1G48310.1 31.544 149 100 1 539 687 467 613 1.34e-17 88.2
Msa0554360 AT1G48310.1 26.749 243 136 9 113 333 130 352 6.64e-13 73.2
Msa0554360 AT1G02670.4 36.066 183 92 8 169 335 143 316 1.37e-17 87.8
Msa0554360 AT1G48310.2 31.544 149 100 1 539 687 472 618 1.44e-17 88.2
Msa0554360 AT1G48310.2 26.749 243 136 9 113 333 135 357 6.79e-13 73.2
Msa0554360 AT1G48310.3 31.544 149 100 1 539 687 467 613 2.18e-17 87.4
Msa0554360 AT1G48310.3 26.749 243 136 9 113 333 130 352 1.55e-12 72.0
Msa0554360 AT1G05120.1 33.824 136 90 0 558 693 682 817 1.01e-16 85.5
Msa0554360 AT1G05120.2 33.824 136 90 0 558 693 725 860 1.02e-16 85.9
Msa0554360 AT1G05490.1 34.532 139 85 2 557 689 1216 1354 1.30e-16 85.5
Msa0554360 AT3G24340.1 36.806 144 85 3 557 694 944 1087 1.03e-15 82.8
Msa0554360 AT2G16390.2 39.024 123 70 2 554 671 711 833 1.56e-15 82.0
Msa0554360 AT2G16390.1 39.024 123 70 2 554 671 708 830 1.71e-15 81.6
Msa0554360 AT2G21450.3 34.437 151 94 1 541 686 530 680 1.06e-14 79.0
Msa0554360 AT2G21450.1 34.437 151 94 1 541 686 621 771 1.20e-14 79.0
Msa0554360 AT2G21450.2 34.437 151 94 2 541 686 628 778 1.22e-14 79.0
Msa0554360 AT3G42670.4 32.704 159 94 4 557 709 1075 1226 1.66e-14 79.0
Msa0554360 AT3G42670.2 32.704 159 94 4 557 709 1073 1224 1.76e-14 78.6
Msa0554360 AT3G42670.3 32.704 159 94 4 557 709 1073 1224 1.76e-14 78.6
Msa0554360 AT3G42670.1 32.704 159 94 4 557 709 1073 1224 1.76e-14 78.6
Msa0554360 AT5G20420.1 36.429 140 81 4 557 689 1079 1217 2.67e-14 78.2
Msa0554360 AT5G07810.1 35.088 114 74 0 558 671 556 669 1.48e-13 75.5
Msa0554360 AT1G48310.4 26.749 243 136 9 113 333 130 352 8.80e-13 72.4

Find 221 sgRNAs with CRISPR-Local

Find 432 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTTCACACACTTTATTTC+TGG 0.152298 4_1:+51615748 None:intergenic
GCATTTCTTGCTGCCATATT+TGG 0.166507 4_1:-51613972 Msa0554360:CDS
TTGACCTCTGACCATGTTTA+AGG 0.196528 4_1:+51613484 None:intergenic
ACTCTGCAAGGAGGCTAAAT+TGG 0.199786 4_1:+51610252 None:intergenic
GTCTCCTTCTTTACCAAATA+TGG 0.224688 4_1:+51613959 None:intergenic
GTGGTGGGCAAGAGAGGATT+TGG 0.228532 4_1:+51615912 None:intergenic
TAGCCTCCTTGCAGAGTCTA+TGG 0.243019 4_1:-51610246 Msa0554360:CDS
TACTTGTTGTTCTTGGGTTT+GGG 0.246469 4_1:+51615819 None:intergenic
CTCTCAAACATTGCTGTCTC+TGG 0.257303 4_1:-51611254 Msa0554360:CDS
GGATTTGATATATGATAAAT+TGG 0.258903 4_1:-51613799 Msa0554360:CDS
TTACTTGTTGTTCTTGGGTT+TGG 0.263234 4_1:+51615818 None:intergenic
ACGTCTTCAAATTCAATATC+TGG 0.269463 4_1:+51610889 None:intergenic
GGCTGAAAAGGTGGGTCATC+AGG 0.277598 4_1:+51615871 None:intergenic
TGTTTGTCAGGGTCATCTTT+GGG 0.277800 4_1:+51612143 None:intergenic
GCATCTTTAACTTGTTTGTC+AGG 0.288648 4_1:+51612131 None:intergenic
CATCATCCATTATTCAAAAC+TGG 0.289541 4_1:-51613881 Msa0554360:CDS
GAATCCCTCACAAGACTTAC+AGG 0.293933 4_1:-51611390 Msa0554360:CDS
CTCTGATGGTGAACTTCCTT+TGG 0.297442 4_1:-51615659 Msa0554360:CDS
CTGCGACGATATGGTCTTAC+TGG 0.298138 4_1:-51613612 Msa0554360:CDS
TTGTTTGTCAGGGTCATCTT+TGG 0.298511 4_1:+51612142 None:intergenic
AAAATAAAAGTTATGATGTT+TGG 0.304272 4_1:+51609995 None:intergenic
AAGTTTGCTGCTGCTGTCTA+TGG 0.305035 4_1:-51612107 Msa0554360:CDS
TGATTTGTACAAGAATAATA+AGG 0.311275 4_1:-51614881 Msa0554360:CDS
TCAGGGTCATCTTTGGGGTT+TGG 0.313078 4_1:+51612149 None:intergenic
CAGATTCAATTTGATCATAC+TGG 0.314349 4_1:-51615706 Msa0554360:CDS
ATTCTGGTTTCTTCCTTTCA+TGG 0.314562 4_1:+51610324 None:intergenic
ATTAAAACCCTGCGACGATA+TGG 0.325967 4_1:-51613621 Msa0554360:CDS
TGGTGAACTTCCTTTGGTTC+AGG 0.327763 4_1:-51615653 Msa0554360:intron
CGCTTTCGCCATCGCTTGAA+AGG 0.346282 4_1:+51610366 None:intergenic
CCGGTTTGCACCATGATAAA+TGG 0.352916 4_1:+51613821 None:intergenic
TTTCAGGATGCTGGACATAC+TGG 0.356832 4_1:-51611685 Msa0554360:intron
GTGATTGTGATTGTGATTGT+TGG 0.360237 4_1:+51616007 None:intergenic
CTGTACCAGATGGAGCTATT+TGG 0.361393 4_1:-51613188 Msa0554360:CDS
TGGTGGGCAAGAGAGGATTT+GGG 0.361662 4_1:+51615913 None:intergenic
GAAATTTGAAACAGGGGTCT+TGG 0.363455 4_1:-51614014 Msa0554360:intron
GCAATTTGGACAAATCTATC+AGG 0.366294 4_1:+51613456 None:intergenic
AAGGTAGGTCCTTGTTTATA+AGG 0.369061 4_1:+51613256 None:intergenic
TTGAGATATACTTGTTTGCT+TGG 0.370262 4_1:+51611564 None:intergenic
GGTGGGCAAGAGAGGATTTG+GGG 0.378252 4_1:+51615914 None:intergenic
AATAATAAGGGAGGCATCCT+TGG 0.383571 4_1:-51614868 Msa0554360:CDS
TACTGCTTCTCAAGACTTGA+TGG 0.385087 4_1:-51611639 Msa0554360:CDS
CCATTTATCATGGTGCAAAC+CGG 0.391880 4_1:-51613821 Msa0554360:CDS
CCACCAACTAAGTCAATGTC+TGG 0.395022 4_1:+51612083 None:intergenic
CACCAGCACGAGTTGATATC+AGG 0.397103 4_1:+51611468 None:intergenic
AAGAAATGCTATTGTTTGAA+TGG 0.401109 4_1:+51613986 None:intergenic
GCATGGAAGGACAATACAAT+AGG 0.408321 4_1:+51613119 None:intergenic
CAGGACAGGTCCTTTCGATA+TGG 0.410442 4_1:-51611365 Msa0554360:CDS
TCAACTCGTGCTGGTGGGCT+CGG 0.416911 4_1:-51611461 Msa0554360:CDS
TGACCTCTGACCATGTTTAA+GGG 0.421710 4_1:+51613485 None:intergenic
CATTGCTGTCTCTGGGAAGA+TGG 0.424081 4_1:-51611246 Msa0554360:CDS
TCGTAATATTTGATCCCAAC+TGG 0.424506 4_1:-51611412 Msa0554360:CDS
AGAACTAGTTTATTCTCGTC+AGG 0.425773 4_1:-51611291 Msa0554360:CDS
CATGCAGAATGAGAGTTTCC+TGG 0.427298 4_1:-51612057 Msa0554360:CDS
TTTATAAGGCACTGAATGTC+AGG 0.429149 4_1:+51613270 None:intergenic
TATGATAAATTGGAAGCAAA+TGG 0.429781 4_1:-51613789 Msa0554360:CDS
AACTAATTTACGCCAGTCTC+TGG 0.429787 4_1:-51611607 Msa0554360:CDS
TTAGTTGCACCTGGATCCCT+TGG 0.431876 4_1:-51613543 Msa0554360:CDS
AGGAAATCGCGGGGCTGAAA+AGG 0.432686 4_1:+51615859 None:intergenic
CTCTGCAAGGAGGCTAAATT+GGG 0.434237 4_1:+51610253 None:intergenic
TGATTGTGATTGTGATTGTT+GGG 0.436805 4_1:+51616008 None:intergenic
AATCCTGTAAGTGTCAAAAC+TGG 0.440969 4_1:+51613749 None:intergenic
TTCAGCGTTGCCATTTATCA+TGG 0.444926 4_1:-51613831 Msa0554360:CDS
GGGTTTGGGAATGGTTATGT+TGG 0.445378 4_1:+51615833 None:intergenic
GATGGGCAAATTATTAATAC+AGG 0.447610 4_1:+51613900 None:intergenic
GTATTCCGTCTTCTCTCAGC+TGG 0.449657 4_1:-51611323 Msa0554360:CDS
GACAAAAGCAAAGGCTCAAA+AGG 0.449714 4_1:+51615682 None:intergenic
GTGGGTCATCAGGGTCTTCA+AGG 0.451133 4_1:+51615881 None:intergenic
CACTCGCGTCTCGCTAAGAA+TGG 0.451862 4_1:+51613935 None:intergenic
CAGGATTGCAAAGCATTTCA+AGG 0.452568 4_1:-51611117 Msa0554360:CDS
GGCCCAGACATTGACTTAGT+TGG 0.454701 4_1:-51612086 Msa0554360:CDS
GACCATAGGGCATCTTATGA+TGG 0.456154 4_1:-51613367 Msa0554360:CDS
GTTCCAGTGTATATCTGATA+AGG 0.456164 4_1:+51613713 None:intergenic
GAGAAATTTATCATAAGAAA+AGG 0.456353 4_1:-51611663 Msa0554360:CDS
CATGGAAGGACAATACAATA+GGG 0.459013 4_1:+51613120 None:intergenic
CTCAAGTTGAATGTTGCAAA+AGG 0.463260 4_1:-51613212 Msa0554360:CDS
GTTGTTCTTGGGTTTGGGAA+TGG 0.464124 4_1:+51615824 None:intergenic
GCTTTCGCCATCGCTTGAAA+GGG 0.464407 4_1:+51610367 None:intergenic
GAGAGCTTGCATTTAGCAAA+TGG 0.467611 4_1:-51610217 Msa0554360:CDS
CCTTGCAGAGTCTATGGGCA+TGG 0.468152 4_1:-51610240 Msa0554360:CDS
TGGAATCGAAATCGCGGAGA+AGG 0.472990 4_1:+51615959 None:intergenic
