AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0555520


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0555520 MtrunA17_Chr4g0041581 95.175 456 22 0 1 456 1 456 0.0 881
Msa0555520 MtrunA17_Chr7g0231671 55.677 458 192 6 5 452 1 457 2.80e-156 452
Msa0555520 MtrunA17_Chr5g0416781 56.987 458 186 6 5 452 1 457 5.04e-156 451
Msa0555520 MtrunA17_Chr4g0041631 47.269 476 223 8 1 456 1 468 1.38e-127 379
Msa0555520 MtrunA17_Chr3g0096461 47.872 470 230 6 1 456 1 469 1.87e-127 378
Msa0555520 MtrunA17_Chr4g0041601 45.416 469 231 8 1 449 1 464 1.64e-117 353
Msa0555520 MtrunA17_Chr7g0222761 47.568 370 183 7 1 361 1 368 1.73e-89 277
Msa0555520 MtrunA17_Chr7g0222771 50.621 322 147 6 1 312 1 320 2.64e-89 275
Msa0555520 MtrunA17_Chr2g0326831 43.255 467 223 16 21 449 67 529 5.66e-88 278
Msa0555520 MtrunA17_Chr7g0231691 44.216 389 206 5 74 452 47 434 5.43e-87 272
Msa0555520 MtrunA17_Chr4g0041661 49.528 212 104 2 240 449 3 213 1.37e-53 178
Msa0555520 MtrunA17_Chr4g0073451 57.233 159 66 1 292 448 1 159 1.26e-51 171
Msa0555520 MtrunA17_Chr4g0041681 37.179 312 175 9 13 316 7 305 1.99e-41 150
Msa0555520 MtrunA17_Chr5g0394131 28.633 461 267 12 9 419 3 451 1.12e-33 132
Msa0555520 MtrunA17_Chr5g0416761 43.333 150 82 1 306 452 1 150 7.26e-29 110
Msa0555520 MtrunA17_Chr2g0313941 26.087 437 307 11 15 442 5 434 2.43e-28 116
Msa0555520 MtrunA17_Chr5g0435741 28.605 423 276 14 6 420 17 421 3.15e-28 116
Msa0555520 MtrunA17_Chr5g0416751 68.056 72 23 0 1 72 1 72 4.45e-28 106
Msa0555520 MtrunA17_Chr8g0362021 28.670 436 258 17 14 419 11 423 2.14e-25 108
Msa0555520 MtrunA17_Chr4g0023311 23.887 494 294 17 23 446 32 513 4.75e-25 107
Msa0555520 MtrunA17_Chr5g0438191 27.047 403 269 11 23 420 13 395 1.05e-22 100
Msa0555520 MtrunA17_Chr4g0041671 59.722 72 29 0 5 76 1 72 1.39e-22 92.0
Msa0555520 MtrunA17_Chr1g0191321 40.972 144 82 1 73 213 23 166 3.30e-22 93.6
Msa0555520 MtrunA17_Chr2g0277281 25.942 451 239 20 13 433 1 386 4.83e-22 97.8
Msa0555520 MtrunA17_Chr2g0278121 24.711 433 236 14 23 420 16 393 2.22e-21 95.9
Msa0555520 MtrunA17_Chr7g0259181 27.336 428 281 15 12 421 19 434 3.74e-21 95.9
Msa0555520 MtrunA17_Chr2g0319411 26.420 352 233 12 22 356 21 363 1.32e-18 87.4
Msa0555520 MtrunA17_Chr7g0262091 25.571 438 232 17 7 425 2 364 1.99e-18 87.0
Msa0555520 MtrunA17_Chr7g0224001 25.455 440 228 14 23 435 14 380 5.98e-18 85.5
Msa0555520 MtrunA17_Chr7g0255101 26.267 434 223 20 17 430 104 460 7.45e-18 85.9
Msa0555520 MtrunA17_Chr6g0458601 24.221 417 238 13 20 424 61 411 8.89e-18 85.5
Msa0555520 MtrunA17_Chr6g0457681 24.934 377 224 12 12 353 44 396 1.83e-17 84.3
Msa0555520 MtrunA17_Chr8g0362521 26.478 423 273 16 21 419 13 421 2.42e-17 84.0
Msa0555520 MtrunA17_Chr5g0438051 23.210 461 247 15 22 446 5 394 4.99e-17 82.8
Msa0555520 MtrunA17_Chr2g0314171 24.508 457 304 14 11 445 31 468 5.43e-17 83.2
Msa0555520 MtrunA17_Chr3g0138571 25.532 423 232 16 22 430 12 365 2.12e-16 80.9
Msa0555520 MtrunA17_Chr6g0458501 26.683 416 217 14 19 422 39 378 2.40e-16 80.9
Msa0555520 MtrunA17_Chr3g0137701 24.344 419 232 13 23 419 9 364 2.47e-16 80.5
Msa0555520 MtrunA17_Chr5g0431711 23.419 427 245 13 23 439 11 365 3.22e-16 80.1
Msa0555520 MtrunA17_Chr3g0138371 23.529 425 243 13 17 430 14 367 8.14e-16 79.0
Msa0555520 MtrunA17_Chr1g0197661 29.918 244 158 5 15 250 11 249 9.80e-16 79.0
Msa0555520 MtrunA17_Chr8g0366411 28.354 328 218 9 16 335 73 391 1.09e-15 79.0
Msa0555520 MtrunA17_Chr8g0360071 26.591 440 271 16 14 420 4 424 1.70e-15 78.6
Msa0555520 MtrunA17_Chr4g0073461 55.738 61 24 1 1 61 1 58 6.85e-15 69.3
Msa0555520 MtrunA17_Chr7g0236211 24.419 430 235 15 20 430 9 367 1.20e-14 75.5
Msa0555520 MtrunA17_Chr2g0325431 25.926 432 251 17 23 424 19 411 2.50e-14 74.7
Msa0555520 MtrunA17_Chr7g0262121 25.290 431 234 17 5 419 2 360 4.13e-14 73.9
Msa0555520 MtrunA17_Chr6g0486911 27.964 329 213 12 22 338 21 337 7.00e-14 73.2
Msa0555520 MtrunA17_Chr0c03g0490011 24.641 418 265 14 23 424 8 391 7.58e-14 73.2
Msa0555520 MtrunA17_Chr3g0085941 27.554 323 199 12 12 314 2 309 7.84e-14 72.8
Msa0555520 MtrunA17_Chr3g0137681 30.882 204 104 7 20 202 7 194 1.27e-13 72.4
Msa0555520 MtrunA17_Chr5g0415991 30.631 222 140 9 14 226 6 222 1.74e-13 72.0
Msa0555520 MtrunA17_Chr1g0164901 28.611 360 219 16 23 360 9 352 2.52e-13 71.2
Msa0555520 MtrunA17_Chr2g0326701 38.333 180 80 9 195 363 17 176 2.74e-13 68.2
Msa0555520 MtrunA17_Chr2g0303191 25.420 417 259 15 23 417 7 393 2.96e-13 71.2
Msa0555520 MtrunA17_Chr4g0025351 26.134 463 278 20 1 420 1 442 7.70e-13 70.5
Msa0555520 MtrunA17_Chr3g0085961 27.348 362 233 12 12 357 2 349 1.12e-12 69.3
Msa0555520 MtrunA17_Chr1g0148651 28.505 214 126 6 18 226 2 193 1.15e-12 70.1
Msa0555520 MtrunA17_Chr1g0148661 29.870 231 140 8 23 239 18 240 1.20e-12 68.2
Msa0555520 MtrunA17_Chr3g0082451 25.000 368 239 16 13 360 1 351 1.30e-12 68.9
Msa0555520 MtrunA17_Chr3g0082431 25.203 369 238 17 13 360 1 352 2.27e-12 68.2
Msa0555520 MtrunA17_Chr5g0444311 26.124 467 277 19 20 444 16 456 3.22e-12 68.2
Msa0555520 MtrunA17_Chr6g0460041 24.303 251 180 6 13 259 31 275 4.11e-12 67.0
Msa0555520 MtrunA17_Chr5g0421501 31.034 203 123 8 14 205 6 202 4.97e-12 67.4
Msa0555520 MtrunA17_Chr3g0139601 29.834 181 124 3 22 202 12 189 5.54e-12 67.8
Msa0555520 MtrunA17_Chr3g0091171 28.497 193 115 5 23 202 5 187 6.72e-12 66.6
Msa0555520 MtrunA17_Chr4g0049031 23.353 501 293 22 8 444 14 487 9.18e-12 67.0
Msa0555520 MtrunA17_Chr8g0362491 25.325 462 290 22 22 452 24 461 1.19e-11 66.6
Msa0555520 MtrunA17_Chr3g0091161 26.822 343 214 12 14 339 6 328 1.76e-11 65.9
Msa0555520 MtrunA17_Chr1g0154461 30.263 228 132 10 23 232 28 246 1.98e-11 65.9
Msa0555520 MtrunA17_Chr5g0419301 25.215 349 205 13 19 338 26 347 2.14e-11 65.5
Msa0555520 MtrunA17_Chr8g0342451 27.308 260 152 9 22 255 35 283 2.38e-11 65.5
Msa0555520 MtrunA17_Chr2g0319401 26.667 240 146 9 9 231 15 241 2.99e-11 64.7
Msa0555520 MtrunA17_Chr4g0027441 24.194 434 291 17 20 431 6 423 3.02e-11 65.1
