AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0648120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0648120 MtrunA17_Chr4g0040301 97.203 715 19 1 176 890 18 731 0.0 1435
Msa0648120 MtrunA17_Chr1g0183681 28.757 692 343 16 138 778 381 973 7.48e-88 304
Msa0648120 MtrunA17_Chr5g0393461 30.991 555 313 11 148 684 184 686 1.30e-70 251
Msa0648120 MtrunA17_Chr8g0384531 29.498 617 346 17 106 695 343 897 3.65e-69 249
Msa0648120 MtrunA17_Chr5g0403921 29.338 559 304 15 140 686 176 655 1.22e-63 229
Msa0648120 MtrunA17_Chr1g0163011 29.777 628 336 20 105 692 161 723 7.07e-57 209
Msa0648120 MtrunA17_Chr4g0052341 27.141 619 327 20 148 745 745 1260 8.68e-52 198
Msa0648120 MtrunA17_Chr7g0255821 24.543 656 389 22 136 707 189 822 1.06e-36 149
Msa0648120 MtrunA17_Chr1g0175191 41.520 171 99 1 537 706 1061 1231 5.98e-36 147
Msa0648120 MtrunA17_Chr1g0175191 30.612 294 179 7 138 425 511 785 3.30e-35 145
Msa0648120 MtrunA17_Chr1g0190381 30.411 365 214 9 344 686 4 350 1.58e-33 136
Msa0648120 MtrunA17_Chr3g0095091 43.558 163 86 2 537 693 886 1048 7.62e-33 137
Msa0648120 MtrunA17_Chr3g0095091 26.950 282 170 8 147 417 570 826 6.97e-24 108
Msa0648120 MtrunA17_Chr5g0442141 31.212 330 189 9 537 842 932 1247 1.90e-32 136
Msa0648120 MtrunA17_Chr5g0442141 28.070 285 169 10 144 417 613 872 1.98e-25 114
Msa0648120 MtrunA17_Chr4g0066651 29.286 280 172 7 147 415 988 1252 2.23e-32 136
Msa0648120 MtrunA17_Chr4g0066651 39.869 153 91 1 537 688 1307 1459 5.69e-29 125
Msa0648120 MtrunA17_Chr5g0394201 37.786 262 133 8 537 792 671 908 2.65e-32 135
Msa0648120 MtrunA17_Chr5g0394201 29.245 318 196 11 151 462 366 660 1.16e-31 133
Msa0648120 MtrunA17_Chr8g0348721 31.985 272 165 7 148 412 987 1245 8.20e-32 134
Msa0648120 MtrunA17_Chr8g0348721 43.651 126 70 1 537 661 1312 1437 4.48e-23 106
Msa0648120 MtrunA17_Chr4g0066741 43.709 151 84 1 537 686 488 638 1.27e-31 133
Msa0648120 MtrunA17_Chr4g0066741 31.142 289 171 7 133 417 173 437 1.29e-30 130
Msa0648120 MtrunA17_Chr4g0017211 32.000 275 168 6 148 414 1450 1713 2.25e-31 133
Msa0648120 MtrunA17_Chr4g0017211 43.796 137 74 1 556 689 1830 1966 3.26e-25 113
Msa0648120 MtrunA17_Chr2g0286291 31.579 285 167 5 137 417 180 440 8.50e-31 130
Msa0648120 MtrunA17_Chr2g0286291 45.033 151 82 1 537 686 491 641 6.69e-30 127
Msa0648120 MtrunA17_Chr1g0205891 40.196 204 95 5 528 722 668 853 1.55e-30 130
Msa0648120 MtrunA17_Chr1g0205891 32.234 273 165 9 148 415 376 633 3.62e-30 129
Msa0648120 MtrunA17_Chr7g0257101 37.912 182 109 1 511 688 1161 1342 2.11e-29 126
Msa0648120 MtrunA17_Chr7g0257101 26.829 287 181 9 138 413 568 836 1.46e-24 110
Msa0648120 MtrunA17_Chr7g0248031 32.353 272 165 6 148 412 994 1253 3.15e-29 126
Msa0648120 MtrunA17_Chr7g0248031 44.444 126 69 1 537 661 1320 1445 3.33e-23 107
Msa0648120 MtrunA17_Chr3g0137091 39.080 174 98 3 514 686 594 760 5.06e-28 122
Msa0648120 MtrunA17_Chr3g0137091 30.928 291 149 8 151 416 292 555 9.90e-27 118
Msa0648120 MtrunA17_Chr7g0231521 37.423 163 89 2 538 688 286 447 2.90e-24 109
Msa0648120 MtrunA17_Chr7g0231521 32.075 212 118 6 144 340 35 235 2.29e-19 93.6
Msa0648120 MtrunA17_Chr7g0232121 37.423 163 89 2 538 688 365 526 5.46e-24 108
Msa0648120 MtrunA17_Chr7g0232121 31.229 301 171 11 144 424 35 319 8.26e-24 108
Msa0648120 MtrunA17_Chr1g0168031 37.594 133 83 0 555 687 1004 1136 3.79e-21 99.8
Msa0648120 MtrunA17_Chr1g0168031 28.629 248 129 10 167 385 533 761 5.47e-21 99.4
Msa0648120 MtrunA17_Chr2g0296421 31.579 228 131 6 500 711 801 1019 3.56e-20 96.7
Msa0648120 MtrunA17_Chr2g0296421 27.363 201 115 7 151 331 514 703 4.58e-11 67.0
Msa0648120 MtrunA17_Chr1g0212331 38.095 126 78 0 556 681 887 1012 1.21e-19 94.7
Msa0648120 MtrunA17_Chr1g0190391 29.707 239 119 9 138 341 572 796 1.69e-19 94.0
Msa0648120 MtrunA17_Chr2g0320751 34.667 150 94 1 538 687 854 999 3.88e-19 93.2
Msa0648120 MtrunA17_Chr2g0320751 25.000 304 162 8 167 417 397 687 3.85e-17 86.7
Msa0648120 MtrunA17_Chr2g0281601 37.692 130 81 0 552 681 1146 1275 6.05e-19 92.8
Msa0648120 MtrunA17_Chr4g0069451 31.111 135 93 0 538 672 470 604 1.04e-18 91.3
Msa0648120 MtrunA17_Chr4g0069451 23.824 319 190 11 111 406 132 420 8.33e-13 72.4
Msa0648120 MtrunA17_Chr7g0233021 36.478 159 90 4 552 703 1048 1202 1.07e-17 88.6
Msa0648120 MtrunA17_Chr8g0352361 34.132 167 94 5 552 711 713 870 3.88e-17 86.7
Msa0648120 MtrunA17_Chr8g0352361 26.961 204 118 7 151 334 364 556 2.45e-12 71.2
Msa0648120 MtrunA17_Chr7g0225791 36.879 141 83 2 555 689 1103 1243 7.88e-17 85.9
Msa0648120 MtrunA17_Chr7g0233001 36.170 141 84 2 555 689 338 478 8.09e-17 84.7
Msa0648120 MtrunA17_Chr2g0320781 36.090 133 79 2 555 681 110 242 9.68e-17 80.9
Msa0648120 MtrunA17_Chr4g0047081 36.879 141 83 2 555 689 1053 1193 9.94e-17 85.5
Msa0648120 MtrunA17_Chr4g0024921 32.353 136 92 0 556 691 784 919 1.45e-16 84.7
Msa0648120 MtrunA17_Chr7g0232971 36.806 144 80 4 555 689 1114 1255 1.47e-16 85.1
Msa0648120 MtrunA17_Chr7g0232991 41.121 107 62 1 584 689 511 617 1.27e-15 81.3
Msa0648120 MtrunA17_Chr3g0114161 31.737 167 101 4 547 707 1058 1217 2.27e-15 81.3
Msa0648120 MtrunA17_Chr3g0086111 33.333 123 82 0 547 669 543 665 9.96e-15 79.0
Msa0648120 MtrunA17_Chr3g0086111 26.736 288 164 15 123 391 161 420 6.10e-11 66.6
Msa0648120 MtrunA17_Chr1g0191141 30.539 167 103 4 547 707 913 1072 3.82e-14 77.0
Msa0648120 MtrunA17_Chr5g0437621 32.374 139 88 2 555 687 1122 1260 5.37e-14 76.6
Msa0648120 MtrunA17_Chr7g0224051 30.539 167 103 4 547 707 927 1086 1.34e-13 75.5
Msa0648120 MtrunA17_Chr7g0233031 39.796 98 58 1 593 689 1105 1202 1.82e-13 75.1
Msa0648120 MtrunA17_Chr5g0428401 29.012 162 100 4 539 688 1476 1634 7.43e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0648120 AT1G03750.1 63.818 901 268 12 3 887 4 862 0.0 1124
Msa0648120 AT2G18760.4 29.051 685 340 14 138 781 375 954 1.85e-89 309
Msa0648120 AT2G18760.1 29.051 685 340 14 138 781 375 954 1.85e-89 309
Msa0648120 AT2G18760.2 29.051 685 340 14 138 781 375 954 1.85e-89 309
Msa0648120 AT2G18760.7 29.051 685 340 14 138 781 375 954 1.85e-89 309
Msa0648120 AT2G18760.5 29.051 685 340 14 138 781 375 954 1.85e-89 309
Msa0648120 AT2G18760.6 29.051 685 340 14 138 781 375 954 1.85e-89 309
Msa0648120 AT2G18760.3 29.051 685 340 14 138 781 434 1013 1.85e-89 310
Msa0648120 AT3G19210.3 32.767 589 311 18 124 684 151 682 2.00e-77 268
Msa0648120 AT3G19210.1 32.767 589 311 18 124 684 151 682 1.76e-76 268
Msa0648120 AT3G19210.2 32.428 589 311 18 124 684 151 680 7.25e-74 261
Msa0648120 AT5G63950.1 28.843 579 331 14 140 695 369 889 3.75e-70 252
Msa0648120 AT5G63950.2 28.496 565 334 13 140 695 369 872 1.45e-66 242
Msa0648120 AT5G66750.1 30.769 559 296 15 141 687 195 674 3.87e-62 225
Msa0648120 AT3G54280.1 30.729 576 315 16 144 689 1447 1968 2.51e-60 224
Msa0648120 AT3G54280.2 30.729 576 315 16 144 689 1478 1999 5.39e-60 224
Msa0648120 AT2G13370.1 30.335 567 291 18 144 693 621 1100 1.51e-59 222
Msa0648120 AT2G13370.2 30.335 567 291 18 144 693 621 1100 1.51e-59 222
Msa0648120 AT2G13370.3 30.335 567 291 18 144 693 621 1100 1.51e-59 222
Msa0648120 AT4G31900.1 30.000 560 276 15 140 686 217 673 3.29e-59 220
Msa0648120 AT4G31900.3 30.000 560 276 15 140 686 217 673 3.57e-59 220
Msa0648120 AT4G31900.2 30.000 560 276 15 140 686 176 632 5.78e-59 219
Msa0648120 AT2G02090.1 28.697 568 314 15 151 681 216 729 2.07e-52 197
Msa0648120 AT5G44800.1 27.895 570 300 16 148 698 689 1166 1.39e-50 194
Msa0648120 AT3G12810.2 40.936 171 100 1 537 706 1070 1240 5.47e-36 148
Msa0648120 AT3G12810.2 30.303 297 176 8 138 425 522 796 2.97e-34 142
Msa0648120 AT3G12810.1 40.936 171 100 1 537 706 1074 1244 5.71e-36 148
Msa0648120 AT3G12810.1 30.303 297 176 8 138 425 526 800 3.15e-34 142
Msa0648120 AT1G02670.6 27.320 571 310 23 167 681 116 637 1.56e-34 141
Msa0648120 AT1G02670.3 27.320 571 310 23 167 681 143 664 1.77e-34 141
Msa0648120 AT1G02670.1 26.465 563 302 20 167 681 154 652 5.09e-34 140
Msa0648120 AT1G02670.7 26.465 563 302 20 167 681 143 641 5.23e-34 140
Msa0648120 AT5G19310.2 33.333 276 157 9 148 415 122 378 6.64e-34 140
Msa0648120 AT5G19310.2 40.642 187 92 4 537 722 430 598 9.40e-31 130
Msa0648120 AT5G19310.1 33.333 276 157 9 148 415 386 642 8.85e-34 140
Msa0648120 AT5G19310.1 40.860 186 91 4 538 722 695 862 2.03e-30 130
Msa0648120 AT3G06010.1 32.246 276 167 8 148 418 403 663 1.61e-33 140
Msa0648120 AT3G06010.1 40.642 187 92 4 537 722 712 880 2.38e-30 129
Msa0648120 AT1G08600.1 41.935 186 88 3 517 682 1067 1252 1.09e-31 134
Msa0648120 AT1G08600.1 28.716 296 180 8 138 418 709 988 2.79e-24 110
Msa0648120 AT1G08600.4 41.935 186 88 3 517 682 1088 1273 1.18e-31 134
Msa0648120 AT1G08600.4 27.564 312 184 10 138 418 709 1009 1.57e-24 111
Msa0648120 AT1G08600.3 41.935 186 88 3 517 682 1088 1273 1.18e-31 134