CATCTTTAACTTGTTTGTCA+GGG 0.474207 4_1:+51612132 None:intergenic
ATCTTTGATTTAGTTGCACC+TGG 0.474759 4_1:-51613552 Msa0554360:CDS
ATGCCTTGTCAAGCTACAAC+AGG 0.474905 4_1:-51613100 Msa0554360:intron
AGAAGATGAGGAGGAAGAAG+AGG 0.475233 4_1:-51615776 Msa0554360:CDS
ATCGCTTGAAAGGGTGCTGC+TGG 0.477053 4_1:+51610376 None:intergenic
TCTTGTGAGGGATTCCAGTT+GGG 0.478018 4_1:+51611398 None:intergenic
CTTCAAGGAGACGAAGGTGG+TGG 0.480319 4_1:+51615896 None:intergenic
TCCCGCGTTCCAAGGGATCC+AGG 0.481425 4_1:+51613534 None:intergenic
GCTGCCATATTTGGTAAAGA+AGG 0.482240 4_1:-51613963 Msa0554360:CDS
GTGGGCAAGAGAGGATTTGG+GGG 0.483893 4_1:+51615915 None:intergenic
GGTTTGGGAATGGTTATGTT+GGG 0.485999 4_1:+51615834 None:intergenic
GGCACTGAATGTCAGGAAGC+TGG 0.490234 4_1:+51613277 None:intergenic
GATAACTGCCTTTGAATCAC+TGG 0.490666 4_1:+51610401 None:intergenic
CATTTATCATGGTGCAAACC+GGG 0.495575 4_1:-51613820 Msa0554360:CDS
CAGTAAGACCATATCGTCGC+AGG 0.505047 4_1:+51613613 None:intergenic
CTCTTCCTTTCATCAATCAA+AGG 0.505713 4_1:+51610278 None:intergenic
AGAAGGGATTGTGAGGAAGA+TGG 0.508201 4_1:+51615976 None:intergenic
AGGTTATCTTTGTGAAGGTA+AGG 0.510107 4_1:+51613165 None:intergenic
TTTGACACTTACAGGATTCA+CGG 0.511765 4_1:-51613744 Msa0554360:CDS
CTGATATCAACTCGTGCTGG+TGG 0.512174 4_1:-51611467 Msa0554360:CDS
CCAGACATTGACTTAGTTGG+TGG 0.513306 4_1:-51612083 Msa0554360:CDS
AGTCTACAGTTTATAGATGC+AGG 0.513326 4_1:+51614940 None:intergenic
GGGAATGGTTATGTTGGGAA+AGG 0.513965 4_1:+51615839 None:intergenic
GTTTGTCAGGGTCATCTTTG+GGG 0.517850 4_1:+51612144 None:intergenic
TGGGCAAGAGAGGATTTGGG+GGG 0.518058 4_1:+51615916 None:intergenic
AGCCTCCTTGCAGAGTCTAT+GGG 0.519253 4_1:-51610245 Msa0554360:CDS
ACGAAGGTGGTGGGCAAGAG+AGG 0.519445 4_1:+51615906 None:intergenic
ATTTATCATATATCAAATCC+CGG 0.519671 4_1:+51613802 None:intergenic
GGAAGTGTTCCCGCGTTCCA+AGG 0.520430 4_1:+51613526 None:intergenic
ACCTGGATCCCTTGGAACGC+GGG 0.521957 4_1:-51613535 Msa0554360:CDS
AGAGACTGGCGTAAATTAGT+TGG 0.523151 4_1:+51611609 None:intergenic
CTGCCTTTGAATCACTGGTC+GGG 0.523383 4_1:+51610406 None:intergenic
AAATCGCGGGGCTGAAAAGG+TGG 0.523444 4_1:+51615862 None:intergenic
CACAAAGATAACCTCGATGA+TGG 0.523793 4_1:-51613156 Msa0554360:CDS
ACCATAGGGCATCTTATGAT+GGG 0.525258 4_1:-51613366 Msa0554360:CDS
TCATGGACTAAAGTGCTGCT+TGG 0.525522 4_1:+51610341 None:intergenic
GTCTTGTGAGGGATTCCAGT+TGG 0.526276 4_1:+51611397 None:intergenic
CCCCATCATAAGATGCCCTA+TGG 0.526454 4_1:+51613365 None:intergenic
TTGAAAAGCTGTTGTTGTCA+TGG 0.528651 4_1:-51611995 Msa0554360:CDS
GGAATCGAAATCGCGGAGAA+GGG 0.530035 4_1:+51615960 None:intergenic
ATGGATGACAAGACAAATGC+AGG 0.531654 4_1:-51610107 Msa0554360:three_prime_UTR
TAAGGCCAAATAGCTCCATC+TGG 0.531866 4_1:+51613183 None:intergenic
CGCAGATTCAGAACATGACC+TGG 0.533240 4_1:+51610927 None:intergenic
TGAAATCATCAACCAGAGAC+TGG 0.535016 4_1:+51611595 None:intergenic
GACCTCTGACCATGTTTAAG+GGG 0.537101 4_1:+51613486 None:intergenic
AGGACAAAGGAAGAGACCAT+AGG 0.540752 4_1:-51613381 Msa0554360:CDS
TCTCAAACATTGCTGTCTCT+GGG 0.544151 4_1:-51611253 Msa0554360:CDS
CAACATTCAACTTGAGTGAG+AGG 0.544717 4_1:+51613219 None:intergenic
TTAATAAATATATGTTGAGA+AGG 0.545802 4_1:-51613401 Msa0554360:CDS
AGCAGCACCCTTTCAAGCGA+TGG 0.545842 4_1:-51610374 Msa0554360:CDS
TGTTGTAGCTTGACAAGGCA+TGG 0.545935 4_1:+51613102 None:intergenic
TTCCTGATATCAACTCGTGC+TGG 0.550502 4_1:-51611470 Msa0554360:CDS
TAACTAATTCAATTTGTACA+AGG 0.551528 4_1:+51610033 None:intergenic
AGGTTAAGCAGTGATTCTCA+TGG 0.552094 4_1:-51610126 Msa0554360:exon
GGACAAAGGAAGAGACCATA+GGG 0.552411 4_1:-51613380 Msa0554360:CDS
CTCACAAGACTTACAGGCTC+AGG 0.553116 4_1:-51611384 Msa0554360:CDS
ATGCAGAATGAGAGTTTCCT+GGG 0.554920 4_1:-51612056 Msa0554360:CDS
GAAGTGTTCCCGCGTTCCAA+GGG 0.555939 4_1:+51613527 None:intergenic
TGATTATTGATGAGGCTCAT+CGG 0.558125 4_1:-51613686 Msa0554360:CDS
ATGCGATTCAACGATCTCAC+TGG 0.558770 4_1:+51611041 None:intergenic
GATTTGTACAAGAATAATAA+GGG 0.558836 4_1:-51614880 Msa0554360:CDS
ACTGCTTCTCAAGACTTGAT+GGG 0.560583 4_1:-51611638 Msa0554360:CDS
CTGAGCCTGTAAGTCTTGTG+AGG 0.564920 4_1:+51611385 None:intergenic
GTGAACCAGCTGAGAGAAGA+CGG 0.565741 4_1:+51611318 None:intergenic
CTTGCAGAGTCTATGGGCAT+GGG 0.568370 4_1:-51610239 Msa0554360:CDS
AGGATTGCAAAGCATTTCAA+GGG 0.569360 4_1:-51611116 Msa0554360:CDS
CAAAGGAAGTTCACCATCAG+AGG 0.572213 4_1:+51615660 None:intergenic
CACCTGGATCCCTTGGAACG+CGG 0.573970 4_1:-51613536 Msa0554360:CDS
GCTGAAAAGGTGGGTCATCA+GGG 0.574385 4_1:+51615872 None:intergenic
CCTTTCGATATGGACAGAAA+CGG 0.575975 4_1:-51611355 Msa0554360:CDS
CGACACGGTTTGCACTGACA+AGG 0.579908 4_1:+51611432 None:intergenic
AAATTCCTTTGATTGATGAA+AGG 0.579913 4_1:-51610283 Msa0554360:CDS
CATCGAGGTTATCTTTGTGA+AGG 0.579921 4_1:+51613160 None:intergenic
ATCATCCATTATTCAAAACT+GGG 0.580457 4_1:-51613880 Msa0554360:CDS
GATGTCGCTGCAAACTCTGA+AGG 0.580618 4_1:-51616055 Msa0554360:CDS
CTGCTTGAGCATCAGAGAGT+GGG 0.580634 4_1:-51614919 Msa0554360:CDS
GTAGCTTGACAAGGCATGGA+AGG 0.581555 4_1:+51613106 None:intergenic
CATTCTTAGCGAGACGCGAG+TGG 0.581774 4_1:-51613934 Msa0554360:CDS
CTGGCGTAAATTAGTTGGAG+TGG 0.583112 4_1:+51611614 None:intergenic
ACTCCCGACCAGTGATTCAA+AGG 0.586740 4_1:-51610409 Msa0554360:CDS
TTCAAGGAGACGAAGGTGGT+GGG 0.586973 4_1:+51615897 None:intergenic
ATAATTGACACCTGAACCAA+AGG 0.587680 4_1:+51615643 None:intergenic
GGGGTTCATCATAAAACTCA+CGG 0.588710 4_1:+51613505 None:intergenic
TGATATCAACTCGTGCTGGT+GGG 0.589176 4_1:-51611466 Msa0554360:CDS
AAGGACCTACCTTGTAGTTG+TGG 0.590735 4_1:-51613246 Msa0554360:CDS
ATTTATTAAGAACTGATACA+AGG 0.591701 4_1:+51613415 None:intergenic
ACTGCTTGAGCATCAGAGAG+TGG 0.591953 4_1:-51614920 Msa0554360:CDS
AGGGCATCTTATGATGGGGA+AGG 0.594070 4_1:-51613361 Msa0554360:CDS
GGTTTGGCTTAATCAGCTCA+AGG 0.594373 4_1:+51612165 None:intergenic
GTTCCTTATCAGATATACAC+TGG 0.596636 4_1:-51613716 Msa0554360:CDS
CACCAACTAAGTCAATGTCT+GGG 0.596790 4_1:+51612084 None:intergenic
AAGACTTACAGGCTCAGGAC+AGG 0.596921 4_1:-51611379 Msa0554360:CDS
ATATATGTTGAGAAGGACAA+AGG 0.598638 4_1:-51613394 Msa0554360:CDS
TAGCATCAGAGTCGGAAACC+AGG 0.598851 4_1:-51610945 Msa0554360:CDS
TATGATGAACCCCTTAAACA+TGG 0.599772 4_1:-51613495 Msa0554360:CDS
CAGACATTGACTTAGTTGGT+GGG 0.601601 4_1:-51612082 Msa0554360:CDS
AATCGCGGGGCTGAAAAGGT+GGG 0.602653 4_1:+51615863 None:intergenic
CATTCAGTGCCTTATAAACA+AGG 0.603623 4_1:-51613265 Msa0554360:CDS
AACATTCAACTTGAGTGAGA+GGG 0.605750 4_1:+51613220 None:intergenic
GCAGCACTTTAGTCCATGAA+AGG 0.606499 4_1:-51610337 Msa0554360:CDS
GTTCTGCATCACTTAGACCC+AGG 0.609049 4_1:+51612039 None:intergenic
ACTGCCTTTGAATCACTGGT+CGG 0.609913 4_1:+51610405 None:intergenic
GATATTGAATTTGAAGACGT+CGG 0.610834 4_1:-51610886 Msa0554360:intron
AAGTTTGTTAGCATCAGAGT+CGG 0.613066 4_1:-51610953 Msa0554360:CDS
CCGTTTCTGTCCATATCGAA+AGG 0.613149 4_1:+51611355 None:intergenic
TGCGACGATATGGTCTTACT+GGG 0.616615 4_1:-51613611 Msa0554360:CDS