Msa0555520 MtrunA17_Chr4g0027431 23.380 432 291 16 23 431 9 423 5.86e-11 64.3
Msa0555520 MtrunA17_Chr1g0197671 30.357 168 105 4 22 183 20 181 6.71e-11 62.0
Msa0555520 MtrunA17_Chr3g0091201 26.452 310 196 10 22 314 29 323 6.89e-11 63.5
Msa0555520 MtrunA17_Chr5g0422791 33.621 116 71 4 324 434 78 192 8.90e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0555520 AT4G14096.2 28.758 459 282 17 22 451 7 449 3.58e-34 134
Msa0555520 AT4G14096.1 28.758 459 282 17 22 451 7 449 3.58e-34 134
Msa0555520 AT3G59210.2 29.806 463 264 17 22 442 6 449 1.77e-31 126
Msa0555520 AT3G59210.1 29.806 463 264 17 22 442 6 449 1.77e-31 126
Msa0555520 AT3G59210.5 29.806 463 264 17 22 442 6 449 1.77e-31 126
Msa0555520 AT3G59210.4 29.806 463 264 17 22 442 6 449 1.77e-31 126
Msa0555520 AT3G59210.3 29.806 463 264 17 22 442 6 449 1.77e-31 126
Msa0555520 AT3G58880.1 29.195 435 256 17 21 420 1 418 2.24e-31 125
Msa0555520 AT5G53840.1 29.398 432 280 14 19 442 14 428 3.13e-31 125
Msa0555520 AT3G58860.1 29.047 451 287 15 23 452 7 445 9.68e-31 124
Msa0555520 AT4G14103.3 29.609 358 227 12 22 362 7 356 1.20e-29 119
Msa0555520 AT4G14103.1 29.609 358 227 12 22 362 7 356 1.20e-29 119
Msa0555520 AT4G14103.2 27.494 451 273 17 22 451 7 424 1.78e-29 120
Msa0555520 AT1G51370.1 28.604 437 253 17 17 430 13 413 3.12e-29 119
Msa0555520 AT1G78840.1 29.412 425 248 15 22 419 4 403 7.20e-29 118
Msa0555520 AT1G78840.2 29.412 425 248 15 22 419 4 403 7.20e-29 118
Msa0555520 AT3G58900.4 29.120 443 249 18 23 420 2 424 3.63e-28 116
Msa0555520 AT5G44950.1 26.492 419 271 11 22 419 3 405 7.56e-28 115
Msa0555520 AT4G13965.1 26.606 436 282 15 23 447 10 418 5.63e-27 112
Msa0555520 AT3G59240.1 27.477 444 282 15 22 434 7 441 1.41e-26 112
Msa0555520 AT1G66290.1 26.128 421 287 13 19 429 25 431 1.58e-26 112
Msa0555520 AT3G03030.1 27.126 435 280 13 23 424 2 432 7.42e-26 110
Msa0555520 AT1G32375.2 27.229 415 258 15 23 419 2 390 1.43e-25 108
Msa0555520 AT1G32375.1 27.229 415 258 15 23 419 2 390 1.43e-25 108
Msa0555520 AT1G16930.2 24.941 421 280 12 23 419 15 423 5.70e-25 107
Msa0555520 AT1G16930.1 24.941 421 280 12 23 419 15 423 5.70e-25 107
Msa0555520 AT1G16930.3 24.941 421 280 12 23 419 15 423 5.70e-25 107
Msa0555520 AT5G53635.1 29.187 418 259 13 24 419 1 403 5.75e-25 107
Msa0555520 AT1G66300.1 25.176 425 290 13 23 434 29 438 5.79e-25 107
Msa0555520 AT3G59230.1 26.834 477 294 20 14 447 4 468 5.99e-25 107
Msa0555520 AT3G50710.1 26.622 447 276 15 23 446 2 419 1.30e-24 105
Msa0555520 AT4G22280.1 28.507 442 274 16 23 452 2 413 1.38e-24 105
Msa0555520 AT3G59170.1 29.581 453 249 19 22 420 6 442 1.41e-24 106
Msa0555520 AT2G42730.1 26.824 425 278 13 20 419 2 418 1.90e-24 105
Msa0555520 AT1G51370.3 28.753 393 224 15 17 387 13 371 2.10e-24 105
Msa0555520 AT1G13780.1 25.107 466 293 19 23 452 10 455 2.72e-24 105
Msa0555520 AT1G55030.1 25.180 417 262 15 16 415 2 385 3.37e-24 104
Msa0555520 AT5G22720.1 27.483 433 253 15 22 417 22 430 3.61e-24 105
Msa0555520 AT1G55030.2 25.180 417 262 15 16 415 12 395 4.23e-24 104
Msa0555520 AT5G56420.1 25.185 405 276 11 22 419 5 389 5.11e-24 104
Msa0555520 AT5G56420.2 25.185 405 276 11 22 419 5 389 5.11e-24 104
Msa0555520 AT5G56420.3 25.185 405 276 11 22 419 5 389 5.11e-24 104
Msa0555520 AT1G51370.2 29.041 365 209 13 17 365 13 343 8.53e-24 102
Msa0555520 AT4G22280.2 31.143 350 208 12 23 360 2 330 1.17e-23 101
Msa0555520 AT5G38590.2 26.126 444 274 16 23 447 2 410 1.29e-23 102
Msa0555520 AT3G59200.1 26.539 471 267 18 22 435 6 454 1.46e-23 103
Msa0555520 AT1G58310.1 28.756 386 226 13 17 362 2 378 2.36e-23 103
Msa0555520 AT5G25860.1 26.588 425 266 13 22 419 11 416 2.91e-23 102
Msa0555520 AT1G78750.2 25.112 446 312 13 23 451 18 458 4.70e-23 101
Msa0555520 AT1G78750.1 25.112 446 312 13 23 451 18 458 4.70e-23 101
Msa0555520 AT3G58980.1 28.027 446 265 18 23 432 2 427 9.45e-23 101
Msa0555520 AT5G22670.1 26.699 412 277 11 22 419 10 410 2.10e-22 99.8
Msa0555520 AT2G29930.3 27.397 438 266 20 14 419 4 421 3.20e-22 99.4
Msa0555520 AT2G29930.1 27.397 438 266 20 14 419 4 421 3.20e-22 99.4
Msa0555520 AT3G59200.2 27.174 368 225 12 22 358 6 361 8.61e-22 97.1
Msa0555520 AT3G03040.1 26.437 435 270 15 23 420 2 423 8.64e-22 98.2
Msa0555520 AT5G41840.1 30.052 386 221 18 18 362 9 386 1.15e-21 98.2
Msa0555520 AT3G44060.1 24.368 435 306 11 28 452 4 425 1.21e-21 97.4
Msa0555520 AT5G44980.2 24.130 431 293 13 22 432 3 419 1.43e-21 97.1
Msa0555520 AT5G44980.1 24.130 431 293 13 22 432 3 419 1.43e-21 97.1
Msa0555520 AT5G22730.1 24.038 416 292 9 22 420 27 435 1.55e-21 97.4
Msa0555520 AT5G22730.3 24.038 416 292 9 22 420 27 435 1.55e-21 97.4
Msa0555520 AT3G59000.1 26.941 438 266 15 23 420 2 425 1.80e-21 97.4
Msa0555520 AT1G06630.5 28.531 354 225 12 22 360 11 351 1.89e-21 95.9
Msa0555520 AT1G06630.8 28.531 354 225 12 22 360 11 351 1.89e-21 95.9
Msa0555520 AT5G56400.1 24.943 441 300 10 23 452 33 453 3.39e-21 96.3
Msa0555520 AT3G58960.1 26.327 452 263 18 23 420 2 437 3.61e-21 96.3
Msa0555520 AT4G10400.2 26.790 433 269 15 23 441 2 400 3.64e-21 95.5
Msa0555520 AT4G10400.3 26.790 433 269 15 23 441 2 400 3.64e-21 95.5
Msa0555520 AT4G10400.1 26.790 433 269 15 23 441 2 400 3.64e-21 95.5
Msa0555520 AT3G49030.1 25.056 443 285 19 22 446 20 433 3.98e-21 95.9
Msa0555520 AT3G59160.1 28.389 391 221 14 22 362 12 393 4.23e-21 95.9
Msa0555520 AT5G27750.1 22.467 454 305 14 23 442 5 445 4.34e-21 95.9
Msa0555520 AT5G56440.1 26.812 414 268 11 23 419 2 397 4.52e-21 95.5
Msa0555520 AT5G22660.2 26.812 414 276 10 22 419 12 414 5.35e-21 95.5
Msa0555520 AT1G06630.2 28.531 354 225 12 22 360 11 351 5.56e-21 95.1
Msa0555520 AT1G06630.6 28.531 354 225 12 22 360 11 351 5.56e-21 95.1
Msa0555520 AT1G06630.4 28.531 354 225 12 22 360 11 351 5.56e-21 95.1
Msa0555520 AT1G06630.3 28.531 354 225 12 22 360 11 351 5.56e-21 95.1
Msa0555520 AT1G06630.9 28.531 354 225 12 22 360 20 360 5.68e-21 95.1
