Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0556550 | XP_003608059.2 | 87.016 | 439 | 7 | 4 | 1 | 389 | 1 | 439 | 0.0 | 754 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0556550 | sp|O52225|DPO1_THEFI | 40.805 | 174 | 94 | 4 | 157 | 327 | 65 | 232 | 1.24e-33 | 136 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0556550 | G7JNK8 | 87.016 | 439 | 7 | 4 | 1 | 389 | 1 | 439 | 0.0 | 754 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0556550 | Msa0694640 | 0.881196 | 2.934921e-70 | -8.615850e-47 |
| Msa0556550 | Msa0705670 | 0.806278 | 8.892147e-50 | -8.615850e-47 |
| Msa0556550 | Msa1293060 | 0.801364 | 9.324893e-49 | -8.615850e-47 |
| Msa0556550 | Msa1428050 | 0.807812 | 4.209549e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0556550 | MtrunA17_Chr4g0045531 | 82.863 | 461 | 7 | 4 | 1 | 389 | 1 | 461 | 0.0 | 746 |
| Msa0556550 | MtrunA17_Chr6g0462421 | 29.545 | 176 | 98 | 4 | 160 | 314 | 108 | 278 | 1.21e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0556550 | AT3G52050.2 | 58.118 | 425 | 126 | 7 | 10 | 388 | 5 | 423 | 6.08e-156 | 446 |
| Msa0556550 | AT3G52050.1 | 58.118 | 425 | 126 | 7 | 10 | 388 | 5 | 423 | 6.08e-156 | 446 |
| Msa0556550 | AT3G52050.3 | 58.118 | 425 | 126 | 7 | 10 | 388 | 28 | 446 | 1.32e-155 | 446 |
| Msa0556550 | AT3G52050.4 | 57.176 | 425 | 118 | 9 | 10 | 388 | 5 | 411 | 9.54e-150 | 430 |
| Msa0556550 | AT3G52050.8 | 56.235 | 425 | 116 | 8 | 10 | 388 | 5 | 405 | 7.76e-147 | 422 |
| Msa0556550 | AT3G52050.7 | 56.235 | 425 | 116 | 8 | 10 | 388 | 5 | 405 | 7.76e-147 | 422 |
| Msa0556550 | AT3G52050.6 | 56.235 | 425 | 116 | 8 | 10 | 388 | 28 | 428 | 3.59e-146 | 421 |
| Msa0556550 | AT3G52050.5 | 56.196 | 347 | 97 | 7 | 10 | 325 | 28 | 350 | 3.04e-114 | 338 |
| Msa0556550 | AT1G34380.3 | 28.485 | 165 | 106 | 5 | 160 | 314 | 120 | 282 | 3.67e-12 | 67.4 |
| Msa0556550 | AT1G34380.2 | 28.485 | 165 | 106 | 5 | 160 | 314 | 120 | 282 | 5.28e-12 | 67.0 |
Find 143 sgRNAs with CRISPR-Local
Find 732 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGGATATGATTGCACTTTC+TGG | 0.151527 | 4_1:-54804605 | Msa0556550:CDS |
| GTTCTTTGTAGAATTTATTT+AGG | 0.234277 | 4_1:-54801165 | Msa0556550:three_prime_UTR |
| CTTGCAGATTATTGATGTTC+TGG | 0.236084 | 4_1:-54809373 | Msa0556550:intron |
| GCAGCTCCGTAACTAATTTC+TGG | 0.255837 | 4_1:+54810991 | None:intergenic |
| GTGAAGTTCATTGAGATATC+AGG | 0.263990 | 4_1:-54801375 | Msa0556550:exon |
| TCTACCCAATGCCCATCTTC+TGG | 0.274327 | 4_1:-54801046 | Msa0556550:three_prime_UTR |
| TCTACAAAGAACCATCAATT+TGG | 0.280858 | 4_1:+54801176 | None:intergenic |
| GTGCAATTGATCAGTAAATT+TGG | 0.302237 | 4_1:-54803834 | Msa0556550:intron |
| TTTGTACATACAGGAGTTAA+TGG | 0.317174 | 4_1:-54803876 | Msa0556550:intron |
| TAATACGATCCTCTTTGATT+TGG | 0.320846 | 4_1:+54802447 | None:intergenic |
| TGTTTGAAGGCCAGAACTTT+AGG | 0.328926 | 4_1:-54806239 | Msa0556550:intron |
| TACTCCTGATACCATTGTTC+AGG | 0.336956 | 4_1:-54806178 | Msa0556550:CDS |
| TGTTTAACGTTAATAGAAAC+AGG | 0.343534 | 4_1:+54800919 | None:intergenic |
| AAGCACTGATAGCTGTTAAA+AGG | 0.346617 | 4_1:+54801468 | None:intergenic |
| GTGCAATCATATCCACAAAC+TGG | 0.353594 | 4_1:+54804612 | None:intergenic |
| TAGAGCAGAGATACTTAAAA+TGG | 0.355097 | 4_1:-54801341 | Msa0556550:three_prime_UTR |
| CTCAATAGGATGGTTTCGTT+TGG | 0.356859 | 4_1:-54804677 | Msa0556550:intron |
| CATACAGGAGTTAATGGAAT+TGG | 0.360524 | 4_1:-54803870 | Msa0556550:intron |
| GCAGTTTCAGTGTCGGAAAC+GGG | 0.364190 | 4_1:+54811446 | None:intergenic |
| ATAGATTGTGCCTAAAGTTC+TGG | 0.365868 | 4_1:+54806229 | None:intergenic |
| AAAATGGAGCATGTCAATAC+TGG | 0.370290 | 4_1:-54801325 | Msa0556550:three_prime_UTR |
| TTCATTAAATGATAGGTTCC+AGG | 0.372126 | 4_1:-54806047 | Msa0556550:intron |
| GACAGATCTGATAATATTCC+AGG | 0.374957 | 4_1:-54804581 | Msa0556550:intron |
| GTAGTAGGAAAATGACAAAT+TGG | 0.376188 | 4_1:-54801113 | Msa0556550:three_prime_UTR |
| GAGGACTTTGCAGAGCGATT+TGG | 0.378012 | 4_1:-54804650 | Msa0556550:CDS |
| GAATTGTTCTAAACAAGAAA+TGG | 0.388059 | 4_1:+54811290 | None:intergenic |
| GGAAGTGACAATAGCTCTAC+TGG | 0.389140 | 4_1:-54801092 | Msa0556550:three_prime_UTR |
| GTATCATTTGTGGGAAAAGT+TGG | 0.390864 | 4_1:-54801405 | Msa0556550:CDS |
| CTACCCAATGCCCATCTTCT+GGG | 0.406876 | 4_1:-54801045 | Msa0556550:three_prime_UTR |
| CTAGCACATGCCGATGGAAA+TGG | 0.412460 | 4_1:-54810186 | Msa0556550:CDS |
| ATGCCGATGGAAATGGAGAT+TGG | 0.416221 | 4_1:-54810179 | Msa0556550:CDS |
| CACCACGTGGAGCAAGTCTT+AGG | 0.416399 | 4_1:+54805532 | None:intergenic |
| TGAATGCGACGGAGAGGAAA+TGG | 0.423423 | 4_1:+54811268 | None:intergenic |
| TGTGGGAAAAGTTGGATTCA+AGG | 0.423479 | 4_1:-54801397 | Msa0556550:CDS |
| AAGAGAACGCACCTTTGAAA+TGG | 0.423814 | 4_1:+54811408 | None:intergenic |
| CCCAGCATCAACACTCCTTA+AGG | 0.425425 | 4_1:+54805992 | None:intergenic |
| TGATACACTCTCCTGATGAT+AGG | 0.425535 | 4_1:+54801422 | None:intergenic |
| GAATTAAGAGTCTGACGAAA+TGG | 0.427805 | 4_1:+54807343 | None:intergenic |
| AGTCCCTGAACAATGGTATC+AGG | 0.428886 | 4_1:+54806174 | None:intergenic |
| ATGGGCATTGGGTAGAAGTT+AGG | 0.431762 | 4_1:+54801053 | None:intergenic |
| TGATTGGAACATTAGCCTTA+AGG | 0.432237 | 4_1:-54806007 | Msa0556550:CDS |
| TTCTTTCTACTCTATTCAAA+TGG | 0.432437 | 4_1:-54811350 | Msa0556550:exon |
| GGTTATGTATGCCAAATTGA+TGG | 0.435393 | 4_1:-54801187 | Msa0556550:three_prime_UTR |
| TGGCCTTGATGGATGCTTTG+AGG | 0.438000 | 4_1:+54806145 | None:intergenic |
| GGAGGCACCGTTCCGGTGGT+TGG | 0.438122 | 4_1:+54811012 | None:intergenic |
| TGCAGTTTCAGTGTCGGAAA+CGG | 0.443836 | 4_1:+54811445 | None:intergenic |
| GAATAGAGTAGAAAGAATAA+TGG | 0.444397 | 4_1:+54811356 | None:intergenic |
| AATTTCTGGAGGCACCGTTC+CGG | 0.448299 | 4_1:+54811005 | None:intergenic |
| AGGCACATTGGAGAAGTTGT+TGG | 0.456254 | 4_1:-54802480 | Msa0556550:CDS |
| TTCTGACTGGTCCCAGAAGA+TGG | 0.458951 | 4_1:+54801034 | None:intergenic |
| CGTGAAGAACGAAGAAGGTT+TGG | 0.460304 | 4_1:+54811199 | None:intergenic |
| CAGGAGAGTGTATCATTTGT+GGG | 0.465284 | 4_1:-54801414 | Msa0556550:CDS |
| TCTGAAACCATCCCAGTTTG+TGG | 0.473588 | 4_1:-54804624 | Msa0556550:CDS |
| TGCCGATGGAAATGGAGATT+GGG | 0.481773 | 4_1:-54810178 | Msa0556550:CDS |
| GCCTTAAGGAGTGTTGATGC+TGG | 0.485198 | 4_1:-54805993 | Msa0556550:CDS |
| GAAATGGGAGTGAAGAAAGA+AGG | 0.487122 | 4_1:+54811306 | None:intergenic |
| GACTTTGCAGAGCGATTTGG+AGG | 0.490840 | 4_1:-54804647 | Msa0556550:CDS |
| TCAGGAGAGTGTATCATTTG+TGG | 0.491632 | 4_1:-54801415 | Msa0556550:CDS |
| AATCCCCTCATGTTGTATTG+TGG | 0.492535 | 4_1:+54801300 | None:intergenic |
| TCTTTGGATTCACATAAAGA+TGG | 0.492913 | 4_1:-54811054 | Msa0556550:CDS |
| GGCATTGAAGTTAAACGCTA+TGG | 0.501724 | 4_1:+54811377 | None:intergenic |
| AATTGTTCTAAACAAGAAAT+GGG | 0.504361 | 4_1:+54811291 | None:intergenic |
| CAAAGAGGATCGTATTAGAA+AGG | 0.504847 | 4_1:-54802441 | Msa0556550:intron |
| TTTCAGCTGATCCTATCATC+AGG | 0.505189 | 4_1:-54801433 | Msa0556550:CDS |
| GGTCCCAGAAGATGGGCATT+GGG | 0.512616 | 4_1:+54801042 | None:intergenic |
| AATTTGATATCTTACCATCA+TGG | 0.513196 | 4_1:+54809153 | None:intergenic |
| TGAAGTTCATTGAGATATCA+GGG | 0.520672 | 4_1:-54801374 | Msa0556550:three_prime_UTR |
| GTAGTTTCCGACGGTGGTGG+TGG | 0.520849 | 4_1:+54811240 | None:intergenic |
| GGACGATTGCTCTTGTACGC+AGG | 0.526137 | 4_1:+54806204 | None:intergenic |
| CGCATGATGCAAATGGTAGT+AGG | 0.527441 | 4_1:-54801128 | Msa0556550:three_prime_UTR |
| TTTAGAACGCATGATGCAAA+TGG | 0.529050 | 4_1:-54801135 | Msa0556550:three_prime_UTR |
| TTTCATCGCAGAACACTCAC+TGG | 0.531428 | 4_1:+54801222 | None:intergenic |
| TTCTGGAGGCACCGTTCCGG+TGG | 0.532696 | 4_1:+54811008 | None:intergenic |
| GTTTCCGACGGTGGTGGTGG+TGG | 0.539455 | 4_1:+54811243 | None:intergenic |
| TGGTCCCAGAAGATGGGCAT+TGG | 0.544451 | 4_1:+54801041 | None:intergenic |
| AGAGTAGTTTCCGACGGTGG+TGG | 0.545071 | 4_1:+54811237 | None:intergenic |
| GCTATCAGTGCTTACGCAGA+AGG | 0.547320 | 4_1:-54801458 | Msa0556550:CDS |
| GAAGTTAAACGCTATGGCAT+GGG | 0.549488 | 4_1:+54811383 | None:intergenic |
| GTGAATGGTACCATGTAGGA+TGG | 0.550198 | 4_1:+54802012 | None:intergenic |
| TGAAGTTAAACGCTATGGCA+TGG | 0.551018 | 4_1:+54811382 | None:intergenic |
| CCTTAAGGAGTGTTGATGCT+GGG | 0.554132 | 4_1:-54805992 | Msa0556550:CDS |
| AACGTATACATAACTTCAAG+AGG | 0.554822 | 4_1:-54801013 | Msa0556550:three_prime_UTR |
| GTGCCTCCAGAAATTAGTTA+CGG | 0.556767 | 4_1:-54810997 | Msa0556550:CDS |
| TACAGTGAATGGTACCATGT+AGG | 0.557179 | 4_1:+54802008 | None:intergenic |