GTCATGTTCTGAATCTGCGA+GGG 0.618340 4_1:-51610923 Msa0554360:CDS
ATCGCGGAGAAGGGATTGTG+AGG 0.619365 4_1:+51615969 None:intergenic
ATTGGAAGCAAATGGAGTGG+AGG 0.621826 4_1:-51613781 Msa0554360:CDS
TGAGCCTGTAAGTCTTGTGA+GGG 0.622934 4_1:+51611386 None:intergenic
CCATGCCCATAGACTCTGCA+AGG 0.623496 4_1:+51610240 None:intergenic
TAACTTACATGTCATCTCCA+AGG 0.627540 4_1:+51614851 None:intergenic
GAACACTGTGATTATTGATG+AGG 0.628175 4_1:-51613694 Msa0554360:CDS
TGGACAGAAACGGCATGTTG+TGG 0.630144 4_1:-51611345 Msa0554360:CDS
TGCAAAAGGACTGTACCAGA+TGG 0.632875 4_1:-51613198 Msa0554360:CDS
CCATCAGAGGACAAAAGCAA+AGG 0.634049 4_1:+51615673 None:intergenic
AGAGGGCTACCACAACTACA+AGG 0.634818 4_1:+51613237 None:intergenic
TAACCTGTTGTAGCTTGACA+AGG 0.635593 4_1:+51613097 None:intergenic
CTAAGTGATGCAGAACATTG+TGG 0.645219 4_1:-51612032 Msa0554360:CDS
TTGGACAAATCTATCAGGAG+CGG 0.651126 4_1:+51613461 None:intergenic
AGTAAGACCATATCGTCGCA+GGG 0.652621 4_1:+51613614 None:intergenic
GGGAGAGTGAATTCTCTAAG+TGG 0.652751 4_1:-51613860 Msa0554360:CDS
TAAATTGGAAGCAAATGGAG+TGG 0.653479 4_1:-51613784 Msa0554360:CDS
ATGTTGGGAAAGGAAATCGC+GGG 0.653617 4_1:+51615849 None:intergenic
CAGGGTCTTCAAGGAGACGA+AGG 0.654234 4_1:+51615890 None:intergenic
ATGATCAAATTGAATCTGAG+AGG 0.657250 4_1:+51615711 None:intergenic
GGATTGCAAAGCATTTCAAG+GGG 0.660247 4_1:-51611115 Msa0554360:CDS
CCATAGGGCATCTTATGATG+GGG 0.660451 4_1:-51613365 Msa0554360:CDS
ATGGAAGGACAATACAATAG+GGG 0.663870 4_1:+51613121 None:intergenic
GGCTACCACAACTACAAGGT+AGG 0.664330 4_1:+51613241 None:intergenic
GGTCATGTTCTGAATCTGCG+AGG 0.667444 4_1:-51610924 Msa0554360:CDS
AACCCCTTAAACATGGTCAG+AGG 0.671680 4_1:-51613488 Msa0554360:CDS
GGTCTTCAAGGAGACGAAGG+TGG 0.677517 4_1:+51615893 None:intergenic
GGAAGTTGGAATCGAAATCG+CGG 0.684863 4_1:+51615953 None:intergenic
TGGGATCAAATATTACGACA+CGG 0.688453 4_1:+51611417 None:intergenic
TATGTTGGGAAAGGAAATCG+CGG 0.688500 4_1:+51615848 None:intergenic
TTGTACAAGAATAATAAGGG+AGG 0.688626 4_1:-51614877 Msa0554360:CDS
ATGGGCAAATTATTAATACA+GGG 0.702610 4_1:+51613901 None:intergenic
TGCCCATAGACTCTGCAAGG+AGG 0.715941 4_1:+51610243 None:intergenic
TGTTGGGAAAGGAAATCGCG+GGG 0.716055 4_1:+51615850 None:intergenic
ATGAATCACATCCATCATCG+AGG 0.748270 4_1:+51613145 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CCAAAAATTTATAATTTATA+GGG + chr4_1:51611963-51611982 None:intergenic 10.0%
!! TCCAAAAATTTATAATTTAT+AGG + chr4_1:51611964-51611983 None:intergenic 10.0%
!!! TTTTTTTTTTTTATGAGATT+TGG - chr4_1:51612035-51612054 Msa0554360:CDS 10.0%
!! AAAAAAGAAATTGTTTATTT+AGG - chr4_1:51613534-51613553 Msa0554360:CDS 10.0%
!!! CAATTTTGAAAAATATTTTT+AGG + chr4_1:51613768-51613787 None:intergenic 10.0%
!!! AAAGGAAACATTTTTTTTTT+TGG + chr4_1:51611000-51611019 None:intergenic 15.0%
!!! ATGTTTATGAATTTGTTTAA+TGG - chr4_1:51611023-51611042 Msa0554360:CDS 15.0%
!! TGTATATTCTATACATATTA+TGG + chr4_1:51611379-51611398 None:intergenic 15.0%
!!! TAATGTTTTATATAAGATAG+AGG + chr4_1:51611490-51611509 None:intergenic 15.0%
!! TCTTATATAAAACATTATGA+TGG - chr4_1:51611493-51611512 Msa0554360:intron 15.0%
!! CTTACATAATATTTACTATT+GGG - chr4_1:51611551-51611570 Msa0554360:intron 15.0%
!!! ATTTGTTAATTTAATGACAA+AGG + chr4_1:51611858-51611877 None:intergenic 15.0%
!!! CCCTATAAATTATAAATTTT+TGG - chr4_1:51611960-51611979 Msa0554360:CDS 15.0%
!! TTAATAAATATATGTTGAGA+AGG - chr4_1:51612728-51612747 Msa0554360:intron 15.0%
!! TTTAAAAACAGTAATCAAAT+AGG + chr4_1:51613495-51613514 None:intergenic 15.0%
!!! ACAATTTCTTTTTTTAAGAA+TGG + chr4_1:51613528-51613547 None:intergenic 15.0%
!!! AATTTATCTACTGTTAATTT+TGG - chr4_1:51615611-51615630 Msa0554360:intron 15.0%
!!! ATTTATCTACTGTTAATTTT+GGG - chr4_1:51615612-51615631 Msa0554360:intron 15.0%
!! AAAATAAAAGTTATGATGTT+TGG + chr4_1:51616137-51616156 None:intergenic 15.0%
!! GAGTTAATTCAAAAAAGTTT+AGG + chr4_1:51609949-51609968 None:intergenic 20.0%
!! AGAATAAAATGCAATAATTG+TGG + chr4_1:51610533-51610552 None:intergenic 20.0%
!!! ATTTTATATGAATGCAATCA+TGG - chr4_1:51610555-51610574 Msa0554360:intron 20.0%
!! GTTTATTGTTTACTTCATTA+AGG - chr4_1:51610837-51610856 Msa0554360:intron 20.0%
!!! CATTTTTTTTTTTGGAAACT+CGG + chr4_1:51610992-51611011 None:intergenic 20.0%
!! CAAATTCATAAACATGATAA+AGG + chr4_1:51611018-51611037 None:intergenic 20.0%
!!! TGATTTGTACAAGAATAATA+AGG - chr4_1:51611248-51611267 Msa0554360:CDS 20.0%
!! GATTTGTACAAGAATAATAA+GGG - chr4_1:51611249-51611268 Msa0554360:CDS 20.0%
!! AATATACAGATATATTGATG+TGG - chr4_1:51611391-51611410 Msa0554360:CDS 20.0%
!! ATATACAGATATATTGATGT+GGG - chr4_1:51611392-51611411 Msa0554360:CDS 20.0%
!! GCTTACATAATATTTACTAT+TGG - chr4_1:51611550-51611569 Msa0554360:intron 20.0%
!!! GATATGTATTTTACTCTAAT+AGG + chr4_1:51611613-51611632 None:intergenic 20.0%
!! GATAAAAAAGAAAACTTTAG+CGG + chr4_1:51611670-51611689 None:intergenic 20.0%
!! ATTTATCATATATCAAATCC+CGG + chr4_1:51612330-51612349 None:intergenic 20.0%
!! GGATTTGATATATGATAAAT+TGG - chr4_1:51612330-51612349 Msa0554360:intron 20.0%
!!! TAAGATCTTATTTTGCATTA+CGG + chr4_1:51612545-51612564 None:intergenic 20.0%
!! ATTTATTAAGAACTGATACA+AGG + chr4_1:51612717-51612736 None:intergenic 20.0%
!! TATTCAATTTAATAAGTGTG+TGG - chr4_1:51613328-51613347 Msa0554360:CDS 20.0%
!!! TTTTTTTTTTTGCAAAAGCA+AGG + chr4_1:51613596-51613615 None:intergenic 20.0%
!! AATTAAAATTAGATCAACCT+AGG - chr4_1:51613628-51613647 Msa0554360:CDS 20.0%
!! ATTAAAATTAGATCAACCTA+GGG - chr4_1:51613629-51613648 Msa0554360:CDS 20.0%
!! AAAAACTTCAAGCAATATTA+TGG + chr4_1:51614276-51614295 None:intergenic 20.0%
!! GAGAAATTTATCATAAGAAA+AGG - chr4_1:51614466-51614485 Msa0554360:intron 20.0%
!!! TAATTGAATAAGCATTTTTC+TGG - chr4_1:51614594-51614613 Msa0554360:intron 20.0%
!!! GGTAAAACAAATTGTTTTAT+TGG - chr4_1:51615457-51615476 Msa0554360:intron 20.0%
!!! CAAAACAAAAGTTGATTAAA+TGG + chr4_1:51615655-51615674 None:intergenic 20.0%
!!! AACTTTTGTTTTGTATCTTT+AGG - chr4_1:51615662-51615681 Msa0554360:CDS 20.0%
!!! AAAGGAATTTTCTGTTTTTT+AGG + chr4_1:51615836-51615855 None:intergenic 20.0%
!! AAGAAAAAGAAAAAGCTTAA+AGG - chr4_1:51615983-51616002 Msa0554360:CDS 20.0%
!!! TTACACAATTTTCTATTGTT+TGG + chr4_1:51616048-51616067 None:intergenic 20.0%
!! TAACTAATTCAATTTGTACA+AGG + chr4_1:51616099-51616118 None:intergenic 20.0%
!!! TAGTTTTACTTGTTGTTCTT+GGG + chr4_1:51610319-51610338 None:intergenic 25.0%
!! AATTTCACACACTTTATTTC+TGG + chr4_1:51610384-51610403 None:intergenic 25.0%
! TTTAATCTCAAGTTAAGTCA+TGG - chr4_1:51610595-51610614 Msa0554360:intron 25.0%
!!! ACATTATGATGGAATTTTCT+TGG - chr4_1:51611504-51611523 Msa0554360:intron 25.0%
! GTAAATATTATGTAAGCATG+AGG + chr4_1:51611547-51611566 None:intergenic 25.0%
! ATAGTAGGATACAAGAATTT+AGG - chr4_1:51611732-51611751 Msa0554360:intron 25.0%
! TTTGTGTGTATATTATTTGC+TGG - chr4_1:51611997-51612016 Msa0554360:CDS 25.0%
! AAGAAATGCTATTGTTTGAA+TGG + chr4_1:51612146-51612165 None:intergenic 25.0%