Msa0555520 AT3G59250.1 27.952 415 250 14 22 420 6 387 6.68e-21 95.1
Msa0555520 AT3G26922.1 27.652 264 180 6 15 273 6 263 9.47e-21 92.8
Msa0555520 AT3G26922.2 27.652 264 180 6 15 273 6 263 9.47e-21 92.8
Msa0555520 AT3G60040.5 25.785 446 289 15 22 444 229 655 9.68e-21 95.9
Msa0555520 AT3G28410.1 25.069 363 234 14 12 361 19 356 9.75e-21 94.7
Msa0555520 AT3G60040.1 25.785 446 289 15 22 444 231 657 9.89e-21 95.9
Msa0555520 AT3G60040.4 25.785 446 289 15 22 444 12 438 9.92e-21 95.5
Msa0555520 AT3G60040.2 25.785 446 289 15 22 444 231 657 1.01e-20 95.5
Msa0555520 AT1G69630.1 25.059 427 289 13 11 419 6 419 1.01e-20 94.7
Msa0555520 AT3G60040.3 25.785 446 289 15 22 444 232 658 1.04e-20 95.9
Msa0555520 AT4G00315.1 30.962 239 147 7 23 253 2 230 1.08e-20 94.7
Msa0555520 AT3G59190.2 27.518 407 249 15 22 400 11 399 1.36e-20 94.7
Msa0555520 AT1G06630.1 28.531 354 225 12 22 360 11 351 1.44e-20 94.4
Msa0555520 AT1G66320.1 24.828 435 296 14 17 435 23 442 1.86e-20 94.0
Msa0555520 AT1G66310.1 26.128 421 283 14 12 419 8 413 3.20e-20 93.2
Msa0555520 AT5G38590.1 31.754 211 134 5 23 228 2 207 6.06e-20 90.1
Msa0555520 AT5G56390.1 27.098 417 243 18 41 430 21 403 1.16e-19 91.3
Msa0555520 AT3G59190.1 28.493 365 225 14 22 358 11 367 1.21e-19 90.9
Msa0555520 AT1G55660.1 26.340 429 274 15 18 420 48 460 1.78e-19 91.3
Msa0555520 AT2G26030.3 24.228 421 275 17 23 417 4 406 2.31e-19 90.5
Msa0555520 AT2G26030.1 24.228 421 275 17 23 417 4 406 2.31e-19 90.5
Msa0555520 AT5G50270.1 27.251 422 253 16 23 419 2 394 2.83e-19 90.1
Msa0555520 AT5G56380.2 25.792 442 291 16 23 444 2 426 4.20e-19 89.7
Msa0555520 AT5G56380.1 25.792 442 291 16 23 444 2 426 4.20e-19 89.7
Msa0555520 AT5G02930.1 26.479 355 228 14 23 361 28 365 4.59e-19 89.7
Msa0555520 AT4G00160.1 25.676 444 287 14 22 446 15 434 4.68e-19 89.7
Msa0555520 AT5G18780.2 26.540 422 277 12 13 417 1 406 5.40e-19 89.4
Msa0555520 AT5G18780.1 26.540 422 277 12 13 417 1 406 5.40e-19 89.4
Msa0555520 AT3G58900.3 29.664 327 181 14 23 314 2 314 5.91e-19 87.8
Msa0555520 AT4G13985.1 25.000 428 297 9 19 428 15 436 6.83e-19 89.4
Msa0555520 AT3G62440.1 25.164 457 293 14 23 441 2 447 9.05e-19 89.0
Msa0555520 AT2G26030.4 23.934 422 280 17 23 417 4 411 1.01e-18 88.6
Msa0555520 AT3G58900.2 29.538 325 180 14 23 312 2 312 1.71e-18 86.7
Msa0555520 AT3G58900.1 29.538 325 180 14 23 312 2 312 1.71e-18 86.7
Msa0555520 AT3G52680.1 26.484 438 278 17 22 442 20 430 1.89e-18 87.8
Msa0555520 AT3G58930.3 25.792 442 275 15 23 420 2 434 1.99e-18 88.2
Msa0555520 AT3G58930.1 25.792 442 275 15 23 420 2 434 1.99e-18 88.2
Msa0555520 AT3G58930.5 25.792 442 275 15 23 420 2 434 1.99e-18 88.2
Msa0555520 AT5G02700.1 25.698 358 233 14 11 358 17 351 2.10e-18 87.8
Msa0555520 AT3G58920.1 25.615 488 288 20 23 454 2 470 2.48e-18 87.8
Msa0555520 AT5G56810.1 25.164 457 292 15 15 451 5 431 2.56e-18 87.4
Msa0555520 AT5G44960.1 22.803 421 261 12 23 419 5 385 4.93e-18 86.3
Msa0555520 AT4G10420.1 27.181 298 176 12 135 419 22 291 5.67e-18 85.1
Msa0555520 AT4G13960.2 26.107 429 272 14 23 420 2 416 6.27e-18 86.3
Msa0555520 AT4G13960.1 26.107 429 272 14 23 420 2 416 6.27e-18 86.3
Msa0555520 AT1G78760.1 22.892 415 285 11 22 419 15 411 9.42e-18 85.9
Msa0555520 AT1G55660.2 30.415 217 141 6 18 226 48 262 1.16e-17 84.7
Msa0555520 AT5G38396.1 24.773 440 277 16 23 423 2 426 1.62e-17 85.1
Msa0555520 AT2G42720.1 25.225 444 266 16 23 426 2 419 2.24e-17 84.7
Msa0555520 AT5G41830.2 25.558 403 242 16 22 384 12 396 2.32e-17 84.7
Msa0555520 AT5G35995.2 26.526 475 280 20 22 452 4 453 2.35e-17 84.7
Msa0555520 AT5G35995.1 26.526 475 280 20 22 452 4 453 2.35e-17 84.7
Msa0555520 AT3G62430.1 27.460 437 275 15 23 435 2 420 7.01e-17 83.2
Msa0555520 AT5G56370.1 26.173 405 247 16 23 410 2 371 7.32e-17 82.8
Msa0555520 AT5G56370.2 26.173 405 247 16 23 410 2 371 7.32e-17 82.8
Msa0555520 AT1G60400.1 26.488 336 210 12 17 334 8 324 8.17e-17 82.4
Msa0555520 AT4G15060.2 28.032 371 210 16 17 342 18 376 9.02e-17 82.8
Msa0555520 AT1G78730.1 22.356 416 255 12 23 419 22 388 1.14e-16 82.4
Msa0555520 AT4G26340.1 24.658 438 279 16 23 443 2 405 1.22e-16 82.0
Msa0555520 AT4G27050.2 27.200 375 217 17 23 362 4 357 1.23e-16 82.4
Msa0555520 AT4G27050.3 27.200 375 217 17 23 362 4 357 1.23e-16 82.4
Msa0555520 AT4G27050.5 27.200 375 217 17 23 362 4 357 1.23e-16 82.4
Msa0555520 AT4G27050.4 27.200 375 217 17 23 362 4 357 1.23e-16 82.4
Msa0555520 AT4G27050.1 27.200 375 217 17 23 362 4 357 1.23e-16 82.4
Msa0555520 AT3G26930.2 25.362 414 267 14 22 417 20 409 1.27e-16 82.4
Msa0555520 AT5G56410.1 25.653 421 258 16 32 419 12 410 1.52e-16 82.4
Msa0555520 AT5G56810.2 26.568 271 179 7 15 273 5 267 1.86e-16 80.5
Msa0555520 AT4G00320.1 26.804 388 228 17 22 370 12 382 1.93e-16 82.0
Msa0555520 AT2G04230.1 24.888 446 288 15 22 444 12 433 1.94e-16 81.6
Msa0555520 AT5G60610.2 25.182 413 265 16 23 419 2 386 2.47e-16 80.9
Msa0555520 AT5G60610.1 25.182 413 265 16 23 419 2 386 2.47e-16 80.9
Msa0555520 AT3G58940.1 26.047 430 256 17 23 419 2 402 2.80e-16 81.6
Msa0555520 AT3G58940.2 26.047 430 256 17 23 419 2 402 2.80e-16 81.6
Msa0555520 AT3G52680.2 27.143 350 217 13 22 360 20 342 4.51e-16 80.1
Msa0555520 AT2G26860.1 24.228 421 269 14 23 419 2 396 4.99e-16 80.1
Msa0555520 AT2G26860.2 24.228 421 269 14 23 419 2 396 4.99e-16 80.1
Msa0555520 AT3G59150.1 27.021 433 276 12 23 420 13 440 5.36e-16 80.5
Msa0555520 AT5G56690.1 24.688 401 256 16 25 402 4 381 1.21e-15 79.0
Msa0555520 AT1G13780.2 27.076 277 170 12 23 277 10 276 1.22e-15 78.2
Msa0555520 AT4G09920.2 30.233 215 134 6 23 228 2 209 1.27e-15 77.8
Msa0555520 AT4G09920.4 30.233 215 134 6 23 228 2 209 1.27e-15 77.8
Msa0555520 AT4G09920.3 30.233 215 134 6 23 228 2 209 1.27e-15 77.8
Msa0555520 AT1G06630.7 27.715 267 173 9 22 275 11 270 1.32e-15 77.8
Msa0555520 AT3G44810.1 27.532 316 209 8 28 330 12 320 1.60e-15 79.0
Msa0555520 AT5G27750.2 22.343 367 241 12 23 356 5 360 1.70e-15 78.2