| GTAGAAGCAGATGATGTGAT+TGG | 0.557576 | 4_1:-54806023 | Msa0556550:CDS |
| GATGGTTTCGTTTGGAGCCG+AGG | 0.558802 | 4_1:-54804669 | Msa0556550:CDS |
| ATTCATTCCTTCCCATGTGG+TGG | 0.559114 | 4_1:-54809349 | Msa0556550:intron |
| CAGTTTCAGTGTCGGAAACG+GGG | 0.561805 | 4_1:+54811447 | None:intergenic |
| TCTGACTGGTCCCAGAAGAT+GGG | 0.561855 | 4_1:+54801035 | None:intergenic |
| ACATCATCTGCTTCTACACC+TGG | 0.562883 | 4_1:+54806029 | None:intergenic |
| ACTCCTGATACCATTGTTCA+GGG | 0.563327 | 4_1:-54806177 | Msa0556550:CDS |
| TCTGCAACTTCTCCAACCAC+CGG | 0.572776 | 4_1:-54811024 | Msa0556550:CDS |
| GTGCGCGTGAAGAACGAAGA+AGG | 0.572912 | 4_1:+54811194 | None:intergenic |
| TTGTGATCTCCCATCCTACA+TGG | 0.573874 | 4_1:-54802022 | Msa0556550:CDS |
| CAAAGCATCCATCAAGGCCA+TGG | 0.574954 | 4_1:-54806142 | Msa0556550:CDS |
| GACGATTGCTCTTGTACGCA+GGG | 0.578661 | 4_1:+54806205 | None:intergenic |
| ACTTATTTGAATAGGCACAT+TGG | 0.579686 | 4_1:-54802492 | Msa0556550:intron |
| CTTTGTAGAATTTATTTAGG+TGG | 0.579937 | 4_1:-54801162 | Msa0556550:three_prime_UTR |
| TTCACGCGCACCACTCTCCA+AGG | 0.580932 | 4_1:-54811182 | Msa0556550:intron |
| AAACATACCACCACATGGGA+AGG | 0.581300 | 4_1:+54809342 | None:intergenic |
| AGTTATGTATACGTTCTGAC+TGG | 0.581899 | 4_1:+54801021 | None:intergenic |
| GAGTGTTGATGCTGGGTACA+AGG | 0.582786 | 4_1:-54805985 | Msa0556550:intron |
| TGCAATCATATCCACAAACT+GGG | 0.587318 | 4_1:+54804613 | None:intergenic |
| AACCCAATCTCCATTTCCAT+CGG | 0.588128 | 4_1:+54810176 | None:intergenic |
| TGAACAATGGTATCAGGAGT+AGG | 0.591744 | 4_1:+54806180 | None:intergenic |
| TATACATAACTTCAAGAGGA+TGG | 0.595600 | 4_1:-54801009 | Msa0556550:three_prime_UTR |
| CAGGTAGTGTTTGACCATGA+TGG | 0.597006 | 4_1:-54809167 | Msa0556550:intron |
| AACTTCTCCAACCACCGGAA+CGG | 0.599945 | 4_1:-54811019 | Msa0556550:CDS |
| GGGAGTGAAGAAAGAAGGAG+TGG | 0.600096 | 4_1:+54811311 | None:intergenic |
| TGGAACCACAATACAACATG+AGG | 0.600754 | 4_1:-54801305 | Msa0556550:three_prime_UTR |
| AAATCGCTCTGCAAAGTCCT+CGG | 0.604607 | 4_1:+54804652 | None:intergenic |
| GGTAACAGAACCAATGTGCA+CGG | 0.607886 | 4_1:+54810963 | None:intergenic |
| GGAATTCATTCCTTCCCATG+TGG | 0.611125 | 4_1:-54809352 | Msa0556550:CDS |
| GCTGCTCAACCCGTGCACAT+TGG | 0.615289 | 4_1:-54810973 | Msa0556550:intron |
| AGTTTCAGTGTCGGAAACGG+GGG | 0.618235 | 4_1:+54811448 | None:intergenic |
| ATCATATCCACAAACTGGGA+TGG | 0.619113 | 4_1:+54804617 | None:intergenic |
| ATCTGTTGACCAAATCAAAG+AGG | 0.622060 | 4_1:-54802456 | Msa0556550:CDS |
| GGAACCACAATACAACATGA+GGG | 0.622101 | 4_1:-54801304 | Msa0556550:three_prime_UTR |
| GGTCATCTAGCACATGCCGA+TGG | 0.627959 | 4_1:-54810192 | Msa0556550:CDS |
| ATACCTCAAAGCATCCATCA+AGG | 0.628176 | 4_1:-54806148 | Msa0556550:CDS |
| GGACAAAACATACCACCACA+TGG | 0.628503 | 4_1:+54809337 | None:intergenic |
| TGAATGGTACCATGTAGGAT+GGG | 0.629221 | 4_1:+54802013 | None:intergenic |
| GTAACAGAACCAATGTGCAC+GGG | 0.641689 | 4_1:+54810964 | None:intergenic |
| GTTTAACGTTAATAGAAACA+GGG | 0.643971 | 4_1:+54800920 | None:intergenic |
| GTTTCAGTGTCGGAAACGGG+GGG | 0.644874 | 4_1:+54811449 | None:intergenic |
| GTGTACACTGTACAGGACAA+TGG | 0.645776 | 4_1:-54801506 | Msa0556550:intron |
| TGGTGGTGGTGTGAATGCGA+CGG | 0.646191 | 4_1:+54811257 | None:intergenic |
| GAAGTGACAATAGCTCTACT+GGG | 0.648239 | 4_1:-54801091 | Msa0556550:three_prime_UTR |
| TCTCTTGTTTACTAAACCCG+AGG | 0.649424 | 4_1:-54801980 | Msa0556550:intron |
| ACAATGGTATCAGGAGTAGG+AGG | 0.659704 | 4_1:+54806183 | None:intergenic |
| GTATTGAAGTCCCTGAACAA+TGG | 0.660032 | 4_1:+54806167 | None:intergenic |
| CTCCTAAGACTTGCTCCACG+TGG | 0.661892 | 4_1:-54805534 | Msa0556550:CDS |
| GAGTGTGTTACCTTGGAGAG+TGG | 0.674289 | 4_1:+54811172 | None:intergenic |
| GACAAAACATACCACCACAT+GGG | 0.676208 | 4_1:+54809338 | None:intergenic |
| GCGAGAGTAGTTTCCGACGG+TGG | 0.676946 | 4_1:+54811234 | None:intergenic |
| GCTCCGTAACTAATTTCTGG+AGG | 0.677777 | 4_1:+54810994 | None:intergenic |
| TTGATAGCAAAATTGCACCA+TGG | 0.689907 | 4_1:-54810213 | Msa0556550:intron |
| GAACCACAATACAACATGAG+GGG | 0.699718 | 4_1:-54801303 | Msa0556550:three_prime_UTR |
| CGGCATGTGCTAGATGACCA+TGG | 0.709874 | 4_1:+54810196 | None:intergenic |
| ACTGCGAGAGTAGTTTCCGA+CGG | 0.710307 | 4_1:+54811231 | None:intergenic |
| GTGGTGTGAATGCGACGGAG+AGG | 0.721831 | 4_1:+54811262 | None:intergenic |
| AGTCTTAGGAGACGTAACGA+CGG | 0.740227 | 4_1:+54805546 | None:intergenic |
| GATACTAACTGATCACCACG+TGG | 0.760957 | 4_1:+54805519 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTTATAAACTATTCT+TGG | - | chr4_1:54802560-54802579 | Msa0556550:intron | 10.0% |
| !! | TATGACAAAAAAAAAAATTA+AGG | + | chr4_1:54804156-54804175 | None:intergenic | 10.0% |
| !!! | TTTTTTAACAAAAAAATAAC+AGG | - | chr4_1:54804429-54804448 | Msa0556550:intron | 10.0% |
| !!! | TTTTTAACAAAAAAATAACA+GGG | - | chr4_1:54804430-54804449 | Msa0556550:intron | 10.0% |
| !! | ATATATAACTACAATATAAA+GGG | + | chr4_1:54805157-54805176 | None:intergenic | 10.0% |
| !! | AAAAAATTAAATACACAAAT+AGG | + | chr4_1:54805454-54805473 | None:intergenic | 10.0% |
| !!! | ATTTGTGTATTTAATTTTTT+TGG | - | chr4_1:54805454-54805473 | Msa0556550:intron | 10.0% |
| !! | ATATAAATTCATTAAATGAT+AGG | - | chr4_1:54806321-54806340 | Msa0556550:intron | 10.0% |
| !!! | ATTTTTCTTAAAATTTGTAA+AGG | + | chr4_1:54806472-54806491 | None:intergenic | 10.0% |
| !! | TATAATACTATATATTGTAT+AGG | + | chr4_1:54808117-54808136 | None:intergenic | 10.0% |
| !! | TTTAATAAGTATTTAATACT+TGG | - | chr4_1:54808470-54808489 | Msa0556550:intron | 10.0% |
| !! | TTAATAAGTATTTAATACTT+GGG | - | chr4_1:54808471-54808490 | Msa0556550:intron | 10.0% |
| !!! | TTTTAAATATAATCTATAGT+TGG | + | chr4_1:54810494-54810513 | None:intergenic | 10.0% |
| !!! | GGAAAAATATTAACTTTTTA+TGG | - | chr4_1:54802443-54802462 | Msa0556550:CDS | 15.0% |
| !!! | TTATCTTTTTAACAAAAGTT+GGG | + | chr4_1:54802487-54802506 | None:intergenic | 15.0% |
| !! | ATAAAAATTATCTTGAATCA+AGG | + | chr4_1:54802550-54802569 | None:intergenic | 15.0% |
| !!! | AAATATGATAATTTTTAGTG+TGG | - | chr4_1:54802902-54802921 | Msa0556550:intron | 15.0% |
| !!! | AATCTTTTTACAATGTTTTT+TGG | + | chr4_1:54803485-54803504 | None:intergenic | 15.0% |
| !! | TTACAATAAAAAAGATATTG+AGG | - | chr4_1:54803657-54803676 | Msa0556550:intron | 15.0% |
| !!! | TTTTTCAACAACAAAAAATA+CGG | - | chr4_1:54804035-54804054 | Msa0556550:intron | 15.0% |
| !! | TTCAAGTAAAATCTTAATAA+AGG | - | chr4_1:54804987-54805006 | Msa0556550:intron | 15.0% |
| !! | TATATAACTACAATATAAAG+GGG | + | chr4_1:54805156-54805175 | None:intergenic | 15.0% |
| !! | CATATATAACTACAATATAA+AGG | + | chr4_1:54805158-54805177 | None:intergenic | 15.0% |
| !!! | ACATAATTATGATTTTTTTG+AGG | + | chr4_1:54805773-54805792 | None:intergenic | 15.0% |
| !! | TGTATTACATGAAAAATTAT+TGG | - | chr4_1:54807183-54807202 | Msa0556550:intron | 15.0% |
| !!! | AAATTGAAAATGTTTTTGAA+AGG | + | chr4_1:54807325-54807344 | None:intergenic | 15.0% |
| !!! | AAATTTGCATTTATATTTTC+TGG | + | chr4_1:54809606-54809625 | None:intergenic | 15.0% |
| !!! | ATTTGAATTTGAATACTTTT+TGG | - | chr4_1:54810651-54810670 | Msa0556550:intron | 15.0% |
| !!! | TTTGAATTTGAATACTTTTT+GGG | - | chr4_1:54810652-54810671 | Msa0556550:intron | 15.0% |
| !!! | AATTGTTCTAAACAAGAAAT+GGG | + | chr4_1:54801087-54801106 | None:intergenic | 20.0% |
| !!! | ATGCATTATTGTTTTTGTTA+TGG | - | chr4_1:54801519-54801538 | Msa0556550:intron | 20.0% |
| !!! | CATCTTTTTAATTTTTCTGA+TGG | + | chr4_1:54801761-54801780 | None:intergenic | 20.0% |
| !!! | ACTTGTTTGATAAACTTTTT+GGG | - | chr4_1:54802013-54802032 | Msa0556550:CDS | 20.0% |
| !!! | CTTATCTTTTTAACAAAAGT+TGG | + | chr4_1:54802488-54802507 | None:intergenic | 20.0% |
| !! | AAATATACTAGCAAATATAG+AGG | + | chr4_1:54803251-54803270 | None:intergenic | 20.0% |
| !! | TCAATAAAAGAATCCTAATT+TGG | + | chr4_1:54803462-54803481 | None:intergenic | 20.0% |
| !!! | ATAAGTACTTTCACATTTTT+TGG | + | chr4_1:54803787-54803806 | None:intergenic | 20.0% |
| !! | TATCTCATAACTTAATGATT+GGG | + | chr4_1:54804597-54804616 | None:intergenic | 20.0% |
| !! | TTATCTCATAACTTAATGAT+TGG | + | chr4_1:54804598-54804617 | None:intergenic | 20.0% |
| !!! | TTTTCGTTCTTTAATTTTGT+CGG | - | chr4_1:54805249-54805268 | Msa0556550:intron | 20.0% |
| !! | CAAATAAGAACAGAATAAAA+TGG | + | chr4_1:54805910-54805929 | None:intergenic | 20.0% |
| !! | AAAACAATGTGTTAAAAACA+AGG | + | chr4_1:54806075-54806094 | None:intergenic | 20.0% |
| !!! | TAAAATTTGTAAAGGTACAT+CGG | + | chr4_1:54806464-54806483 | None:intergenic | 20.0% |