! ATGGGCAAATTATTAATACA+GGG + chr4_1:51612231-51612250 None:intergenic 25.0%
!!! AGTTTTGAATAATGGATGAT+GGG + chr4_1:51612249-51612268 None:intergenic 25.0%
! ATCATCCATTATTCAAAACT+GGG - chr4_1:51612249-51612268 Msa0554360:intron 25.0%
! TATGATAAATTGGAAGCAAA+TGG - chr4_1:51612340-51612359 Msa0554360:intron 25.0%
!! GTTTTCTCTTATTAGCAATT+TGG + chr4_1:51612690-51612709 None:intergenic 25.0%
! ATTTGCAAAAACGCATTTAT+AGG - chr4_1:51612821-51612840 Msa0554360:intron 25.0%
! AGTTTCTATCTTGTAATTGT+AGG - chr4_1:51613182-51613201 Msa0554360:CDS 25.0%
!!! ATGTTTGTTATCTGTTAAGA+TGG - chr4_1:51613280-51613299 Msa0554360:CDS 25.0%
! TTAGGACAAAGCAAAAAATA+TGG + chr4_1:51613750-51613769 None:intergenic 25.0%
!! TCATAAACAAGTTTGTTCAT+AGG + chr4_1:51613877-51613896 None:intergenic 25.0%
!!! TTTTGTTTAGCTATTCTGTA+AGG - chr4_1:51614179-51614198 Msa0554360:intron 25.0%
!!! ATCATGTTTGATACTTTTTC+TGG - chr4_1:51614224-51614243 Msa0554360:intron 25.0%
!!! TCATGTTTGATACTTTTTCT+GGG - chr4_1:51614225-51614244 Msa0554360:intron 25.0%
!!! ATGGAAAAACGATATTTTGA+AGG - chr4_1:51614902-51614921 Msa0554360:CDS 25.0%
! AAATTAATCAATTTCCATGC+AGG - chr4_1:51614993-51615012 Msa0554360:intron 25.0%
! ATTTATGAGGAAAGAAAACA+AGG + chr4_1:51615305-51615324 None:intergenic 25.0%
! TATTCAGTAAGGAAACAATT+AGG - chr4_1:51615326-51615345 Msa0554360:intron 25.0%
! AAGCTGTTATATATCTTAGA+AGG + chr4_1:51615378-51615397 None:intergenic 25.0%
!! GATATATAACAGCTTTTTAC+TGG - chr4_1:51615383-51615402 Msa0554360:intron 25.0%
!!! TTTACTGGAACATTTTTTTG+AGG - chr4_1:51615398-51615417 Msa0554360:intron 25.0%
! GGTGAATGAAAATATGAATT+TGG + chr4_1:51615489-51615508 None:intergenic 25.0%
!! AATATTCTTTTGTCATGGTA+TGG + chr4_1:51615510-51615529 None:intergenic 25.0%
! ATACCATGACAAAAGAATAT+TGG - chr4_1:51615509-51615528 Msa0554360:intron 25.0%
!! TTACCAATATTCTTTTGTCA+TGG + chr4_1:51615515-51615534 None:intergenic 25.0%
! AAATTCCTTTGATTGATGAA+AGG - chr4_1:51615846-51615865 Msa0554360:CDS 25.0%
!!! TCGTAATGTTTCGTTTTTTT+AGG - chr4_1:51616164-51616183 Msa0554360:five_prime_UTR 25.0%
TGATTGTGATTGTGATTGTT+GGG + chr4_1:51610124-51610143 None:intergenic 30.0%
!!! CTAGTTTTACTTGTTGTTCT+TGG + chr4_1:51610320-51610339 None:intergenic 30.0%
TAAAGAAGAAGAAGAAGATG+AGG - chr4_1:51610341-51610360 Msa0554360:CDS 30.0%
ATGATCAAATTGAATCTGAG+AGG + chr4_1:51610421-51610440 None:intergenic 30.0%
CAGATTCAATTTGATCATAC+TGG - chr4_1:51610423-51610442 Msa0554360:CDS 30.0%
GTGCTAACAATTTATGTGTT+GGG - chr4_1:51610881-51610900 Msa0554360:intron 30.0%
TTAAAAGACCTAATAATCCC+GGG + chr4_1:51610969-51610988 None:intergenic 30.0%
GTTAAAAGACCTAATAATCC+CGG + chr4_1:51610970-51610989 None:intergenic 30.0%
! TATATTCTGAGAACTGTTTC+AGG - chr4_1:51611164-51611183 Msa0554360:intron 30.0%
TTGTACAAGAATAATAAGGG+AGG - chr4_1:51611252-51611271 Msa0554360:CDS 30.0%
AAAATAGGGAAAACAGAAGA+GGG + chr4_1:51611332-51611351 None:intergenic 30.0%
AAAAATAGGGAAAACAGAAG+AGG + chr4_1:51611333-51611352 None:intergenic 30.0%
AGGACGATGCTAAAAAAATA+GGG + chr4_1:51611346-51611365 None:intergenic 30.0%
CATATTATGGCGTAAAAAAC+AGG + chr4_1:51611366-51611385 None:intergenic 30.0%
AAAGCAATGTGATTGAGATT+TGG + chr4_1:51611448-51611467 None:intergenic 30.0%
GTCAAAATCAATCATGAAGT+GGG + chr4_1:51611697-51611716 None:intergenic 30.0%
AGTCAAAATCAATCATGAAG+TGG + chr4_1:51611698-51611717 None:intergenic 30.0%
!! ACTTCATGATTGATTTTGAC+TGG - chr4_1:51611697-51611716 Msa0554360:intron 30.0%
!!! ATTTTGACTGGAAATGCTTT+AGG - chr4_1:51611709-51611728 Msa0554360:intron 30.0%
! AGATTTCTATTTTGCTACTC+AGG - chr4_1:51611828-51611847 Msa0554360:intron 30.0%
! TGCACATTGAAATTTGAAAC+AGG - chr4_1:51612107-51612126 Msa0554360:CDS 30.0%
! GCACATTGAAATTTGAAACA+GGG - chr4_1:51612108-51612127 Msa0554360:CDS 30.0%
! CACATTGAAATTTGAAACAG+GGG - chr4_1:51612109-51612128 Msa0554360:CDS 30.0%
GATGGGCAAATTATTAATAC+AGG + chr4_1:51612232-51612251 None:intergenic 30.0%
!!! CAGTTTTGAATAATGGATGA+TGG + chr4_1:51612250-51612269 None:intergenic 30.0%
CATCATCCATTATTCAAAAC+TGG - chr4_1:51612248-51612267 Msa0554360:intron 30.0%
ATATATGTTGAGAAGGACAA+AGG - chr4_1:51612735-51612754 Msa0554360:intron 30.0%
GACACTATATTCAAAAAGAG+AGG + chr4_1:51613082-51613101 None:intergenic 30.0%
ATTCAGATCAGTAGTTGTAA+CGG - chr4_1:51613220-51613239 Msa0554360:CDS 30.0%
TGTTAAGATGGAAGTAGATA+TGG - chr4_1:51613292-51613311 Msa0554360:CDS 30.0%
AATGAAAACAAAACAACCCT+AGG + chr4_1:51613648-51613667 None:intergenic 30.0%
! AGCAAAAAATATGGAGTGTT+GGG + chr4_1:51613741-51613760 None:intergenic 30.0%
AAGCAAAAAATATGGAGTGT+TGG + chr4_1:51613742-51613761 None:intergenic 30.0%
!! CATCTTTAACTTGTTTGTCA+GGG + chr4_1:51614000-51614019 None:intergenic 30.0%
TATTCTGTAAGGTGAATAGT+TGG - chr4_1:51614190-51614209 Msa0554360:intron 30.0%
TTCTGGGTATCTTATAAGAT+AGG - chr4_1:51614241-51614260 Msa0554360:intron 30.0%
! AAGACCATAGTTGTATCTTT+TGG - chr4_1:51614354-51614373 Msa0554360:intron 30.0%
AAGACCAAAAGATACAACTA+TGG + chr4_1:51614361-51614380 None:intergenic 30.0%
! ATAGTTGTATCTTTTGGTCT+TGG - chr4_1:51614360-51614379 Msa0554360:intron 30.0%
!! TAGTTGTATCTTTTGGTCTT+GGG - chr4_1:51614361-51614380 Msa0554360:intron 30.0%
AGTTAAACAGCAGGAAAATA+CGG + chr4_1:51614413-51614432 None:intergenic 30.0%
TTGAGATATACTTGTTTGCT+TGG + chr4_1:51614568-51614587 None:intergenic 30.0%
!! TGGTTCAATTTGTTGTTATC+AGG - chr4_1:51614614-51614633 Msa0554360:intron 30.0%
!!! AGGCTCTTGTTTCTTATTTT+AGG - chr4_1:51614634-51614653 Msa0554360:intron 30.0%
CATGAGACGAATAAAAAAGA+CGG - chr4_1:51615108-51615127 Msa0554360:intron 30.0%
ATGAGACGAATAAAAAAGAC+GGG - chr4_1:51615109-51615128 Msa0554360:intron 30.0%
ACGTCTTCAAATTCAATATC+TGG + chr4_1:51615243-51615262 None:intergenic 30.0%
GATATTGAATTTGAAGACGT+CGG - chr4_1:51615243-51615262 Msa0554360:intron 30.0%
CCTTACTGAATAGATTTATG+AGG + chr4_1:51615318-51615337 None:intergenic 30.0%
CCTCATAAATCTATTCAGTA+AGG - chr4_1:51615315-51615334 Msa0554360:intron 30.0%
!! TTAATTTTGGGAAATGACAG+CGG - chr4_1:51615624-51615643 Msa0554360:intron 30.0%
!!! TGTTTTTTAGGTACACATTC+TGG + chr4_1:51615824-51615843 None:intergenic 30.0%
!!! CTCGTTGATTTTGCATTTAG+CGG - chr4_1:51609966-51609985 Msa0554360:three_prime_UTR 35.0%
GTGATTGTGATTGTGATTGT+TGG + chr4_1:51610125-51610144 None:intergenic 35.0%
!! TTTTCTGTTGATTGGGAAGT+TGG + chr4_1:51610193-51610212 None:intergenic 35.0%
!! TACTTGTTGTTCTTGGGTTT+GGG + chr4_1:51610313-51610332 None:intergenic 35.0%
!! TTACTTGTTGTTCTTGGGTT+TGG + chr4_1:51610314-51610333 None:intergenic 35.0%
ATAATTGACACCTGAACCAA+AGG + chr4_1:51610489-51610508 None:intergenic 35.0%
TGGGAAATCTACTCAATACT+AGG + chr4_1:51610754-51610773 None:intergenic 35.0%
GTATTGAGTAGATTTCCCAA+TGG - chr4_1:51610755-51610774 Msa0554360:intron 35.0%
! GTTTACTTCATTAAGGCATC+AGG - chr4_1:51610844-51610863 Msa0554360:intron 35.0%
ACACATAAATTGTTAGCACC+TGG + chr4_1:51610880-51610899 None:intergenic 35.0%