Msa0648120 AT1G08600.3 27.564 312 184 10 138 418 709 1009 1.57e-24 111
Msa0648120 AT1G08600.2 41.935 186 88 3 517 682 1088 1273 1.18e-31 134
Msa0648120 AT1G08600.2 27.564 312 184 10 138 418 709 1009 1.57e-24 111
Msa0648120 AT1G02670.5 27.140 549 295 23 167 659 116 615 1.29e-31 132
Msa0648120 AT1G02670.2 27.140 549 295 23 167 659 143 642 1.57e-31 132
Msa0648120 AT2G28290.3 41.830 153 88 1 537 688 1072 1224 2.29e-31 134
Msa0648120 AT2G28290.3 29.682 283 173 7 144 415 750 1017 4.36e-30 129
Msa0648120 AT2G28290.4 41.830 153 88 1 537 688 1072 1224 2.29e-31 134
Msa0648120 AT2G28290.4 29.682 283 173 7 144 415 750 1017 4.36e-30 129
Msa0648120 AT2G28290.6 41.830 153 88 1 537 688 1073 1225 2.35e-31 134
Msa0648120 AT2G28290.6 29.682 283 173 7 144 415 751 1018 4.25e-30 129
Msa0648120 AT2G28290.5 41.830 153 88 1 537 688 1073 1225 2.35e-31 134
Msa0648120 AT2G28290.5 29.682 283 173 7 144 415 751 1018 4.48e-30 129
Msa0648120 AT2G28290.1 41.830 153 88 1 537 688 1072 1224 2.37e-31 134
Msa0648120 AT2G28290.1 29.682 283 173 7 144 415 750 1017 4.52e-30 129
Msa0648120 AT2G28290.2 41.830 153 88 1 537 688 1072 1224 2.47e-31 134
Msa0648120 AT2G28290.2 29.682 283 173 7 144 415 750 1017 4.14e-30 129
Msa0648120 AT5G18620.1 31.293 294 173 6 128 417 175 443 1.54e-30 130
Msa0648120 AT5G18620.1 42.763 152 86 1 536 686 493 644 9.99e-29 124
Msa0648120 AT5G18620.2 31.293 294 173 6 128 417 175 443 1.60e-30 130
Msa0648120 AT5G18620.2 42.763 152 86 1 536 686 493 644 1.09e-28 124
Msa0648120 AT2G46020.5 30.389 283 178 7 137 412 969 1239 5.69e-30 129
Msa0648120 AT2G46020.5 41.270 126 73 1 537 661 1306 1431 4.35e-21 100
Msa0648120 AT2G46020.1 30.389 283 178 7 137 412 969 1239 5.69e-30 129
Msa0648120 AT2G46020.1 41.270 126 73 1 537 661 1306 1431 4.35e-21 100
Msa0648120 AT2G46020.6 30.389 283 178 7 137 412 969 1239 5.69e-30 129
Msa0648120 AT2G46020.6 41.270 126 73 1 537 661 1306 1431 4.35e-21 100
Msa0648120 AT2G46020.2 30.986 284 176 7 137 412 969 1240 9.11e-30 128
Msa0648120 AT2G46020.2 41.270 126 73 1 537 661 1307 1432 3.96e-21 100
Msa0648120 AT2G46020.3 30.986 284 176 7 137 412 969 1240 9.11e-30 128
Msa0648120 AT2G46020.3 41.270 126 73 1 537 661 1307 1432 3.96e-21 100
Msa0648120 AT2G46020.4 30.986 284 176 7 137 412 969 1240 9.11e-30 128
Msa0648120 AT2G46020.4 41.270 126 73 1 537 661 1307 1432 3.96e-21 100
Msa0648120 AT3G06400.2 43.421 152 85 1 536 686 488 639 1.12e-29 127
Msa0648120 AT3G06400.2 28.440 327 181 6 95 417 161 438 1.47e-25 114
Msa0648120 AT3G06400.1 43.421 152 85 1 536 686 488 639 1.14e-29 127
Msa0648120 AT3G06400.1 28.440 327 181 6 95 417 161 438 1.42e-25 114
Msa0648120 AT3G06400.3 43.421 152 85 1 536 686 488 639 1.24e-29 127
Msa0648120 AT3G06400.3 28.440 327 181 6 95 417 161 438 1.69e-25 114
Msa0648120 AT2G25170.1 36.321 212 120 5 525 735 584 781 1.54e-29 127
Msa0648120 AT2G25170.1 28.610 374 187 12 117 460 261 584 6.42e-26 115
Msa0648120 AT2G25170.4 36.321 212 120 5 525 735 584 781 1.54e-29 127
Msa0648120 AT2G25170.4 28.610 374 187 12 117 460 261 584 6.42e-26 115
Msa0648120 AT2G25170.3 36.321 212 120 5 525 735 610 807 1.77e-29 127
Msa0648120 AT2G25170.3 28.610 374 187 12 117 460 287 610 5.70e-26 115
Msa0648120 AT2G25170.2 36.321 212 120 5 525 735 601 798 1.86e-29 127
Msa0648120 AT2G25170.2 28.610 374 187 12 117 460 278 601 5.93e-26 115
Msa0648120 AT3G57300.1 39.474 152 92 0 537 688 1205 1356 6.82e-28 122
Msa0648120 AT3G57300.1 25.000 408 261 13 18 413 470 844 1.03e-25 115
Msa0648120 AT3G57300.4 39.474 152 92 0 537 688 1205 1356 6.82e-28 122
Msa0648120 AT3G57300.4 25.000 408 261 13 18 413 470 844 1.03e-25 115
Msa0648120 AT3G57300.2 39.474 152 92 0 537 688 1238 1389 8.18e-28 122
Msa0648120 AT3G57300.2 23.864 440 259 14 18 413 470 877 1.54e-22 105
Msa0648120 AT2G44980.1 40.000 165 98 1 534 697 364 528 4.40e-27 119
Msa0648120 AT2G44980.1 31.507 292 167 10 144 421 47 319 3.72e-24 109
Msa0648120 AT2G44980.3 31.438 299 166 12 144 421 47 327 1.32e-26 117
Msa0648120 AT2G44980.3 37.143 175 99 1 534 697 372 546 6.07e-26 115
Msa0648120 AT2G44980.2 37.143 175 99 1 534 697 373 547 6.86e-26 115
Msa0648120 AT2G44980.2 31.000 300 167 13 144 421 47 328 8.09e-24 108
Msa0648120 AT3G57300.3 25.000 408 261 13 18 413 470 844 8.23e-26 115
Msa0648120 AT3G16600.1 27.622 286 144 10 141 385 46 309 1.93e-23 106
Msa0648120 AT1G11100.5 28.269 283 144 9 148 385 399 667 1.29e-21 101
Msa0648120 AT1G11100.5 35.938 128 82 0 554 681 928 1055 4.19e-19 93.6
Msa0648120 AT1G11100.1 28.269 283 144 9 148 385 542 810 1.74e-21 101
Msa0648120 AT1G11100.1 35.938 128 82 0 554 681 1071 1198 5.39e-19 93.2
Msa0648120 AT5G43530.1 38.028 142 86 1 540 681 1115 1254 1.85e-21 101
Msa0648120 AT5G43530.1 26.298 289 165 10 167 422 681 954 3.17e-21 100
Msa0648120 AT5G22750.1 34.899 149 97 0 539 687 864 1012 1.60e-19 94.7
Msa0648120 AT5G22750.1 25.581 301 161 8 167 417 413 700 3.12e-19 94.0
Msa0648120 AT1G11100.3 35.938 128 82 0 554 681 972 1099 3.55e-19 94.0
Msa0648120 AT1G11100.2 35.938 128 82 0 554 681 1114 1241 5.43e-19 93.2
Msa0648120 AT1G11100.4 35.938 128 82 0 554 681 1115 1242 5.48e-19 93.2
Msa0648120 AT3G20010.3 38.095 126 78 0 556 681 628 753 6.91e-19 92.4
Msa0648120 AT3G20010.2 38.095 126 78 0 556 681 603 728 7.10e-19 92.4
Msa0648120 AT1G61140.3 35.938 128 82 0 554 681 965 1092 7.71e-19 92.8
Msa0648120 AT1G61140.1 35.938 128 82 0 554 681 1123 1250 7.74e-19 92.8
Msa0648120 AT3G20010.1 38.095 126 78 0 556 681 894 1019 1.60e-18 91.7
Msa0648120 AT3G20010.5 38.095 126 78 0 556 681 894 1019 1.60e-18 91.7
Msa0648120 AT3G20010.7 38.095 126 78 0 556 681 894 1019 1.60e-18 91.7
Msa0648120 AT5G05130.1 36.184 152 94 2 556 704 727 878 1.77e-18 91.3
Msa0648120 AT5G05130.1 23.549 293 165 9 167 415 279 556 4.78e-17 86.7
Msa0648120 AT1G50410.2 35.714 126 81 0 556 681 828 953 4.71e-18 90.1
Msa0648120 AT1G50410.1 35.714 126 81 0 556 681 828 953 4.71e-18 90.1
Msa0648120 AT1G50410.3 35.714 126 81 0 556 681 828 953 4.71e-18 90.1
Msa0648120 AT1G02670.4 36.066 183 92 8 167 333 143 316 1.38e-17 87.8
Msa0648120 AT1G48310.2 31.544 149 100 1 537 685 472 618 1.43e-17 88.2
Msa0648120 AT1G48310.2 26.749 243 136 9 111 331 135 357 7.07e-13 73.2
Msa0648120 AT1G48310.1 31.544 149 100 1 537 685 467 613 1.44e-17 88.2
Msa0648120 AT1G48310.1 26.749 243 136 9 111 331 130 352 7.40e-13 72.8
Msa0648120 AT1G48310.3 31.544 149 100 1 537 685 467 613 2.27e-17 87.4
Msa0648120 AT1G48310.3 26.749 243 136 9 111 331 130 352 1.69e-12 71.6
Msa0648120 AT1G05120.1 33.824 136 90 0 556 691 682 817 9.76e-17 85.9
Msa0648120 AT1G05120.2 33.824 136 90 0 556 691 725 860 1.02e-16 85.9
Msa0648120 AT1G05490.1 34.532 139 85 2 555 687 1216 1354 1.30e-16 85.5
Msa0648120 AT3G24340.1 36.806 144 85 3 555 692 944 1087 1.06e-15 82.4
Msa0648120 AT2G16390.2 39.024 123 70 2 552 669 711 833 1.62e-15 81.6
Msa0648120 AT2G16390.1 39.024 123 70 2 552 669 708 830 1.66e-15 81.6
Msa0648120 AT2G21450.3 34.437 151 94 1 539 684 530 680 1.11e-14 79.0
Msa0648120 AT2G21450.1 34.437 151 94 2 539 684 621 771 1.15e-14 79.0
Msa0648120 AT2G21450.2 34.437 151 94 2 539 684 628 778 1.18e-14 79.0
Msa0648120 AT3G42670.4 32.704 159 94 4 555 707 1075 1226 1.86e-14 78.6
Msa0648120 AT3G42670.2 32.704 159 94 4 555 707 1073 1224 1.88e-14 78.6
Msa0648120 AT3G42670.3 32.704 159 94 4 555 707 1073 1224 1.88e-14 78.6
Msa0648120 AT3G42670.1 32.704 159 94 4 555 707 1073 1224 1.88e-14 78.6
Msa0648120 AT5G20420.1 36.429 140 81 4 555 687 1079 1217 2.73e-14 78.2
Msa0648120 AT5G07810.1 35.088 114 74 0 556 669 556 669 1.52e-13 75.5
Msa0648120 AT1G48310.4 26.749 243 136 9 111 331 130 352 9.41e-13 72.0

Find 221 sgRNAs with CRISPR-Local

Find 430 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTTCACACACTTTATTTC+TGG 0.152298 4_3:+54540245 None:intergenic
GCATTTCTTGCTGCCATATT+TGG 0.166507 4_3:-54538469 Msa0648120:CDS
TTGACCTCTGACCATGTTTA+AGG 0.196528 4_3:+54537981 None:intergenic
ACTCTGCAAGGAGGCTAAAT+TGG 0.199786 4_3:+54534749 None:intergenic
GTCTCCTTCTTTACCAAATA+TGG 0.224688 4_3:+54538456 None:intergenic
GTGGTGGGCAAGAGAGGATT+TGG 0.228532 4_3:+54540409 None:intergenic
TAGCCTCCTTGCAGAGTCTA+TGG 0.243019 4_3:-54534743 Msa0648120:CDS
TACTTGTTGTTCTTGGGTTT+GGG 0.246469 4_3:+54540316 None:intergenic
CTCTCAAACATTGCTGTCTC+TGG 0.257303 4_3:-54535751 Msa0648120:CDS
GGATTTGATATATGATAAAT+TGG 0.258903 4_3:-54538296 Msa0648120:CDS
TTACTTGTTGTTCTTGGGTT+TGG 0.263234 4_3:+54540315 None:intergenic
ACGTCTTCAAATTCAATATC+TGG 0.269463 4_3:+54535386 None:intergenic
GGCTGAAAAGGTGGGTCATC+AGG 0.277598 4_3:+54540368 None:intergenic
TGTTTGTCAGGGTCATCTTT+GGG 0.277800 4_3:+54536640 None:intergenic
GCATCTTTAACTTGTTTGTC+AGG 0.288648 4_3:+54536628 None:intergenic