| !! | AAAAAGATAGAAAGGATAAA+TGG | + | chr4_1:54808069-54808088 | None:intergenic | 20.0% |
| !! | ATTATTGGAAAAAGATAGAA+AGG | + | chr4_1:54808077-54808096 | None:intergenic | 20.0% |
| !!! | ATTAGTCTTGTTGAAATTAT+TGG | + | chr4_1:54808092-54808111 | None:intergenic | 20.0% |
| !! | AATGACATTGTTGAAATTTA+AGG | + | chr4_1:54809474-54809493 | None:intergenic | 20.0% |
| !!! | AATGTAACCATTTTTTCTTT+TGG | - | chr4_1:54809655-54809674 | Msa0556550:intron | 20.0% |
| !! | TTGAATGACTAACATTATAT+TGG | - | chr4_1:54809732-54809751 | Msa0556550:intron | 20.0% |
| !! | TTCTACATGATTTGATTATT+TGG | + | chr4_1:54809793-54809812 | None:intergenic | 20.0% |
| !! | CATAGTAATCATGTTAAATA+AGG | + | chr4_1:54810026-54810045 | None:intergenic | 20.0% |
| !! | TATACTGTATATGATATTAG+TGG | - | chr4_1:54810084-54810103 | Msa0556550:intron | 20.0% |
| !! | AAATGTAAATTGCAGTTTAA+AGG | + | chr4_1:54810295-54810314 | None:intergenic | 20.0% |
| !!! | TTTTTAATTAGTTTTTGGCA+TGG | - | chr4_1:54810457-54810476 | Msa0556550:intron | 20.0% |
| !! | GTTCTTTGTAGAATTTATTT+AGG | - | chr4_1:54811210-54811229 | Msa0556550:CDS | 20.0% |
| !! | TTCATTCTTTTCCATTTCAA+AGG | - | chr4_1:54800956-54800975 | Msa0556550:three_prime_UTR | 25.0% |
| ! | GAATAGAGTAGAAAGAATAA+TGG | + | chr4_1:54801022-54801041 | None:intergenic | 25.0% |
| ! | TTCTTTCTACTCTATTCAAA+TGG | - | chr4_1:54801025-54801044 | Msa0556550:three_prime_UTR | 25.0% |
| !! | GAATTGTTCTAAACAAGAAA+TGG | + | chr4_1:54801088-54801107 | None:intergenic | 25.0% |
| !!! | TAATGTCTTCTAGAATGTTT+TGG | - | chr4_1:54801934-54801953 | Msa0556550:intron | 25.0% |
| ! | CCAACATAATTAAAATTCAC+AGG | + | chr4_1:54801992-54802011 | None:intergenic | 25.0% |
| !!! | CCTGTGAATTTTAATTATGT+TGG | - | chr4_1:54801989-54802008 | Msa0556550:CDS | 25.0% |
| !! | CACTTGTTTGATAAACTTTT+TGG | - | chr4_1:54802012-54802031 | Msa0556550:CDS | 25.0% |
| ! | GAAAAACCAATCAAAATAAG+AGG | + | chr4_1:54802088-54802107 | None:intergenic | 25.0% |
| !!! | TTTGATTGGTTTTTCGTATT+TGG | - | chr4_1:54802093-54802112 | Msa0556550:intron | 25.0% |
| !!! | TTGATTGGTTTTTCGTATTT+GGG | - | chr4_1:54802094-54802113 | Msa0556550:intron | 25.0% |
| ! | TTCGCAAAAATTTATGATCA+TGG | - | chr4_1:54802295-54802314 | Msa0556550:intron | 25.0% |
| !!! | ATGATCATGGATCAATTTTT+TGG | - | chr4_1:54802308-54802327 | Msa0556550:intron | 25.0% |
| ! | ATAACAACATCAAAGAAACA+AGG | + | chr4_1:54802365-54802384 | None:intergenic | 25.0% |
| ! | TTTACATTGAAGAAACTTTG+CGG | - | chr4_1:54802781-54802800 | Msa0556550:intron | 25.0% |
| ! | AATTTGATATCTTACCATCA+TGG | + | chr4_1:54803225-54803244 | None:intergenic | 25.0% |
| ! | ATTACCATGAAAGATCAAAT+AGG | + | chr4_1:54803279-54803298 | None:intergenic | 25.0% |
| !! | ATGGTCTTAATCAAAACATA+AGG | + | chr4_1:54803425-54803444 | None:intergenic | 25.0% |
| ! | CATCAGTAAACACTTATTAT+AGG | - | chr4_1:54803612-54803631 | Msa0556550:intron | 25.0% |
| !!! | AAAGCGTTTAAAACAGTTTT+TGG | - | chr4_1:54803731-54803750 | Msa0556550:intron | 25.0% |
| !!! | AAGCGTTTAAAACAGTTTTT+GGG | - | chr4_1:54803732-54803751 | Msa0556550:intron | 25.0% |
| ! | TTCTTAAGTTAATCAAAAGC+TGG | - | chr4_1:54803873-54803892 | Msa0556550:intron | 25.0% |
| ! | CAACATAAGTACAGTTAATA+CGG | - | chr4_1:54803905-54803924 | Msa0556550:intron | 25.0% |
| !! | GCAAATATAATAATTTGTCG+TGG | - | chr4_1:54804083-54804102 | Msa0556550:intron | 25.0% |
| !! | TTTTACAGAACAAACAACAA+TGG | - | chr4_1:54804403-54804422 | Msa0556550:intron | 25.0% |
| ! | TTTACAGAACAAACAACAAT+GGG | - | chr4_1:54804404-54804423 | Msa0556550:intron | 25.0% |
| ! | AGAAGACAAATATATATGAC+AGG | - | chr4_1:54804552-54804571 | Msa0556550:intron | 25.0% |
| ! | GAAGACAAATATATATGACA+GGG | - | chr4_1:54804553-54804572 | Msa0556550:intron | 25.0% |
| !! | TTGATTTTTAACCTAGCTAA+AGG | + | chr4_1:54804627-54804646 | None:intergenic | 25.0% |
| ! | TTAGCTAGGTTAAAAATCAA+AGG | - | chr4_1:54804627-54804646 | Msa0556550:CDS | 25.0% |
| ! | TAGCTAGGTTAAAAATCAAA+GGG | - | chr4_1:54804628-54804647 | Msa0556550:CDS | 25.0% |
| ! | TTACATAAACTCAATATCCT+TGG | + | chr4_1:54804743-54804762 | None:intergenic | 25.0% |
| ! | ATCAATGAATATAGTGTCAT+AGG | - | chr4_1:54804774-54804793 | Msa0556550:intron | 25.0% |
| !! | AAACAAAGTTTTACTGCTAA+AGG | - | chr4_1:54805059-54805078 | Msa0556550:intron | 25.0% |
| ! | ATTGTAGTTATATATGCACA+AGG | - | chr4_1:54805162-54805181 | Msa0556550:intron | 25.0% |
| ! | TTGTAGTTATATATGCACAA+GGG | - | chr4_1:54805163-54805182 | Msa0556550:intron | 25.0% |
| ! | GACAGGTTATTTATTGAAAA+AGG | - | chr4_1:54805297-54805316 | Msa0556550:intron | 25.0% |
| ! | TAGACTATATGAACATCAAA+AGG | + | chr4_1:54805567-54805586 | None:intergenic | 25.0% |
| !! | TTTTGATGTTCATATAGTCT+AGG | - | chr4_1:54805566-54805585 | Msa0556550:CDS | 25.0% |
| ! | CAATAAAAATGAGAAAGAAC+AGG | + | chr4_1:54805806-54805825 | None:intergenic | 25.0% |
| ! | TAATGATGCTTTGATTCAAT+TGG | - | chr4_1:54805945-54805964 | Msa0556550:intron | 25.0% |
| !! | ATACTTAATACTGTGTTTTG+TGG | - | chr4_1:54805981-54806000 | Msa0556550:intron | 25.0% |
| ! | TAAAAACAAGGTCAAAGAAT+CGG | + | chr4_1:54806063-54806082 | None:intergenic | 25.0% |
| ! | GTCTTTAATAGTTTCAAGAT+AGG | - | chr4_1:54806417-54806436 | Msa0556550:intron | 25.0% |
| ! | TAATAGTTTCAAGATAGGAA+TGG | - | chr4_1:54806422-54806441 | Msa0556550:intron | 25.0% |
| !! | ATAGTAGTACACTTTTCATT+TGG | + | chr4_1:54806509-54806528 | None:intergenic | 25.0% |
| ! | TTAGTATCAGACTTAATTTC+TGG | - | chr4_1:54806871-54806890 | Msa0556550:intron | 25.0% |
| ! | AAGTTTAGAGATTAATGAGT+TGG | - | chr4_1:54807048-54807067 | Msa0556550:intron | 25.0% |
| ! | GTTCTATCATAAACCATATT+TGG | + | chr4_1:54807076-54807095 | None:intergenic | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | - | chr4_1:54807080-54807099 | Msa0556550:intron | 25.0% |
| ! | CAATAACTTAAAATGAACAC+GGG | + | chr4_1:54807361-54807380 | None:intergenic | 25.0% |
| ! | GCAATAACTTAAAATGAACA+CGG | + | chr4_1:54807362-54807381 | None:intergenic | 25.0% |
| ! | AAAGATATGAAAAACTCATG+TGG | - | chr4_1:54807382-54807401 | Msa0556550:intron | 25.0% |
| ! | TGTAATAGAGAGAATATAGA+AGG | - | chr4_1:54807413-54807432 | Msa0556550:intron | 25.0% |
| !! | AACAATGACAACATTGTTTT+TGG | - | chr4_1:54807463-54807482 | Msa0556550:intron | 25.0% |
| ! | TATTGTAAAAGAAAATGCTG+AGG | - | chr4_1:54807517-54807536 | Msa0556550:intron | 25.0% |
| ! | ATTGTAAAAGAAAATGCTGA+GGG | - | chr4_1:54807518-54807537 | Msa0556550:intron | 25.0% |
| ! | TCTCATATGTTTATTAGTTG+AGG | - | chr4_1:54807558-54807577 | Msa0556550:intron | 25.0% |
| ! | CTCATATGTTTATTAGTTGA+GGG | - | chr4_1:54807559-54807578 | Msa0556550:intron | 25.0% |
| ! | TTTATTAGTTGAGGGAAAAA+AGG | - | chr4_1:54807567-54807586 | Msa0556550:intron | 25.0% |
| ! | AAAAAGGAGAACATGAAAAA+TGG | - | chr4_1:54807583-54807602 | Msa0556550:intron | 25.0% |
| ! | AAAAGGAGAACATGAAAAAT+GGG | - | chr4_1:54807584-54807603 | Msa0556550:intron | 25.0% |
| ! | GATTACAATCAAACAAGTAA+AGG | + | chr4_1:54807621-54807640 | None:intergenic | 25.0% |
| !!! | CATCTTTTTTTTTCCTCAAT+AGG | - | chr4_1:54807684-54807703 | Msa0556550:intron | 25.0% |
| !!! | TTTTTTTTTCCTCAATAGGA+TGG | - | chr4_1:54807688-54807707 | Msa0556550:intron | 25.0% |
| ! | TCATAAAATGATGTTCCAAA+GGG | + | chr4_1:54807835-54807854 | None:intergenic | 25.0% |
| ! | TTCATAAAATGATGTTCCAA+AGG | + | chr4_1:54807836-54807855 | None:intergenic | 25.0% |
| ! | ACATGAGTAAAAATTGAACA+AGG | - | chr4_1:54807856-54807875 | Msa0556550:intron | 25.0% |
| !!! | TGATTACCTATTGATTTCAA+AGG | + | chr4_1:54807937-54807956 | None:intergenic | 25.0% |
| ! | ATCAGATCTGTTAGTATATT+AGG | - | chr4_1:54807953-54807972 | Msa0556550:intron | 25.0% |
| !!! | ATTAGAAGTCTTATTATGTC+AGG | - | chr4_1:54807986-54808005 | Msa0556550:intron | 25.0% |
| !! | AGATTTTACAAATAGGGTAT+TGG | + | chr4_1:54808040-54808059 | None:intergenic | 25.0% |
| !! | CAGAACAGATTTTACAAATA+GGG | + | chr4_1:54808046-54808065 | None:intergenic | 25.0% |
| ! | GTAATGATGATTCATTAGTT+TGG | + | chr4_1:54808377-54808396 | None:intergenic | 25.0% |
| !!! | AATCACTGTTTTGTTTTCAA+GGG | - | chr4_1:54808419-54808438 | Msa0556550:intron | 25.0% |
| ! | TTCACTAGTAAATAATGTTC+TGG | - | chr4_1:54808591-54808610 | Msa0556550:intron | 25.0% |
| !! | TACTCTTTTCTTTCTGTTTT+TGG | - | chr4_1:54808947-54808966 | Msa0556550:intron | 25.0% |
| !!! | TTGATAAGAGTCTTTTAAAG+AGG | - | chr4_1:54809142-54809161 | Msa0556550:intron | 25.0% |
| !! | TTGATAAGAGTCTTATAAAG+AGG | - | chr4_1:54809403-54809422 | Msa0556550:intron | 25.0% |