GGTGCTAACAATTTATGTGT+TGG - chr4_1:51610880-51610899 Msa0554360:intron 35.0%
TTAATCCCACCATGTATTAG+AGG + chr4_1:51610944-51610963 None:intergenic 35.0%
TAAAAGACCTAATAATCCCG+GGG + chr4_1:51610968-51610987 None:intergenic 35.0%
AGTCTACAGTTTATAGATGC+AGG + chr4_1:51611192-51611211 None:intergenic 35.0%
TAACTTACATGTCATCTCCA+AGG + chr4_1:51611281-51611300 None:intergenic 35.0%
AAATAGGGAAAACAGAAGAG+GGG + chr4_1:51611331-51611350 None:intergenic 35.0%
CAGGACGATGCTAAAAAAAT+AGG + chr4_1:51611347-51611366 None:intergenic 35.0%
TGTAAGCATGAGGTAGATAA+AGG + chr4_1:51611537-51611556 None:intergenic 35.0%
! GAAAGTGCAATATTTCAGAG+AGG + chr4_1:51611637-51611656 None:intergenic 35.0%
!! TGGAAATGCTTTAGGATAGT+AGG - chr4_1:51611717-51611736 Msa0554360:intron 35.0%
! TTCTATTTTGCTACTCAGGT+CGG - chr4_1:51611832-51611851 Msa0554360:intron 35.0%
! GAAGACATACACTGTGATTT+TGG + chr4_1:51611920-51611939 None:intergenic 35.0%
! GGTTCTTTTTATCTCAACTC+TGG - chr4_1:51612056-51612075 Msa0554360:CDS 35.0%
GTCTCCTTCTTTACCAAATA+TGG + chr4_1:51612173-51612192 None:intergenic 35.0%
!!! ACTCTCCCAGTTTTGAATAA+TGG + chr4_1:51612257-51612276 None:intergenic 35.0%
TAAATTGGAAGCAAATGGAG+TGG - chr4_1:51612345-51612364 Msa0554360:intron 35.0%
!! TTACCAGTTTTGACACTTAC+AGG - chr4_1:51612377-51612396 Msa0554360:intron 35.0%
AATCCTGTAAGTGTCAAAAC+TGG + chr4_1:51612383-51612402 None:intergenic 35.0%
TTTGACACTTACAGGATTCA+CGG - chr4_1:51612385-51612404 Msa0554360:intron 35.0%
GTTCCTTATCAGATATACAC+TGG - chr4_1:51612413-51612432 Msa0554360:intron 35.0%
GTTCCAGTGTATATCTGATA+AGG + chr4_1:51612419-51612438 None:intergenic 35.0%
GAACACTGTGATTATTGATG+AGG - chr4_1:51612435-51612454 Msa0554360:intron 35.0%
TGATTATTGATGAGGCTCAT+CGG - chr4_1:51612443-51612462 Msa0554360:intron 35.0%
! ATCTTTGATTTAGTTGCACC+TGG - chr4_1:51612577-51612596 Msa0554360:intron 35.0%
TATGATGAACCCCTTAAACA+TGG - chr4_1:51612634-51612653 Msa0554360:intron 35.0%
GCAATTTGGACAAATCTATC+AGG + chr4_1:51612676-51612695 None:intergenic 35.0%
!! TTTATAAGGCACTGAATGTC+AGG + chr4_1:51612862-51612881 None:intergenic 35.0%
CATTCAGTGCCTTATAAACA+AGG - chr4_1:51612864-51612883 Msa0554360:intron 35.0%
! AAGGTAGGTCCTTGTTTATA+AGG + chr4_1:51612876-51612895 None:intergenic 35.0%
AACATTCAACTTGAGTGAGA+GGG + chr4_1:51612912-51612931 None:intergenic 35.0%
!! CTCAAGTTGAATGTTGCAAA+AGG - chr4_1:51612917-51612936 Msa0554360:intron 35.0%
AGGTTATCTTTGTGAAGGTA+AGG + chr4_1:51612967-51612986 None:intergenic 35.0%
ATGGAAGGACAATACAATAG+GGG + chr4_1:51613011-51613030 None:intergenic 35.0%
CATGGAAGGACAATACAATA+GGG + chr4_1:51613012-51613031 None:intergenic 35.0%
!! AGCTAATTTGTTCATAGCAC+TGG - chr4_1:51613121-51613140 Msa0554360:CDS 35.0%
TTCAGATCAGTAGTTGTAAC+GGG - chr4_1:51613221-51613240 Msa0554360:CDS 35.0%
AGTAGATATGGACAAGGATA+TGG - chr4_1:51613304-51613323 Msa0554360:CDS 35.0%
!! AAAAAATATGGAGTGTTGGG+TGG + chr4_1:51613738-51613757 None:intergenic 35.0%
AAGACAATCAAATCAAGCCA+TGG - chr4_1:51613802-51613821 Msa0554360:CDS 35.0%
AGACAATCAAATCAAGCCAT+GGG - chr4_1:51613803-51613822 Msa0554360:CDS 35.0%
!! GCATCTTTAACTTGTTTGTC+AGG + chr4_1:51614001-51614020 None:intergenic 35.0%
TTGAAAAGCTGTTGTTGTCA+TGG - chr4_1:51614134-51614153 Msa0554360:intron 35.0%
! TTGTTGTCATGGTTTTCACA+TGG - chr4_1:51614145-51614164 Msa0554360:intron 35.0%
AGCAATAGATAAGAGGAACA+AGG + chr4_1:51614332-51614351 None:intergenic 35.0%
GTCTTGAAGCAATAGATAAG+AGG + chr4_1:51614339-51614358 None:intergenic 35.0%
!!! AGTTGTATCTTTTGGTCTTG+GGG - chr4_1:51614362-51614381 Msa0554360:intron 35.0%
! TAACTTGAGCTACTCTTTTC+AGG - chr4_1:51614428-51614447 Msa0554360:intron 35.0%
TGGGATCAAATATTACGACA+CGG + chr4_1:51614715-51614734 None:intergenic 35.0%
TCGTAATATTTGATCCCAAC+TGG - chr4_1:51614717-51614736 Msa0554360:intron 35.0%
! AGAACTAGTTTATTCTCGTC+AGG - chr4_1:51614838-51614857 Msa0554360:intron 35.0%
ACATCAAAATACACAGGTTG+TGG + chr4_1:51614938-51614957 None:intergenic 35.0%
! AGGATTGCAAAGCATTTCAA+GGG - chr4_1:51615013-51615032 Msa0554360:intron 35.0%
!! AAGTTTGTTAGCATCAGAGT+CGG - chr4_1:51615176-51615195 Msa0554360:intron 35.0%
!!! ACATTTTTTTGAGGCGATCA+TGG - chr4_1:51615407-51615426 Msa0554360:intron 35.0%
CTACATATGCACAAAAATGC+TGG - chr4_1:51615436-51615455 Msa0554360:intron 35.0%
GAATCTTTGCTTTGTAACTG+TGG - chr4_1:51615560-51615579 Msa0554360:intron 35.0%
TAACTGTGGCCATTGAAATT+AGG - chr4_1:51615574-51615593 Msa0554360:intron 35.0%
AACTGTGGCCATTGAAATTA+GGG - chr4_1:51615575-51615594 Msa0554360:intron 35.0%
GCTTTACTCCCTAATTTCAA+TGG + chr4_1:51615586-51615605 None:intergenic 35.0%
!! ATTCTGGTTTCTTCCTTTCA+TGG + chr4_1:51615808-51615827 None:intergenic 35.0%
CTCTTCCTTTCATCAATCAA+AGG + chr4_1:51615854-51615873 None:intergenic 35.0%
! TTTTTCTCTCTCTACTGAAG+TGG + chr4_1:51615948-51615967 None:intergenic 35.0%
TATGTTGGGAAAGGAAATCG+CGG + chr4_1:51610284-51610303 None:intergenic 40.0%
GGTTTGGGAATGGTTATGTT+GGG + chr4_1:51610298-51610317 None:intergenic 40.0%
AGAAGAAGAAGAAGATGAGG+AGG - chr4_1:51610344-51610363 Msa0554360:CDS 40.0%
GACAAAAGCAAAGGCTCAAA+AGG + chr4_1:51610450-51610469 None:intergenic 40.0%
TCTCAAGTTAAGTCATGGAC+TGG - chr4_1:51610600-51610619 Msa0554360:intron 40.0%
ACGTGTCTATTGTCCAATAC+GGG + chr4_1:51610710-51610729 None:intergenic 40.0%
GACGTGTCTATTGTCCAATA+CGG + chr4_1:51610711-51610730 None:intergenic 40.0%
TTGAGTAGATTTCCCAATGG+CGG - chr4_1:51610758-51610777 Msa0554360:intron 40.0%
GATTAATCCCCGGGATTATT+AGG - chr4_1:51610958-51610977 Msa0554360:CDS 40.0%
!! AATAATAAGGGAGGCATCCT+TGG - chr4_1:51611261-51611280 Msa0554360:CDS 40.0%
! GAAATTTGAAACAGGGGTCT+TGG - chr4_1:51612115-51612134 Msa0554360:CDS 40.0%
GCATTTCTTGCTGCCATATT+TGG - chr4_1:51612157-51612176 Msa0554360:CDS 40.0%
GCTGCCATATTTGGTAAAGA+AGG - chr4_1:51612166-51612185 Msa0554360:CDS 40.0%
! TTCAGCGTTGCCATTTATCA+TGG - chr4_1:51612298-51612317 Msa0554360:intron 40.0%
CCATTTATCATGGTGCAAAC+CGG - chr4_1:51612308-51612327 Msa0554360:intron 40.0%
CATTTATCATGGTGCAAACC+GGG - chr4_1:51612309-51612328 Msa0554360:intron 40.0%
ATTAAAACCCTGCGACGATA+TGG - chr4_1:51612508-51612527 Msa0554360:intron 40.0%
GGGGTTCATCATAAAACTCA+CGG + chr4_1:51612627-51612646 None:intergenic 40.0%
TGACCTCTGACCATGTTTAA+GGG + chr4_1:51612647-51612666 None:intergenic 40.0%
TTGACCTCTGACCATGTTTA+AGG + chr4_1:51612648-51612667 None:intergenic 40.0%
TTGGACAAATCTATCAGGAG+CGG + chr4_1:51612671-51612690 None:intergenic 40.0%
! ACCATAGGGCATCTTATGAT+GGG - chr4_1:51612763-51612782 Msa0554360:intron 40.0%
CAACATTCAACTTGAGTGAG+AGG + chr4_1:51612913-51612932 None:intergenic 40.0%
CATCGAGGTTATCTTTGTGA+AGG + chr4_1:51612972-51612991 None:intergenic 40.0%
CACAAAGATAACCTCGATGA+TGG - chr4_1:51612973-51612992 Msa0554360:intron 40.0%
ATGAATCACATCCATCATCG+AGG + chr4_1:51612987-51613006 None:intergenic 40.0%
GCATGGAAGGACAATACAAT+AGG + chr4_1:51613013-51613032 None:intergenic 40.0%
TAACCTGTTGTAGCTTGACA+AGG + chr4_1:51613035-51613054 None:intergenic 40.0%