Msa0555520 AT3G49030.2 23.649 444 264 19 22 446 20 407 1.91e-15 78.6
Msa0555520 AT1G52650.1 24.709 429 279 13 23 420 2 417 2.16e-15 78.6
Msa0555520 AT5G56370.3 26.648 349 210 13 23 360 2 315 2.16e-15 77.4
Msa0555520 AT5G38390.1 24.130 431 273 14 23 420 2 411 2.57e-15 78.2
Msa0555520 AT3G58930.4 25.935 428 258 13 23 420 2 400 2.90e-15 78.2
Msa0555520 AT3G58930.2 25.935 428 258 13 23 420 2 400 2.90e-15 78.2
Msa0555520 AT3G49480.2 25.112 446 287 13 10 431 1 423 3.05e-15 78.2
Msa0555520 AT4G09920.1 30.233 215 134 6 23 228 2 209 3.33e-15 76.6
Msa0555520 AT4G09920.5 30.233 215 134 6 23 228 2 209 3.33e-15 76.6
Msa0555520 AT3G03030.2 25.868 317 218 8 23 323 2 317 4.12e-15 76.6
Msa0555520 AT3G59180.1 25.789 380 225 15 109 442 66 434 4.22e-15 77.8
Msa0555520 AT5G56820.1 22.146 438 293 12 23 446 15 418 6.60e-15 77.0
Msa0555520 AT3G51530.1 25.576 434 286 17 22 442 29 438 1.15e-14 76.3
Msa0555520 AT2G29910.5 28.302 265 167 9 22 275 4 256 1.35e-14 75.5
Msa0555520 AT2G29910.7 28.302 265 167 9 22 275 4 256 1.35e-14 75.5
Msa0555520 AT2G29910.4 28.302 265 167 9 22 275 4 256 1.35e-14 75.5
Msa0555520 AT2G29910.1 28.302 265 167 9 22 275 4 256 1.35e-14 75.5
Msa0555520 AT2G29910.3 28.679 265 166 10 22 275 4 256 1.39e-14 75.1
Msa0555520 AT2G29910.2 28.679 265 166 10 22 275 4 256 1.39e-14 75.1
Msa0555520 AT2G29910.6 28.679 265 166 10 22 275 28 280 1.74e-14 75.1
Msa0555520 AT5G02920.1 30.693 202 121 7 11 207 16 203 1.89e-14 73.6
Msa0555520 AT5G62970.1 25.277 451 266 17 36 441 16 440 2.30e-14 75.5
Msa0555520 AT1G80470.1 25.714 385 243 15 23 387 15 376 3.30e-14 75.1
Msa0555520 AT3G49040.1 25.379 264 173 10 22 273 16 267 6.58e-14 72.8
Msa0555520 AT4G03220.1 23.125 480 300 17 23 446 24 490 8.31e-14 73.9
Msa0555520 AT3G26922.3 25.105 239 168 6 40 273 2 234 8.36e-14 72.0
Msa0555520 AT3G26922.5 25.105 239 168 6 40 273 2 234 8.36e-14 72.0
Msa0555520 AT3G54160.1 27.344 384 218 19 84 432 48 405 9.80e-14 73.2
Msa0555520 AT5G22700.5 24.700 417 291 11 14 416 34 441 1.43e-13 73.2
Msa0555520 AT1G16940.1 25.888 197 129 5 23 213 11 196 1.48e-13 72.8
Msa0555520 AT3G42770.1 25.060 415 270 16 28 423 4 396 1.77e-13 72.8
Msa0555520 AT5G22660.1 26.718 262 183 4 22 277 12 270 2.65e-13 71.2
Msa0555520 AT2G29930.2 27.124 306 180 15 145 419 8 301 2.72e-13 71.2
Msa0555520 AT5G44490.2 23.598 428 295 12 22 429 16 431 2.76e-13 72.0
Msa0555520 AT5G22610.2 23.973 438 270 18 21 417 16 431 3.01e-13 72.0
Msa0555520 AT5G44490.1 23.598 428 295 12 22 429 16 431 3.08e-13 72.0
Msa0555520 AT3G49020.1 23.725 451 293 15 13 443 12 431 3.25e-13 71.6
Msa0555520 AT3G49150.1 26.004 473 272 22 22 446 15 457 4.47e-13 71.2
Msa0555520 AT5G44970.1 24.422 303 206 9 130 418 58 351 6.91e-13 70.5
Msa0555520 AT5G41630.1 27.401 354 216 16 17 336 6 352 7.84e-13 70.5
Msa0555520 AT1G21990.1 25.936 374 226 13 22 362 8 363 7.99e-13 70.5
Msa0555520 AT3G26930.1 23.773 387 253 14 49 417 2 364 9.81e-13 70.1
Msa0555520 AT5G18780.3 24.793 363 242 10 13 360 1 347 1.19e-12 69.7
Msa0555520 AT5G18780.4 24.793 363 242 10 13 360 1 347 1.19e-12 69.7
Msa0555520 AT5G22700.2 25.000 408 283 11 23 416 6 404 1.29e-12 69.7
Msa0555520 AT5G22700.3 25.000 408 283 11 23 416 6 404 1.29e-12 69.7
Msa0555520 AT5G22700.1 25.000 408 283 11 23 416 6 404 1.29e-12 69.7
Msa0555520 AT5G22700.4 25.000 408 283 11 23 416 6 404 1.29e-12 69.7
Msa0555520 AT5G22610.1 24.065 428 252 17 21 417 16 401 1.34e-12 70.1
Msa0555520 AT4G15060.1 28.270 237 155 8 23 252 172 400 1.38e-12 70.1
Msa0555520 AT5G22730.2 23.164 354 248 9 22 358 27 373 1.61e-12 69.3
Msa0555520 AT5G02910.2 27.095 358 219 16 20 361 8 339 2.06e-12 68.6
Msa0555520 AT5G02910.3 27.095 358 219 16 20 361 8 339 3.29e-12 68.2
Msa0555520 AT5G02910.1 27.095 358 219 16 20 361 8 339 3.85e-12 68.6
Msa0555520 AT3G10750.1 33.540 161 86 7 50 202 2 149 3.93e-12 67.4
Msa0555520 AT1G13570.2 30.093 216 131 8 18 224 1 205 4.58e-12 67.0
Msa0555520 AT3G56780.2 23.899 477 288 17 25 446 9 465 5.83e-12 68.2
Msa0555520 AT3G26920.3 25.862 290 182 11 139 416 37 305 7.00e-12 67.0
Msa0555520 AT3G26920.1 25.862 290 182 11 139 416 37 305 7.00e-12 67.0
Msa0555520 AT1G13570.3 30.093 216 131 8 18 224 1 205 1.92e-11 66.2
Msa0555520 AT1G13570.1 30.093 216 131 8 18 224 1 205 1.92e-11 66.2
Msa0555520 AT1G80960.2 24.892 462 303 19 5 442 36 477 2.84e-11 65.9
Msa0555520 AT1G80960.4 24.892 462 303 19 5 442 36 477 2.84e-11 65.9
Msa0555520 AT1G80960.1 24.892 462 303 19 5 442 36 477 2.84e-11 65.9
Msa0555520 AT1G80960.3 24.070 457 289 19 5 442 36 453 3.05e-11 65.9
Msa0555520 AT5G44980.3 22.508 311 216 8 22 316 3 304 3.19e-11 64.7
Msa0555520 AT5G44980.4 22.508 311 216 8 22 316 3 304 3.19e-11 64.7
Msa0555520 AT5G56430.1 25.874 286 182 8 145 419 58 324 3.86e-11 64.7
Msa0555520 AT3G54910.3 24.742 291 180 8 140 419 80 342 5.63e-11 64.3
Msa0555520 AT3G54910.1 24.742 291 180 8 140 419 80 342 5.63e-11 64.3
Msa0555520 AT3G54910.2 24.742 291 180 8 140 419 80 342 5.63e-11 64.3
Msa0555520 AT1G80960.5 27.692 260 161 11 5 251 36 281 5.82e-11 64.7
Msa0555520 AT1G22000.1 32.222 180 115 4 25 203 31 204 6.40e-11 64.7
Msa0555520 AT1G66640.1 23.196 388 259 13 54 429 35 395 9.22e-11 63.9

Find 108 sgRNAs with CRISPR-Local

Find 181 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAGAATTTCTTGACATTTA+TGG 0.106011 4_1:-53569918 Msa0555520:CDS
CAACATGCAGTTCGTTATTT+TGG 0.131415 4_1:+53570726 None:intergenic
TCAAGAATAGATTTATATTA+TGG 0.147346 4_1:-53569254 Msa0555520:three_prime_UTR
ACTAAGTTGAATATAGTATT+TGG 0.196165 4_1:-53571112 Msa0555520:CDS
GACTCTCATTCATTCGTTAC+AGG 0.232211 4_1:+53572199 None:intergenic
GAAAATCAAAGACGGGTAAT+TGG 0.233443 4_1:+53571386 None:intergenic
TAGAATTTCTTGACATTTAT+GGG 0.257267 4_1:-53569917 Msa0555520:CDS
TATCACCCACATTATGTCTT+TGG 0.262830 4_1:+53571527 None:intergenic
AAACTTCACCAATCTGATTT+CGG 0.294077 4_1:+53569686 None:intergenic
GTTGATGCAAATATTGATCT+TGG 0.309181 4_1:-53570761 Msa0555520:CDS
TAGAAAATGTCACGTTCTTA+AGG 0.323129 4_1:-53569659 Msa0555520:CDS