| ! | TCCTTCTGTAATCAAATAAT+TGG | - | chr4_1:54809506-54809525 | Msa0556550:intron | 25.0% |
| ! | CCTTCTGTAATCAAATAATT+GGG | - | chr4_1:54809507-54809526 | Msa0556550:intron | 25.0% |
| ! | CTTCTGTAATCAAATAATTG+GGG | - | chr4_1:54809508-54809527 | Msa0556550:intron | 25.0% |
| ! | AAATGAGCCAAAAGAAAAAA+TGG | + | chr4_1:54809665-54809684 | None:intergenic | 25.0% |
| !!! | CTCATTTTCTTTTTGCTTTT+TGG | - | chr4_1:54809678-54809697 | Msa0556550:intron | 25.0% |
| ! | TAGTTTCCAAAACAATACTA+AGG | + | chr4_1:54809711-54809730 | None:intergenic | 25.0% |
| ! | ATGACTAACATTATATTGGA+TGG | - | chr4_1:54809736-54809755 | Msa0556550:intron | 25.0% |
| ! | AATGGTTAAAATGTTCTCAT+TGG | - | chr4_1:54809989-54810008 | Msa0556550:intron | 25.0% |
| !!! | TTTTTTGCAATTTTCTTTGC+AGG | - | chr4_1:54810147-54810166 | Msa0556550:intron | 25.0% |
| !! | AGAGTGTTTAAAATTATGAC+AGG | - | chr4_1:54810320-54810339 | Msa0556550:intron | 25.0% |
| ! | CTGAATTCATAATTGTACTT+TGG | - | chr4_1:54810738-54810757 | Msa0556550:intron | 25.0% |
| ! | AATAAACTTCCGTAAATGTT+TGG | - | chr4_1:54810790-54810809 | Msa0556550:intron | 25.0% |
| ! | TTACAATGTTAGATGTATTG+TGG | + | chr4_1:54810840-54810859 | None:intergenic | 25.0% |
| !!! | GCGATGAAAACATTTTTTTT+TGG | - | chr4_1:54811167-54811186 | Msa0556550:intron | 25.0% |
| ! | CTTTGTAGAATTTATTTAGG+TGG | - | chr4_1:54811213-54811232 | Msa0556550:CDS | 25.0% |
| CGAAAGAAGAATAAAAAGCA+CGG | + | chr4_1:54801256-54801275 | None:intergenic | 30.0% | |
| TCTTTGGATTCACATAAAGA+TGG | - | chr4_1:54801321-54801340 | Msa0556550:three_prime_UTR | 30.0% | |
| !! | GTTTTTGTTATGGTCATGTT+TGG | - | chr4_1:54801529-54801548 | Msa0556550:intron | 30.0% |
| AGAAACAATAGCACATTGTT+GGG | + | chr4_1:54801903-54801922 | None:intergenic | 30.0% | |
| AAGAAACAATAGCACATTGT+TGG | + | chr4_1:54801904-54801923 | None:intergenic | 30.0% | |
| TACTTTGCTGCTGATAAATT+TGG | - | chr4_1:54802047-54802066 | Msa0556550:intron | 30.0% | |
| AACCAATCAAAATAAGAGGA+AGG | + | chr4_1:54802084-54802103 | None:intergenic | 30.0% | |
| !!! | TGATTGGTTTTTCGTATTTG+GGG | - | chr4_1:54802095-54802114 | Msa0556550:intron | 30.0% |
| !! | ATTTTGCTATCAAACCAATG+TGG | + | chr4_1:54802155-54802174 | None:intergenic | 30.0% |
| TATTCTGATCTCTGATATGA+AGG | - | chr4_1:54802382-54802401 | Msa0556550:intron | 30.0% | |
| ATTCTGATCTCTGATATGAA+GGG | - | chr4_1:54802383-54802402 | Msa0556550:intron | 30.0% | |
| ATTCAGAAAAGTCTTGATGA+GGG | + | chr4_1:54802418-54802437 | None:intergenic | 30.0% | |
| AATTCAGAAAAGTCTTGATG+AGG | + | chr4_1:54802419-54802438 | None:intergenic | 30.0% | |
| ! | CAAGACTTTTCTGAATTTTG+TGG | - | chr4_1:54802422-54802441 | Msa0556550:intron | 30.0% |
| AAGTTGGGCATTAAAATTAG+TGG | + | chr4_1:54802472-54802491 | None:intergenic | 30.0% | |
| TCTTGGAATGAAAATTTGTG+AGG | - | chr4_1:54802577-54802596 | Msa0556550:intron | 30.0% | |
| GACAAATGGTTTACATGATA+AGG | + | chr4_1:54802615-54802634 | None:intergenic | 30.0% | |
| ! | TTTTTGTCCTCAATCAAGAA+AGG | - | chr4_1:54802806-54802825 | Msa0556550:intron | 30.0% |
| ! | TTTTTCTCCTTTCTTGATTG+AGG | + | chr4_1:54802816-54802835 | None:intergenic | 30.0% |
| TCATGCAAATCAATGCATAA+TGG | + | chr4_1:54803062-54803081 | None:intergenic | 30.0% | |
| TGTGAGGATGACAAATTTAA+AGG | + | chr4_1:54803098-54803117 | None:intergenic | 30.0% | |
| ! | TTTTCACACAGATAAATGTG+AGG | + | chr4_1:54803114-54803133 | None:intergenic | 30.0% |
| TATACTAGCAAATATAGAGG+CGG | + | chr4_1:54803248-54803267 | None:intergenic | 30.0% | |
| !!! | TGTTTTGATTAAGACCATGT+TGG | - | chr4_1:54803427-54803446 | Msa0556550:intron | 30.0% |
| !! | TTGGTTTTCTGAACCAAATT+AGG | - | chr4_1:54803446-54803465 | Msa0556550:intron | 30.0% |
| AATGACAATATAGATGCTGT+GGG | - | chr4_1:54803524-54803543 | Msa0556550:intron | 30.0% | |
| !! | AAAGATGATATGATGGACTT+AGG | - | chr4_1:54803561-54803580 | Msa0556550:intron | 30.0% |
| !! | AAGATGATATGATGGACTTA+GGG | - | chr4_1:54803562-54803581 | Msa0556550:intron | 30.0% |
| GTAAACACTTATTATAGGAG+AGG | - | chr4_1:54803617-54803636 | Msa0556550:intron | 30.0% | |
| !! | GTTGTTTCTATAAGCTATCT+TGG | - | chr4_1:54803697-54803716 | Msa0556550:intron | 30.0% |
| GAAATGCATTTCCAACTTTA+GGG | + | chr4_1:54803856-54803875 | None:intergenic | 30.0% | |
| AGAAATGCATTTCCAACTTT+AGG | + | chr4_1:54803857-54803876 | None:intergenic | 30.0% | |
| TGTTGAAAAAAACATCGAAG+TGG | + | chr4_1:54804025-54804044 | None:intergenic | 30.0% | |
| AAAAAAATTAAGGCCAAGTC+TGG | + | chr4_1:54804146-54804165 | None:intergenic | 30.0% | |
| ACAGAAAAGATAGTTCACTT+CGG | + | chr4_1:54804356-54804375 | None:intergenic | 30.0% | |
| GTACTAATGCATTCATATTG+TGG | - | chr4_1:54804508-54804527 | Msa0556550:intron | 30.0% | |
| TAGGTTAAAAATCAAAGGGA+TGG | - | chr4_1:54804632-54804651 | Msa0556550:CDS | 30.0% | |
| AGGTTAAAAATCAAAGGGAT+GGG | - | chr4_1:54804633-54804652 | Msa0556550:CDS | 30.0% | |
| TAACTATTGATGCTTTCCAA+GGG | + | chr4_1:54804669-54804688 | None:intergenic | 30.0% | |
| TTAACTATTGATGCTTTCCA+AGG | + | chr4_1:54804670-54804689 | None:intergenic | 30.0% | |
| AACTCAATATCCTTGGTTAT+CGG | + | chr4_1:54804736-54804755 | None:intergenic | 30.0% | |
| AATGAATATAGTGTCATAGG+AGG | - | chr4_1:54804777-54804796 | Msa0556550:intron | 30.0% | |
| GAAATGTAAGTTAGACTCTA+GGG | + | chr4_1:54804907-54804926 | None:intergenic | 30.0% | |
| AGAAATGTAAGTTAGACTCT+AGG | + | chr4_1:54804908-54804927 | None:intergenic | 30.0% | |
| ! | AAGATTTTACTTGAACAGAG+AGG | + | chr4_1:54804982-54805001 | None:intergenic | 30.0% |
| ! | AAAGGAATCCTTTTCATTTC+AGG | - | chr4_1:54805005-54805024 | Msa0556550:intron | 30.0% |
| ATGGAATTCCTGAAATGAAA+AGG | + | chr4_1:54805016-54805035 | None:intergenic | 30.0% | |
| AGGGGTTTAAATTCTGATAT+AGG | + | chr4_1:54805138-54805157 | None:intergenic | 30.0% | |
| CGATACTGTTATCATAACTT+GGG | + | chr4_1:54805278-54805297 | None:intergenic | 30.0% | |
| TCGATACTGTTATCATAACT+TGG | + | chr4_1:54805279-54805298 | None:intergenic | 30.0% | |
| GGTCAAAGTGAATTTATTTG+GGG | + | chr4_1:54805483-54805502 | None:intergenic | 30.0% | |
| GGGTCAAAGTGAATTTATTT+GGG | + | chr4_1:54805484-54805503 | None:intergenic | 30.0% | |
| AGGGTCAAAGTGAATTTATT+TGG | + | chr4_1:54805485-54805504 | None:intergenic | 30.0% | |
| ATAGTCTAGGCTAATTCATT+CGG | - | chr4_1:54805579-54805598 | Msa0556550:CDS | 30.0% | |
| GATAATAATCTCAACTGCTT+TGG | - | chr4_1:54805641-54805660 | Msa0556550:intron | 30.0% | |
| !!! | ATTTTTTTGAGGCAACAAGA+GGG | + | chr4_1:54805762-54805781 | None:intergenic | 30.0% |
| TTCTAAGCAGATAGATATTG+TGG | + | chr4_1:54805857-54805876 | None:intergenic | 30.0% | |
| ATCTATCTGCTTAGAATTGT+AGG | - | chr4_1:54805861-54805880 | Msa0556550:intron | 30.0% | |
| AAGAACAGAATAAAATGGCA+AGG | + | chr4_1:54805905-54805924 | None:intergenic | 30.0% | |
| ! | TGTTCTTATTTGTCTCACTT+TGG | - | chr4_1:54805918-54805937 | Msa0556550:intron | 30.0% |
| AAAAACAAGGTCAAAGAATC+GGG | + | chr4_1:54806062-54806081 | None:intergenic | 30.0% | |
| TTCATTAAATGATAGGTTCC+AGG | - | chr4_1:54806328-54806347 | Msa0556550:intron | 30.0% | |
| AAGTGTTATGTCATAACGAA+CGG | + | chr4_1:54806566-54806585 | None:intergenic | 30.0% | |
| ATGAACTCTGTTACTGAAAA+GGG | - | chr4_1:54806620-54806639 | Msa0556550:intron | 30.0% | |
| AGAGACAATCATTAGTGAAA+GGG | + | chr4_1:54806752-54806771 | None:intergenic | 30.0% | |
| AAGAGACAATCATTAGTGAA+AGG | + | chr4_1:54806753-54806772 | None:intergenic | 30.0% | |
| TCTGAAAAAAGTCTTTGTCT+GGG | + | chr4_1:54806801-54806820 | None:intergenic | 30.0% | |
| ATCTGAAAAAAGTCTTTGTC+TGG | + | chr4_1:54806802-54806821 | None:intergenic | 30.0% | |
| ATGTACTAGCTAATGATTTC+TGG | - | chr4_1:54806903-54806922 | Msa0556550:intron | 30.0% | |
| AACTCAGAAAGTAGTAGAAA+CGG | + | chr4_1:54807019-54807038 | None:intergenic | 30.0% | |
| ACTACTTTCTGAGTTCTATT+AGG | - | chr4_1:54807024-54807043 | Msa0556550:intron | 30.0% | |
| ! | TAATGAGTTGGATCCAAATA+TGG | - | chr4_1:54807060-54807079 | Msa0556550:intron | 30.0% |
| TTATTGGTACAACCATATAC+TGG | - | chr4_1:54807199-54807218 | Msa0556550:intron | 30.0% | |
| CATGAAAAATGGGAAGTAAA+CGG | - | chr4_1:54807594-54807613 | Msa0556550:intron | 30.0% | |
| ! | AACTACTTTGTTACTTGGAA+CGG | + | chr4_1:54807646-54807665 | None:intergenic | 30.0% |
| GAGTAAACTACTTTGTTACT+TGG | + | chr4_1:54807651-54807670 | None:intergenic | 30.0% | |
| ! | GCAGAACAGATTTTACAAAT+AGG | + | chr4_1:54808047-54808066 | None:intergenic | 30.0% |
| GATAGACTAAAGTTTAAGTC+CGG | - | chr4_1:54808194-54808213 | Msa0556550:intron | 30.0% | |