! TAGCACTGGACATCTATTGT+AGG - chr4_1:51613135-51613154 Msa0554360:CDS 40.0%
TCAGATCAGTAGTTGTAACG+GGG - chr4_1:51613222-51613241 Msa0554360:CDS 40.0%
AGGCGTGAATTATCTGAAGA+AGG - chr4_1:51613256-51613275 Msa0554360:CDS 40.0%
GATGGAAGTAGATATGGACA+AGG - chr4_1:51613298-51613317 Msa0554360:CDS 40.0%
TTAGTAACCACACTGATGGA+GGG - chr4_1:51613428-51613447 Msa0554360:CDS 40.0%
GATGCGTAGGAACAAAAGTA+AGG + chr4_1:51613679-51613698 None:intergenic 40.0%
GACAATCAAATCAAGCCATG+GGG - chr4_1:51613804-51613823 Msa0554360:CDS 40.0%
TGTTTGTCAGGGTCATCTTT+GGG + chr4_1:51613989-51614008 None:intergenic 40.0%
TTGTTTGTCAGGGTCATCTT+TGG + chr4_1:51613990-51614009 None:intergenic 40.0%
CACCAACTAAGTCAATGTCT+GGG + chr4_1:51614048-51614067 None:intergenic 40.0%
!! CAGACATTGACTTAGTTGGT+GGG - chr4_1:51614047-51614066 Msa0554360:intron 40.0%
ATGCAGAATGAGAGTTTCCT+GGG - chr4_1:51614073-51614092 Msa0554360:intron 40.0%
CTAAGTGATGCAGAACATTG+TGG - chr4_1:51614097-51614116 Msa0554360:intron 40.0%
AGTAGCTCAAGTTAAACAGC+AGG + chr4_1:51614422-51614441 None:intergenic 40.0%
TACTGCTTCTCAAGACTTGA+TGG - chr4_1:51614490-51614509 Msa0554360:intron 40.0%
ACTGCTTCTCAAGACTTGAT+GGG - chr4_1:51614491-51614510 Msa0554360:intron 40.0%
AGAGACTGGCGTAAATTAGT+TGG + chr4_1:51614523-51614542 None:intergenic 40.0%
AACTAATTTACGCCAGTCTC+TGG - chr4_1:51614522-51614541 Msa0554360:intron 40.0%
TGAAATCATCAACCAGAGAC+TGG + chr4_1:51614537-51614556 None:intergenic 40.0%
CCTTTCGATATGGACAGAAA+CGG - chr4_1:51614774-51614793 Msa0554360:intron 40.0%
TCTCAAACATTGCTGTCTCT+GGG - chr4_1:51614876-51614895 Msa0554360:CDS 40.0%
!!! ACGATATTTTGAAGGTGTCC+AGG - chr4_1:51614910-51614929 Msa0554360:CDS 40.0%
GCTGCAACATCAAAATACAC+AGG + chr4_1:51614944-51614963 None:intergenic 40.0%
AAATGCTTTGCAATCCTGCA+TGG + chr4_1:51615010-51615029 None:intergenic 40.0%
! CAGGATTGCAAAGCATTTCA+AGG - chr4_1:51615012-51615031 Msa0554360:intron 40.0%
! GGATTGCAAAGCATTTCAAG+GGG - chr4_1:51615014-51615033 Msa0554360:intron 40.0%
GATAACTGCCTTTGAATCAC+TGG + chr4_1:51615731-51615750 None:intergenic 40.0%
GAGAGCTTGCATTTAGCAAA+TGG - chr4_1:51615912-51615931 Msa0554360:CDS 40.0%
AGGTTAAGCAGTGATTCTCA+TGG - chr4_1:51616003-51616022 Msa0554360:CDS 40.0%
ATGGATGACAAGACAAATGC+AGG - chr4_1:51616022-51616041 Msa0554360:CDS 40.0%
AGAAGGGATTGTGAGGAAGA+TGG + chr4_1:51610156-51610175 None:intergenic 45.0%
GGAAGTTGGAATCGAAATCG+CGG + chr4_1:51610179-51610198 None:intergenic 45.0%
!! TGGGGGGTTTTCTGTTGATT+GGG + chr4_1:51610200-51610219 None:intergenic 45.0%
! TTGGGGGGTTTTCTGTTGAT+TGG + chr4_1:51610201-51610220 None:intergenic 45.0%
ATGTTGGGAAAGGAAATCGC+GGG + chr4_1:51610283-51610302 None:intergenic 45.0%
GGGAATGGTTATGTTGGGAA+AGG + chr4_1:51610293-51610312 None:intergenic 45.0%
GGGTTTGGGAATGGTTATGT+TGG + chr4_1:51610299-51610318 None:intergenic 45.0%
GTTGTTCTTGGGTTTGGGAA+TGG + chr4_1:51610308-51610327 None:intergenic 45.0%
AGAAGATGAGGAGGAAGAAG+AGG - chr4_1:51610353-51610372 Msa0554360:CDS 45.0%
CCATCAGAGGACAAAAGCAA+AGG + chr4_1:51610459-51610478 None:intergenic 45.0%
!! CCTTTGCTTTTGTCCTCTGA+TGG - chr4_1:51610456-51610475 Msa0554360:intron 45.0%
CAAAGGAAGTTCACCATCAG+AGG + chr4_1:51610472-51610491 None:intergenic 45.0%
! CTCTGATGGTGAACTTCCTT+TGG - chr4_1:51610470-51610489 Msa0554360:intron 45.0%
! TGGTGAACTTCCTTTGGTTC+AGG - chr4_1:51610476-51610495 Msa0554360:intron 45.0%
!!! AACCACGTGTGTGTTGGTTT+TGG - chr4_1:51610668-51610687 Msa0554360:intron 45.0%
CGTGTCTATTGTCCAATACG+GGG + chr4_1:51610709-51610728 None:intergenic 45.0%
TGAGTAGATTTCCCAATGGC+GGG - chr4_1:51610759-51610778 Msa0554360:intron 45.0%
AGTCAGAGCAAAGCTCTGTA+TGG + chr4_1:51610912-51610931 None:intergenic 45.0%
AGCTTTGCTCTGACTTCAGT+TGG - chr4_1:51610917-51610936 Msa0554360:CDS 45.0%
GCTTTGCTCTGACTTCAGTT+GGG - chr4_1:51610918-51610937 Msa0554360:CDS 45.0%
TCAGTTGGGCCTCTAATACA+TGG - chr4_1:51610932-51610951 Msa0554360:CDS 45.0%
TTGGGCCTCTAATACATGGT+GGG - chr4_1:51610936-51610955 Msa0554360:CDS 45.0%
! TACATGGTGGGATTAATCCC+CGG - chr4_1:51610948-51610967 Msa0554360:CDS 45.0%
AAGAGGGGAAAAGTGAGAAG+AGG + chr4_1:51611316-51611335 None:intergenic 45.0%
CTACCATGCTTTGCATGACA+GGG + chr4_1:51611588-51611607 None:intergenic 45.0%
TCTACCATGCTTTGCATGAC+AGG + chr4_1:51611589-51611608 None:intergenic 45.0%
GGGAGAGTGAATTCTCTAAG+TGG - chr4_1:51612269-51612288 Msa0554360:intron 45.0%
! CCGGTTTGCACCATGATAAA+TGG + chr4_1:51612311-51612330 None:intergenic 45.0%
ATTGGAAGCAAATGGAGTGG+AGG - chr4_1:51612348-51612367 Msa0554360:intron 45.0%
AGTAAGACCATATCGTCGCA+GGG + chr4_1:51612518-51612537 None:intergenic 45.0%
! TGCGACGATATGGTCTTACT+GGG - chr4_1:51612518-51612537 Msa0554360:intron 45.0%
AACCCCTTAAACATGGTCAG+AGG - chr4_1:51612641-51612660 Msa0554360:intron 45.0%
GACCTCTGACCATGTTTAAG+GGG + chr4_1:51612646-51612665 None:intergenic 45.0%
AGGACAAAGGAAGAGACCAT+AGG - chr4_1:51612748-51612767 Msa0554360:intron 45.0%
GGACAAAGGAAGAGACCATA+GGG - chr4_1:51612749-51612768 Msa0554360:intron 45.0%
! GACCATAGGGCATCTTATGA+TGG - chr4_1:51612762-51612781 Msa0554360:intron 45.0%
! CCATAGGGCATCTTATGATG+GGG - chr4_1:51612764-51612783 Msa0554360:intron 45.0%
AAGGACCTACCTTGTAGTTG+TGG - chr4_1:51612883-51612902 Msa0554360:intron 45.0%
TGCAAAAGGACTGTACCAGA+TGG - chr4_1:51612931-51612950 Msa0554360:intron 45.0%
CTGTACCAGATGGAGCTATT+TGG - chr4_1:51612941-51612960 Msa0554360:intron 45.0%
TAAGGCCAAATAGCTCCATC+TGG + chr4_1:51612949-51612968 None:intergenic 45.0%
TGTTGTAGCTTGACAAGGCA+TGG + chr4_1:51613030-51613049 None:intergenic 45.0%
ATGCCTTGTCAAGCTACAAC+AGG - chr4_1:51613029-51613048 Msa0554360:intron 45.0%
GCTCTTAGTAACCACACTGA+TGG - chr4_1:51613424-51613443 Msa0554360:CDS 45.0%
CTTAGTAACCACACTGATGG+AGG - chr4_1:51613427-51613446 Msa0554360:CDS 45.0%
CATAGCGTGTGCAAACTGAA+AGG + chr4_1:51613840-51613859 None:intergenic 45.0%
TTTGCACACGCTATGTTCAG+TGG - chr4_1:51613845-51613864 Msa0554360:CDS 45.0%
!! GTGAAGAAGCATCTTGAGCA+TGG + chr4_1:51613900-51613919 None:intergenic 45.0%
GCTCAAGGTGATTGCTTATC+TGG + chr4_1:51613952-51613971 None:intergenic 45.0%
! GGTTTGGCTTAATCAGCTCA+AGG + chr4_1:51613967-51613986 None:intergenic 45.0%
GTTTGTCAGGGTCATCTTTG+GGG + chr4_1:51613988-51614007 None:intergenic 45.0%
!! AAGTTTGCTGCTGCTGTCTA+TGG - chr4_1:51614022-51614041 Msa0554360:intron 45.0%
CCACCAACTAAGTCAATGTC+TGG + chr4_1:51614049-51614068 None:intergenic 45.0%
!! CCAGACATTGACTTAGTTGG+TGG - chr4_1:51614046-51614065 Msa0554360:intron 45.0%
CATGCAGAATGAGAGTTTCC+TGG - chr4_1:51614072-51614091 Msa0554360:intron 45.0%
!! AGCTACTCTTTTCAGGATGC+TGG - chr4_1:51614435-51614454 Msa0554360:intron 45.0%
TTTCAGGATGCTGGACATAC+TGG - chr4_1:51614444-51614463 Msa0554360:intron 45.0%
CTGGCGTAAATTAGTTGGAG+TGG + chr4_1:51614518-51614537 None:intergenic 45.0%
TTCCTGATATCAACTCGTGC+TGG - chr4_1:51614659-51614678 Msa0554360:intron 45.0%
! TGATATCAACTCGTGCTGGT+GGG - chr4_1:51614663-51614682 Msa0554360:intron 45.0%