TTTATTAACTTGTGCCTTAA+GGG 0.323279 4_1:+53569215 None:intergenic
ATGTCAAGAAATTCTAGTTT+AGG 0.324682 4_1:+53569924 None:intergenic
ATTTATTAACTTGTGCCTTA+AGG 0.325344 4_1:+53569214 None:intergenic
CCTGCATCAACAATAGTTAC+TGG 0.325742 4_1:+53571256 None:intergenic
ATCAATATTTGCATCAACTA+TGG 0.332138 4_1:+53570766 None:intergenic
CAAGAATAGATTTATATTAT+GGG 0.341428 4_1:-53569253 Msa0555520:three_prime_UTR
GCTATCAGATGAAACTATTC+AGG 0.345809 4_1:-53570651 Msa0555520:intron
ACTAGATCTACGAGGCAATC+TGG 0.360842 4_1:+53571331 None:intergenic
CCGGGATGCCGAGAAACTAT+TGG 0.361036 4_1:+53571141 None:intergenic
ATTCTAGTTTAGGACTCTTT+CGG 0.366674 4_1:+53569934 None:intergenic
TTAGGGATCTTACTTATCCT+TGG 0.372669 4_1:-53569799 Msa0555520:intron
ACAAGGAAACAATTTATAGT+TGG 0.386110 4_1:+53570800 None:intergenic
CAAGGAAACAATTTATAGTT+GGG 0.388932 4_1:+53570801 None:intergenic
GATAACTGGTTAAGTGTTGC+TGG 0.395387 4_1:-53569294 Msa0555520:three_prime_UTR
CTAGATCTACGAGGCAATCT+GGG 0.409674 4_1:+53571332 None:intergenic
TGCAGTTCAAACTCTGCGCC+TGG 0.412198 4_1:+53572146 None:intergenic
TGGTTAAGTGTTGCTGGAAA+TGG 0.418387 4_1:-53569288 Msa0555520:three_prime_UTR
AGGAACCAATTGCAAGCTTT+AGG 0.419691 4_1:-53569576 Msa0555520:CDS
CGGGATGCCGAGAAACTATT+GGG 0.428862 4_1:+53571142 None:intergenic
TTGATGCAAATATTGATCTT+GGG 0.429706 4_1:-53570760 Msa0555520:CDS
TTTCTGCCCTAGTCTCTGTA+TGG 0.432516 4_1:-53572226 Msa0555520:five_prime_UTR
AATGCTAACTTGTGCCCTTA+AGG 0.432529 4_1:-53569229 Msa0555520:three_prime_UTR
AAAATCAAAGACGGGTAATT+GGG 0.435838 4_1:+53571387 None:intergenic
CCATGCCTAAAGCTTGCAAT+TGG 0.438162 4_1:+53569571 None:intergenic
TGTGTTACCCAATAGTTTCT+CGG 0.443039 4_1:-53571149 Msa0555520:CDS
CCAGTAACTATTGTTGATGC+AGG 0.450089 4_1:-53571256 Msa0555520:CDS
AAATCTATTCTTGACACAAA+TGG 0.451283 4_1:+53569263 None:intergenic
ACCTAGAATCTGAAAATAGT+AGG 0.451440 4_1:-53571174 Msa0555520:CDS
AAAGATAATATCTTCAAGCT+AGG 0.454542 4_1:+53571055 None:intergenic
AGAAAATGTCACGTTCTTAA+GGG 0.467231 4_1:-53569658 Msa0555520:CDS
GGGGACTTAGAATTTCGCTT+TGG 0.474196 4_1:+53571352 None:intergenic
AATTCCAACATTGAAGAAGT+TGG 0.478445 4_1:-53570915 Msa0555520:CDS
TTGGTAGTGTCGAGTCTCTC+AGG 0.484028 4_1:-53570673 Msa0555520:CDS
TTCTCGTCTCTCTACGGAAG+AGG 0.486845 4_1:-53571455 Msa0555520:CDS
TTTAGATTCTTACAAATGCA+TGG 0.491961 4_1:+53569343 None:intergenic
ATGTCCAACTTCTTCAATGT+TGG 0.494500 4_1:+53570911 None:intergenic
GGTTGGATTTGTGAAGTAGT+TGG 0.497013 4_1:+53571305 None:intergenic
GGATCTTACTTATCCTTGGA+TGG 0.498856 4_1:-53569795 Msa0555520:CDS
TGCCCCACACTAAATCAAAC+AGG 0.498945 4_1:+53569436 None:intergenic
GTGCCTGTTTGATTTAGTGT+GGG 0.504671 4_1:-53569439 Msa0555520:three_prime_UTR
AAGGACAACTCTTGTAAGAC+AGG 0.508600 4_1:+53570977 None:intergenic
TTAGATTCTTACAAATGCAT+GGG 0.509984 4_1:+53569344 None:intergenic
TAAACTCCAAAGACATAATG+TGG 0.514913 4_1:-53571533 Msa0555520:CDS
TACCATCAGGTACAGAATCA+AGG 0.516438 4_1:+53571086 None:intergenic
TATTCAACTTAGTCAATGAC+CGG 0.518284 4_1:+53571122 None:intergenic
TTCCTTGATTCTGTACCTGA+TGG 0.531110 4_1:-53571088 Msa0555520:CDS
ATTGAGCTGTTCAGTCGTCT+TGG 0.533363 4_1:-53570692 Msa0555520:CDS
GGCTTCCCATACAGAGACTA+GGG 0.539629 4_1:+53572220 None:intergenic
CCAATAGTTTCTCGGCATCC+CGG 0.540751 4_1:-53571141 Msa0555520:CDS
CTATGGAGGTAGAGTTAACA+AGG 0.542514 4_1:+53570783 None:intergenic
AATATAATGAAGAATTCCCT+CGG 0.546133 4_1:+53571480 None:intergenic
CAATTGCAAGCTTTAGGCAT+GGG 0.547449 4_1:-53569570 Msa0555520:CDS
ACTTAAAGATGAAAGATTCA+CGG 0.550056 4_1:+53570835 None:intergenic
AAGATAATATCTTCAAGCTA+GGG 0.550299 4_1:+53571056 None:intergenic
AGCCGACTTCTCATTTGTGA+AGG 0.550930 4_1:+53571021 None:intergenic
GGAGATGAACATTTACTGTA+CGG 0.552497 4_1:-53569637 Msa0555520:CDS
TGTGCCTGTTTGATTTAGTG+TGG 0.555068 4_1:-53569440 Msa0555520:three_prime_UTR
AGATGAAGCCGAAATCAGAT+TGG 0.557556 4_1:-53569694 Msa0555520:CDS
AGATTGCCTCGTAGATCTAG+TGG 0.557880 4_1:-53571329 Msa0555520:CDS
CTAGGGAAACAGATACCATC+AGG 0.559011 4_1:+53571073 None:intergenic
AGAGAAGATTTGAAACAGCA+AGG 0.559103 4_1:+53569747 None:intergenic
TATTCTTTCTCGTCTCTCTA+CGG 0.559151 4_1:-53571461 Msa0555520:CDS
TTCTGCCCTAGTCTCTGTAT+GGG 0.559414 4_1:-53572225 Msa0555520:five_prime_UTR
TGCGTCAAATTCTTGAACGA+AGG 0.559936 4_1:+53570008 None:intergenic
AGTCTCGCTCTTCGCCTCAC+CGG 0.562200 4_1:-53572180 Msa0555520:five_prime_UTR
CTTCTATATTAGCAACAAAG+TGG 0.565241 4_1:-53571423 Msa0555520:CDS
AATTCTCGAAAATCAAAGAC+GGG 0.570247 4_1:+53571379 None:intergenic
GCAGTTCAAACTCTGCGCCT+GGG 0.571175 4_1:+53572147 None:intergenic
TATCCTTGGATGGTGAAGAC+TGG 0.573895 4_1:-53569785 Msa0555520:CDS
TGTCCAGTCTTCACCATCCA+AGG 0.574526 4_1:+53569782 None:intergenic
CCAATTGCAAGCTTTAGGCA+TGG 0.576197 4_1:-53569571 Msa0555520:CDS
TCTGCTAATACTTCACAACT+AGG 0.576306 4_1:+53569963 None:intergenic
AGGCTTCCCATACAGAGACT+AGG 0.578165 4_1:+53572219 None:intergenic
TACCTTCACAAATGAGAAGT+CGG 0.580484 4_1:-53571023 Msa0555520:CDS
TCATTAACTTGCGTCACTCG+TGG 0.584904 4_1:-53569539 Msa0555520:CDS
GAGATGAACATTTACTGTAC+GGG 0.586511 4_1:-53569636 Msa0555520:CDS
CAGTAACTATTGTTGATGCA+GGG 0.589700 4_1:-53571255 Msa0555520:CDS
TCACCGGTACGAACACTCCC+AGG 0.595293 4_1:-53572164 Msa0555520:five_prime_UTR
ATATAATGAAGAATTCCCTC+GGG 0.598954 4_1:+53571481 None:intergenic
TGCCTGTTTGATTTAGTGTG+GGG 0.604837 4_1:-53569438 Msa0555520:three_prime_UTR
AGAATTTCTTGACATTTATG+GGG 0.610502 4_1:-53569916 Msa0555520:intron
CGAAGAAGCTGGCTGATGTG+AGG 0.621819 4_1:-53569596 Msa0555520:CDS
ATGATTAGCGATTTACCCGA+GGG 0.622620 4_1:-53571496 Msa0555520:CDS
GCGCCTGGGAGTGTTCGTAC+CGG 0.623233 4_1:+53572161 None:intergenic
TAATTCTCGAAAATCAAAGA+CGG 0.624079 4_1:+53571378 None:intergenic
GAAACTACAATCAAAATCTG+AGG 0.624111 4_1:+53569473 None:intergenic
AATATTTGCATCAACTATGG+AGG 0.633314 4_1:+53570769 None:intergenic
CACATAAGAAAACGAAACGC+AGG 0.636554 4_1:-53572249 None:intergenic
CAACAAAGTGGAGATACTTG+TGG 0.640766 4_1:-53571411 Msa0555520:CDS