| TTCCTGAAATTTACACGTAA+TGG | - | chr4_1:54808217-54808236 | Msa0556550:intron | 30.0% | |
| TCCTGAAATTTACACGTAAT+GGG | - | chr4_1:54808218-54808237 | Msa0556550:intron | 30.0% | |
| ACAACTAATTGAAGTGTACA+AGG | - | chr4_1:54808257-54808276 | Msa0556550:intron | 30.0% | |
| CAACTAATTGAAGTGTACAA+GGG | - | chr4_1:54808258-54808277 | Msa0556550:intron | 30.0% | |
| !!! | GAATCACTGTTTTGTTTTCA+AGG | - | chr4_1:54808418-54808437 | Msa0556550:intron | 30.0% |
| TTTGTACATACAGGAGTTAA+TGG | - | chr4_1:54808499-54808518 | Msa0556550:intron | 30.0% | |
| GTGCAATTGATCAGTAAATT+TGG | - | chr4_1:54808541-54808560 | Msa0556550:intron | 30.0% | |
| ! | ATTGATCAGTAAATTTGGTG+AGG | - | chr4_1:54808546-54808565 | Msa0556550:intron | 30.0% |
| CTTATAACTGAATGTTGATG+TGG | - | chr4_1:54808845-54808864 | Msa0556550:intron | 30.0% | |
| ! | AGAAAAGAGTATACACAGAT+AGG | + | chr4_1:54808938-54808957 | None:intergenic | 30.0% |
| ! | TGTATTTTCTGTATGTCTGT+TGG | - | chr4_1:54808997-54809016 | Msa0556550:intron | 30.0% |
| !! | ATAAGAGTCTTTTAAAGAGG+AGG | - | chr4_1:54809145-54809164 | Msa0556550:intron | 30.0% |
| ! | ATAAGAGTCTTATAAAGAGG+AGG | - | chr4_1:54809406-54809425 | Msa0556550:intron | 30.0% |
| CCCAATTATTTGATTACAGA+AGG | + | chr4_1:54809510-54809529 | None:intergenic | 30.0% | |
| CAGTATAGGTACAATTAATG+TGG | + | chr4_1:54809577-54809596 | None:intergenic | 30.0% | |
| CACATTAATTGTACCTATAC+TGG | - | chr4_1:54809575-54809594 | Msa0556550:intron | 30.0% | |
| ! | GCAGAAATATATGCAGTTTT+TGG | + | chr4_1:54809634-54809653 | None:intergenic | 30.0% |
| AATGTGCCTATTCAAATAAG+TGG | + | chr4_1:54809884-54809903 | None:intergenic | 30.0% | |
| ACTTATTTGAATAGGCACAT+TGG | - | chr4_1:54809883-54809902 | Msa0556550:intron | 30.0% | |
| TAATACGATCCTCTTTGATT+TGG | + | chr4_1:54809931-54809950 | None:intergenic | 30.0% | |
| GGGTAAAGTTATTCATGTAA+TGG | - | chr4_1:54809971-54809990 | Msa0556550:intron | 30.0% | |
| TACAGTATAGTTTCGAACAA+GGG | + | chr4_1:54810073-54810092 | None:intergenic | 30.0% | |
| ATACAGTATAGTTTCGAACA+AGG | + | chr4_1:54810074-54810093 | None:intergenic | 30.0% | |
| TGCAAAAAAAATCACCATGT+CGG | + | chr4_1:54810136-54810155 | None:intergenic | 30.0% | |
| ! | AAGAGATCTTTTACAGTGAA+TGG | + | chr4_1:54810381-54810400 | None:intergenic | 30.0% |
| TTGAAAATTCAAACTGCCTT+GGG | + | chr4_1:54810430-54810449 | None:intergenic | 30.0% | |
| ATTGAAAATTCAAACTGCCT+TGG | + | chr4_1:54810431-54810450 | None:intergenic | 30.0% | |
| CAGAAATGCTAGAATATCTT+GGG | + | chr4_1:54810721-54810740 | None:intergenic | 30.0% | |
| TCAGAAATGCTAGAATATCT+TGG | + | chr4_1:54810722-54810741 | None:intergenic | 30.0% | |
| TTAAATTGTGTACACTGTAC+AGG | - | chr4_1:54810862-54810881 | Msa0556550:intron | 30.0% | |
| TGAAGTTCATTGAGATATCA+GGG | - | chr4_1:54811001-54811020 | Msa0556550:CDS | 30.0% | |
| TAGAGCAGAGATACTTAAAA+TGG | - | chr4_1:54811034-54811053 | Msa0556550:CDS | 30.0% | |
| TCTACAAAGAACCATCAATT+TGG | + | chr4_1:54811202-54811221 | None:intergenic | 30.0% | |
| GTAGTAGGAAAATGACAAAT+TGG | - | chr4_1:54811262-54811281 | Msa0556550:CDS | 30.0% | |
| AACGTATACATAACTTCAAG+AGG | - | chr4_1:54811362-54811381 | Msa0556550:five_prime_UTR | 30.0% | |
| TATACATAACTTCAAGAGGA+TGG | - | chr4_1:54811366-54811385 | Msa0556550:five_prime_UTR | 30.0% | |
| ! | GAATTTTGCAGTTTCAGTGT+CGG | + | chr4_1:54800939-54800958 | None:intergenic | 35.0% |
| TCTTTCGTTAAAAGCTTCGT+TGG | - | chr4_1:54801269-54801288 | Msa0556550:three_prime_UTR | 35.0% | |
| ! | GGGTTTTTGTAGTGTATCTT+TGG | - | chr4_1:54801305-54801324 | Msa0556550:three_prime_UTR | 35.0% |
| AATAAGCATAACTCTGCCAT+TGG | + | chr4_1:54801454-54801473 | None:intergenic | 35.0% | |
| GTAGTATGCTCTATGAATCA+CGG | + | chr4_1:54801487-54801506 | None:intergenic | 35.0% | |
| ACCTTCTACATAGAGTTCAA+AGG | - | chr4_1:54801671-54801690 | Msa0556550:intron | 35.0% | |
| CCTTCTACATAGAGTTCAAA+GGG | - | chr4_1:54801672-54801691 | Msa0556550:intron | 35.0% | |
| AATGTTGTGTTTACGAGGAT+CGG | - | chr4_1:54801730-54801749 | Msa0556550:intron | 35.0% | |
| ! | CTACTAGCATAAGTTTTGCA+TGG | + | chr4_1:54801856-54801875 | None:intergenic | 35.0% |
| GGTGAATTGTTATGCATTTG+CGG | - | chr4_1:54801955-54801974 | Msa0556550:intron | 35.0% | |
| !!! | TGCCTTCCTCTTATTTTGAT+TGG | - | chr4_1:54802079-54802098 | Msa0556550:intron | 35.0% |
| TGATCATTGTTGATCCACAT+TGG | - | chr4_1:54802138-54802157 | Msa0556550:intron | 35.0% | |
| ! | TTGATAGCAAAATTGCACCA+TGG | - | chr4_1:54802162-54802181 | Msa0556550:intron | 35.0% |
| !!! | GGATCAATTTTTTGGCATCT+TGG | - | chr4_1:54802316-54802335 | Msa0556550:intron | 35.0% |
| ! | TTTTAGTGTGGTTGAATGTG+CGG | - | chr4_1:54802914-54802933 | Msa0556550:intron | 35.0% |
| ! | CGGAGAAGTTTCAATTTGTT+TGG | - | chr4_1:54802934-54802953 | Msa0556550:intron | 35.0% |
| CTTGCAGATTATTGATGTTC+TGG | - | chr4_1:54803002-54803021 | Msa0556550:intron | 35.0% | |
| !! | GTATTGTTTCTTTTGCATGC+AGG | - | chr4_1:54803189-54803208 | Msa0556550:intron | 35.0% |
| GTGACCTATTTGATCTTTCA+TGG | - | chr4_1:54803272-54803291 | Msa0556550:intron | 35.0% | |
| CTCAATTTATCATCAACGCA+AGG | + | chr4_1:54803366-54803385 | None:intergenic | 35.0% | |
| ! | TTTGGTTCAGAAAACCAACA+TGG | + | chr4_1:54803444-54803463 | None:intergenic | 35.0% |
| CAATGACAATATAGATGCTG+TGG | - | chr4_1:54803523-54803542 | Msa0556550:intron | 35.0% | |
| GGGCTATAAAGATGATATGA+TGG | - | chr4_1:54803554-54803573 | Msa0556550:intron | 35.0% | |
| !! | AGATGATATGATGGACTTAG+GGG | - | chr4_1:54803563-54803582 | Msa0556550:intron | 35.0% |
| TTAATACGGTCTCTAACGTT+AGG | - | chr4_1:54803919-54803938 | Msa0556550:intron | 35.0% | |
| GTTAGGAGGCTTAATCAATT+AGG | - | chr4_1:54803936-54803955 | Msa0556550:intron | 35.0% | |
| GTTTGAATCCAAATCGTTGA+TGG | + | chr4_1:54803983-54804002 | None:intergenic | 35.0% | |
| TTTAGTCTGAATTCCAGACT+TGG | - | chr4_1:54804130-54804149 | Msa0556550:intron | 35.0% | |
| GATAATTGCATCCTTTAGCT+AGG | - | chr4_1:54804613-54804632 | Msa0556550:CDS | 35.0% | |
| GAATTAAGAGTCTGACGAAA+TGG | + | chr4_1:54805035-54805054 | None:intergenic | 35.0% | |
| !! | TCGTTCTTTAATTTTGTCGG+AGG | - | chr4_1:54805252-54805271 | Msa0556550:intron | 35.0% |
| !! | GTTATGATAACAGTATCGAC+AGG | - | chr4_1:54805280-54805299 | Msa0556550:intron | 35.0% |
| AAAGGCCTAAATGGTTCAAA+GGG | + | chr4_1:54805405-54805424 | None:intergenic | 35.0% | |
| GAGAAATTTGATGAGAACTG+TGG | + | chr4_1:54805432-54805451 | None:intergenic | 35.0% | |
| CAAAGTGAATTTATTTGGGG+AGG | + | chr4_1:54805480-54805499 | None:intergenic | 35.0% | |
| TACCTTATCACCAATAGCAA+GGG | + | chr4_1:54805535-54805554 | None:intergenic | 35.0% | |
| ! | TTCATTCGGATGAAGTACTT+TGG | - | chr4_1:54805593-54805612 | Msa0556550:CDS | 35.0% |
| TACTTTGGTCATCATAAGCT+AGG | - | chr4_1:54805608-54805627 | Msa0556550:intron | 35.0% | |
| AATAATCTCAACTGCTTTGG+TGG | - | chr4_1:54805644-54805663 | Msa0556550:intron | 35.0% | |
| ATAATCTCAACTGCTTTGGT+GGG | - | chr4_1:54805645-54805664 | Msa0556550:intron | 35.0% | |
| ! | TTCCTTGTACTTGTTCCTTT+TGG | - | chr4_1:54805729-54805748 | Msa0556550:intron | 35.0% |
| !!! | GATTTTTTTGAGGCAACAAG+AGG | + | chr4_1:54805763-54805782 | None:intergenic | 35.0% |
| AAATGAGAAAGAACAGGCAT+GGG | + | chr4_1:54805800-54805819 | None:intergenic | 35.0% | |
| AAAATGAGAAAGAACAGGCA+TGG | + | chr4_1:54805801-54805820 | None:intergenic | 35.0% | |
| ATCCCTTATTCAAGCTTCAT+TGG | - | chr4_1:54805828-54805847 | Msa0556550:intron | 35.0% | |
| TCCCTTATTCAAGCTTCATT+GGG | - | chr4_1:54805829-54805848 | Msa0556550:intron | 35.0% | |
| ATGCTTTGATTCAATTGGAC+TGG | - | chr4_1:54805950-54805969 | Msa0556550:intron | 35.0% | |
| TGCTTTGATTCAATTGGACT+GGG | - | chr4_1:54805951-54805970 | Msa0556550:intron | 35.0% | |
| CGGGTAAATCTCAAATCAAA+AGG | + | chr4_1:54806043-54806062 | None:intergenic | 35.0% | |
| AACAAAGTGCGCATGAAATT+AGG | + | chr4_1:54806120-54806139 | None:intergenic | 35.0% | |
| ATAGATTGTGCCTAAAGTTC+TGG | + | chr4_1:54806149-54806168 | None:intergenic | 35.0% | |
| ! | ACTTGCCTCAATGACTTTTA+TGG | + | chr4_1:54806259-54806278 | None:intergenic | 35.0% |
| TTGTGGATTTATATCGTGAC+AGG | - | chr4_1:54806278-54806297 | Msa0556550:intron | 35.0% | |
| !! | TGATTGGAACATTAGCCTTA+AGG | - | chr4_1:54806368-54806387 | Msa0556550:intron | 35.0% |
| CATGAACTCTGTTACTGAAA+AGG | - | chr4_1:54806619-54806638 | Msa0556550:intron | 35.0% | |
| TGAACTCTGTTACTGAAAAG+GGG | - | chr4_1:54806621-54806640 | Msa0556550:intron | 35.0% | |
| AGTCCCATTATAAATTGCCA+CGG | + | chr4_1:54806648-54806667 | None:intergenic | 35.0% | |