TCTTGTGAGGGATTCCAGTT+GGG + chr4_1:51614734-51614753 None:intergenic 45.0%
GAATCCCTCACAAGACTTAC+AGG - chr4_1:51614739-51614758 Msa0554360:intron 45.0%
! TGAGCCTGTAAGTCTTGTGA+GGG + chr4_1:51614746-51614765 None:intergenic 45.0%
CCGTTTCTGTCCATATCGAA+AGG + chr4_1:51614777-51614796 None:intergenic 45.0%
CTCTCAAACATTGCTGTCTC+TGG - chr4_1:51614875-51614894 Msa0554360:CDS 45.0%
AATACACAGGTTGTGGTACC+TGG + chr4_1:51614931-51614950 None:intergenic 45.0%
! GCATTTCAAGGGGAGCTTTT+TGG - chr4_1:51615024-51615043 Msa0554360:intron 45.0%
ATGCGATTCAACGATCTCAC+TGG + chr4_1:51615091-51615110 None:intergenic 45.0%
! GTCATGTTCTGAATCTGCGA+GGG - chr4_1:51615206-51615225 Msa0554360:intron 45.0%
ACTGCCTTTGAATCACTGGT+CGG + chr4_1:51615727-51615746 None:intergenic 45.0%
!! TCATGGACTAAAGTGCTGCT+TGG + chr4_1:51615791-51615810 None:intergenic 45.0%
GCAGCACTTTAGTCCATGAA+AGG - chr4_1:51615792-51615811 Msa0554360:CDS 45.0%
CTCTGCAAGGAGGCTAAATT+GGG + chr4_1:51615879-51615898 None:intergenic 45.0%
ACTCTGCAAGGAGGCTAAAT+TGG + chr4_1:51615880-51615899 None:intergenic 45.0%
! ATTTTGCATTTAGCGGCGCG+CGG - chr4_1:51609973-51609992 Msa0554360:three_prime_UTR 50.0%
GATGTCGCTGCAAACTCTGA+AGG - chr4_1:51610074-51610093 Msa0554360:three_prime_UTR 50.0%
GGAATCGAAATCGCGGAGAA+GGG + chr4_1:51610172-51610191 None:intergenic 50.0%
TGGAATCGAAATCGCGGAGA+AGG + chr4_1:51610173-51610192 None:intergenic 50.0%
! TGGTGGGCAAGAGAGGATTT+GGG + chr4_1:51610219-51610238 None:intergenic 50.0%
TTCAAGGAGACGAAGGTGGT+GGG + chr4_1:51610235-51610254 None:intergenic 50.0%
GCTGAAAAGGTGGGTCATCA+GGG + chr4_1:51610260-51610279 None:intergenic 50.0%
TGTTGGGAAAGGAAATCGCG+GGG + chr4_1:51610282-51610301 None:intergenic 50.0%
GTCCAAAACCAACACACACG+TGG + chr4_1:51610673-51610692 None:intergenic 50.0%
CCAATACGGGGTGATCTTGT+TGG + chr4_1:51610697-51610716 None:intergenic 50.0%
CCAACAAGATCACCCCGTAT+TGG - chr4_1:51610694-51610713 Msa0554360:intron 50.0%
TGCTAGTTGAACCCGCCATT+GGG + chr4_1:51610773-51610792 None:intergenic 50.0%
GAGCAAAGCTCTGTATGGAC+TGG + chr4_1:51610907-51610926 None:intergenic 50.0%
GTTGGGCCTCTAATACATGG+TGG - chr4_1:51610935-51610954 Msa0554360:CDS 50.0%
! ACATGGTGGGATTAATCCCC+GGG - chr4_1:51610949-51610968 Msa0554360:CDS 50.0%
ACTGCTTGAGCATCAGAGAG+TGG - chr4_1:51611209-51611228 Msa0554360:intron 50.0%
CTGCTTGAGCATCAGAGAGT+GGG - chr4_1:51611210-51611229 Msa0554360:intron 50.0%
AGGGGAAAAGTGAGAAGAGG+AGG + chr4_1:51611313-51611332 None:intergenic 50.0%
CTTTGCATGACAGGGTTCTC+AGG + chr4_1:51611580-51611599 None:intergenic 50.0%
GAACCCTGTCATGCAAAGCA+TGG - chr4_1:51611582-51611601 Msa0554360:CDS 50.0%
CAGTAAGACCATATCGTCGC+AGG + chr4_1:51612519-51612538 None:intergenic 50.0%
! CTGCGACGATATGGTCTTAC+TGG - chr4_1:51612517-51612536 Msa0554360:intron 50.0%
TTAGTTGCACCTGGATCCCT+TGG - chr4_1:51612586-51612605 Msa0554360:intron 50.0%
CCCCATCATAAGATGCCCTA+TGG + chr4_1:51612767-51612786 None:intergenic 50.0%
! AGGGCATCTTATGATGGGGA+AGG - chr4_1:51612768-51612787 Msa0554360:intron 50.0%
GGCTACCACAACTACAAGGT+AGG + chr4_1:51612891-51612910 None:intergenic 50.0%
AGAGGGCTACCACAACTACA+AGG + chr4_1:51612895-51612914 None:intergenic 50.0%
GTAGCTTGACAAGGCATGGA+AGG + chr4_1:51613026-51613045 None:intergenic 50.0%
! GTAACGGGGATGAGAAAGAG+AGG - chr4_1:51613236-51613255 Msa0554360:CDS 50.0%
GACAAATCCCTCCATCAGTG+TGG + chr4_1:51613438-51613457 None:intergenic 50.0%
ACAGCTCACAAGTGATGCGT+AGG + chr4_1:51613692-51613711 None:intergenic 50.0%
GTGGCAATGGTAACAGTGGT+GGG + chr4_1:51613719-51613738 None:intergenic 50.0%
TTGGGTGGCAATGGTAACAG+TGG + chr4_1:51613723-51613742 None:intergenic 50.0%
!! TATGGAGTGTTGGGTGGCAA+TGG + chr4_1:51613732-51613751 None:intergenic 50.0%
AAAGGCAATAGTGCTCCCCA+TGG + chr4_1:51613822-51613841 None:intergenic 50.0%
!! TCAGGGTCATCTTTGGGGTT+TGG + chr4_1:51613983-51614002 None:intergenic 50.0%
!! GGCCCAGACATTGACTTAGT+TGG - chr4_1:51614043-51614062 Msa0554360:intron 50.0%
GTTCTGCATCACTTAGACCC+AGG + chr4_1:51614093-51614112 None:intergenic 50.0%
!! CACCAGCACGAGTTGATATC+AGG + chr4_1:51614664-51614683 None:intergenic 50.0%
CTGATATCAACTCGTGCTGG+TGG - chr4_1:51614662-51614681 Msa0554360:intron 50.0%
GTCTTGTGAGGGATTCCAGT+TGG + chr4_1:51614735-51614754 None:intergenic 50.0%
! CTGAGCCTGTAAGTCTTGTG+AGG + chr4_1:51614747-51614766 None:intergenic 50.0%
CTCACAAGACTTACAGGCTC+AGG - chr4_1:51614745-51614764 Msa0554360:intron 50.0%
AAGACTTACAGGCTCAGGAC+AGG - chr4_1:51614750-51614769 Msa0554360:intron 50.0%
CAGGACAGGTCCTTTCGATA+TGG - chr4_1:51614764-51614783 Msa0554360:intron 50.0%
TGGACAGAAACGGCATGTTG+TGG - chr4_1:51614784-51614803 Msa0554360:intron 50.0%
GTATTCCGTCTTCTCTCAGC+TGG - chr4_1:51614806-51614825 Msa0554360:intron 50.0%
GTGAACCAGCTGAGAGAAGA+CGG + chr4_1:51614814-51614833 None:intergenic 50.0%
! CATTGCTGTCTCTGGGAAGA+TGG - chr4_1:51614883-51614902 Msa0554360:CDS 50.0%
TAGCATCAGAGTCGGAAACC+AGG - chr4_1:51615184-51615203 Msa0554360:intron 50.0%
CGCAGATTCAGAACATGACC+TGG + chr4_1:51615205-51615224 None:intergenic 50.0%
! GGTCATGTTCTGAATCTGCG+AGG - chr4_1:51615205-51615224 Msa0554360:intron 50.0%
ACTCCCGACCAGTGATTCAA+AGG - chr4_1:51615720-51615739 Msa0554360:CDS 50.0%
CTGCCTTTGAATCACTGGTC+GGG + chr4_1:51615726-51615745 None:intergenic 50.0%
GCTTTCGCCATCGCTTGAAA+GGG + chr4_1:51615765-51615784 None:intergenic 50.0%
TAGCCTCCTTGCAGAGTCTA+TGG - chr4_1:51615883-51615902 Msa0554360:CDS 50.0%
AGCCTCCTTGCAGAGTCTAT+GGG - chr4_1:51615884-51615903 Msa0554360:CDS 50.0%
CTTGCAGAGTCTATGGGCAT+GGG - chr4_1:51615890-51615909 Msa0554360:CDS 50.0%
ATCGCGGAGAAGGGATTGTG+AGG + chr4_1:51610163-51610182 None:intergenic 55.0%
TGGGCAAGAGAGGATTTGGG+GGG + chr4_1:51610216-51610235 None:intergenic 55.0%
GTGGGCAAGAGAGGATTTGG+GGG + chr4_1:51610217-51610236 None:intergenic 55.0%
GGTGGGCAAGAGAGGATTTG+GGG + chr4_1:51610218-51610237 None:intergenic 55.0%
!! GTGGTGGGCAAGAGAGGATT+TGG + chr4_1:51610220-51610239 None:intergenic 55.0%
CTTCAAGGAGACGAAGGTGG+TGG + chr4_1:51610236-51610255 None:intergenic 55.0%
GGTCTTCAAGGAGACGAAGG+TGG + chr4_1:51610239-51610258 None:intergenic 55.0%
CAGGGTCTTCAAGGAGACGA+AGG + chr4_1:51610242-51610261 None:intergenic 55.0%
GTGGGTCATCAGGGTCTTCA+AGG + chr4_1:51610251-51610270 None:intergenic 55.0%
GGCTGAAAAGGTGGGTCATC+AGG + chr4_1:51610261-51610280 None:intergenic 55.0%
AATCGCGGGGCTGAAAAGGT+GGG + chr4_1:51610269-51610288 None:intergenic 55.0%
AAATCGCGGGGCTGAAAAGG+TGG + chr4_1:51610270-51610289 None:intergenic 55.0%
AGGAAATCGCGGGGCTGAAA+AGG + chr4_1:51610273-51610292 None:intergenic 55.0%
GAGTGCAACCACGTGTGTGT+TGG - chr4_1:51610662-51610681 Msa0554360:intron 55.0%
GTGCTAGTTGAACCCGCCAT+TGG + chr4_1:51610774-51610793 None:intergenic 55.0%
GCATCAGGTTCGAATCTGCC+AGG - chr4_1:51610859-51610878 Msa0554360:intron 55.0%
CACTCGCGTCTCGCTAAGAA+TGG + chr4_1:51612197-51612216 None:intergenic 55.0%
CATTCTTAGCGAGACGCGAG+TGG - chr4_1:51612195-51612214 Msa0554360:intron 55.0%