CATCATCCATTATTCAAAAC+TGG 0.289541 4_3:-54538378 Msa0648120:CDS
GAATCCCTCACAAGACTTAC+AGG 0.293933 4_3:-54535887 Msa0648120:CDS
CTCTGATGGTGAACTTCCTT+TGG 0.297442 4_3:-54540156 Msa0648120:CDS
CTGCGACGATATGGTCTTAC+TGG 0.298138 4_3:-54538109 Msa0648120:CDS
TTGTTTGTCAGGGTCATCTT+TGG 0.298511 4_3:+54536639 None:intergenic
AAAATAAAAGTTATGATGTT+TGG 0.304272 4_3:+54534492 None:intergenic
AAGTTTGCTGCTGCTGTCTA+TGG 0.305035 4_3:-54536604 Msa0648120:CDS
TGATTTGTACAAGAATAATA+AGG 0.311275 4_3:-54539378 Msa0648120:CDS
TCAGGGTCATCTTTGGGGTT+TGG 0.313078 4_3:+54536646 None:intergenic
CAGATTCAATTTGATCATAC+TGG 0.314349 4_3:-54540203 Msa0648120:CDS
ATTCTGGTTTCTTCCTTTCA+TGG 0.314562 4_3:+54534821 None:intergenic
ATTAAAACCCTGCGACGATA+TGG 0.325967 4_3:-54538118 Msa0648120:CDS
TGGTGAACTTCCTTTGGTTC+AGG 0.327763 4_3:-54540150 Msa0648120:intron
GTGATTGTGATTGTGATTGT+TGG 0.335701 4_3:+54540498 None:intergenic
CGCTTTCGCCATCGCTTGAA+AGG 0.346282 4_3:+54534863 None:intergenic
CCGGTTTGCACCATGATAAA+TGG 0.352916 4_3:+54538318 None:intergenic
TTTCAGGATGCTGGACATAC+TGG 0.356832 4_3:-54536182 Msa0648120:intron
CTGTACCAGATGGAGCTATT+TGG 0.361393 4_3:-54537685 Msa0648120:CDS
TGGTGGGCAAGAGAGGATTT+GGG 0.361662 4_3:+54540410 None:intergenic
GAAATTTGAAACAGGGGTCT+TGG 0.363455 4_3:-54538511 Msa0648120:intron
GCAATTTGGACAAATCTATC+AGG 0.366294 4_3:+54537953 None:intergenic
AAGGTAGGTCCTTGTTTATA+AGG 0.369061 4_3:+54537753 None:intergenic
TTGAGATATACTTGTTTGCT+TGG 0.370262 4_3:+54536061 None:intergenic
GGTGGGCAAGAGAGGATTTG+GGG 0.378252 4_3:+54540411 None:intergenic
TGATTGTGATTGTGATTGTT+GGG 0.379779 4_3:+54540499 None:intergenic
AATAATAAGGGAGGCATCCT+TGG 0.383571 4_3:-54539365 Msa0648120:CDS
TACTGCTTCTCAAGACTTGA+TGG 0.385087 4_3:-54536136 Msa0648120:CDS
CCATTTATCATGGTGCAAAC+CGG 0.391880 4_3:-54538318 Msa0648120:CDS
CCACCAACTAAGTCAATGTC+TGG 0.395022 4_3:+54536580 None:intergenic
CACCAGCACGAGTTGATATC+AGG 0.397103 4_3:+54535965 None:intergenic
AAGAAATGCTATTGTTTGAA+TGG 0.401109 4_3:+54538483 None:intergenic
GCATGGAAGGACAATACAAT+AGG 0.408321 4_3:+54537616 None:intergenic
CAGGACAGGTCCTTTCGATA+TGG 0.410442 4_3:-54535862 Msa0648120:CDS
TCAACTCGTGCTGGTGGGCT+CGG 0.416911 4_3:-54535958 Msa0648120:CDS
TGACCTCTGACCATGTTTAA+GGG 0.421710 4_3:+54537982 None:intergenic
CATTGCTGTCTCTGGGAAGA+TGG 0.424081 4_3:-54535743 Msa0648120:CDS
TCGTAATATTTGATCCCAAC+TGG 0.424506 4_3:-54535909 Msa0648120:CDS
AGAACTAGTTTATTCTCGTC+AGG 0.425773 4_3:-54535788 Msa0648120:CDS
CATGCAGAATGAGAGTTTCC+TGG 0.427298 4_3:-54536554 Msa0648120:CDS
TTTATAAGGCACTGAATGTC+AGG 0.429149 4_3:+54537767 None:intergenic
TATGATAAATTGGAAGCAAA+TGG 0.429781 4_3:-54538286 Msa0648120:CDS
AACTAATTTACGCCAGTCTC+TGG 0.429787 4_3:-54536104 Msa0648120:CDS
TTAGTTGCACCTGGATCCCT+TGG 0.431876 4_3:-54538040 Msa0648120:CDS
AGGAAATCGCGGGGCTGAAA+AGG 0.432686 4_3:+54540356 None:intergenic
CTCTGCAAGGAGGCTAAATT+GGG 0.434237 4_3:+54534750 None:intergenic
AATCCTGTAAGTGTCAAAAC+TGG 0.440969 4_3:+54538246 None:intergenic
TTCAGCGTTGCCATTTATCA+TGG 0.444926 4_3:-54538328 Msa0648120:CDS
GGGTTTGGGAATGGTTATGT+TGG 0.445378 4_3:+54540330 None:intergenic
GATGGGCAAATTATTAATAC+AGG 0.447610 4_3:+54538397 None:intergenic
GTATTCCGTCTTCTCTCAGC+TGG 0.449657 4_3:-54535820 Msa0648120:CDS
GACAAAAGCAAAGGCTCAAA+AGG 0.449714 4_3:+54540179 None:intergenic
GTGGGTCATCAGGGTCTTCA+AGG 0.451133 4_3:+54540378 None:intergenic
CACTCGCGTCTCGCTAAGAA+TGG 0.451862 4_3:+54538432 None:intergenic
CAGGATTGCAAAGCATTTCA+AGG 0.452568 4_3:-54535614 Msa0648120:CDS
GGCCCAGACATTGACTTAGT+TGG 0.454701 4_3:-54536583 Msa0648120:CDS
GACCATAGGGCATCTTATGA+TGG 0.456154 4_3:-54537864 Msa0648120:CDS
GTTCCAGTGTATATCTGATA+AGG 0.456164 4_3:+54538210 None:intergenic
GAGAAATTTATCATAAGAAA+AGG 0.456353 4_3:-54536160 Msa0648120:CDS
CATGGAAGGACAATACAATA+GGG 0.459013 4_3:+54537617 None:intergenic
CTCAAGTTGAATGTTGCAAA+AGG 0.463260 4_3:-54537709 Msa0648120:CDS
GTTGTTCTTGGGTTTGGGAA+TGG 0.464124 4_3:+54540321 None:intergenic
GCTTTCGCCATCGCTTGAAA+GGG 0.464407 4_3:+54534864 None:intergenic
GAGAGCTTGCATTTAGCAAA+TGG 0.467611 4_3:-54534714 Msa0648120:CDS
CCTTGCAGAGTCTATGGGCA+TGG 0.468152 4_3:-54534737 Msa0648120:CDS
TGGAATCGAAATCGCGGAGA+AGG 0.472990 4_3:+54540456 None:intergenic
CATCTTTAACTTGTTTGTCA+GGG 0.474207 4_3:+54536629 None:intergenic
ATCTTTGATTTAGTTGCACC+TGG 0.474759 4_3:-54538049 Msa0648120:CDS
ATGCCTTGTCAAGCTACAAC+AGG 0.474905 4_3:-54537597 Msa0648120:intron
AGAAGATGAGGAGGAAGAAG+AGG 0.475233 4_3:-54540273 Msa0648120:CDS
ATCGCTTGAAAGGGTGCTGC+TGG 0.477053 4_3:+54534873 None:intergenic
TCTTGTGAGGGATTCCAGTT+GGG 0.478018 4_3:+54535895 None:intergenic
CTTCAAGGAGACGAAGGTGG+TGG 0.480319 4_3:+54540393 None:intergenic
TCCCGCGTTCCAAGGGATCC+AGG 0.481425 4_3:+54538031 None:intergenic
GCTGCCATATTTGGTAAAGA+AGG 0.482240 4_3:-54538460 Msa0648120:CDS
GTGGGCAAGAGAGGATTTGG+GGG 0.483893 4_3:+54540412 None:intergenic
GGTTTGGGAATGGTTATGTT+GGG 0.485999 4_3:+54540331 None:intergenic
GGCACTGAATGTCAGGAAGC+TGG 0.490234 4_3:+54537774 None:intergenic
GATAACTGCCTTTGAATCAC+TGG 0.490666 4_3:+54534898 None:intergenic
CATTTATCATGGTGCAAACC+GGG 0.495575 4_3:-54538317 Msa0648120:CDS
CAGTAAGACCATATCGTCGC+AGG 0.505047 4_3:+54538110 None:intergenic
CTCTTCCTTTCATCAATCAA+AGG 0.505713 4_3:+54534775 None:intergenic
AGAAGGGATTGTGAGGAAGA+TGG 0.508201 4_3:+54540473 None:intergenic
AGGTTATCTTTGTGAAGGTA+AGG 0.510107 4_3:+54537662 None:intergenic
TTTGACACTTACAGGATTCA+CGG 0.511765 4_3:-54538241 Msa0648120:CDS
CTGATATCAACTCGTGCTGG+TGG 0.512174 4_3:-54535964 Msa0648120:CDS
CCAGACATTGACTTAGTTGG+TGG 0.513306 4_3:-54536580 Msa0648120:CDS
AGTCTACAGTTTATAGATGC+AGG 0.513326 4_3:+54539437 None:intergenic
GGGAATGGTTATGTTGGGAA+AGG 0.513965 4_3:+54540336 None:intergenic
GTTTGTCAGGGTCATCTTTG+GGG 0.517850 4_3:+54536641 None:intergenic
TGGGCAAGAGAGGATTTGGG+GGG 0.518058 4_3:+54540413 None:intergenic
AGCCTCCTTGCAGAGTCTAT+GGG 0.519253 4_3:-54534742 Msa0648120:CDS
ACGAAGGTGGTGGGCAAGAG+AGG 0.519445 4_3:+54540403 None:intergenic
ATTTATCATATATCAAATCC+CGG 0.519671 4_3:+54538299 None:intergenic
GGAAGTGTTCCCGCGTTCCA+AGG 0.520430 4_3:+54538023 None:intergenic
ACCTGGATCCCTTGGAACGC+GGG 0.521957 4_3:-54538032 Msa0648120:CDS
AGAGACTGGCGTAAATTAGT+TGG 0.523151 4_3:+54536106 None:intergenic
CTGCCTTTGAATCACTGGTC+GGG 0.523383 4_3:+54534903 None:intergenic
AAATCGCGGGGCTGAAAAGG+TGG 0.523444 4_3:+54540359 None:intergenic
CACAAAGATAACCTCGATGA+TGG 0.523793 4_3:-54537653 Msa0648120:CDS
ACCATAGGGCATCTTATGAT+GGG 0.525258 4_3:-54537863 Msa0648120:CDS
TCATGGACTAAAGTGCTGCT+TGG 0.525522 4_3:+54534838 None:intergenic
GTCTTGTGAGGGATTCCAGT+TGG 0.526276 4_3:+54535894 None:intergenic
CCCCATCATAAGATGCCCTA+TGG 0.526454 4_3:+54537862 None:intergenic
TTGAAAAGCTGTTGTTGTCA+TGG 0.528651 4_3:-54536492 Msa0648120:CDS
GGAATCGAAATCGCGGAGAA+GGG 0.530035 4_3:+54540457 None:intergenic
ATGGATGACAAGACAAATGC+AGG 0.531654 4_3:-54534604 Msa0648120:three_prime_UTR
TAAGGCCAAATAGCTCCATC+TGG 0.531866 4_3:+54537680 None:intergenic
CGCAGATTCAGAACATGACC+TGG 0.533240 4_3:+54535424 None:intergenic
TGAAATCATCAACCAGAGAC+TGG 0.535016 4_3:+54536092 None:intergenic
GACCTCTGACCATGTTTAAG+GGG 0.537101 4_3:+54537983 None:intergenic
AGGACAAAGGAAGAGACCAT+AGG 0.540752 4_3:-54537878 Msa0648120:CDS
TCTCAAACATTGCTGTCTCT+GGG 0.544151 4_3:-54535750 Msa0648120:CDS
CAACATTCAACTTGAGTGAG+AGG 0.544717 4_3:+54537716 None:intergenic
TTAATAAATATATGTTGAGA+AGG 0.545802 4_3:-54537898 Msa0648120:CDS
AGCAGCACCCTTTCAAGCGA+TGG 0.545842 4_3:-54534871 Msa0648120:CDS
TGTTGTAGCTTGACAAGGCA+TGG 0.545935 4_3:+54537599 None:intergenic
TTCCTGATATCAACTCGTGC+TGG 0.550502 4_3:-54535967 Msa0648120:CDS
TAACTAATTCAATTTGTACA+AGG 0.551528 4_3:+54534530 None:intergenic
AGGTTAAGCAGTGATTCTCA+TGG 0.552094 4_3:-54534623 Msa0648120:exon
GGACAAAGGAAGAGACCATA+GGG 0.552411 4_3:-54537877 Msa0648120:CDS
CTCACAAGACTTACAGGCTC+AGG 0.553116 4_3:-54535881 Msa0648120:CDS
ATGCAGAATGAGAGTTTCCT+GGG 0.554920 4_3:-54536553 Msa0648120:CDS
GAAGTGTTCCCGCGTTCCAA+GGG 0.555939 4_3:+54538024 None:intergenic
TGATTATTGATGAGGCTCAT+CGG 0.558125 4_3:-54538183 Msa0648120:CDS
ATGCGATTCAACGATCTCAC+TGG 0.558770 4_3:+54535538 None:intergenic
GATTTGTACAAGAATAATAA+GGG 0.558836 4_3:-54539377 Msa0648120:CDS
ACTGCTTCTCAAGACTTGAT+GGG 0.560583 4_3:-54536135 Msa0648120:CDS
CTGAGCCTGTAAGTCTTGTG+AGG 0.564920 4_3:+54535882 None:intergenic
GTGAACCAGCTGAGAGAAGA+CGG 0.565741 4_3:+54535815 None:intergenic
CTTGCAGAGTCTATGGGCAT+GGG 0.568370 4_3:-54534736 Msa0648120:CDS
AGGATTGCAAAGCATTTCAA+GGG 0.569360 4_3:-54535613 Msa0648120:CDS
CAAAGGAAGTTCACCATCAG+AGG 0.572213 4_3:+54540157 None:intergenic
CACCTGGATCCCTTGGAACG+CGG 0.573970 4_3:-54538033 Msa0648120:CDS
GCTGAAAAGGTGGGTCATCA+GGG 0.574385 4_3:+54540369 None:intergenic