| !! | TAGAGTTGCTGCTTTAGTTA+TGG | - | chr4_1:54806700-54806719 | Msa0556550:intron | 35.0% |
| GAGACAATCATTAGTGAAAG+GGG | + | chr4_1:54806751-54806770 | None:intergenic | 35.0% | |
| ! | GATTGTCTCTTCTTGATGAT+AGG | - | chr4_1:54806762-54806781 | Msa0556550:intron | 35.0% |
| CTGAAAAAAGTCTTTGTCTG+GGG | + | chr4_1:54806800-54806819 | None:intergenic | 35.0% | |
| !! | AATGATTTCTGGTTCTGCAT+TGG | - | chr4_1:54806914-54806933 | Msa0556550:intron | 35.0% |
| ACTCAGAAAGTAGTAGAAAC+GGG | + | chr4_1:54807018-54807037 | None:intergenic | 35.0% | |
| AACAAATTGCAACAAAGCTG+CGG | - | chr4_1:54807274-54807293 | Msa0556550:intron | 35.0% | |
| GAAAATGCTGAGGGAAATAT+TGG | - | chr4_1:54807527-54807546 | Msa0556550:intron | 35.0% | |
| TGCAATCATATCCACAAACT+GGG | + | chr4_1:54807765-54807784 | None:intergenic | 35.0% | |
| GACAGATCTGATAATATTCC+AGG | - | chr4_1:54807794-54807813 | Msa0556550:intron | 35.0% | |
| !!! | TTATTTTTTCCTCCTCCCTT+TGG | - | chr4_1:54807817-54807836 | Msa0556550:intron | 35.0% |
| TAAAATGATGTTCCAAAGGG+AGG | + | chr4_1:54807832-54807851 | None:intergenic | 35.0% | |
| ! | AGGAAGCTTTTCAAATACGA+GGG | - | chr4_1:54807890-54807909 | Msa0556550:intron | 35.0% |
| !! | ACGTCACCTTTGAAATCAAT+AGG | - | chr4_1:54807928-54807947 | Msa0556550:intron | 35.0% |
| TACGTGTAAATTTCAGGAAC+CGG | + | chr4_1:54808216-54808235 | None:intergenic | 35.0% | |
| TCCCATTACGTGTAAATTTC+AGG | + | chr4_1:54808222-54808241 | None:intergenic | 35.0% | |
| ! | ATTCCTGTTTTGTGGAATCA+AGG | - | chr4_1:54808335-54808354 | Msa0556550:intron | 35.0% |
| CCATACTGGACTATATACTT+AGG | + | chr4_1:54808399-54808418 | None:intergenic | 35.0% | |
| CCTAAGTATATAGTCCAGTA+TGG | - | chr4_1:54808396-54808415 | Msa0556550:intron | 35.0% | |
| ACAAAACAGTGATTCCATAC+TGG | + | chr4_1:54808413-54808432 | None:intergenic | 35.0% | |
| !!! | TGGGAGTATTTTGTACATAC+AGG | - | chr4_1:54808490-54808509 | Msa0556550:intron | 35.0% |
| CATACAGGAGTTAATGGAAT+TGG | - | chr4_1:54808505-54808524 | Msa0556550:intron | 35.0% | |
| CATCTAAGGAAACTTGGTAT+GGG | - | chr4_1:54808728-54808747 | Msa0556550:intron | 35.0% | |
| TTATTATGCACCCCTTATAC+TGG | - | chr4_1:54808777-54808796 | Msa0556550:intron | 35.0% | |
| TTGGTTTCTGTGATAGTTAG+AGG | - | chr4_1:54808966-54808985 | Msa0556550:intron | 35.0% | |
| !!! | ACCTTACAAGCTGGTTTTTA+AGG | - | chr4_1:54809176-54809195 | Msa0556550:intron | 35.0% |
| TCCTTAAAAACCAGCTTGTA+AGG | + | chr4_1:54809180-54809199 | None:intergenic | 35.0% | |
| !! | CTGGTTTTTAAGGATGAGTT+AGG | - | chr4_1:54809186-54809205 | Msa0556550:intron | 35.0% |
| TCTGCTACCATGTTGAAATT+CGG | + | chr4_1:54809214-54809233 | None:intergenic | 35.0% | |
| !!! | TGGTTTTGTAAGGATGAGTT+AGG | - | chr4_1:54809448-54809467 | Msa0556550:intron | 35.0% |
| CTTCAAAAAGAATACCACAG+AGG | + | chr4_1:54809547-54809566 | None:intergenic | 35.0% | |
| ! | TCTCGTCCTTAGTATTGTTT+TGG | - | chr4_1:54809702-54809721 | Msa0556550:intron | 35.0% |
| CATTATATTGGATGGTTGCT+TGG | - | chr4_1:54809744-54809763 | Msa0556550:intron | 35.0% | |
| CTCTCTCCACTTATTTGAAT+AGG | - | chr4_1:54809875-54809894 | Msa0556550:intron | 35.0% | |
| ATCTGTTGACCAAATCAAAG+AGG | - | chr4_1:54809919-54809938 | Msa0556550:intron | 35.0% | |
| CAAAGAGGATCGTATTAGAA+AGG | - | chr4_1:54809934-54809953 | Msa0556550:intron | 35.0% | |
| !! | GGCATTGACGTCATAATAAA+GGG | + | chr4_1:54810115-54810134 | None:intergenic | 35.0% |
| CTTATGGCACAAAAACTTGA+TGG | + | chr4_1:54810534-54810553 | None:intergenic | 35.0% | |
| ! | TAGATGGTTTTTGCATACTG+TGG | - | chr4_1:54810576-54810595 | Msa0556550:intron | 35.0% |
| !! | AAGCACTGATAGCTGTTAAA+AGG | + | chr4_1:54810910-54810929 | None:intergenic | 35.0% |
| GTATCATTTGTGGGAAAAGT+TGG | - | chr4_1:54810970-54810989 | Msa0556550:intron | 35.0% | |
| GTGAAGTTCATTGAGATATC+AGG | - | chr4_1:54811000-54811019 | Msa0556550:CDS | 35.0% | |
| AAAATGGAGCATGTCAATAC+TGG | - | chr4_1:54811050-54811069 | Msa0556550:CDS | 35.0% | |
| GGTTATGTATGCCAAATTGA+TGG | - | chr4_1:54811188-54811207 | Msa0556550:CDS | 35.0% | |
| ! | TTTAGAACGCATGATGCAAA+TGG | - | chr4_1:54811240-54811259 | Msa0556550:CDS | 35.0% |
| AGTTATGTATACGTTCTGAC+TGG | + | chr4_1:54811357-54811376 | None:intergenic | 35.0% | |
| ! | AAGAGAACGCACCTTTGAAA+TGG | + | chr4_1:54800970-54800989 | None:intergenic | 40.0% |
| GAAGTTAAACGCTATGGCAT+GGG | + | chr4_1:54800995-54801014 | None:intergenic | 40.0% | |
| TGAAGTTAAACGCTATGGCA+TGG | + | chr4_1:54800996-54801015 | None:intergenic | 40.0% | |
| ! | GGCATTGAAGTTAAACGCTA+TGG | + | chr4_1:54801001-54801020 | None:intergenic | 40.0% |
| GAAATGGGAGTGAAGAAAGA+AGG | + | chr4_1:54801072-54801091 | None:intergenic | 40.0% | |
| !! | GTTAAAAGCTTCGTTGGCTT+TGG | - | chr4_1:54801275-54801294 | Msa0556550:three_prime_UTR | 40.0% |
| !! | TTCGTTGGCTTTGGTTTGTT+AGG | - | chr4_1:54801284-54801303 | Msa0556550:three_prime_UTR | 40.0% |
| !! | TCGTTGGCTTTGGTTTGTTA+GGG | - | chr4_1:54801285-54801304 | Msa0556550:three_prime_UTR | 40.0% |
| GTGCCTCCAGAAATTAGTTA+CGG | - | chr4_1:54801378-54801397 | Msa0556550:exon | 40.0% | |
| GGCAGAGTTATGCTTATTGA+TGG | - | chr4_1:54801456-54801475 | Msa0556550:CDS | 40.0% | |
| AGAGCATACTACAAGCTGTT+AGG | - | chr4_1:54801495-54801514 | Msa0556550:intron | 40.0% | |
| CCCTTTGAACTCTATGTAGA+AGG | + | chr4_1:54801675-54801694 | None:intergenic | 40.0% | |
| ATAACAATGTCACGTCTCCT+AGG | - | chr4_1:54801701-54801720 | Msa0556550:intron | 40.0% | |
| AACACAACATTCATGGACCT+AGG | + | chr4_1:54801721-54801740 | None:intergenic | 40.0% | |
| CCTCGTAAACACAACATTCA+TGG | + | chr4_1:54801728-54801747 | None:intergenic | 40.0% | |
| CCATGAATGTTGTGTTTACG+AGG | - | chr4_1:54801725-54801744 | Msa0556550:intron | 40.0% | |
| !! | TAAGTTTTGCATGGCTGGTT+GGG | + | chr4_1:54801847-54801866 | None:intergenic | 40.0% |
| ! | ATAAGTTTTGCATGGCTGGT+TGG | + | chr4_1:54801848-54801867 | None:intergenic | 40.0% |
| ! | TAGCATAAGTTTTGCATGGC+TGG | + | chr4_1:54801852-54801871 | None:intergenic | 40.0% |
| CAATAGCACATTGTTGGGAT+TGG | + | chr4_1:54801898-54801917 | None:intergenic | 40.0% | |
| AACCCAATCTCCATTTCCAT+CGG | + | chr4_1:54802202-54802221 | None:intergenic | 40.0% | |
| AGAAAAGTCTTGATGAGGGT+GGG | + | chr4_1:54802414-54802433 | None:intergenic | 40.0% | |
| CCATTACGCACTTAGACAAA+TGG | + | chr4_1:54802629-54802648 | None:intergenic | 40.0% | |
| CCATTTGTCTAAGTGCGTAA+TGG | - | chr4_1:54802626-54802645 | Msa0556550:intron | 40.0% | |
| GACAAAACATACCACCACAT+GGG | + | chr4_1:54803040-54803059 | None:intergenic | 40.0% | |
| GTAAACACTGAACACGACAA+GGG | + | chr4_1:54803147-54803166 | None:intergenic | 40.0% | |
| TGTAAACACTGAACACGACA+AGG | + | chr4_1:54803148-54803167 | None:intergenic | 40.0% | |
| ATAGATGCTGTGGGAAAAAG+TGG | - | chr4_1:54803533-54803552 | Msa0556550:intron | 40.0% | |
| TAGATGCTGTGGGAAAAAGT+GGG | - | chr4_1:54803534-54803553 | Msa0556550:intron | 40.0% | |
| !! | GATGATATGATGGACTTAGG+GGG | - | chr4_1:54803564-54803583 | Msa0556550:intron | 40.0% |
| CAACAACAAAAAATACGGCG+AGG | - | chr4_1:54804040-54804059 | Msa0556550:intron | 40.0% | |
| GAAAAGATAGTTCACTTCGG+CGG | + | chr4_1:54804353-54804372 | None:intergenic | 40.0% | |
| CAACTGTCTAATACTTCAGC+AGG | + | chr4_1:54804380-54804399 | None:intergenic | 40.0% | |
| TCTGTCCCTTTGAACCATTT+AGG | - | chr4_1:54805397-54805416 | Msa0556550:intron | 40.0% | |
| GAAAGGCCTAAATGGTTCAA+AGG | + | chr4_1:54805406-54805425 | None:intergenic | 40.0% | |
| CTACCTTATCACCAATAGCA+AGG | + | chr4_1:54805536-54805555 | None:intergenic | 40.0% | |
| ! | GCTATTGGTGATAAGGTAGT+AGG | - | chr4_1:54805537-54805556 | Msa0556550:CDS | 40.0% |
| TTTGGTCATCATAAGCTAGG+CGG | - | chr4_1:54805611-54805630 | Msa0556550:intron | 40.0% | |
| TAATCTCAACTGCTTTGGTG+GGG | - | chr4_1:54805646-54805665 | Msa0556550:intron | 40.0% | |
| !! | CGAAAGGTTCTAGACTTTGA+AGG | - | chr4_1:54805680-54805699 | Msa0556550:intron | 40.0% |
| GTCCAAAAGGAACAAGTACA+AGG | + | chr4_1:54805734-54805753 | None:intergenic | 40.0% | |
| CCCCAATGAAGCTTGAATAA+GGG | + | chr4_1:54805833-54805852 | None:intergenic | 40.0% | |
| CCCTTATTCAAGCTTCATTG+GGG | - | chr4_1:54805830-54805849 | Msa0556550:intron | 40.0% | |
| TCCCCAATGAAGCTTGAATA+AGG | + | chr4_1:54805834-54805853 | None:intergenic | 40.0% | |
| GCTTTGATTCAATTGGACTG+GGG | - | chr4_1:54805952-54805971 | Msa0556550:intron | 40.0% | |
| ! | TTCATGCGCACTTTGTTTGA+AGG | - | chr4_1:54806123-54806142 | Msa0556550:intron | 40.0% |
| TGTTTGAAGGCCAGAACTTT+AGG | - | chr4_1:54806136-54806155 | Msa0556550:CDS | 40.0% | |