TATGATTAGCGATTTACCCG+AGG 0.648778 4_1:-53571497 Msa0555520:CDS
TAGATCTACGAGGCAATCTG+GGG 0.651047 4_1:+53571333 None:intergenic
ATTCAACTTAGTCAATGACC+GGG 0.668323 4_1:+53571123 None:intergenic
TGGGAGTGTTCGTACCGGTG+AGG 0.669896 4_1:+53572166 None:intergenic
AAACTCCAAAGACATAATGT+GGG 0.676914 4_1:-53571532 Msa0555520:CDS
AGGACAACTCTTGTAAGACA+GGG 0.690229 4_1:+53570978 None:intergenic
GGGAAAATAACGATTCCACA+AGG 0.691654 4_1:+53569364 None:intergenic
GTTGGTCCACTAGATCTACG+AGG 0.818443 4_1:+53571323 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAGTTAAATTAAATGA+GGG + chr4_1:53570912-53570931 None:intergenic 10.0%
!! ATAAAAAGTTAAATTAAATG+AGG + chr4_1:53570913-53570932 None:intergenic 10.0%
!! AAAAAGTTAAATTAAATGAG+GGG + chr4_1:53570911-53570930 None:intergenic 15.0%
!! ATTATTTGCATATTCTTTAA+AGG - chr4_1:53571143-53571162 Msa0555520:CDS 15.0%
!! TCAAGAATAGATTTATATTA+TGG - chr4_1:53572190-53572209 Msa0555520:five_prime_UTR 15.0%
!! CAAGAATAGATTTATATTAT+GGG - chr4_1:53572191-53572210 Msa0555520:five_prime_UTR 15.0%
!!! AATTTTTCAATCGTTTCTTT+GGG - chr4_1:53569421-53569440 Msa0555520:three_prime_UTR 20.0%
!! ATTAAACAACAAATAGTCTT+AGG + chr4_1:53569551-53569570 None:intergenic 20.0%
!! GTTTAATTAACAACATTTAG+TGG - chr4_1:53569564-53569583 Msa0555520:CDS 20.0%
!!! ACTAAGTTGAATATAGTATT+TGG - chr4_1:53570332-53570351 Msa0555520:intron 20.0%
!! GATCAATTACATTTCTTAAT+AGG - chr4_1:53571016-53571035 Msa0555520:CDS 20.0%
!! AAGAATATGCAAATAATACA+AGG + chr4_1:53571140-53571159 None:intergenic 20.0%
!! TAGAATTTCTTGACATTTAT+GGG - chr4_1:53571527-53571546 Msa0555520:CDS 20.0%
!! AAATTATTGTTAGTCGTTAA+AGG + chr4_1:53571590-53571609 None:intergenic 20.0%
!!! TGTTTTATTTGATTGATAAC+TGG - chr4_1:53572136-53572155 Msa0555520:intron 20.0%
! TGGAAATGATTTGAATACAA+CGG + chr4_1:53569402-53569421 None:intergenic 25.0%
! CAAAGAAACGATTGAAAAAT+TGG + chr4_1:53569422-53569441 None:intergenic 25.0%
!!! CAATTTTTCAATCGTTTCTT+TGG - chr4_1:53569420-53569439 Msa0555520:three_prime_UTR 25.0%
! ATTAAACAACAAACAGACTT+GGG + chr4_1:53569721-53569740 None:intergenic 25.0%
! AATTAAACAACAAACAGACT+TGG + chr4_1:53569722-53569741 None:intergenic 25.0%
!!! CATTGATTCATATGAGAATA+GGG + chr4_1:53569780-53569799 None:intergenic 25.0%
!!! TCATTGATTCATATGAGAAT+AGG + chr4_1:53569781-53569800 None:intergenic 25.0%
! AATATAATGAAGAATTCCCT+CGG + chr4_1:53569967-53569986 None:intergenic 25.0%
! TAATTCTCGAAAATCAAAGA+CGG + chr4_1:53570069-53570088 None:intergenic 25.0%
!!! CAATGAAGAGCTTTTTTATA+CGG + chr4_1:53570163-53570182 None:intergenic 25.0%
! AAGATAATATCTTCAAGCTA+GGG + chr4_1:53570391-53570410 None:intergenic 25.0%
! AAAGATAATATCTTCAAGCT+AGG + chr4_1:53570392-53570411 None:intergenic 25.0%
! ACTTAAAGATGAAAGATTCA+CGG + chr4_1:53570612-53570631 None:intergenic 25.0%
! CAAGGAAACAATTTATAGTT+GGG + chr4_1:53570646-53570665 None:intergenic 25.0%
! ACAAGGAAACAATTTATAGT+TGG + chr4_1:53570647-53570666 None:intergenic 25.0%
! ATCAATATTTGCATCAACTA+TGG + chr4_1:53570681-53570700 None:intergenic 25.0%
! TTGATGCAAATATTGATCTT+GGG - chr4_1:53570684-53570703 Msa0555520:CDS 25.0%
! ATGACCCAATTTATTAATCA+TGG - chr4_1:53570940-53570959 Msa0555520:CDS 25.0%
!!! CAGACTTGATTTTTTTCTAT+TGG - chr4_1:53570979-53570998 Msa0555520:CDS 25.0%
! TGTCTATTGTAAATGTTGAT+TGG - chr4_1:53571108-53571127 Msa0555520:CDS 25.0%
! ACACCTTCATAAAAATTAGT+TGG - chr4_1:53571255-53571274 Msa0555520:CDS 25.0%
!! ACACCAACTAATTTTTATGA+AGG + chr4_1:53571261-53571280 None:intergenic 25.0%
! CTAAAAGACACCTTTATAAA+AGG - chr4_1:53571310-53571329 Msa0555520:CDS 25.0%
! TCGTTGTGATATTTAAAGAA+GGG + chr4_1:53571351-53571370 None:intergenic 25.0%
! ATCGTTGTGATATTTAAAGA+AGG + chr4_1:53571352-53571371 None:intergenic 25.0%
!!! ATGTCAAGAAATTCTAGTTT+AGG + chr4_1:53571523-53571542 None:intergenic 25.0%
! CTAGAATTTCTTGACATTTA+TGG - chr4_1:53571526-53571545 Msa0555520:CDS 25.0%
! AGAATTTCTTGACATTTATG+GGG - chr4_1:53571528-53571547 Msa0555520:CDS 25.0%
!!! TTGTGTATTGATTCTTGTTT+AGG - chr4_1:53571627-53571646 Msa0555520:intron 25.0%
!!! TGTGTATTGATTCTTGTTTA+GGG - chr4_1:53571628-53571647 Msa0555520:intron 25.0%
!!! GATTTTGATTGTAGTTTCAT+CGG - chr4_1:53571976-53571995 Msa0555520:intron 25.0%
!! TTTTCACATATATTACCTTG+TGG - chr4_1:53572065-53572084 Msa0555520:intron 25.0%
! TTAGATTCTTACAAATGCAT+GGG + chr4_1:53572103-53572122 None:intergenic 25.0%
! TTTAGATTCTTACAAATGCA+TGG + chr4_1:53572104-53572123 None:intergenic 25.0%
! AAATCTATTCTTGACACAAA+TGG + chr4_1:53572184-53572203 None:intergenic 25.0%
!!! TTTATTAACTTGTGCCTTAA+GGG + chr4_1:53572232-53572251 None:intergenic 25.0%
!!! ATTTATTAACTTGTGCCTTA+AGG + chr4_1:53572233-53572252 None:intergenic 25.0%
ATACAACGGAATGATTTGAA+CGG + chr4_1:53569388-53569407 None:intergenic 30.0%
GGAAGTAATTGCAAATGATA+AGG + chr4_1:53569759-53569778 None:intergenic 30.0%
!!! CAATGATTTTTTACCCTTCT+TGG - chr4_1:53569795-53569814 Msa0555520:CDS 30.0%
!!! TTTCGTTTCATGTTTTAACC+AGG - chr4_1:53569848-53569867 Msa0555520:intron 30.0%
TAAACTCCAAAGACATAATG+TGG - chr4_1:53569911-53569930 Msa0555520:intron 30.0%
AAACTCCAAAGACATAATGT+GGG - chr4_1:53569912-53569931 Msa0555520:intron 30.0%
ATATAATGAAGAATTCCCTC+GGG + chr4_1:53569966-53569985 None:intergenic 30.0%
CTTCTATATTAGCAACAAAG+TGG - chr4_1:53570021-53570040 Msa0555520:CDS 30.0%
AAAATCAAAGACGGGTAATT+GGG + chr4_1:53570060-53570079 None:intergenic 30.0%
AATTCTCGAAAATCAAAGAC+GGG + chr4_1:53570068-53570087 None:intergenic 30.0%
ACCTAGAATCTGAAAATAGT+AGG - chr4_1:53570270-53570289 Msa0555520:intron 30.0%
! ACCTACTATTTTCAGATTCT+AGG + chr4_1:53570274-53570293 None:intergenic 30.0%
TATTCAACTTAGTCAATGAC+CGG + chr4_1:53570325-53570344 None:intergenic 30.0%
AATTCCAACATTGAAGAAGT+TGG - chr4_1:53570529-53570548 Msa0555520:intron 30.0%
AATATTTGCATCAACTATGG+AGG + chr4_1:53570678-53570697 None:intergenic 30.0%
GTTGATGCAAATATTGATCT+TGG - chr4_1:53570683-53570702 Msa0555520:CDS 30.0%
ACCCAATTTATTAATCATGG+AGG - chr4_1:53570943-53570962 Msa0555520:CDS 30.0%