CCTTTCGATATGGACAGAAA+CGG 0.575975 4_3:-54535852 Msa0648120:CDS
CGACACGGTTTGCACTGACA+AGG 0.579908 4_3:+54535929 None:intergenic
AAATTCCTTTGATTGATGAA+AGG 0.579913 4_3:-54534780 Msa0648120:CDS
CATCGAGGTTATCTTTGTGA+AGG 0.579921 4_3:+54537657 None:intergenic
ATCATCCATTATTCAAAACT+GGG 0.580457 4_3:-54538377 Msa0648120:CDS
GATGTCGCTGCAAACTCTGA+AGG 0.580618 4_3:-54540546 Msa0648120:CDS
CTGCTTGAGCATCAGAGAGT+GGG 0.580634 4_3:-54539416 Msa0648120:CDS
GTAGCTTGACAAGGCATGGA+AGG 0.581555 4_3:+54537603 None:intergenic
CATTCTTAGCGAGACGCGAG+TGG 0.581774 4_3:-54538431 Msa0648120:CDS
CTGGCGTAAATTAGTTGGAG+TGG 0.583112 4_3:+54536111 None:intergenic
ACTCCCGACCAGTGATTCAA+AGG 0.586740 4_3:-54534906 Msa0648120:CDS
TTCAAGGAGACGAAGGTGGT+GGG 0.586973 4_3:+54540394 None:intergenic
ATAATTGACACCTGAACCAA+AGG 0.587680 4_3:+54540140 None:intergenic
GGGGTTCATCATAAAACTCA+CGG 0.588710 4_3:+54538002 None:intergenic
TGATATCAACTCGTGCTGGT+GGG 0.589176 4_3:-54535963 Msa0648120:CDS
AAGGACCTACCTTGTAGTTG+TGG 0.590735 4_3:-54537743 Msa0648120:CDS
ATTTATTAAGAACTGATACA+AGG 0.591701 4_3:+54537912 None:intergenic
ACTGCTTGAGCATCAGAGAG+TGG 0.591953 4_3:-54539417 Msa0648120:CDS
AGGGCATCTTATGATGGGGA+AGG 0.594070 4_3:-54537858 Msa0648120:CDS
GGTTTGGCTTAATCAGCTCA+AGG 0.594373 4_3:+54536662 None:intergenic
GTTCCTTATCAGATATACAC+TGG 0.596636 4_3:-54538213 Msa0648120:CDS
CACCAACTAAGTCAATGTCT+GGG 0.596790 4_3:+54536581 None:intergenic
AAGACTTACAGGCTCAGGAC+AGG 0.596921 4_3:-54535876 Msa0648120:CDS
ATATATGTTGAGAAGGACAA+AGG 0.598638 4_3:-54537891 Msa0648120:CDS
TAGCATCAGAGTCGGAAACC+AGG 0.598851 4_3:-54535442 Msa0648120:CDS
TATGATGAACCCCTTAAACA+TGG 0.599772 4_3:-54537992 Msa0648120:CDS
CAGACATTGACTTAGTTGGT+GGG 0.601601 4_3:-54536579 Msa0648120:CDS
AATCGCGGGGCTGAAAAGGT+GGG 0.602653 4_3:+54540360 None:intergenic
CATTCAGTGCCTTATAAACA+AGG 0.603623 4_3:-54537762 Msa0648120:CDS
AACATTCAACTTGAGTGAGA+GGG 0.605750 4_3:+54537717 None:intergenic
GCAGCACTTTAGTCCATGAA+AGG 0.606499 4_3:-54534834 Msa0648120:CDS
GTTCTGCATCACTTAGACCC+AGG 0.609049 4_3:+54536536 None:intergenic
ACTGCCTTTGAATCACTGGT+CGG 0.609913 4_3:+54534902 None:intergenic
GATATTGAATTTGAAGACGT+CGG 0.610834 4_3:-54535383 Msa0648120:intron
AAGTTTGTTAGCATCAGAGT+CGG 0.613066 4_3:-54535450 Msa0648120:CDS
CCGTTTCTGTCCATATCGAA+AGG 0.613149 4_3:+54535852 None:intergenic
TGCGACGATATGGTCTTACT+GGG 0.616615 4_3:-54538108 Msa0648120:CDS
GTCATGTTCTGAATCTGCGA+GGG 0.618340 4_3:-54535420 Msa0648120:CDS
ATCGCGGAGAAGGGATTGTG+AGG 0.619365 4_3:+54540466 None:intergenic
ATTGGAAGCAAATGGAGTGG+AGG 0.621826 4_3:-54538278 Msa0648120:CDS
TGAGCCTGTAAGTCTTGTGA+GGG 0.622934 4_3:+54535883 None:intergenic
CCATGCCCATAGACTCTGCA+AGG 0.623496 4_3:+54534737 None:intergenic
TAACTTACATGTCATCTCCA+AGG 0.627540 4_3:+54539348 None:intergenic
GAACACTGTGATTATTGATG+AGG 0.628175 4_3:-54538191 Msa0648120:CDS
TGGACAGAAACGGCATGTTG+TGG 0.630144 4_3:-54535842 Msa0648120:CDS
TGCAAAAGGACTGTACCAGA+TGG 0.632875 4_3:-54537695 Msa0648120:CDS
CCATCAGAGGACAAAAGCAA+AGG 0.634049 4_3:+54540170 None:intergenic
AGAGGGCTACCACAACTACA+AGG 0.634818 4_3:+54537734 None:intergenic
TAACCTGTTGTAGCTTGACA+AGG 0.635593 4_3:+54537594 None:intergenic
CTAAGTGATGCAGAACATTG+TGG 0.645219 4_3:-54536529 Msa0648120:CDS
TTGGACAAATCTATCAGGAG+CGG 0.651126 4_3:+54537958 None:intergenic
AGTAAGACCATATCGTCGCA+GGG 0.652621 4_3:+54538111 None:intergenic
GGGAGAGTGAATTCTCTAAG+TGG 0.652751 4_3:-54538357 Msa0648120:CDS
TAAATTGGAAGCAAATGGAG+TGG 0.653479 4_3:-54538281 Msa0648120:CDS
ATGTTGGGAAAGGAAATCGC+GGG 0.653617 4_3:+54540346 None:intergenic
CAGGGTCTTCAAGGAGACGA+AGG 0.654234 4_3:+54540387 None:intergenic
ATGATCAAATTGAATCTGAG+AGG 0.657250 4_3:+54540208 None:intergenic
GGATTGCAAAGCATTTCAAG+GGG 0.660247 4_3:-54535612 Msa0648120:CDS
CCATAGGGCATCTTATGATG+GGG 0.660451 4_3:-54537862 Msa0648120:CDS
ATGGAAGGACAATACAATAG+GGG 0.663870 4_3:+54537618 None:intergenic
GGCTACCACAACTACAAGGT+AGG 0.664330 4_3:+54537738 None:intergenic
GGTCATGTTCTGAATCTGCG+AGG 0.667444 4_3:-54535421 Msa0648120:CDS
AACCCCTTAAACATGGTCAG+AGG 0.671680 4_3:-54537985 Msa0648120:CDS
GGTCTTCAAGGAGACGAAGG+TGG 0.677517 4_3:+54540390 None:intergenic
GGAAGTTGGAATCGAAATCG+CGG 0.684863 4_3:+54540450 None:intergenic
TGGGATCAAATATTACGACA+CGG 0.688453 4_3:+54535914 None:intergenic
TATGTTGGGAAAGGAAATCG+CGG 0.688500 4_3:+54540345 None:intergenic
TTGTACAAGAATAATAAGGG+AGG 0.688626 4_3:-54539374 Msa0648120:CDS
ATGGGCAAATTATTAATACA+GGG 0.702610 4_3:+54538398 None:intergenic
TGCCCATAGACTCTGCAAGG+AGG 0.715941 4_3:+54534740 None:intergenic
TGTTGGGAAAGGAAATCGCG+GGG 0.716055 4_3:+54540347 None:intergenic
ATGAATCACATCCATCATCG+AGG 0.748270 4_3:+54537642 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CCAAAAATTTATAATTTATA+GGG + chr4_3:54536450-54536469 None:intergenic 10.0%
!! TCCAAAAATTTATAATTTAT+AGG + chr4_3:54536451-54536470 None:intergenic 10.0%
!!! TTTTTTTTTTTTATGAGATT+TGG - chr4_3:54536522-54536541 Msa0648120:CDS 10.0%
!! AAAAAAGAAATTGTTTATTT+AGG - chr4_3:54538021-54538040 Msa0648120:CDS 10.0%
!!! CAATTTTGAAAAATATTTTT+AGG + chr4_3:54538255-54538274 None:intergenic 10.0%
!!! AAAGGAAACATTTTTTTTTT+TGG + chr4_3:54535487-54535506 None:intergenic 15.0%
!!! ATGTTTATGAATTTGTTTAA+TGG - chr4_3:54535510-54535529 Msa0648120:CDS 15.0%
!! TGTATATTCTATACATATTA+TGG + chr4_3:54535866-54535885 None:intergenic 15.0%
!!! TAATGTTTTATATAAGATAG+AGG + chr4_3:54535977-54535996 None:intergenic 15.0%
!! TCTTATATAAAACATTATGA+TGG - chr4_3:54535980-54535999 Msa0648120:intron 15.0%
!! CTTACATAATATTTACTATT+GGG - chr4_3:54536038-54536057 Msa0648120:intron 15.0%
!!! ATTTGTTAATTTAATGACAA+AGG + chr4_3:54536345-54536364 None:intergenic 15.0%
!!! CCCTATAAATTATAAATTTT+TGG - chr4_3:54536447-54536466 Msa0648120:intron 15.0%
!! TTAATAAATATATGTTGAGA+AGG - chr4_3:54537215-54537234 Msa0648120:intron 15.0%
!! TTTAAAAACAGTAATCAAAT+AGG + chr4_3:54537982-54538001 None:intergenic 15.0%
!!! ACAATTTCTTTTTTTAAGAA+TGG + chr4_3:54538015-54538034 None:intergenic 15.0%
!!! AATTTATCTACTGTTAATTT+TGG - chr4_3:54540098-54540117 Msa0648120:intron 15.0%
!!! ATTTATCTACTGTTAATTTT+GGG - chr4_3:54540099-54540118 Msa0648120:intron 15.0%
!! AAAATAAAAGTTATGATGTT+TGG + chr4_3:54540624-54540643 None:intergenic 15.0%
!! GAGTTAATTCAAAAAAGTTT+AGG + chr4_3:54534446-54534465 None:intergenic 20.0%
!! AGAATAAAATGCAATAATTG+TGG + chr4_3:54535020-54535039 None:intergenic 20.0%
!!! ATTTTATATGAATGCAATCA+TGG - chr4_3:54535042-54535061 Msa0648120:intron 20.0%
!! GTTTATTGTTTACTTCATTA+AGG - chr4_3:54535324-54535343 Msa0648120:intron 20.0%
!!! CATTTTTTTTTTTGGAAACT+CGG + chr4_3:54535479-54535498 None:intergenic 20.0%
!! CAAATTCATAAACATGATAA+AGG + chr4_3:54535505-54535524 None:intergenic 20.0%
!!! TGATTTGTACAAGAATAATA+AGG - chr4_3:54535735-54535754 Msa0648120:CDS 20.0%
!! GATTTGTACAAGAATAATAA+GGG - chr4_3:54535736-54535755 Msa0648120:CDS 20.0%
!! AATATACAGATATATTGATG+TGG - chr4_3:54535878-54535897 Msa0648120:CDS 20.0%
!! ATATACAGATATATTGATGT+GGG - chr4_3:54535879-54535898 Msa0648120:CDS 20.0%
!! GCTTACATAATATTTACTAT+TGG - chr4_3:54536037-54536056 Msa0648120:intron 20.0%
!!! GATATGTATTTTACTCTAAT+AGG + chr4_3:54536100-54536119 None:intergenic 20.0%
!! GATAAAAAAGAAAACTTTAG+CGG + chr4_3:54536157-54536176 None:intergenic 20.0%
!! ATTTATCATATATCAAATCC+CGG + chr4_3:54536817-54536836 None:intergenic 20.0%
!! GGATTTGATATATGATAAAT+TGG - chr4_3:54536817-54536836 Msa0648120:intron 20.0%
!!! TAAGATCTTATTTTGCATTA+CGG + chr4_3:54537032-54537051 None:intergenic 20.0%
!! ATTTATTAAGAACTGATACA+AGG + chr4_3:54537204-54537223 None:intergenic 20.0%
!! TATTCAATTTAATAAGTGTG+TGG - chr4_3:54537815-54537834 Msa0648120:CDS 20.0%
!!! TTTTTTTTTTTGCAAAAGCA+AGG + chr4_3:54538083-54538102 None:intergenic 20.0%
!! AATTAAAATTAGATCAACCT+AGG - chr4_3:54538115-54538134 Msa0648120:CDS 20.0%
!! ATTAAAATTAGATCAACCTA+GGG - chr4_3:54538116-54538135 Msa0648120:CDS 20.0%
!! AAAAACTTCAAGCAATATTA+TGG + chr4_3:54538763-54538782 None:intergenic 20.0%
!! GAGAAATTTATCATAAGAAA+AGG - chr4_3:54538953-54538972 Msa0648120:intron 20.0%
!!! TAATTGAATAAGCATTTTTC+TGG - chr4_3:54539081-54539100 Msa0648120:intron 20.0%
!!! GGTAAAACAAATTGTTTTAT+TGG - chr4_3:54539944-54539963 Msa0648120:intron 20.0%
!!! CAAAACAAAAGTTGATTAAA+TGG + chr4_3:54540142-54540161 None:intergenic 20.0%
!!! AACTTTTGTTTTGTATCTTT+AGG - chr4_3:54540149-54540168 Msa0648120:intron 20.0%
!!! AAAGGAATTTTCTGTTTTTT+AGG + chr4_3:54540323-54540342 None:intergenic 20.0%
!! AAGAAAAAGAAAAAGCTTAA+AGG - chr4_3:54540470-54540489 Msa0648120:CDS 20.0%
!!! TTACACAATTTTCTATTGTT+TGG + chr4_3:54540535-54540554 None:intergenic 20.0%
!! TAACTAATTCAATTTGTACA+AGG + chr4_3:54540586-54540605 None:intergenic 20.0%
!!! TAGTTTTACTTGTTGTTCTT+GGG + chr4_3:54534806-54534825 None:intergenic 25.0%