| TGAACAATGGTATCAGGAGT+AGG | + | chr4_1:54806198-54806217 | None:intergenic | 40.0% | |
| TACTCCTGATACCATTGTTC+AGG | - | chr4_1:54806197-54806216 | Msa0556550:CDS | 40.0% | |
| ACTCCTGATACCATTGTTCA+GGG | - | chr4_1:54806198-54806217 | Msa0556550:CDS | 40.0% | |
| ! | ATACCTCAAAGCATCCATCA+AGG | - | chr4_1:54806227-54806246 | Msa0556550:CDS | 40.0% |
| ! | CTCAATGACTTTTATGGCCA+TGG | + | chr4_1:54806253-54806272 | None:intergenic | 40.0% |
| CATGGCCATAAAAGTCATTG+AGG | - | chr4_1:54806251-54806270 | Msa0556550:intron | 40.0% | |
| AAAGTCATTGAGGCAAGTTG+TGG | - | chr4_1:54806261-54806280 | Msa0556550:intron | 40.0% | |
| GTAGAAGCAGATGATGTGAT+TGG | - | chr4_1:54806352-54806371 | Msa0556550:intron | 40.0% | |
| ! | AAAGGTACATCGGAGTTAGA+GGG | + | chr4_1:54806454-54806473 | None:intergenic | 40.0% |
| ! | TAAAGGTACATCGGAGTTAG+AGG | + | chr4_1:54806455-54806474 | None:intergenic | 40.0% |
| GAACTCTGTTACTGAAAAGG+GGG | - | chr4_1:54806622-54806641 | Msa0556550:intron | 40.0% | |
| AATCATTAGTGAAAGGGGCT+TGG | + | chr4_1:54806746-54806765 | None:intergenic | 40.0% | |
| CTCAGAAAGTAGTAGAAACG+GGG | + | chr4_1:54807017-54807036 | None:intergenic | 40.0% | |
| ACAACCATATACTGGAGTAC+TGG | - | chr4_1:54807207-54807226 | Msa0556550:intron | 40.0% | |
| TTGTCCAGTACTCCAGTATA+TGG | + | chr4_1:54807214-54807233 | None:intergenic | 40.0% | |
| GAGAATATAGAAGGCAAGCT+AGG | - | chr4_1:54807422-54807441 | Msa0556550:intron | 40.0% | |
| CAAACGAAACCATCCTATTG+AGG | + | chr4_1:54807700-54807719 | None:intergenic | 40.0% | |
| CTCAATAGGATGGTTTCGTT+TGG | - | chr4_1:54807698-54807717 | Msa0556550:intron | 40.0% | |
| ATCATATCCACAAACTGGGA+TGG | + | chr4_1:54807761-54807780 | None:intergenic | 40.0% | |
| GTGCAATCATATCCACAAAC+TGG | + | chr4_1:54807766-54807785 | None:intergenic | 40.0% | |
| GTGGATATGATTGCACTTTC+TGG | - | chr4_1:54807770-54807789 | Msa0556550:intron | 40.0% | |
| TTTGAAAAGCTTCCTGGACT+TGG | + | chr4_1:54807885-54807904 | None:intergenic | 40.0% | |
| CTCGTATTTGAAAAGCTTCC+TGG | + | chr4_1:54807891-54807910 | None:intergenic | 40.0% | |
| ! | CAGGAAGCTTTTCAAATACG+AGG | - | chr4_1:54807889-54807908 | Msa0556550:intron | 40.0% |
| ATTGGATCATGCACAAGTAG+AGG | + | chr4_1:54808022-54808041 | None:intergenic | 40.0% | |
| TGTAGAATGGAATGCATTGG+AGG | + | chr4_1:54808293-54808312 | None:intergenic | 40.0% | |
| CCTTGTAGAATGGAATGCAT+TGG | + | chr4_1:54808296-54808315 | None:intergenic | 40.0% | |
| CCAATGCATTCCATTCTACA+AGG | - | chr4_1:54808293-54808312 | Msa0556550:intron | 40.0% | |
| GGAAGGAATTCCTTGTAGAA+TGG | + | chr4_1:54808306-54808325 | None:intergenic | 40.0% | |
| TACAAGGAATTCCTTCCTCT+AGG | - | chr4_1:54808309-54808328 | Msa0556550:intron | 40.0% | |
| ACAAGGAATTCCTTCCTCTA+GGG | - | chr4_1:54808310-54808329 | Msa0556550:intron | 40.0% | |
| TAGTTTGGCACGAAGAAAGA+TGG | + | chr4_1:54808362-54808381 | None:intergenic | 40.0% | |
| TTGCTCAAAGTGAGCATCTA+AGG | - | chr4_1:54808714-54808733 | Msa0556550:intron | 40.0% | |
| AGTGAGCATCTAAGGAAACT+TGG | - | chr4_1:54808722-54808741 | Msa0556550:intron | 40.0% | |
| GCATCTAAGGAAACTTGGTA+TGG | - | chr4_1:54808727-54808746 | Msa0556550:intron | 40.0% | |
| AGAGAGGTTAGGCTACAATT+TGG | - | chr4_1:54808875-54808894 | Msa0556550:intron | 40.0% | |
| GGTTAGGCTACAATTTGGTA+AGG | - | chr4_1:54808880-54808899 | Msa0556550:intron | 40.0% | |
| AGAGTATACACAGATAGGCT+AGG | + | chr4_1:54808933-54808952 | None:intergenic | 40.0% | |
| ! | GAGTCTTATCTAACCGATGT+GGG | + | chr4_1:54809122-54809141 | None:intergenic | 40.0% |
| ! | AGAGTCTTATCTAACCGATG+TGG | + | chr4_1:54809123-54809142 | None:intergenic | 40.0% |
| AAAACCAGCTTGTAAGGTGA+GGG | + | chr4_1:54809174-54809193 | None:intergenic | 40.0% | |
| AAAAACCAGCTTGTAAGGTG+AGG | + | chr4_1:54809175-54809194 | None:intergenic | 40.0% | |
| TTAGGCTCCGAATTTCAACA+TGG | - | chr4_1:54809204-54809223 | Msa0556550:intron | 40.0% | |
| CCTATCCAAGATCTATCGTT+GGG | - | chr4_1:54809235-54809254 | Msa0556550:intron | 40.0% | |
| ! | GAGTCTTATCTAACCGATGT+GGG | + | chr4_1:54809122-54809141 | None:intergenic | 40.0% |
| ! | AGAGTCTTATCTAACCGATG+TGG | + | chr4_1:54809123-54809142 | None:intergenic | 40.0% |
| CAAAACCAGCTTGTAAGGTT+AGG | + | chr4_1:54809436-54809455 | None:intergenic | 40.0% | |
| CCTTACAAAACCAGCTTGTA+AGG | + | chr4_1:54809441-54809460 | None:intergenic | 40.0% | |
| !!! | CCTTACAAGCTGGTTTTGTA+AGG | - | chr4_1:54809438-54809457 | Msa0556550:intron | 40.0% |
| ! | TTTTCTGGACAGTCCAGTAT+AGG | + | chr4_1:54809591-54809610 | None:intergenic | 40.0% |
| AATAACTTTACCCCTGAAGC+GGG | + | chr4_1:54809964-54809983 | None:intergenic | 40.0% | |
| GAATAACTTTACCCCTGAAG+CGG | + | chr4_1:54809965-54809984 | None:intergenic | 40.0% | |
| GTATAGTTTCGAACAAGGGA+AGG | + | chr4_1:54810069-54810088 | None:intergenic | 40.0% | |
| !! | CGGCATTGACGTCATAATAA+AGG | + | chr4_1:54810116-54810135 | None:intergenic | 40.0% |
| ! | CTGCTCAGCATTTTCAGTTA+AGG | + | chr4_1:54810173-54810192 | None:intergenic | 40.0% |
| CTTAACTGAAAATGCTGAGC+AGG | - | chr4_1:54810171-54810190 | Msa0556550:CDS | 40.0% | |
| TGAGCAGGCTATATTAAGCA+AGG | - | chr4_1:54810186-54810205 | Msa0556550:CDS | 40.0% | |
| GGCTATATTAAGCAAGGAAC+TGG | - | chr4_1:54810192-54810211 | Msa0556550:CDS | 40.0% | |
| TGAATGGTACCATGTAGGAT+GGG | + | chr4_1:54810365-54810384 | None:intergenic | 40.0% | |
| TACAGTGAATGGTACCATGT+AGG | + | chr4_1:54810370-54810389 | None:intergenic | 40.0% | |
| ! | TCTCTTGTTTACTAAACCCG+AGG | - | chr4_1:54810395-54810414 | Msa0556550:intron | 40.0% |
| TTTACTAAACCCGAGGTTTG+TGG | - | chr4_1:54810402-54810421 | Msa0556550:intron | 40.0% | |
| ! | ATGGTTTTTGCATACTGTGG+CGG | - | chr4_1:54810579-54810598 | Msa0556550:intron | 40.0% |
| TGCAGTTGCATACATGTTTG+CGG | - | chr4_1:54810622-54810641 | Msa0556550:intron | 40.0% | |
| AGCGTACTGCCAAACATTTA+CGG | + | chr4_1:54810802-54810821 | None:intergenic | 40.0% | |
| TTTCAGCTGATCCTATCATC+AGG | - | chr4_1:54810942-54810961 | Msa0556550:intron | 40.0% | |
| TGATACACTCTCCTGATGAT+AGG | + | chr4_1:54810956-54810975 | None:intergenic | 40.0% | |
| ! | TCAGGAGAGTGTATCATTTG+TGG | - | chr4_1:54810960-54810979 | Msa0556550:intron | 40.0% |
| ! | CAGGAGAGTGTATCATTTGT+GGG | - | chr4_1:54810961-54810980 | Msa0556550:intron | 40.0% |
| TGTGGGAAAAGTTGGATTCA+AGG | - | chr4_1:54810978-54810997 | Msa0556550:CDS | 40.0% | |
| TGGAACCACAATACAACATG+AGG | - | chr4_1:54811070-54811089 | Msa0556550:CDS | 40.0% | |
| GGAACCACAATACAACATGA+GGG | - | chr4_1:54811071-54811090 | Msa0556550:CDS | 40.0% | |
| GAACCACAATACAACATGAG+GGG | - | chr4_1:54811072-54811091 | Msa0556550:CDS | 40.0% | |
| AATCCCCTCATGTTGTATTG+TGG | + | chr4_1:54811078-54811097 | None:intergenic | 40.0% | |
| !! | GTCGAGCATGTGTTTTTGTT+GGG | - | chr4_1:54811114-54811133 | Msa0556550:intron | 40.0% |
| ! | GAAGTGACAATAGCTCTACT+GGG | - | chr4_1:54811284-54811303 | Msa0556550:CDS | 40.0% |
| ! | TGCAGTTTCAGTGTCGGAAA+CGG | + | chr4_1:54800933-54800952 | None:intergenic | 45.0% |
| CGTGAAGAACGAAGAAGGTT+TGG | + | chr4_1:54801179-54801198 | None:intergenic | 45.0% | |
| ! | GCTCCGTAACTAATTTCTGG+AGG | + | chr4_1:54801384-54801403 | None:intergenic | 45.0% |
| GCAGCTCCGTAACTAATTTC+TGG | + | chr4_1:54801387-54801406 | None:intergenic | 45.0% | |
| GTAACAGAACCAATGTGCAC+GGG | + | chr4_1:54801414-54801433 | None:intergenic | 45.0% | |
| GGTAACAGAACCAATGTGCA+CGG | + | chr4_1:54801415-54801434 | None:intergenic | 45.0% | |
| ATGCCGATGGAAATGGAGAT+TGG | - | chr4_1:54802196-54802215 | Msa0556550:intron | 45.0% | |
| TGCCGATGGAAATGGAGATT+GGG | - | chr4_1:54802197-54802216 | Msa0556550:intron | 45.0% | |
| CAGAAAAGTCTTGATGAGGG+TGG | + | chr4_1:54802415-54802434 | None:intergenic | 45.0% | |
| ! | CTAAGACTGTGTGTTGCTAC+TGG | + | chr4_1:54802686-54802705 | None:intergenic | 45.0% |
| GGAATTCATTCCTTCCCATG+TGG | - | chr4_1:54803023-54803042 | Msa0556550:intron | 45.0% | |
| ATTCATTCCTTCCCATGTGG+TGG | - | chr4_1:54803026-54803045 | Msa0556550:intron | 45.0% | |
| AAACATACCACCACATGGGA+AGG | + | chr4_1:54803036-54803055 | None:intergenic | 45.0% | |
| GGACAAAACATACCACCACA+TGG | + | chr4_1:54803041-54803060 | None:intergenic | 45.0% | |
| CAGGTAGTGTTTGACCATGA+TGG | - | chr4_1:54803208-54803227 | Msa0556550:intron | 45.0% | |
| ATACGGTCTCTAACGTTAGG+AGG | - | chr4_1:54803922-54803941 | Msa0556550:intron | 45.0% | |
| CTGATCAGCCATCAACGATT+TGG | - | chr4_1:54803972-54803991 | Msa0556550:intron | 45.0% | |
| CAGAGGATCAGGACACTTAA+AGG | + | chr4_1:54804187-54804206 | None:intergenic | 45.0% | |