CCCTCCATGATTAATAAATT+GGG + chr4_1:53570947-53570966 None:intergenic 30.0%
CCCAATTTATTAATCATGGA+GGG - chr4_1:53570944-53570963 Msa0555520:CDS 30.0%
ACCCTCCATGATTAATAAAT+TGG + chr4_1:53570948-53570967 None:intergenic 30.0%
TCACACTTCGTAATACTTAA+GGG + chr4_1:53571060-53571079 None:intergenic 30.0%
ATCACACTTCGTAATACTTA+AGG + chr4_1:53571061-53571080 None:intergenic 30.0%
TTGTTAAAAGACACCTTCAT+GGG + chr4_1:53571185-53571204 None:intergenic 30.0%
ATTGTTAAAAGACACCTTCA+TGG + chr4_1:53571186-53571205 None:intergenic 30.0%
CAAGTTATTCTATGAGCATT+TGG + chr4_1:53571290-53571309 None:intergenic 30.0%
! CTAGAAGACACCTTTTATAA+AGG + chr4_1:53571323-53571342 None:intergenic 30.0%
!! ATTCTAGTTTAGGACTCTTT+CGG + chr4_1:53571513-53571532 None:intergenic 30.0%
TTATTGTTAGTCGTTAAAGG+TGG + chr4_1:53571587-53571606 None:intergenic 30.0%
! TGTGATATTTCAGATTTTCG+TGG - chr4_1:53571727-53571746 Msa0555520:intron 30.0%
AAACTTCACCAATCTGATTT+CGG + chr4_1:53571761-53571780 None:intergenic 30.0%
TAGAAAATGTCACGTTCTTA+AGG - chr4_1:53571785-53571804 Msa0555520:intron 30.0%
AGAAAATGTCACGTTCTTAA+GGG - chr4_1:53571786-53571805 Msa0555520:intron 30.0%
ATCAAAAAAATCGAAGAAGC+TGG - chr4_1:53571837-53571856 Msa0555520:intron 30.0%
GAAACTACAATCAAAATCTG+AGG + chr4_1:53571974-53571993 None:intergenic 30.0%
TCATGAACTTGACTAACAGA+CGG + chr4_1:53569668-53569687 None:intergenic 35.0%
!!! TGATTTTTTACCCTTCTTGG+TGG - chr4_1:53569798-53569817 Msa0555520:CDS 35.0%
TATCACCCACATTATGTCTT+TGG + chr4_1:53569920-53569939 None:intergenic 35.0%
TATTCTTTCTCGTCTCTCTA+CGG - chr4_1:53569983-53570002 Msa0555520:CDS 35.0%
GAAAATCAAAGACGGGTAAT+TGG + chr4_1:53570061-53570080 None:intergenic 35.0%
!!! GAAGAGCTTTTTTATACGGT+TGG + chr4_1:53570159-53570178 None:intergenic 35.0%
CAGTAACTATTGTTGATGCA+GGG - chr4_1:53570189-53570208 Msa0555520:intron 35.0%
TGTGTTACCCAATAGTTTCT+CGG - chr4_1:53570295-53570314 Msa0555520:intron 35.0%
ATTCAACTTAGTCAATGACC+GGG + chr4_1:53570324-53570343 None:intergenic 35.0%
TACCTTCACAAATGAGAAGT+CGG - chr4_1:53570421-53570440 Msa0555520:intron 35.0%
TGTCCTTCGAAAAATGTTAC+TGG - chr4_1:53570483-53570502 Msa0555520:intron 35.0%
GTCCTTCGAAAAATGTTACT+GGG - chr4_1:53570484-53570503 Msa0555520:intron 35.0%
ATGTCCAACTTCTTCAATGT+TGG + chr4_1:53570536-53570555 None:intergenic 35.0%
! CAACATGCAGTTCGTTATTT+TGG + chr4_1:53570721-53570740 None:intergenic 35.0%
GCTATCAGATGAAACTATTC+AGG - chr4_1:53570793-53570812 Msa0555520:CDS 35.0%
CACACTTCGTAATACTTAAG+GGG + chr4_1:53571059-53571078 None:intergenic 35.0%
! CTTTTAACAATCCACACTCA+AGG - chr4_1:53571195-53571214 Msa0555520:CDS 35.0%
TCTGCTAATACTTCACAACT+AGG + chr4_1:53571484-53571503 None:intergenic 35.0%
TTAGGGATCTTACTTATCCT+TGG - chr4_1:53571645-53571664 Msa0555520:intron 35.0%
! AGAGAAGATTTGAAACAGCA+AGG + chr4_1:53571700-53571719 None:intergenic 35.0%
GGAGATGAACATTTACTGTA+CGG - chr4_1:53571807-53571826 Msa0555520:intron 35.0%
GAGATGAACATTTACTGTAC+GGG - chr4_1:53571808-53571827 Msa0555520:intron 35.0%
GACTCTCATTCATTCGTTAC+AGG + chr4_1:53569248-53569267 None:intergenic 40.0%
CATGAACTTGACTAACAGAC+GGG + chr4_1:53569667-53569686 None:intergenic 40.0%
AAGTACGAAACCACCAAGAA+GGG + chr4_1:53569811-53569830 None:intergenic 40.0%
! TTTTAACCAGGCATAGCTCA+TGG - chr4_1:53569860-53569879 Msa0555520:intron 40.0%
TATGATTAGCGATTTACCCG+AGG - chr4_1:53569947-53569966 Msa0555520:CDS 40.0%
ATGATTAGCGATTTACCCGA+GGG - chr4_1:53569948-53569967 Msa0555520:CDS 40.0%
CAACAAAGTGGAGATACTTG+TGG - chr4_1:53570033-53570052 Msa0555520:CDS 40.0%
GGTTGGATTTGTGAAGTAGT+TGG + chr4_1:53570142-53570161 None:intergenic 40.0%
CCTGCATCAACAATAGTTAC+TGG + chr4_1:53570191-53570210 None:intergenic 40.0%
CCAGTAACTATTGTTGATGC+AGG - chr4_1:53570188-53570207 Msa0555520:intron 40.0%
TTCCTTGATTCTGTACCTGA+TGG - chr4_1:53570356-53570375 Msa0555520:intron 40.0%
TACCATCAGGTACAGAATCA+AGG + chr4_1:53570361-53570380 None:intergenic 40.0%
!!! TCGGCTCAAAGACTTTTTTC+TGG - chr4_1:53570440-53570459 Msa0555520:intron 40.0%
!!! CGGCTCAAAGACTTTTTTCT+GGG - chr4_1:53570441-53570460 Msa0555520:intron 40.0%
AGGACAACTCTTGTAAGACA+GGG + chr4_1:53570469-53570488 None:intergenic 40.0%
AAGGACAACTCTTGTAAGAC+AGG + chr4_1:53570470-53570489 None:intergenic 40.0%
!! CTCCCAGTAACATTTTTCGA+AGG + chr4_1:53570489-53570508 None:intergenic 40.0%
CTATGGAGGTAGAGTTAACA+AGG + chr4_1:53570664-53570683 None:intergenic 40.0%
TTAAAAGACACCTTCATGGG+TGG + chr4_1:53571182-53571201 None:intergenic 40.0%
TGAAAATCACACCTTGAGTG+TGG + chr4_1:53571209-53571228 None:intergenic 40.0%
CGTAGTTAAGACACTAGCAA+GGG + chr4_1:53571393-53571412 None:intergenic 40.0%
TGCGTCAAATTCTTGAACGA+AGG + chr4_1:53571439-53571458 None:intergenic 40.0%
AAAGGTGGCAGAAGAAAATC+TGG + chr4_1:53571572-53571591 None:intergenic 40.0%
GGATCTTACTTATCCTTGGA+TGG - chr4_1:53571649-53571668 Msa0555520:intron 40.0%
AGATGAAGCCGAAATCAGAT+TGG - chr4_1:53571750-53571769 Msa0555520:intron 40.0%
AGGAACCAATTGCAAGCTTT+AGG - chr4_1:53571868-53571887 Msa0555520:intron 40.0%
!! CAATTGCAAGCTTTAGGCAT+GGG - chr4_1:53571874-53571893 Msa0555520:intron 40.0%
!!! CACTCGTGGTTTTGATGTTT+TGG - chr4_1:53571919-53571938 Msa0555520:intron 40.0%
!!! TCGTGGTTTTGATGTTTTGG+CGG - chr4_1:53571922-53571941 Msa0555520:intron 40.0%
! TGTGCCTGTTTGATTTAGTG+TGG - chr4_1:53572004-53572023 Msa0555520:intron 40.0%
! GTGCCTGTTTGATTTAGTGT+GGG - chr4_1:53572005-53572024 Msa0555520:intron 40.0%
! TGCCTGTTTGATTTAGTGTG+GGG - chr4_1:53572006-53572025 Msa0555520:intron 40.0%
!! TTAGTGTGGGGCATTTTCAA+TGG - chr4_1:53572018-53572037 Msa0555520:intron 40.0%
GGGAAAATAACGATTCCACA+AGG + chr4_1:53572083-53572102 None:intergenic 40.0%
! GATAACTGGTTAAGTGTTGC+TGG - chr4_1:53572150-53572169 Msa0555520:five_prime_UTR 40.0%
! TGGTTAAGTGTTGCTGGAAA+TGG - chr4_1:53572156-53572175 Msa0555520:five_prime_UTR 40.0%
! AATGCTAACTTGTGCCCTTA+AGG - chr4_1:53572215-53572234 Msa0555520:five_prime_UTR 40.0%