!! AATTTCACACACTTTATTTC+TGG + chr4_3:54534871-54534890 None:intergenic 25.0%
! TTTAATCTCAAGTTAAGTCA+TGG - chr4_3:54535082-54535101 Msa0648120:intron 25.0%
! AAAATAGGAAAAACAGAAGA+GGG + chr4_3:54535819-54535838 None:intergenic 25.0%
! AAAAATAGGAAAAACAGAAG+AGG + chr4_3:54535820-54535839 None:intergenic 25.0%
!!! ACATTATGATGGAATTTTCT+TGG - chr4_3:54535991-54536010 Msa0648120:intron 25.0%
! GTAAATATTATGTAAGCATG+AGG + chr4_3:54536034-54536053 None:intergenic 25.0%
! ATAGTAGGATACAAGAATTT+AGG - chr4_3:54536219-54536238 Msa0648120:intron 25.0%
! TTTGTGTGTATATTATTTGC+TGG - chr4_3:54536484-54536503 Msa0648120:CDS 25.0%
! AAGAAATGCTATTGTTTGAA+TGG + chr4_3:54536633-54536652 None:intergenic 25.0%
! ATGGGCAAATTATTAATACA+GGG + chr4_3:54536718-54536737 None:intergenic 25.0%
!!! AGTTTTGAATAATGGATGAT+GGG + chr4_3:54536736-54536755 None:intergenic 25.0%
! ATCATCCATTATTCAAAACT+GGG - chr4_3:54536736-54536755 Msa0648120:intron 25.0%
! TATGATAAATTGGAAGCAAA+TGG - chr4_3:54536827-54536846 Msa0648120:intron 25.0%
!! GTTTTCTCTTATTAGCAATT+TGG + chr4_3:54537177-54537196 None:intergenic 25.0%
! ATTTGCAAAAACGCATTTAT+AGG - chr4_3:54537308-54537327 Msa0648120:intron 25.0%
! AGTTTCTATCTTGTAATTGT+AGG - chr4_3:54537669-54537688 Msa0648120:CDS 25.0%
!!! ATGTTTGTTATCTGTTAAGA+TGG - chr4_3:54537767-54537786 Msa0648120:CDS 25.0%
! TTAGGACAAAGCAAAAAATA+TGG + chr4_3:54538237-54538256 None:intergenic 25.0%
!! TCATAAACAAGTTTGTTCAT+AGG + chr4_3:54538364-54538383 None:intergenic 25.0%
!!! TTTTGTTTAGCTATTCTGTA+AGG - chr4_3:54538666-54538685 Msa0648120:intron 25.0%
!!! ATCATGTTTGATACTTTTTC+TGG - chr4_3:54538711-54538730 Msa0648120:intron 25.0%
!!! TCATGTTTGATACTTTTTCT+GGG - chr4_3:54538712-54538731 Msa0648120:intron 25.0%
!!! ATGGAAAAACGATATTTTGA+AGG - chr4_3:54539389-54539408 Msa0648120:CDS 25.0%
! AAATTAATCAATTTCCATGC+AGG - chr4_3:54539480-54539499 Msa0648120:intron 25.0%
! ATTTATGAGGAAAGAAAACA+AGG + chr4_3:54539792-54539811 None:intergenic 25.0%
! TATTCAGTAAGGAAACAATT+AGG - chr4_3:54539813-54539832 Msa0648120:intron 25.0%
! AAGCTGTTATATATCTTAGA+AGG + chr4_3:54539865-54539884 None:intergenic 25.0%
!! GATATATAACAGCTTTTTAC+TGG - chr4_3:54539870-54539889 Msa0648120:intron 25.0%
!!! TTTACTGGAACATTTTTTTG+AGG - chr4_3:54539885-54539904 Msa0648120:intron 25.0%
! GGTGAATGAAAATATGAATT+TGG + chr4_3:54539976-54539995 None:intergenic 25.0%
!! AATATTCTTTTGTCATGGTA+TGG + chr4_3:54539997-54540016 None:intergenic 25.0%
! ATACCATGACAAAAGAATAT+TGG - chr4_3:54539996-54540015 Msa0648120:intron 25.0%
!! TTACCAATATTCTTTTGTCA+TGG + chr4_3:54540002-54540021 None:intergenic 25.0%
! AAATTCCTTTGATTGATGAA+AGG - chr4_3:54540333-54540352 Msa0648120:CDS 25.0%
!!! TCGTAATGTTTCGTTTTTTT+AGG - chr4_3:54540651-54540670 Msa0648120:five_prime_UTR 25.0%
TGATTGTGATTGTGATTGTT+GGG + chr4_3:54534617-54534636 None:intergenic 30.0%
!!! CTAGTTTTACTTGTTGTTCT+TGG + chr4_3:54534807-54534826 None:intergenic 30.0%
TAAAGAAGAAGAAGAAGATG+AGG - chr4_3:54534828-54534847 Msa0648120:CDS 30.0%
ATGATCAAATTGAATCTGAG+AGG + chr4_3:54534908-54534927 None:intergenic 30.0%
CAGATTCAATTTGATCATAC+TGG - chr4_3:54534910-54534929 Msa0648120:CDS 30.0%
GTGCTAACAATTTATGTGTT+GGG - chr4_3:54535368-54535387 Msa0648120:intron 30.0%
TTAAAAGACCTAATAATCCC+GGG + chr4_3:54535456-54535475 None:intergenic 30.0%
GTTAAAAGACCTAATAATCC+CGG + chr4_3:54535457-54535476 None:intergenic 30.0%
! TATATTCTGAGAACTGTTTC+AGG - chr4_3:54535651-54535670 Msa0648120:intron 30.0%
TTGTACAAGAATAATAAGGG+AGG - chr4_3:54535739-54535758 Msa0648120:CDS 30.0%
AAATAGGAAAAACAGAAGAG+GGG + chr4_3:54535818-54535837 None:intergenic 30.0%
CATATTATGGCGTAAAAAAC+AGG + chr4_3:54535853-54535872 None:intergenic 30.0%
AAAGCAATGTGATTGAGATT+TGG + chr4_3:54535935-54535954 None:intergenic 30.0%
GTCAAAATCAATCATGAAGT+GGG + chr4_3:54536184-54536203 None:intergenic 30.0%
AGTCAAAATCAATCATGAAG+TGG + chr4_3:54536185-54536204 None:intergenic 30.0%
!! ACTTCATGATTGATTTTGAC+TGG - chr4_3:54536184-54536203 Msa0648120:intron 30.0%
!!! ATTTTGACTGGAAATGCTTT+AGG - chr4_3:54536196-54536215 Msa0648120:intron 30.0%
! AGATTTCTATTTTGCTACTC+AGG - chr4_3:54536315-54536334 Msa0648120:intron 30.0%
! TGCACATTGAAATTTGAAAC+AGG - chr4_3:54536594-54536613 Msa0648120:CDS 30.0%
! GCACATTGAAATTTGAAACA+GGG - chr4_3:54536595-54536614 Msa0648120:CDS 30.0%
! CACATTGAAATTTGAAACAG+GGG - chr4_3:54536596-54536615 Msa0648120:CDS 30.0%
GATGGGCAAATTATTAATAC+AGG + chr4_3:54536719-54536738 None:intergenic 30.0%
!!! CAGTTTTGAATAATGGATGA+TGG + chr4_3:54536737-54536756 None:intergenic 30.0%
CATCATCCATTATTCAAAAC+TGG - chr4_3:54536735-54536754 Msa0648120:intron 30.0%
ATATATGTTGAGAAGGACAA+AGG - chr4_3:54537222-54537241 Msa0648120:intron 30.0%
GACACTATATTCAAAAAGAG+AGG + chr4_3:54537569-54537588 None:intergenic 30.0%
ATTCAGATCAGTAGTTGTAA+CGG - chr4_3:54537707-54537726 Msa0648120:CDS 30.0%
TGTTAAGATGGAAGTAGATA+TGG - chr4_3:54537779-54537798 Msa0648120:CDS 30.0%
AATGAAAACAAAACAACCCT+AGG + chr4_3:54538135-54538154 None:intergenic 30.0%
! AGCAAAAAATATGGAGTGTT+GGG + chr4_3:54538228-54538247 None:intergenic 30.0%
AAGCAAAAAATATGGAGTGT+TGG + chr4_3:54538229-54538248 None:intergenic 30.0%
!! CATCTTTAACTTGTTTGTCA+GGG + chr4_3:54538487-54538506 None:intergenic 30.0%
TATTCTGTAAGGTGAATAGT+TGG - chr4_3:54538677-54538696 Msa0648120:intron 30.0%
TTCTGGGTATCTTATAAGAT+AGG - chr4_3:54538728-54538747 Msa0648120:intron 30.0%
! AAGACCATAGTTGTATCTTT+TGG - chr4_3:54538841-54538860 Msa0648120:intron 30.0%
AAGACCAAAAGATACAACTA+TGG + chr4_3:54538848-54538867 None:intergenic 30.0%
! ATAGTTGTATCTTTTGGTCT+TGG - chr4_3:54538847-54538866 Msa0648120:intron 30.0%
!! TAGTTGTATCTTTTGGTCTT+GGG - chr4_3:54538848-54538867 Msa0648120:intron 30.0%
AGTTAAACAGCAGGAAAATA+CGG + chr4_3:54538900-54538919 None:intergenic 30.0%
TTGAGATATACTTGTTTGCT+TGG + chr4_3:54539055-54539074 None:intergenic 30.0%
!! TGGTTCAATTTGTTGTTATC+AGG - chr4_3:54539101-54539120 Msa0648120:intron 30.0%
!!! AGGCTCTTGTTTCTTATTTT+AGG - chr4_3:54539121-54539140 Msa0648120:intron 30.0%
CATGAGACGAATAAAAAAGA+CGG - chr4_3:54539595-54539614 Msa0648120:intron 30.0%
ATGAGACGAATAAAAAAGAC+GGG - chr4_3:54539596-54539615 Msa0648120:intron 30.0%
ACGTCTTCAAATTCAATATC+TGG + chr4_3:54539730-54539749 None:intergenic 30.0%
GATATTGAATTTGAAGACGT+CGG - chr4_3:54539730-54539749 Msa0648120:intron 30.0%
CCTTACTGAATAGATTTATG+AGG + chr4_3:54539805-54539824 None:intergenic 30.0%
CCTCATAAATCTATTCAGTA+AGG - chr4_3:54539802-54539821 Msa0648120:intron 30.0%
!! TTAATTTTGGGAAATGACAG+CGG - chr4_3:54540111-54540130 Msa0648120:intron 30.0%
!!! TGTTTTTTAGGTACACATTC+TGG + chr4_3:54540311-54540330 None:intergenic 30.0%
!!! CTCGTTGATTTTGCATTTAG+CGG - chr4_3:54534463-54534482 Msa0648120:three_prime_UTR 35.0%
GTGATTGTGATTGTGATTGT+TGG + chr4_3:54534618-54534637 None:intergenic 35.0%
!! TTTTCTGTTGATTGGGAAGT+TGG + chr4_3:54534680-54534699 None:intergenic 35.0%
!! TACTTGTTGTTCTTGGGTTT+GGG + chr4_3:54534800-54534819 None:intergenic 35.0%
!! TTACTTGTTGTTCTTGGGTT+TGG + chr4_3:54534801-54534820 None:intergenic 35.0%
ATAATTGACACCTGAACCAA+AGG + chr4_3:54534976-54534995 None:intergenic 35.0%
TGGGAAATCTACTCAATACT+AGG + chr4_3:54535241-54535260 None:intergenic 35.0%
GTATTGAGTAGATTTCCCAA+TGG - chr4_3:54535242-54535261 Msa0648120:intron 35.0%
! GTTTACTTCATTAAGGCATC+AGG - chr4_3:54535331-54535350 Msa0648120:intron 35.0%
ACACATAAATTGTTAGCACC+TGG + chr4_3:54535367-54535386 None:intergenic 35.0%
GGTGCTAACAATTTATGTGT+TGG - chr4_3:54535367-54535386 Msa0648120:intron 35.0%
TTAATCCCACCATGTATTAG+AGG + chr4_3:54535431-54535450 None:intergenic 35.0%
TAAAAGACCTAATAATCCCG+GGG + chr4_3:54535455-54535474 None:intergenic 35.0%
AGTCTACAGTTTATAGATGC+AGG + chr4_3:54535679-54535698 None:intergenic 35.0%
TAACTTACATGTCATCTCCA+AGG + chr4_3:54535768-54535787 None:intergenic 35.0%
CAGGACGATGCTAAAAAAAT+AGG + chr4_3:54535834-54535853 None:intergenic 35.0%
TGTAAGCATGAGGTAGATAA+AGG + chr4_3:54536024-54536043 None:intergenic 35.0%
! GAAAGTGCAATATTTCAGAG+AGG + chr4_3:54536124-54536143 None:intergenic 35.0%
!! TGGAAATGCTTTAGGATAGT+AGG - chr4_3:54536204-54536223 Msa0648120:intron 35.0%
! TTCTATTTTGCTACTCAGGT+CGG - chr4_3:54536319-54536338 Msa0648120:intron 35.0%
! GAAGACATACACTGTGATTT+TGG + chr4_3:54536407-54536426 None:intergenic 35.0%
! GGTTCTTTTTATCTCAACTC+TGG - chr4_3:54536543-54536562 Msa0648120:CDS 35.0%
GTCTCCTTCTTTACCAAATA+TGG + chr4_3:54536660-54536679 None:intergenic 35.0%
!!! ACTCTCCCAGTTTTGAATAA+TGG + chr4_3:54536744-54536763 None:intergenic 35.0%
TAAATTGGAAGCAAATGGAG+TGG - chr4_3:54536832-54536851 Msa0648120:intron 35.0%
!! TTACCAGTTTTGACACTTAC+AGG - chr4_3:54536864-54536883 Msa0648120:intron 35.0%
AATCCTGTAAGTGTCAAAAC+TGG + chr4_3:54536870-54536889 None:intergenic 35.0%