! GAAGTGTTCCCGCGTTCCAA+GGG + chr4_1:51612605-51612624 None:intergenic 55.0%
! GGCACTGAATGTCAGGAAGC+TGG + chr4_1:51612855-51612874 None:intergenic 55.0%
GGTGGCAATGGTAACAGTGG+TGG + chr4_1:51613720-51613739 None:intergenic 55.0%
! CGACACGGTTTGCACTGACA+AGG + chr4_1:51614700-51614719 None:intergenic 55.0%
!! ATCGCTTGAAAGGGTGCTGC+TGG + chr4_1:51615756-51615775 None:intergenic 55.0%
AGCAGCACCCTTTCAAGCGA+TGG - chr4_1:51615755-51615774 Msa0554360:CDS 55.0%
CGCTTTCGCCATCGCTTGAA+AGG + chr4_1:51615766-51615785 None:intergenic 55.0%
TGCCCATAGACTCTGCAAGG+AGG + chr4_1:51615889-51615908 None:intergenic 55.0%
CCATGCCCATAGACTCTGCA+AGG + chr4_1:51615892-51615911 None:intergenic 55.0%
CCTTGCAGAGTCTATGGGCA+TGG - chr4_1:51615889-51615908 Msa0554360:CDS 55.0%
!! ACGAAGGTGGTGGGCAAGAG+AGG + chr4_1:51610226-51610245 None:intergenic 60.0%
CACCTGGATCCCTTGGAACG+CGG - chr4_1:51612593-51612612 Msa0554360:intron 60.0%
ACCTGGATCCCTTGGAACGC+GGG - chr4_1:51612594-51612613 Msa0554360:intron 60.0%
!! GGAAGTGTTCCCGCGTTCCA+AGG + chr4_1:51612606-51612625 None:intergenic 60.0%
!! TCAACTCGTGCTGGTGGGCT+CGG - chr4_1:51614668-51614687 Msa0554360:intron 60.0%
TCCCGCGTTCCAAGGGATCC+AGG + chr4_1:51612598-51612617 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 51609944 51616207 51609944 ID=Msa0554360;Name=Msa0554360
chr4_1 mRNA 51609944 51616207 51609944 ID=Msa0554360-mRNA-1;Parent=Msa0554360;Name=Msa0554360-mRNA-1;_AED=0.02;_eAED=0.02;_QI=131|1|1|1|1|1|8|198|892
chr4_1 exon 51609944 51610467 51609944 ID=Msa0554360-mRNA-1:exon:14850;Parent=Msa0554360-mRNA-1
chr4_1 exon 51610887 51611136 51610887 ID=Msa0554360-mRNA-1:exon:14849;Parent=Msa0554360-mRNA-1
chr4_1 exon 51611220 51611495 51611220 ID=Msa0554360-mRNA-1:exon:14848;Parent=Msa0554360-mRNA-1
chr4_1 exon 51611575 51611701 51611575 ID=Msa0554360-mRNA-1:exon:14847;Parent=Msa0554360-mRNA-1
chr4_1 exon 51611951 51612198 51611951 ID=Msa0554360-mRNA-1:exon:14846;Parent=Msa0554360-mRNA-1
chr4_1 exon 51613101 51614022 51613101 ID=Msa0554360-mRNA-1:exon:14845;Parent=Msa0554360-mRNA-1
chr4_1 exon 51614859 51614965 51614859 ID=Msa0554360-mRNA-1:exon:14844;Parent=Msa0554360-mRNA-1
chr4_1 exon 51615654 51616207 51615654 ID=Msa0554360-mRNA-1:exon:14843;Parent=Msa0554360-mRNA-1
chr4_1 five_prime_UTR 51616077 51616207 51616077 ID=Msa0554360-mRNA-1:five_prime_utr;Parent=Msa0554360-mRNA-1
chr4_1 CDS 51615654 51616076 51615654 ID=Msa0554360-mRNA-1:cds;Parent=Msa0554360-mRNA-1
chr4_1 CDS 51614859 51614965 51614859 ID=Msa0554360-mRNA-1:cds;Parent=Msa0554360-mRNA-1
chr4_1 CDS 51613101 51614022 51613101 ID=Msa0554360-mRNA-1:cds;Parent=Msa0554360-mRNA-1
chr4_1 CDS 51611951 51612198 51611951 ID=Msa0554360-mRNA-1:cds;Parent=Msa0554360-mRNA-1
chr4_1 CDS 51611575 51611701 51611575 ID=Msa0554360-mRNA-1:cds;Parent=Msa0554360-mRNA-1
chr4_1 CDS 51611220 51611495 51611220 ID=Msa0554360-mRNA-1:cds;Parent=Msa0554360-mRNA-1
chr4_1 CDS 51610887 51611136 51610887 ID=Msa0554360-mRNA-1:cds;Parent=Msa0554360-mRNA-1
chr4_1 CDS 51610142 51610467 51610142 ID=Msa0554360-mRNA-1:cds;Parent=Msa0554360-mRNA-1
chr4_1 three_prime_UTR 51609944 51610141 51609944 ID=Msa0554360-mRNA-1:three_prime_utr;Parent=Msa0554360-mRNA-1
Gene Sequence

>Msa0554360

ATGTCGCTGCAAACTCTGAAGGAATTAACACTGAGACACTGCTCAACCCAACAATCACAATCACAATCACAATCACAACCATCTTCCTCACAATCCCTTCTCCGCGATTTCGATTCCAACTTCCCAATCAACAGAAAACCCCCCAAATCCTCTCTTGCCCACCACCTTCGTCTCCTTGAAGACCCTGATGACCCACCTTTTCAGCCCCGCGATTTCCTTTCCCAACATAACCATTCCCAAACCCAAGAACAACAAGTAAAACTAGATAAAGAAGAAGAAGAAGATGAGGAGGAAGAAGAGGAAGAGCCAGAAATAAAGTGTGTGAAATTTAGTTCTGTTACATCCTCTCAGATTCAATTTGATCATACTGGACCTTTTGAGCCTTTGCTTTTGTCCTCTGATGGTGAACTTCCTTTGGTTCAGGTTCCTGCATCTATAAACTGTAGACTGCTTGAGCATCAGAGAGTGGGAGTGAAGTTTCTGTATGATTTGTACAAGAATAATAAGGGAGGCATCCTTGGAGATGACATGGGTCTTGGAAAGACCATTCAAACAATAGCATTTCTTGCTGCCATATTTGGTAAAGAAGGAGACTCCATTCTTAGCGAGACGCGAGTGGAGAAAAGAGACCCTGTATTAATAATTTGCCCATCATCCATTATTCAAAACTGGGAGAGTGAATTCTCTAAGTGGTCTAACTTCAGCGTTGCCATTTATCATGGTGCAAACCGGGATTTGATATATGATAAATTGGAAGCAAATGGAGTGGAGGTACTTATTACCAGTTTTGACACTTACAGGATTCACGGCAGCAGTTCCTTATCAGATATACACTGGAACACTGTGATTATTGATGAGGCTCATCGGCTTAAGAATGAGAAATCAAAACTCTATAAAGCATGTTTAGAAATTAAAACCCTGCGACGATATGGTCTTACTGGGACCGTAATGCAAAATAAGATCTTAGAATTGTTCAATATCTTTGATTTAGTTGCACCTGGATCCCTTGGAACGCGGGAACACTTCCGTGAGTTTTATGATGAACCCCTTAAACATGGTCAGAGGTCAACCGCTCCTGATAGATTTGTCCAAATTGCTAATAAGAGAAAACAACACCTTGTATCAGTTCTTAATAAATATATGTTGAGAAGGACAAAGGAAGAGACCATAGGGCATCTTATGATGGGGAAGGAAGATAACATTGTTTTTTGTGCAATGAGTGATTTGCAAAAACGCATTTATAGGAGAATGATCCAGCTTCCTGACATTCAGTGCCTTATAAACAAGGACCTACCTTGTAGTTGTGGTAGCCCTCTCACTCAAGTTGAATGTTGCAAAAGGACTGTACCAGATGGAGCTATTTGGCCTTACCTTCACAAAGATAACCTCGATGATGGATGTGATTCATGCCCCTATTGTATTGTCCTTCCATGCCTTGTCAAGCTACAACAGATAAGCAATCACCTTGAGCTGATTAAGCCAAACCCCAAAGATGACCCTGACAAACAAGTTAAAGATGCAAAGTTTGCTGCTGCTGTCTATGGCCCAGACATTGACTTAGTTGGTGGGAGCATGCAGAATGAGAGTTTCCTGGGTCTAAGTGATGCAGAACATTGTGGCAAAATGCGAGCACTTGAAAAGCTGTTGTTGTCATGGTTTTCACATGGCGACAAAGTTCTTTTGTTTAGCTATTCTGTAAGGATGCTGGACATACTGGAGAAATTTATCATAAGAAAAGGCTACTGCTTCTCAAGACTTGATGGGTCCACTCCAACTAATTTACGCCAGTCTCTGGTTGATGATTTCAACTCTAGTCCAAGCAAACAAGTGTTCCTGATATCAACTCGTGCTGGTGGGCTCGGATTGAACCTTGTCAGTGCAAACCGTGTCGTAATATTTGATCCCAACTGGAATCCCTCACAAGACTTACAGGCTCAGGACAGGTCCTTTCGATATGGACAGAAACGGCATGTTGTGGTATTCCGTCTTCTCTCAGCTGGTTCACTTGAAGAACTAGTTTATTCTCGTCAGGTGTACAAGCAGCAGCTCTCAAACATTGCTGTCTCTGGGAAGATGGAAAAACGATATTTTGAAGGTGTCCAGGATTGCAAAGCATTTCAAGGGGAGCTTTTTGGAATTTGCAATTTATTTCGAGATTTATCTGATAAACTATTTACCAGTGAGATCGTTGAATCGCATGAGACGAATAAAAAAGACGGGCTTAAAACAGAACAACAGAAAAAAATAAATATTTCAGAAGAAACAAGTTTGTTAGCATCAGAGTCGGAAACCAGGTCATGTTCTGAATCTGCGAGGGCTGCAAGTAAACCAGATATTGAATTTGAAGACGTCGGCATTGTCTACGCTCATCGCAATGAAGACATTGTCAACTCCCGACCAGTGATTCAAAGGCAGTTATCTACCAGCAGCACCCTTTCAAGCGATGGCGAAAGCGAGCCAAGCAGCACTTTAGTCCATGAAAGGAAGAAACCAGAATGTGTACCTAAAAAACAGAAAATTCCTTTGATTGATGAAAGGAAGAGAGCCCAATTTAGCCTCCTTGCAGAGTCTATGGGCATGGGAGAGCTTGCATTTAGCAAATGGTTACTATCAGCCACTTCAGTAGAGAGAGAAAAAGTGCTTATAGACTACAAGAAAAAGAAAAAGCTTAAAGGTTAA
Protein sequence

>Msa0554360

MSLQTLKELTLRHCSTQQSQSQSQSQPSSSQSLLRDFDSNFPINRKPPKSSLAHHLRLLEDPDDPPFQPRDFLSQHNHSQTQEQQVKLDKEEEEDEEEEEEEPEIKCVKFSSVTSSQIQFDHTGPFEPLLLSSDGELPLVQVPASINCRLLEHQRVGVKFLYDLYKNNKGGILGDDMGLGKTIQTIAFLAAIFGKEGDSILSETRVEKRDPVLIICPSSIIQNWESEFSKWSNFSVAIYHGANRDLIYDKLEANGVEVLITSFDTYRIHGSSSLSDIHWNTVIIDEAHRLKNEKSKLYKACLEIKTLRRYGLTGTVMQNKILELFNIFDLVAPGSLGTREHFREFYDEPLKHGQRSTAPDRFVQIANKRKQHLVSVLNKYMLRRTKEETIGHLMMGKEDNIVFCAMSDLQKRIYRRMIQLPDIQCLINKDLPCSCGSPLTQVECCKRTVPDGAIWPYLHKDNLDDGCDSCPYCIVLPCLVKLQQISNHLELIKPNPKDDPDKQVKDAKFAAAVYGPDIDLVGGSMQNESFLGLSDAEHCGKMRALEKLLLSWFSHGDKVLLFSYSVRMLDILEKFIIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPSQDLQAQDRSFRYGQKRHVVVFRLLSAGSLEELVYSRQVYKQQLSNIAVSGKMEKRYFEGVQDCKAFQGELFGICNLFRDLSDKLFTSEIVESHETNKKDGLKTEQQKKINISEETSLLASESETRSCSESARAASKPDIEFEDVGIVYAHRNEDIVNSRPVIQRQLSTSSTLSSDGESEPSSTLVHERKKPECVPKKQKIPLIDERKRAQFSLLAESMGMGELAFSKWLLSATSVEREKVLIDYKKKKKLKG*