TTTCTGCCCTAGTCTCTGTA+TGG - chr4_1:53569218-53569237 Msa0555520:three_prime_UTR 45.0%
TTCTGCCCTAGTCTCTGTAT+GGG - chr4_1:53569219-53569238 Msa0555520:three_prime_UTR 45.0%
CAAGTACGAAACCACCAAGA+AGG + chr4_1:53569812-53569831 None:intergenic 45.0%
GGGGACTTAGAATTTCGCTT+TGG + chr4_1:53570095-53570114 None:intergenic 45.0%
TAGATCTACGAGGCAATCTG+GGG + chr4_1:53570114-53570133 None:intergenic 45.0%
CTAGATCTACGAGGCAATCT+GGG + chr4_1:53570115-53570134 None:intergenic 45.0%
ACTAGATCTACGAGGCAATC+TGG + chr4_1:53570116-53570135 None:intergenic 45.0%
AGATTGCCTCGTAGATCTAG+TGG - chr4_1:53570115-53570134 Msa0555520:intron 45.0%
CTAGGGAAACAGATACCATC+AGG + chr4_1:53570374-53570393 None:intergenic 45.0%
! AGCCGACTTCTCATTTGTGA+AGG + chr4_1:53570426-53570445 None:intergenic 45.0%
ATTGAGCTGTTCAGTCGTCT+TGG - chr4_1:53570752-53570771 Msa0555520:CDS 45.0%
GCGTAGTTAAGACACTAGCA+AGG + chr4_1:53571394-53571413 None:intergenic 45.0%
TATCCTTGGATGGTGAAGAC+TGG - chr4_1:53571659-53571678 Msa0555520:intron 45.0%
CCATGCCTAAAGCTTGCAAT+TGG + chr4_1:53571876-53571895 None:intergenic 45.0%
!! CCAATTGCAAGCTTTAGGCA+TGG - chr4_1:53571873-53571892 Msa0555520:intron 45.0%
!! TCATTAACTTGCGTCACTCG+TGG - chr4_1:53571905-53571924 Msa0555520:intron 45.0%
!!! CGTGGTTTTGATGTTTTGGC+GGG - chr4_1:53571923-53571942 Msa0555520:intron 45.0%
TGCCCCACACTAAATCAAAC+AGG + chr4_1:53572011-53572030 None:intergenic 45.0%
GGCTTCCCATACAGAGACTA+GGG + chr4_1:53569227-53569246 None:intergenic 50.0%
AGGCTTCCCATACAGAGACT+AGG + chr4_1:53569228-53569247 None:intergenic 50.0%
TAGAAGCCATGAGCTATGCC+TGG + chr4_1:53569869-53569888 None:intergenic 50.0%
TTCTCGTCTCTCTACGGAAG+AGG - chr4_1:53569989-53570008 Msa0555520:CDS 50.0%
GTTGGTCCACTAGATCTACG+AGG + chr4_1:53570124-53570143 None:intergenic 50.0%
CGGGATGCCGAGAAACTATT+GGG + chr4_1:53570305-53570324 None:intergenic 50.0%
CCAATAGTTTCTCGGCATCC+CGG - chr4_1:53570303-53570322 Msa0555520:intron 50.0%
!! TTGGTAGTGTCGAGTCTCTC+AGG - chr4_1:53570771-53570790 Msa0555520:CDS 50.0%
TTGCTAGAAGCCACCCATGA+AGG - chr4_1:53571169-53571188 Msa0555520:CDS 50.0%
TGTCCAGTCTTCACCATCCA+AGG + chr4_1:53571665-53571684 None:intergenic 50.0%
GCAGTTCAAACTCTGCGCCT+GGG + chr4_1:53569300-53569319 None:intergenic 55.0%
TGCAGTTCAAACTCTGCGCC+TGG + chr4_1:53569301-53569320 None:intergenic 55.0%
CCGGGATGCCGAGAAACTAT+TGG + chr4_1:53570306-53570325 None:intergenic 55.0%
CGAAGAAGCTGGCTGATGTG+AGG - chr4_1:53571848-53571867 Msa0555520:intron 55.0%
AGTCTCGCTCTTCGCCTCAC+CGG - chr4_1:53569264-53569283 Msa0555520:three_prime_UTR 60.0%
!! TGGGAGTGTTCGTACCGGTG+AGG + chr4_1:53569281-53569300 None:intergenic 60.0%
TCACCGGTACGAACACTCCC+AGG - chr4_1:53569280-53569299 Msa0555520:three_prime_UTR 60.0%
!! GCGCCTGGGAGTGTTCGTAC+CGG + chr4_1:53569286-53569305 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 53569200 53572266 53569200 ID=Msa0555520;Name=Msa0555520
chr4_1 mRNA 53569200 53572266 53569200 ID=Msa0555520-mRNA-1;Parent=Msa0555520;Name=Msa0555520-mRNA-1;_AED=0.05;_eAED=0.05;_QI=137|1|1|1|0.66|0.5|4|333|456
chr4_1 exon 53569200 53569817 53569200 ID=Msa0555520-mRNA-1:exon:15579;Parent=Msa0555520-mRNA-1
chr4_1 exon 53569917 53570066 53569917 ID=Msa0555520-mRNA-1:exon:15578;Parent=Msa0555520-mRNA-1
chr4_1 exon 53570652 53571596 53570652 ID=Msa0555520-mRNA-1:exon:15577;Parent=Msa0555520-mRNA-1
chr4_1 exon 53572139 53572266 53572139 ID=Msa0555520-mRNA-1:exon:15576;Parent=Msa0555520-mRNA-1
chr4_1 five_prime_UTR 53572139 53572266 53572139 ID=Msa0555520-mRNA-1:five_prime_utr;Parent=Msa0555520-mRNA-1
chr4_1 five_prime_UTR 53571588 53571596 53571588 ID=Msa0555520-mRNA-1:five_prime_utr;Parent=Msa0555520-mRNA-1
chr4_1 CDS 53570652 53571587 53570652 ID=Msa0555520-mRNA-1:cds;Parent=Msa0555520-mRNA-1
chr4_1 CDS 53569917 53570066 53569917 ID=Msa0555520-mRNA-1:cds;Parent=Msa0555520-mRNA-1
chr4_1 CDS 53569533 53569817 53569533 ID=Msa0555520-mRNA-1:cds;Parent=Msa0555520-mRNA-1
chr4_1 three_prime_UTR 53569200 53569532 53569200 ID=Msa0555520-mRNA-1:three_prime_utr;Parent=Msa0555520-mRNA-1
Gene Sequence

>Msa0555520

ATGGCTTCTACAATCTCATCATCAAATTTACATAAACTCCAAAGACATAATGTGGGTGATATGAAAGATATGATTAGCGATTTACCCGAGGGAATTCTTCATTATATTCTTTCTCGTCTCTCTACGGAAGAGGCTGTAAGAACTTCTATATTAGCAACAAAGTGGAGATACTTGTGGACCCAATTACCCGTCTTTGATTTTCGAGAATTATCTCCAAAGCGAAATTCTAAGTCCCCAGATTGCCTCGTAGATCTAGTGGACCAACTACTTCACAAATCCAACCGTATAAAAAAGCTCTTCATTGAATTACCAGTAACTATTGTTGATGCAGGGAAAGTTAGTTCTATGTTATCTTCTGCATTGATGCATGATATCTATGATCTTACACTTAACCTAGAATCTGAAAATAGTAGGTTTGTGTTACCCAATAGTTTCTCGGCATCCCGGTCATTGACTAAGTTGAATATAGTATTTGGCTTCCTTGATTCTGTACCTGATGGTATCTGTTTCCCTAGCTTGAAGATATTATCTTTTGCACATCTTACCTTCACAAATGAGAAGTCGGCTCAAAGACTTTTTTCTGGGTGCCCTGTCTTACAAGAGTTGTCCTTCGAAAAATGTTACTGGGAGAACATAAACATTAGTGTTGCAATTCCAACATTGAAGAAGTTGGACATCTTTTTCAGATCTTCTAGTCTAGATCGTAACAGTTGTATGTTCGAAATTGATGCCGTGAATCTTTCATCTTTAAGTTACAAAAGTAACCCAACTATAAATTGTTTCCTTGTTAACTCTACCTCCATAGTTGATGCAAATATTGATCTTGGGTTTTTCTGTGTCCAAAATAACGAACTGCATGTTGCTGTATTTGCAATTGAGCTGTTCAGTCGTCTTGGTAGTGTCGAGTCTCTCAGGCTATCAGATGAAACTATTCAGTGTCTTAACTACGCAAAATCTGCTCTTCATCTTTTACCTTCGTTCAAGAATTTGACGCATCTTGAAGTGCATTTCGATGATCCTAGTTGTGAAGTATTAGCAGACATTCTCCGAAAGAGTCCTAAACTAGAATTTCTTGACATTTATGGGGGATCTTACTTATCCTTGGATGGTGAAGACTGGACATCAGATTCATTGCCTTGCTGTTTCAAATCTTCTCTCAAATCATGTGATATTTCAGATTTTCGTGGAGATGAAGCCGAAATCAGATTGGTGAAGTTTTTGTTAGAAAATGTCACGTTCTTAAGGGAGATGAACATTTACTGTACGGGATATCTATCAAAAAAATCGAAGAAGCTGGCTGATGTGAGGAACCAATTGCAAGCTTTAGGCATGGGAAGTTGTGTCATTAACTTGCGTCACTCGTGGTTTTGA

Protein sequence

>Msa0555520

MASTISSSNLHKLQRHNVGDMKDMISDLPEGILHYILSRLSTEEAVRTSILATKWRYLWTQLPVFDFRELSPKRNSKSPDCLVDLVDQLLHKSNRIKKLFIELPVTIVDAGKVSSMLSSALMHDIYDLTLNLESENSRFVLPNSFSASRSLTKLNIVFGFLDSVPDGICFPSLKILSFAHLTFTNEKSAQRLFSGCPVLQELSFEKCYWENINISVAIPTLKKLDIFFRSSSLDRNSCMFEIDAVNLSSLSYKSNPTINCFLVNSTSIVDANIDLGFFCVQNNELHVAVFAIELFSRLGSVESLRLSDETIQCLNYAKSALHLLPSFKNLTHLEVHFDDPSCEVLADILRKSPKLEFLDIYGGSYLSLDGEDWTSDSLPCCFKSSLKSCDISDFRGDEAEIRLVKFLLENVTFLREMNIYCTGYLSKKSKKLADVRNQLQALGMGSCVINLRHSWF*