TTTGACACTTACAGGATTCA+CGG - chr4_3:54536872-54536891 Msa0648120:intron 35.0%
GTTCCTTATCAGATATACAC+TGG - chr4_3:54536900-54536919 Msa0648120:intron 35.0%
GTTCCAGTGTATATCTGATA+AGG + chr4_3:54536906-54536925 None:intergenic 35.0%
GAACACTGTGATTATTGATG+AGG - chr4_3:54536922-54536941 Msa0648120:intron 35.0%
TGATTATTGATGAGGCTCAT+CGG - chr4_3:54536930-54536949 Msa0648120:intron 35.0%
! ATCTTTGATTTAGTTGCACC+TGG - chr4_3:54537064-54537083 Msa0648120:intron 35.0%
TATGATGAACCCCTTAAACA+TGG - chr4_3:54537121-54537140 Msa0648120:intron 35.0%
GCAATTTGGACAAATCTATC+AGG + chr4_3:54537163-54537182 None:intergenic 35.0%
!! TTTATAAGGCACTGAATGTC+AGG + chr4_3:54537349-54537368 None:intergenic 35.0%
CATTCAGTGCCTTATAAACA+AGG - chr4_3:54537351-54537370 Msa0648120:intron 35.0%
! AAGGTAGGTCCTTGTTTATA+AGG + chr4_3:54537363-54537382 None:intergenic 35.0%
AACATTCAACTTGAGTGAGA+GGG + chr4_3:54537399-54537418 None:intergenic 35.0%
!! CTCAAGTTGAATGTTGCAAA+AGG - chr4_3:54537404-54537423 Msa0648120:intron 35.0%
AGGTTATCTTTGTGAAGGTA+AGG + chr4_3:54537454-54537473 None:intergenic 35.0%
ATGGAAGGACAATACAATAG+GGG + chr4_3:54537498-54537517 None:intergenic 35.0%
CATGGAAGGACAATACAATA+GGG + chr4_3:54537499-54537518 None:intergenic 35.0%
!! AGCTAATTTGTTCATAGCAC+TGG - chr4_3:54537608-54537627 Msa0648120:CDS 35.0%
TTCAGATCAGTAGTTGTAAC+GGG - chr4_3:54537708-54537727 Msa0648120:CDS 35.0%
AGTAGATATGGACAAGGATA+TGG - chr4_3:54537791-54537810 Msa0648120:CDS 35.0%
!! AAAAAATATGGAGTGTTGGG+TGG + chr4_3:54538225-54538244 None:intergenic 35.0%
AAGACAATCAAATCAAGCCA+TGG - chr4_3:54538289-54538308 Msa0648120:CDS 35.0%
AGACAATCAAATCAAGCCAT+GGG - chr4_3:54538290-54538309 Msa0648120:CDS 35.0%
!! GCATCTTTAACTTGTTTGTC+AGG + chr4_3:54538488-54538507 None:intergenic 35.0%
TTGAAAAGCTGTTGTTGTCA+TGG - chr4_3:54538621-54538640 Msa0648120:intron 35.0%
! TTGTTGTCATGGTTTTCACA+TGG - chr4_3:54538632-54538651 Msa0648120:intron 35.0%
AGCAATAGATAAGAGGAACA+AGG + chr4_3:54538819-54538838 None:intergenic 35.0%
GTCTTGAAGCAATAGATAAG+AGG + chr4_3:54538826-54538845 None:intergenic 35.0%
!!! AGTTGTATCTTTTGGTCTTG+GGG - chr4_3:54538849-54538868 Msa0648120:intron 35.0%
! TAACTTGAGCTACTCTTTTC+AGG - chr4_3:54538915-54538934 Msa0648120:intron 35.0%
TGGGATCAAATATTACGACA+CGG + chr4_3:54539202-54539221 None:intergenic 35.0%
TCGTAATATTTGATCCCAAC+TGG - chr4_3:54539204-54539223 Msa0648120:intron 35.0%
! AGAACTAGTTTATTCTCGTC+AGG - chr4_3:54539325-54539344 Msa0648120:intron 35.0%
ACATCAAAATACACAGGTTG+TGG + chr4_3:54539425-54539444 None:intergenic 35.0%
! AGGATTGCAAAGCATTTCAA+GGG - chr4_3:54539500-54539519 Msa0648120:intron 35.0%
!! AAGTTTGTTAGCATCAGAGT+CGG - chr4_3:54539663-54539682 Msa0648120:intron 35.0%
!!! ACATTTTTTTGAGGCGATCA+TGG - chr4_3:54539894-54539913 Msa0648120:intron 35.0%
CTACATATGCACAAAAATGC+TGG - chr4_3:54539923-54539942 Msa0648120:intron 35.0%
GAATCTTTGCTTTGTAACTG+TGG - chr4_3:54540047-54540066 Msa0648120:intron 35.0%
TAACTGTGGCCATTGAAATT+AGG - chr4_3:54540061-54540080 Msa0648120:intron 35.0%
AACTGTGGCCATTGAAATTA+GGG - chr4_3:54540062-54540081 Msa0648120:intron 35.0%
GCTTTACTCCCTAATTTCAA+TGG + chr4_3:54540073-54540092 None:intergenic 35.0%
!! ATTCTGGTTTCTTCCTTTCA+TGG + chr4_3:54540295-54540314 None:intergenic 35.0%
CTCTTCCTTTCATCAATCAA+AGG + chr4_3:54540341-54540360 None:intergenic 35.0%
! TTTTTCTCTCTCTACTGAAG+TGG + chr4_3:54540435-54540454 None:intergenic 35.0%
TATGTTGGGAAAGGAAATCG+CGG + chr4_3:54534771-54534790 None:intergenic 40.0%
GGTTTGGGAATGGTTATGTT+GGG + chr4_3:54534785-54534804 None:intergenic 40.0%
AGAAGAAGAAGAAGATGAGG+AGG - chr4_3:54534831-54534850 Msa0648120:CDS 40.0%
GACAAAAGCAAAGGCTCAAA+AGG + chr4_3:54534937-54534956 None:intergenic 40.0%
TCTCAAGTTAAGTCATGGAC+TGG - chr4_3:54535087-54535106 Msa0648120:intron 40.0%
ACGTGTCTATTGTCCAATAC+GGG + chr4_3:54535197-54535216 None:intergenic 40.0%
GACGTGTCTATTGTCCAATA+CGG + chr4_3:54535198-54535217 None:intergenic 40.0%
TTGAGTAGATTTCCCAATGG+CGG - chr4_3:54535245-54535264 Msa0648120:intron 40.0%
GATTAATCCCCGGGATTATT+AGG - chr4_3:54535445-54535464 Msa0648120:CDS 40.0%
!! AATAATAAGGGAGGCATCCT+TGG - chr4_3:54535748-54535767 Msa0648120:CDS 40.0%
! GAAATTTGAAACAGGGGTCT+TGG - chr4_3:54536602-54536621 Msa0648120:CDS 40.0%
GCATTTCTTGCTGCCATATT+TGG - chr4_3:54536644-54536663 Msa0648120:CDS 40.0%
GCTGCCATATTTGGTAAAGA+AGG - chr4_3:54536653-54536672 Msa0648120:CDS 40.0%
! TTCAGCGTTGCCATTTATCA+TGG - chr4_3:54536785-54536804 Msa0648120:intron 40.0%
CCATTTATCATGGTGCAAAC+CGG - chr4_3:54536795-54536814 Msa0648120:intron 40.0%
CATTTATCATGGTGCAAACC+GGG - chr4_3:54536796-54536815 Msa0648120:intron 40.0%
ATTAAAACCCTGCGACGATA+TGG - chr4_3:54536995-54537014 Msa0648120:intron 40.0%
GGGGTTCATCATAAAACTCA+CGG + chr4_3:54537114-54537133 None:intergenic 40.0%
TGACCTCTGACCATGTTTAA+GGG + chr4_3:54537134-54537153 None:intergenic 40.0%
TTGACCTCTGACCATGTTTA+AGG + chr4_3:54537135-54537154 None:intergenic 40.0%
TTGGACAAATCTATCAGGAG+CGG + chr4_3:54537158-54537177 None:intergenic 40.0%
! ACCATAGGGCATCTTATGAT+GGG - chr4_3:54537250-54537269 Msa0648120:intron 40.0%
CAACATTCAACTTGAGTGAG+AGG + chr4_3:54537400-54537419 None:intergenic 40.0%
CATCGAGGTTATCTTTGTGA+AGG + chr4_3:54537459-54537478 None:intergenic 40.0%
CACAAAGATAACCTCGATGA+TGG - chr4_3:54537460-54537479 Msa0648120:intron 40.0%
ATGAATCACATCCATCATCG+AGG + chr4_3:54537474-54537493 None:intergenic 40.0%
GCATGGAAGGACAATACAAT+AGG + chr4_3:54537500-54537519 None:intergenic 40.0%
TAACCTGTTGTAGCTTGACA+AGG + chr4_3:54537522-54537541 None:intergenic 40.0%
! TAGCACTGGACATCTATTGT+AGG - chr4_3:54537622-54537641 Msa0648120:CDS 40.0%
TCAGATCAGTAGTTGTAACG+GGG - chr4_3:54537709-54537728 Msa0648120:CDS 40.0%
AGGCGTGAATTATCTGAAGA+AGG - chr4_3:54537743-54537762 Msa0648120:CDS 40.0%
GATGGAAGTAGATATGGACA+AGG - chr4_3:54537785-54537804 Msa0648120:CDS 40.0%
TTAGTAACCACACTGATGGA+GGG - chr4_3:54537915-54537934 Msa0648120:CDS 40.0%
GATGCGTAGGAACAAAAGTA+AGG + chr4_3:54538166-54538185 None:intergenic 40.0%
GACAATCAAATCAAGCCATG+GGG - chr4_3:54538291-54538310 Msa0648120:CDS 40.0%
TGTTTGTCAGGGTCATCTTT+GGG + chr4_3:54538476-54538495 None:intergenic 40.0%
TTGTTTGTCAGGGTCATCTT+TGG + chr4_3:54538477-54538496 None:intergenic 40.0%
CACCAACTAAGTCAATGTCT+GGG + chr4_3:54538535-54538554 None:intergenic 40.0%
!! CAGACATTGACTTAGTTGGT+GGG - chr4_3:54538534-54538553 Msa0648120:intron 40.0%
ATGCAGAATGAGAGTTTCCT+GGG - chr4_3:54538560-54538579 Msa0648120:intron 40.0%
CTAAGTGATGCAGAACATTG+TGG - chr4_3:54538584-54538603 Msa0648120:intron 40.0%
AGTAGCTCAAGTTAAACAGC+AGG + chr4_3:54538909-54538928 None:intergenic 40.0%
TACTGCTTCTCAAGACTTGA+TGG - chr4_3:54538977-54538996 Msa0648120:intron 40.0%
ACTGCTTCTCAAGACTTGAT+GGG - chr4_3:54538978-54538997 Msa0648120:intron 40.0%
AGAGACTGGCGTAAATTAGT+TGG + chr4_3:54539010-54539029 None:intergenic 40.0%
AACTAATTTACGCCAGTCTC+TGG - chr4_3:54539009-54539028 Msa0648120:intron 40.0%
TGAAATCATCAACCAGAGAC+TGG + chr4_3:54539024-54539043 None:intergenic 40.0%
CCTTTCGATATGGACAGAAA+CGG - chr4_3:54539261-54539280 Msa0648120:intron 40.0%
TCTCAAACATTGCTGTCTCT+GGG - chr4_3:54539363-54539382 Msa0648120:CDS 40.0%
!!! ACGATATTTTGAAGGTGTCC+AGG - chr4_3:54539397-54539416 Msa0648120:CDS 40.0%
GCTGCAACATCAAAATACAC+AGG + chr4_3:54539431-54539450 None:intergenic 40.0%
AAATGCTTTGCAATCCTGCA+TGG + chr4_3:54539497-54539516 None:intergenic 40.0%
! CAGGATTGCAAAGCATTTCA+AGG - chr4_3:54539499-54539518 Msa0648120:intron 40.0%
! GGATTGCAAAGCATTTCAAG+GGG - chr4_3:54539501-54539520 Msa0648120:intron 40.0%
GATAACTGCCTTTGAATCAC+TGG + chr4_3:54540218-54540237 None:intergenic 40.0%
GAGAGCTTGCATTTAGCAAA+TGG - chr4_3:54540399-54540418 Msa0648120:CDS 40.0%
AGGTTAAGCAGTGATTCTCA+TGG - chr4_3:54540490-54540509 Msa0648120:CDS 40.0%
ATGGATGACAAGACAAATGC+AGG - chr4_3:54540509-54540528 Msa0648120:CDS 40.0%
AGAAGGGATTGTGAGGAAGA+TGG + chr4_3:54534643-54534662 None:intergenic 45.0%
GGAAGTTGGAATCGAAATCG+CGG + chr4_3:54534666-54534685 None:intergenic 45.0%
!! TGGGGGGTTTTCTGTTGATT+GGG + chr4_3:54534687-54534706 None:intergenic 45.0%
! TTGGGGGGTTTTCTGTTGAT+TGG + chr4_3:54534688-54534707 None:intergenic 45.0%
ATGTTGGGAAAGGAAATCGC+GGG + chr4_3:54534770-54534789 None:intergenic 45.0%
GGGAATGGTTATGTTGGGAA+AGG + chr4_3:54534780-54534799 None:intergenic 45.0%
GGGTTTGGGAATGGTTATGT+TGG + chr4_3:54534786-54534805 None:intergenic 45.0%
GTTGTTCTTGGGTTTGGGAA+TGG + chr4_3:54534795-54534814 None:intergenic 45.0%
AGAAGATGAGGAGGAAGAAG+AGG - chr4_3:54534840-54534859 Msa0648120:CDS 45.0%
CCATCAGAGGACAAAAGCAA+AGG + chr4_3:54534946-54534965 None:intergenic 45.0%
!! CCTTTGCTTTTGTCCTCTGA+TGG - chr4_3:54534943-54534962 Msa0648120:CDS 45.0%
CAAAGGAAGTTCACCATCAG+AGG + chr4_3:54534959-54534978 None:intergenic 45.0%
! CTCTGATGGTGAACTTCCTT+TGG - chr4_3:54534957-54534976 Msa0648120:intron 45.0%
! TGGTGAACTTCCTTTGGTTC+AGG - chr4_3:54534963-54534982 Msa0648120:intron 45.0%
!!! AACCACGTGTGTGTTGGTTT+TGG - chr4_3:54535155-54535174 Msa0648120:intron 45.0%
CGTGTCTATTGTCCAATACG+GGG + chr4_3:54535196-54535215 None:intergenic 45.0%
TGAGTAGATTTCCCAATGGC+GGG - chr4_3:54535246-54535265 Msa0648120:intron 45.0%
AGTCAGAGCAAAGCTCTGTA+TGG + chr4_3:54535399-54535418 None:intergenic 45.0%
AGCTTTGCTCTGACTTCAGT+TGG - chr4_3:54535404-54535423 Msa0648120:CDS 45.0%
GCTTTGCTCTGACTTCAGTT+GGG - chr4_3:54535405-54535424 Msa0648120:CDS 45.0%
TCAGTTGGGCCTCTAATACA+TGG - chr4_3:54535419-54535438 Msa0648120:CDS 45.0%
TTGGGCCTCTAATACATGGT+GGG - chr4_3:54535423-54535442 Msa0648120:CDS 45.0%
! TACATGGTGGGATTAATCCC+CGG - chr4_3:54535435-54535454 Msa0648120:CDS 45.0%
AAGAGGGGAAAAGTGAGAAG+AGG + chr4_3:54535803-54535822 None:intergenic 45.0%
CTACCATGCTTTGCATGACA+GGG + chr4_3:54536075-54536094 None:intergenic 45.0%
TCTACCATGCTTTGCATGAC+AGG + chr4_3:54536076-54536095 None:intergenic 45.0%
GGGAGAGTGAATTCTCTAAG+TGG - chr4_3:54536756-54536775 Msa0648120:intron 45.0%
! CCGGTTTGCACCATGATAAA+TGG + chr4_3:54536798-54536817 None:intergenic 45.0%
ATTGGAAGCAAATGGAGTGG+AGG - chr4_3:54536835-54536854 Msa0648120:intron 45.0%
AGTAAGACCATATCGTCGCA+GGG + chr4_3:54537005-54537024 None:intergenic 45.0%
! TGCGACGATATGGTCTTACT+GGG - chr4_3:54537005-54537024 Msa0648120:intron 45.0%
AACCCCTTAAACATGGTCAG+AGG - chr4_3:54537128-54537147 Msa0648120:intron 45.0%
GACCTCTGACCATGTTTAAG+GGG + chr4_3:54537133-54537152 None:intergenic 45.0%
AGGACAAAGGAAGAGACCAT+AGG - chr4_3:54537235-54537254 Msa0648120:intron 45.0%
GGACAAAGGAAGAGACCATA+GGG - chr4_3:54537236-54537255 Msa0648120:intron 45.0%
! GACCATAGGGCATCTTATGA+TGG - chr4_3:54537249-54537268 Msa0648120:intron 45.0%
! CCATAGGGCATCTTATGATG+GGG - chr4_3:54537251-54537270 Msa0648120:intron 45.0%
AAGGACCTACCTTGTAGTTG+TGG - chr4_3:54537370-54537389 Msa0648120:intron 45.0%
TGCAAAAGGACTGTACCAGA+TGG - chr4_3:54537418-54537437 Msa0648120:intron 45.0%
CTGTACCAGATGGAGCTATT+TGG - chr4_3:54537428-54537447 Msa0648120:intron 45.0%
TAAGGCCAAATAGCTCCATC+TGG + chr4_3:54537436-54537455 None:intergenic 45.0%
TGTTGTAGCTTGACAAGGCA+TGG + chr4_3:54537517-54537536 None:intergenic 45.0%
ATGCCTTGTCAAGCTACAAC+AGG - chr4_3:54537516-54537535 Msa0648120:intron 45.0%
GCTCTTAGTAACCACACTGA+TGG - chr4_3:54537911-54537930 Msa0648120:CDS 45.0%
CTTAGTAACCACACTGATGG+AGG - chr4_3:54537914-54537933 Msa0648120:CDS 45.0%
CATAGCGTGTGCAAACTGAA+AGG + chr4_3:54538327-54538346 None:intergenic 45.0%
TTTGCACACGCTATGTTCAG+TGG - chr4_3:54538332-54538351 Msa0648120:CDS 45.0%
!! GTGAAGAAGCATCTTGAGCA+TGG + chr4_3:54538387-54538406 None:intergenic 45.0%
! GGTTTGGCTTAATCAGCTCA+AGG + chr4_3:54538454-54538473 None:intergenic 45.0%
GTTTGTCAGGGTCATCTTTG+GGG + chr4_3:54538475-54538494 None:intergenic 45.0%
!! AAGTTTGCTGCTGCTGTCTA+TGG - chr4_3:54538509-54538528 Msa0648120:intron 45.0%
CCACCAACTAAGTCAATGTC+TGG + chr4_3:54538536-54538555 None:intergenic 45.0%
!! CCAGACATTGACTTAGTTGG+TGG - chr4_3:54538533-54538552 Msa0648120:intron 45.0%
CATGCAGAATGAGAGTTTCC+TGG - chr4_3:54538559-54538578 Msa0648120:intron 45.0%
!! AGCTACTCTTTTCAGGATGC+TGG - chr4_3:54538922-54538941 Msa0648120:intron 45.0%
TTTCAGGATGCTGGACATAC+TGG - chr4_3:54538931-54538950 Msa0648120:intron 45.0%
CTGGCGTAAATTAGTTGGAG+TGG + chr4_3:54539005-54539024 None:intergenic 45.0%
TTCCTGATATCAACTCGTGC+TGG - chr4_3:54539146-54539165 Msa0648120:intron 45.0%
! TGATATCAACTCGTGCTGGT+GGG - chr4_3:54539150-54539169 Msa0648120:intron 45.0%
TCTTGTGAGGGATTCCAGTT+GGG + chr4_3:54539221-54539240 None:intergenic 45.0%
GAATCCCTCACAAGACTTAC+AGG - chr4_3:54539226-54539245 Msa0648120:intron 45.0%
! TGAGCCTGTAAGTCTTGTGA+GGG + chr4_3:54539233-54539252 None:intergenic 45.0%
CCGTTTCTGTCCATATCGAA+AGG + chr4_3:54539264-54539283 None:intergenic 45.0%
CTCTCAAACATTGCTGTCTC+TGG - chr4_3:54539362-54539381 Msa0648120:CDS 45.0%
AATACACAGGTTGTGGTACC+TGG + chr4_3:54539418-54539437 None:intergenic 45.0%
! GCATTTCAAGGGGAGCTTTT+TGG - chr4_3:54539511-54539530 Msa0648120:intron 45.0%
ATGCGATTCAACGATCTCAC+TGG + chr4_3:54539578-54539597 None:intergenic 45.0%
! GTCATGTTCTGAATCTGCGA+GGG - chr4_3:54539693-54539712 Msa0648120:intron 45.0%
ACTGCCTTTGAATCACTGGT+CGG + chr4_3:54540214-54540233 None:intergenic 45.0%
!! TCATGGACTAAAGTGCTGCT+TGG + chr4_3:54540278-54540297 None:intergenic 45.0%
GCAGCACTTTAGTCCATGAA+AGG - chr4_3:54540279-54540298 Msa0648120:CDS 45.0%
CTCTGCAAGGAGGCTAAATT+GGG + chr4_3:54540366-54540385 None:intergenic 45.0%
ACTCTGCAAGGAGGCTAAAT+TGG + chr4_3:54540367-54540386 None:intergenic 45.0%
! ATTTTGCATTTAGCGGCGCG+CGG - chr4_3:54534470-54534489 Msa0648120:three_prime_UTR 50.0%
GATGTCGCTGCAAACTCTGA+AGG - chr4_3:54534567-54534586 Msa0648120:three_prime_UTR 50.0%
GGAATCGAAATCGCGGAGAA+GGG + chr4_3:54534659-54534678 None:intergenic 50.0%
TGGAATCGAAATCGCGGAGA+AGG + chr4_3:54534660-54534679 None:intergenic 50.0%
! TGGTGGGCAAGAGAGGATTT+GGG + chr4_3:54534706-54534725 None:intergenic 50.0%
TTCAAGGAGACGAAGGTGGT+GGG + chr4_3:54534722-54534741 None:intergenic 50.0%
GCTGAAAAGGTGGGTCATCA+GGG + chr4_3:54534747-54534766 None:intergenic 50.0%
TGTTGGGAAAGGAAATCGCG+GGG + chr4_3:54534769-54534788 None:intergenic 50.0%
GTCCAAAACCAACACACACG+TGG + chr4_3:54535160-54535179 None:intergenic 50.0%
CCAATACGGGGTGATCTTGT+TGG + chr4_3:54535184-54535203 None:intergenic 50.0%
CCAACAAGATCACCCCGTAT+TGG - chr4_3:54535181-54535200 Msa0648120:intron 50.0%
TGCTAGTTGAACCCGCCATT+GGG + chr4_3:54535260-54535279 None:intergenic 50.0%
GAGCAAAGCTCTGTATGGAC+TGG + chr4_3:54535394-54535413 None:intergenic 50.0%
GTTGGGCCTCTAATACATGG+TGG - chr4_3:54535422-54535441 Msa0648120:CDS 50.0%
! ACATGGTGGGATTAATCCCC+GGG - chr4_3:54535436-54535455 Msa0648120:CDS 50.0%
ACTGCTTGAGCATCAGAGAG+TGG - chr4_3:54535696-54535715 Msa0648120:intron 50.0%
CTGCTTGAGCATCAGAGAGT+GGG - chr4_3:54535697-54535716 Msa0648120:intron 50.0%
AGGGGAAAAGTGAGAAGAGG+AGG + chr4_3:54535800-54535819 None:intergenic 50.0%
CTTTGCATGACAGGGTTCTC+AGG + chr4_3:54536067-54536086 None:intergenic 50.0%
GAACCCTGTCATGCAAAGCA+TGG - chr4_3:54536069-54536088 Msa0648120:intron 50.0%
CAGTAAGACCATATCGTCGC+AGG + chr4_3:54537006-54537025 None:intergenic 50.0%
! CTGCGACGATATGGTCTTAC+TGG - chr4_3:54537004-54537023 Msa0648120:intron 50.0%
TTAGTTGCACCTGGATCCCT+TGG - chr4_3:54537073-54537092 Msa0648120:intron 50.0%
CCCCATCATAAGATGCCCTA+TGG + chr4_3:54537254-54537273 None:intergenic 50.0%
! AGGGCATCTTATGATGGGGA+AGG - chr4_3:54537255-54537274 Msa0648120:intron 50.0%
GGCTACCACAACTACAAGGT+AGG + chr4_3:54537378-54537397 None:intergenic 50.0%
AGAGGGCTACCACAACTACA+AGG + chr4_3:54537382-54537401 None:intergenic 50.0%
GTAGCTTGACAAGGCATGGA+AGG + chr4_3:54537513-54537532 None:intergenic 50.0%
! GTAACGGGGATGAGAAAGAG+AGG - chr4_3:54537723-54537742 Msa0648120:CDS 50.0%
GACAAATCCCTCCATCAGTG+TGG + chr4_3:54537925-54537944 None:intergenic 50.0%
ACAGCTCACAAGTGATGCGT+AGG + chr4_3:54538179-54538198 None:intergenic 50.0%
GTGGCAATGGTAACAGTGGT+GGG + chr4_3:54538206-54538225 None:intergenic 50.0%
TTGGGTGGCAATGGTAACAG+TGG + chr4_3:54538210-54538229 None:intergenic 50.0%
!! TATGGAGTGTTGGGTGGCAA+TGG + chr4_3:54538219-54538238 None:intergenic 50.0%
AAAGGCAATAGTGCTCCCCA+TGG + chr4_3:54538309-54538328 None:intergenic 50.0%
!! TCAGGGTCATCTTTGGGGTT+TGG + chr4_3:54538470-54538489 None:intergenic 50.0%
!! GGCCCAGACATTGACTTAGT+TGG - chr4_3:54538530-54538549 Msa0648120:intron 50.0%
GTTCTGCATCACTTAGACCC+AGG + chr4_3:54538580-54538599 None:intergenic 50.0%
!! CACCAGCACGAGTTGATATC+AGG + chr4_3:54539151-54539170 None:intergenic 50.0%
CTGATATCAACTCGTGCTGG+TGG - chr4_3:54539149-54539168 Msa0648120:intron 50.0%
GTCTTGTGAGGGATTCCAGT+TGG + chr4_3:54539222-54539241 None:intergenic 50.0%
! CTGAGCCTGTAAGTCTTGTG+AGG + chr4_3:54539234-54539253 None:intergenic 50.0%
CTCACAAGACTTACAGGCTC+AGG - chr4_3:54539232-54539251 Msa0648120:intron 50.0%
AAGACTTACAGGCTCAGGAC+AGG - chr4_3:54539237-54539256 Msa0648120:intron 50.0%
CAGGACAGGTCCTTTCGATA+TGG - chr4_3:54539251-54539270 Msa0648120:intron 50.0%
TGGACAGAAACGGCATGTTG+TGG - chr4_3:54539271-54539290 Msa0648120:intron 50.0%
GTATTCCGTCTTCTCTCAGC+TGG - chr4_3:54539293-54539312 Msa0648120:intron 50.0%
GTGAACCAGCTGAGAGAAGA+CGG + chr4_3:54539301-54539320 None:intergenic 50.0%
! CATTGCTGTCTCTGGGAAGA+TGG - chr4_3:54539370-54539389 Msa0648120:CDS 50.0%
TAGCATCAGAGTCGGAAACC+AGG - chr4_3:54539671-54539690 Msa0648120:intron 50.0%
CGCAGATTCAGAACATGACC+TGG + chr4_3:54539692-54539711 None:intergenic 50.0%
! GGTCATGTTCTGAATCTGCG+AGG - chr4_3:54539692-54539711 Msa0648120:intron 50.0%
ACTCCCGACCAGTGATTCAA+AGG - chr4_3:54540207-54540226 Msa0648120:CDS 50.0%
CTGCCTTTGAATCACTGGTC+GGG + chr4_3:54540213-54540232 None:intergenic 50.0%
GCTTTCGCCATCGCTTGAAA+GGG + chr4_3:54540252-54540271 None:intergenic 50.0%
TAGCCTCCTTGCAGAGTCTA+TGG - chr4_3:54540370-54540389 Msa0648120:CDS 50.0%
AGCCTCCTTGCAGAGTCTAT+GGG - chr4_3:54540371-54540390 Msa0648120:CDS 50.0%
CTTGCAGAGTCTATGGGCAT+GGG - chr4_3:54540377-54540396 Msa0648120:CDS 50.0%
ATCGCGGAGAAGGGATTGTG+AGG + chr4_3:54534650-54534669 None:intergenic 55.0%
TGGGCAAGAGAGGATTTGGG+GGG + chr4_3:54534703-54534722 None:intergenic 55.0%
GTGGGCAAGAGAGGATTTGG+GGG + chr4_3:54534704-54534723 None:intergenic 55.0%
GGTGGGCAAGAGAGGATTTG+GGG + chr4_3:54534705-54534724 None:intergenic 55.0%
!! GTGGTGGGCAAGAGAGGATT+TGG + chr4_3:54534707-54534726 None:intergenic 55.0%
CTTCAAGGAGACGAAGGTGG+TGG + chr4_3:54534723-54534742 None:intergenic 55.0%
GGTCTTCAAGGAGACGAAGG+TGG + chr4_3:54534726-54534745 None:intergenic 55.0%
CAGGGTCTTCAAGGAGACGA+AGG + chr4_3:54534729-54534748 None:intergenic 55.0%
GTGGGTCATCAGGGTCTTCA+AGG + chr4_3:54534738-54534757 None:intergenic 55.0%
GGCTGAAAAGGTGGGTCATC+AGG + chr4_3:54534748-54534767 None:intergenic 55.0%
AATCGCGGGGCTGAAAAGGT+GGG + chr4_3:54534756-54534775 None:intergenic 55.0%
AAATCGCGGGGCTGAAAAGG+TGG + chr4_3:54534757-54534776 None:intergenic 55.0%
AGGAAATCGCGGGGCTGAAA+AGG + chr4_3:54534760-54534779 None:intergenic 55.0%
GAGTGCAACCACGTGTGTGT+TGG - chr4_3:54535149-54535168 Msa0648120:intron 55.0%
GTGCTAGTTGAACCCGCCAT+TGG + chr4_3:54535261-54535280 None:intergenic 55.0%
GCATCAGGTTCGAATCTGCC+AGG - chr4_3:54535346-54535365 Msa0648120:intron 55.0%
CACTCGCGTCTCGCTAAGAA+TGG + chr4_3:54536684-54536703 None:intergenic 55.0%
CATTCTTAGCGAGACGCGAG+TGG - chr4_3:54536682-54536701 Msa0648120:intron 55.0%
! GAAGTGTTCCCGCGTTCCAA+GGG + chr4_3:54537092-54537111 None:intergenic 55.0%
! GGCACTGAATGTCAGGAAGC+TGG + chr4_3:54537342-54537361 None:intergenic 55.0%
GGTGGCAATGGTAACAGTGG+TGG + chr4_3:54538207-54538226 None:intergenic 55.0%
! CGACACGGTTTGCACTGACA+AGG + chr4_3:54539187-54539206 None:intergenic 55.0%
!! ATCGCTTGAAAGGGTGCTGC+TGG + chr4_3:54540243-54540262 None:intergenic 55.0%
AGCAGCACCCTTTCAAGCGA+TGG - chr4_3:54540242-54540261 Msa0648120:CDS 55.0%
CGCTTTCGCCATCGCTTGAA+AGG + chr4_3:54540253-54540272 None:intergenic 55.0%
TGCCCATAGACTCTGCAAGG+AGG + chr4_3:54540376-54540395 None:intergenic 55.0%
CCATGCCCATAGACTCTGCA+AGG + chr4_3:54540379-54540398 None:intergenic 55.0%
CCTTGCAGAGTCTATGGGCA+TGG - chr4_3:54540376-54540395 Msa0648120:CDS 55.0%
!! ACGAAGGTGGTGGGCAAGAG+AGG + chr4_3:54534713-54534732 None:intergenic 60.0%
CACCTGGATCCCTTGGAACG+CGG - chr4_3:54537080-54537099 Msa0648120:intron 60.0%
ACCTGGATCCCTTGGAACGC+GGG - chr4_3:54537081-54537100 Msa0648120:intron 60.0%
!! GGAAGTGTTCCCGCGTTCCA+AGG + chr4_3:54537093-54537112 None:intergenic 60.0%
!! TCAACTCGTGCTGGTGGGCT+CGG - chr4_3:54539155-54539174 Msa0648120:intron 60.0%
TCCCGCGTTCCAAGGGATCC+AGG + chr4_3:54537085-54537104 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 54534441 54540694 54534441 ID=Msa0648120;Name=Msa0648120
chr4_3 mRNA 54534441 54540694 54534441 ID=Msa0648120-mRNA-1;Parent=Msa0648120;Name=Msa0648120-mRNA-1;_AED=0.02;_eAED=0.02;_QI=127|1|1|1|1|1|8|198|890
chr4_3 exon 54534441 54534964 54534441 ID=Msa0648120-mRNA-1:exon:13802;Parent=Msa0648120-mRNA-1
chr4_3 exon 54535384 54535633 54535384 ID=Msa0648120-mRNA-1:exon:13801;Parent=Msa0648120-mRNA-1
chr4_3 exon 54535717 54535992 54535717 ID=Msa0648120-mRNA-1:exon:13800;Parent=Msa0648120-mRNA-1
chr4_3 exon 54536072 54536198 54536072 ID=Msa0648120-mRNA-1:exon:13799;Parent=Msa0648120-mRNA-1
chr4_3 exon 54536448 54536695 54536448 ID=Msa0648120-mRNA-1:exon:13798;Parent=Msa0648120-mRNA-1
chr4_3 exon 54537598 54538519 54537598 ID=Msa0648120-mRNA-1:exon:13797;Parent=Msa0648120-mRNA-1
chr4_3 exon 54539356 54539462 54539356 ID=Msa0648120-mRNA-1:exon:13796;Parent=Msa0648120-mRNA-1
chr4_3 exon 54540151 54540694 54540151 ID=Msa0648120-mRNA-1:exon:13795;Parent=Msa0648120-mRNA-1
chr4_3 five_prime_UTR 54540568 54540694 54540568 ID=Msa0648120-mRNA-1:five_prime_utr;Parent=Msa0648120-mRNA-1
chr4_3 CDS 54540151 54540567 54540151 ID=Msa0648120-mRNA-1:cds;Parent=Msa0648120-mRNA-1
chr4_3 CDS 54539356 54539462 54539356 ID=Msa0648120-mRNA-1:cds;Parent=Msa0648120-mRNA-1
chr4_3 CDS 54537598 54538519 54537598 ID=Msa0648120-mRNA-1:cds;Parent=Msa0648120-mRNA-1
chr4_3 CDS 54536448 54536695 54536448 ID=Msa0648120-mRNA-1:cds;Parent=Msa0648120-mRNA-1
chr4_3 CDS 54536072 54536198 54536072 ID=Msa0648120-mRNA-1:cds;Parent=Msa0648120-mRNA-1
chr4_3 CDS 54535717 54535992 54535717 ID=Msa0648120-mRNA-1:cds;Parent=Msa0648120-mRNA-1
chr4_3 CDS 54535384 54535633 54535384 ID=Msa0648120-mRNA-1:cds;Parent=Msa0648120-mRNA-1
chr4_3 CDS 54534639 54534964 54534639 ID=Msa0648120-mRNA-1:cds;Parent=Msa0648120-mRNA-1
chr4_3 three_prime_UTR 54534441 54534638 54534441 ID=Msa0648120-mRNA-1:three_prime_utr;Parent=Msa0648120-mRNA-1
Gene Sequence

>Msa0648120

ATGTCGCTGCAAACTCTGAAGGAATTAACACTGAGACACTGCTCAACCCAACAATCACAATCACAATCACAACCATCTTCCTCACAATCCCTTCTCCGCGATTTCGATTCCAACTTCCCAATCAACAGAAAACCCCCCAAATCCTCTCTTGCCCACCACCTTCGTCTCCTTGAAGACCCTGATGACCCACCTTTTCAGCCCCGCGATTTCCTTTCCCAACATAACCATTCCCAAACCCAAGAACAACAAGTAAAACTAGATAAAGAAGAAGAAGAAGATGAGGAGGAAGAAGAGGAAGAGCCAGAAATAAAGTGTGTGAAATTTAGTTCTGTTACATCCTCTCAGATTCAATTTGATCATACTGGACCTTTTGAGCCTTTGCTTTTGTCCTCTGATGGTGAACTTCCTTTGGTTCAGGTTCCTGCATCTATAAACTGTAGACTGCTTGAGCATCAGAGAGTGGGAGTGAAGTTTCTGTATGATTTGTACAAGAATAATAAGGGAGGCATCCTTGGAGATGACATGGGTCTTGGAAAGACCATTCAAACAATAGCATTTCTTGCTGCCATATTTGGTAAAGAAGGAGACTCCATTCTTAGCGAGACGCGAGTGGAGAAAAGAGACCCTGTATTAATAATTTGCCCATCATCCATTATTCAAAACTGGGAGAGTGAATTCTCTAAGTGGTCTAACTTCAGCGTTGCCATTTATCATGGTGCAAACCGGGATTTGATATATGATAAATTGGAAGCAAATGGAGTGGAGGTACTTATTACCAGTTTTGACACTTACAGGATTCACGGCAGCAGTTCCTTATCAGATATACACTGGAACACTGTGATTATTGATGAGGCTCATCGGCTTAAGAATGAGAAATCAAAACTCTATAAAGCATGTTTAGAAATTAAAACCCTGCGACGATATGGTCTTACTGGGACCGTAATGCAAAATAAGATCTTAGAATTGTTCAATATCTTTGATTTAGTTGCACCTGGATCCCTTGGAACGCGGGAACACTTCCGTGAGTTTTATGATGAACCCCTTAAACATGGTCAGAGGTCAACCGCTCCTGATAGATTTGTCCAAATTGCTAATAAGAGAAAACAACACCTTGTATCAGTTCTTAATAAATATATGTTGAGAAGGACAAAGGAAGAGACCATAGGGCATCTTATGATGGGGAAGGAAGATAACATTGTTTTTTGTGCAATGAGTGATTTGCAAAAACGCATTTATAGGAGAATGATCCAGCTTCCTGACATTCAGTGCCTTATAAACAAGGACCTACCTTGTAGTTGTGGTAGCCCTCTCACTCAAGTTGAATGTTGCAAAAGGACTGTACCAGATGGAGCTATTTGGCCTTACCTTCACAAAGATAACCTCGATGATGGATGTGATTCATGCCCCTATTGTATTGTCCTTCCATGCCTTGTCAAGCTACAACAGATAAGCAATCACCTTGAGCTGATTAAGCCAAACCCCAAAGATGACCCTGACAAACAAGTTAAAGATGCAAAGTTTGCTGCTGCTGTCTATGGCCCAGACATTGACTTAGTTGGTGGGAGCATGCAGAATGAGAGTTTCCTGGGTCTAAGTGATGCAGAACATTGTGGCAAAATGCGAGCACTTGAAAAGCTGTTGTTGTCATGGTTTTCACATGGCGACAAAGTTCTTTTGTTTAGCTATTCTGTAAGGATGCTGGACATACTGGAGAAATTTATCATAAGAAAAGGCTACTGCTTCTCAAGACTTGATGGGTCCACTCCAACTAATTTACGCCAGTCTCTGGTTGATGATTTCAACTCTAGTCCAAGCAAACAAGTGTTCCTGATATCAACTCGTGCTGGTGGGCTCGGATTGAACCTTGTCAGTGCAAACCGTGTCGTAATATTTGATCCCAACTGGAATCCCTCACAAGACTTACAGGCTCAGGACAGGTCCTTTCGATATGGACAGAAACGGCATGTTGTGGTATTCCGTCTTCTCTCAGCTGGTTCACTTGAAGAACTAGTTTATTCTCGTCAGGTGTACAAGCAGCAGCTCTCAAACATTGCTGTCTCTGGGAAGATGGAAAAACGATATTTTGAAGGTGTCCAGGATTGCAAAGCATTTCAAGGGGAGCTTTTTGGAATTTGCAATTTATTTCGAGATTTATCTGATAAACTATTTACCAGTGAGATCGTTGAATCGCATGAGACGAATAAAAAAGACGGGCTTAAAACAGAACAACAGAAAAAAATAAATATTTCAGAAGAAACAAGTTTGTTAGCATCAGAGTCGGAAACCAGGTCATGTTCTGAATCTGCGAGGGCTGCAAGTAAACCAGATATTGAATTTGAAGACGTCGGCATTGTCTACGCTCATCGCAATGAAGACATTGTCAACTCCCGACCAGTGATTCAAAGGCAGTTATCTACCAGCAGCACCCTTTCAAGCGATGGCGAAAGCGAGCCAAGCAGCACTTTAGTCCATGAAAGGAAGAAACCAGAATGTGTACCTAAAAAACAGAAAATTCCTTTGATTGATGAAAGGAAGAGAGCCCAATTTAGCCTCCTTGCAGAGTCTATGGGCATGGGAGAGCTTGCATTTAGCAAATGGTTACTATCAGCCACTTCAGTAGAGAGAGAAAAAGTGCTTATAGACTACAAGAAAAAGAAAAAGCTTAAAGGTTAA
Protein sequence

>Msa0648120

MSLQTLKELTLRHCSTQQSQSQSQPSSSQSLLRDFDSNFPINRKPPKSSLAHHLRLLEDPDDPPFQPRDFLSQHNHSQTQEQQVKLDKEEEEDEEEEEEEPEIKCVKFSSVTSSQIQFDHTGPFEPLLLSSDGELPLVQVPASINCRLLEHQRVGVKFLYDLYKNNKGGILGDDMGLGKTIQTIAFLAAIFGKEGDSILSETRVEKRDPVLIICPSSIIQNWESEFSKWSNFSVAIYHGANRDLIYDKLEANGVEVLITSFDTYRIHGSSSLSDIHWNTVIIDEAHRLKNEKSKLYKACLEIKTLRRYGLTGTVMQNKILELFNIFDLVAPGSLGTREHFREFYDEPLKHGQRSTAPDRFVQIANKRKQHLVSVLNKYMLRRTKEETIGHLMMGKEDNIVFCAMSDLQKRIYRRMIQLPDIQCLINKDLPCSCGSPLTQVECCKRTVPDGAIWPYLHKDNLDDGCDSCPYCIVLPCLVKLQQISNHLELIKPNPKDDPDKQVKDAKFAAAVYGPDIDLVGGSMQNESFLGLSDAEHCGKMRALEKLLLSWFSHGDKVLLFSYSVRMLDILEKFIIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPSQDLQAQDRSFRYGQKRHVVVFRLLSAGSLEELVYSRQVYKQQLSNIAVSGKMEKRYFEGVQDCKAFQGELFGICNLFRDLSDKLFTSEIVESHETNKKDGLKTEQQKKINISEETSLLASESETRSCSESARAASKPDIEFEDVGIVYAHRNEDIVNSRPVIQRQLSTSSTLSSDGESEPSSTLVHERKKPECVPKKQKIPLIDERKRAQFSLLAESMGMGELAFSKWLLSATSVEREKVLIDYKKKKKLKG*