| CAGTGTAAAGCCAGTATTGC+TGG | + | chr4_1:54804210-54804229 | None:intergenic | 45.0% | |
| ! | GATGGGAATCTTTTCACCCT+TGG | - | chr4_1:54804650-54804669 | Msa0556550:CDS | 45.0% |
| TCTACAAGCTGTTGATGCAC+CGG | - | chr4_1:54804830-54804849 | Msa0556550:intron | 45.0% | |
| TCAATGTGCCAAGATACCAC+CGG | + | chr4_1:54804852-54804871 | None:intergenic | 45.0% | |
| TTCTCTGTTATTCCAGAGCC+TGG | - | chr4_1:54805339-54805358 | Msa0556550:intron | 45.0% | |
| TTACATCTCTCTAAGCAGCC+AGG | + | chr4_1:54805360-54805379 | None:intergenic | 45.0% | |
| TGTGGAGAGAAAGGCCTAAA+TGG | + | chr4_1:54805414-54805433 | None:intergenic | 45.0% | |
| GATGAGAACTGTGGAGAGAA+AGG | + | chr4_1:54805423-54805442 | None:intergenic | 45.0% | |
| TTATCACCAATAGCAAGGGC+AGG | + | chr4_1:54805531-54805550 | None:intergenic | 45.0% | |
| !! | TGCCCTTGCTATTGGTGATA+AGG | - | chr4_1:54805530-54805549 | Msa0556550:CDS | 45.0% |
| TGGGGCATAACAAGAACGAA+AGG | - | chr4_1:54805664-54805683 | Msa0556550:intron | 45.0% | |
| ! | GTTCTAGACTTTGAAGGTGC+TGG | - | chr4_1:54805686-54805705 | Msa0556550:intron | 45.0% |
| TGCTGGAGTTTCTACTCCTT+GGG | - | chr4_1:54805703-54805722 | Msa0556550:intron | 45.0% | |
| CAAGTACAAGGAATCACCCA+AGG | + | chr4_1:54805722-54805741 | None:intergenic | 45.0% | |
| CAAGAGGGCTAAAGTCCAAA+AGG | + | chr4_1:54805747-54805766 | None:intergenic | 45.0% | |
| ACAATGGTATCAGGAGTAGG+AGG | + | chr4_1:54806195-54806214 | None:intergenic | 45.0% | |
| !! | TTTTATGGCCATGGCCTTGA+TGG | + | chr4_1:54806244-54806263 | None:intergenic | 45.0% |
| ACATCATCTGCTTCTACACC+TGG | + | chr4_1:54806349-54806368 | None:intergenic | 45.0% | |
| !! | CCTTAAGGAGTGTTGATGCT+GGG | - | chr4_1:54806383-54806402 | Msa0556550:intron | 45.0% |
| GGGCCGTGGCAATTTATAAT+GGG | - | chr4_1:54806642-54806661 | Msa0556550:intron | 45.0% | |
| ! | GGGCTTGGTAATATCACTGA+AGG | + | chr4_1:54806731-54806750 | None:intergenic | 45.0% |
| AGTCTTAGGAGACGTAACGA+CGG | + | chr4_1:54806832-54806851 | None:intergenic | 45.0% | |
| GATACTAACTGATCACCACG+TGG | + | chr4_1:54806859-54806878 | None:intergenic | 45.0% | |
| !! | GATTTCTGGTTCTGCATTGG+CGG | - | chr4_1:54806917-54806936 | Msa0556550:intron | 45.0% |
| ! | ACCAAGCCTTATCCCACTAA+GGG | + | chr4_1:54807132-54807151 | None:intergenic | 45.0% |
| ! | AACCAAGCCTTATCCCACTA+AGG | + | chr4_1:54807133-54807152 | None:intergenic | 45.0% |
| AAATCGCTCTGCAAAGTCCT+CGG | + | chr4_1:54807726-54807745 | None:intergenic | 45.0% | |
| ! | TCTGAAACCATCCCAGTTTG+TGG | - | chr4_1:54807751-54807770 | Msa0556550:intron | 45.0% |
| GGGAGGAGGAAAAAATAACC+TGG | + | chr4_1:54807815-54807834 | None:intergenic | 45.0% | |
| AATGATGTTCCAAAGGGAGG+AGG | + | chr4_1:54807829-54807848 | None:intergenic | 45.0% | |
| TGAACAAGGTTACCAAGTCC+AGG | - | chr4_1:54807870-54807889 | Msa0556550:intron | 45.0% | |
| CAAAACAGGAATGACCCTAG+AGG | + | chr4_1:54808327-54808346 | None:intergenic | 45.0% | |
| ! | CTAGGGTCATTCCTGTTTTG+TGG | - | chr4_1:54808327-54808346 | Msa0556550:intron | 45.0% |
| GGACCTTGATTCCACAAAAC+AGG | + | chr4_1:54808341-54808360 | None:intergenic | 45.0% | |
| CTGAATGTTGATGTGGCAAG+AGG | - | chr4_1:54808852-54808871 | Msa0556550:intron | 45.0% | |
| CAATTTGGTAAGGTTTGCGC+CGG | - | chr4_1:54808890-54808909 | Msa0556550:intron | 45.0% | |
| AAGCCAACACAAGGCAACTA+GGG | + | chr4_1:54809081-54809100 | None:intergenic | 45.0% | |
| AAAGCCAACACAAGGCAACT+AGG | + | chr4_1:54809082-54809101 | None:intergenic | 45.0% | |
| !! | TTGCCTTGTGTTGGCTTTGA+GGG | - | chr4_1:54809084-54809103 | Msa0556550:intron | 45.0% |
| AAACCAGCTTGTAAGGTGAG+GGG | + | chr4_1:54809173-54809192 | None:intergenic | 45.0% | |
| GCCTATCCAAGATCTATCGT+TGG | - | chr4_1:54809234-54809253 | Msa0556550:intron | 45.0% | |
| CCCAACGATAGATCTTGGAT+AGG | + | chr4_1:54809238-54809257 | None:intergenic | 45.0% | |
| GGAATCCCAACGATAGATCT+TGG | + | chr4_1:54809243-54809262 | None:intergenic | 45.0% | |
| AAGCCAACTCAAGGCAACTA+GGG | + | chr4_1:54809342-54809361 | None:intergenic | 45.0% | |
| AAAGCCAACTCAAGGCAACT+AGG | + | chr4_1:54809343-54809362 | None:intergenic | 45.0% | |
| !! | TTGCCTTGAGTTGGCTTTGA+GGG | - | chr4_1:54809345-54809364 | Msa0556550:intron | 45.0% |
| GTCTTATCGTCATTCCTCTG+TGG | - | chr4_1:54809530-54809549 | Msa0556550:intron | 45.0% | |
| AGGCACATTGGAGAAGTTGT+TGG | - | chr4_1:54809895-54809914 | Msa0556550:intron | 45.0% | |
| !! | TAGAAAGGTATTCCCGCTTC+AGG | - | chr4_1:54809949-54809968 | Msa0556550:intron | 45.0% |
| !! | AGAAAGGTATTCCCGCTTCA+GGG | - | chr4_1:54809950-54809969 | Msa0556550:intron | 45.0% |
| TTATGACGTCAATGCCGACA+TGG | - | chr4_1:54810119-54810138 | Msa0556550:intron | 45.0% | |
| TTGTGATCTCCCATCCTACA+TGG | - | chr4_1:54810353-54810372 | Msa0556550:intron | 45.0% | |
| GTGAATGGTACCATGTAGGA+TGG | + | chr4_1:54810366-54810385 | None:intergenic | 45.0% | |
| ! | AGAGAGCGTGGTTATGCTTA+TGG | + | chr4_1:54810550-54810569 | None:intergenic | 45.0% |
| CATCTAGTTATGAGAGAGCG+TGG | + | chr4_1:54810562-54810581 | None:intergenic | 45.0% | |
| CACGCTCTCTCATAACTAGA+TGG | - | chr4_1:54810560-54810579 | Msa0556550:intron | 45.0% | |
| GCAGTTGCATACATGTTTGC+GGG | - | chr4_1:54810623-54810642 | Msa0556550:intron | 45.0% | |
| GTGTACACTGTACAGGACAA+TGG | - | chr4_1:54810869-54810888 | Msa0556550:intron | 45.0% | |
| !! | CGTCGAGCATGTGTTTTTGT+TGG | - | chr4_1:54811113-54811132 | Msa0556550:intron | 45.0% |
| TTTCATCGCAGAACACTCAC+TGG | + | chr4_1:54811156-54811175 | None:intergenic | 45.0% | |
| CGCATGATGCAAATGGTAGT+AGG | - | chr4_1:54811247-54811266 | Msa0556550:CDS | 45.0% | |
| ! | GGAAGTGACAATAGCTCTAC+TGG | - | chr4_1:54811283-54811302 | Msa0556550:CDS | 45.0% |
| !! | ATGGGCATTGGGTAGAAGTT+AGG | + | chr4_1:54811325-54811344 | None:intergenic | 45.0% |
| !!! | TATTTTGATTATTTTATTTT+TGG | - | chr4_1:54803334-54803353 | Msa0556550:intron | 5.0% |
| !!! | ATTTTGATTATTTTATTTTT+GGG | - | chr4_1:54803335-54803354 | Msa0556550:intron | 5.0% |
| !! | TTCATATTATTATAATATTA+TGG | - | chr4_1:54806584-54806603 | Msa0556550:intron | 5.0% |
| !!! | TATATTTTTTAATTAGTTTT+TGG | - | chr4_1:54810452-54810471 | Msa0556550:intron | 5.0% |
| ! | AGTTTCAGTGTCGGAAACGG+GGG | + | chr4_1:54800930-54800949 | None:intergenic | 50.0% |
| ! | CAGTTTCAGTGTCGGAAACG+GGG | + | chr4_1:54800931-54800950 | None:intergenic | 50.0% |
| ! | GCAGTTTCAGTGTCGGAAAC+GGG | + | chr4_1:54800932-54800951 | None:intergenic | 50.0% |
| GGGAGTGAAGAAAGAAGGAG+TGG | + | chr4_1:54801067-54801086 | None:intergenic | 50.0% | |
| TGAATGCGACGGAGAGGAAA+TGG | + | chr4_1:54801110-54801129 | None:intergenic | 50.0% | |
| ACTGCGAGAGTAGTTTCCGA+CGG | + | chr4_1:54801147-54801166 | None:intergenic | 50.0% | |
| GAGTGTGTTACCTTGGAGAG+TGG | + | chr4_1:54801206-54801225 | None:intergenic | 50.0% | |
| ATTGCGCGAGTGTGTTACCT+TGG | + | chr4_1:54801213-54801232 | None:intergenic | 50.0% | |
| TCTGCAACTTCTCCAACCAC+CGG | - | chr4_1:54801351-54801370 | Msa0556550:three_prime_UTR | 50.0% | |
| AACTTCTCCAACCACCGGAA+CGG | - | chr4_1:54801356-54801375 | Msa0556550:three_prime_UTR | 50.0% | |
| !! | AATTTCTGGAGGCACCGTTC+CGG | + | chr4_1:54801373-54801392 | None:intergenic | 50.0% |
| TGTTACCAATGCCGAAGCTG+CGG | - | chr4_1:54801428-54801447 | Msa0556550:CDS | 50.0% | |
| CTAGCACATGCCGATGGAAA+TGG | - | chr4_1:54802189-54802208 | Msa0556550:intron | 50.0% | |
| TCTCCCAAATGCCTCCTTAG+CGG | - | chr4_1:54803824-54803843 | Msa0556550:intron | 50.0% | |
| !! | CATCCGCTAAGGAGGCATTT+GGG | + | chr4_1:54803830-54803849 | None:intergenic | 50.0% |
| !! | TCATCCGCTAAGGAGGCATT+TGG | + | chr4_1:54803831-54803850 | None:intergenic | 50.0% |
| !! | CTTTAGGGCTTCATCCGCTA+AGG | + | chr4_1:54803841-54803860 | None:intergenic | 50.0% |
| AGCGGATGAAGCCCTAAAGT+TGG | - | chr4_1:54803842-54803861 | Msa0556550:CDS | 50.0% | |
| AGTATTGCTGGCAGAGGATC+AGG | + | chr4_1:54804198-54804217 | None:intergenic | 50.0% | |
| TGATCCTCTGCCAGCAATAC+TGG | - | chr4_1:54804197-54804216 | Msa0556550:intron | 50.0% | |
| AAAGCCAGTATTGCTGGCAG+AGG | + | chr4_1:54804204-54804223 | None:intergenic | 50.0% | |
| TATCGGTGCAAGAGCTTGGT+GGG | + | chr4_1:54804719-54804738 | None:intergenic | 50.0% | |
| TTATCGGTGCAAGAGCTTGG+TGG | + | chr4_1:54804720-54804739 | None:intergenic | 50.0% | |
| TGGTTATCGGTGCAAGAGCT+TGG | + | chr4_1:54804723-54804742 | None:intergenic | 50.0% | |
| ! | AGCTCTTGCACCGATAACCA+AGG | - | chr4_1:54804723-54804742 | Msa0556550:intron | 50.0% |
| ! | TTGATGCACCGGTGGTATCT+TGG | - | chr4_1:54804841-54804860 | Msa0556550:intron | 50.0% |
| GGTGGTATCTTGGCACATTG+AGG | - | chr4_1:54804851-54804870 | Msa0556550:intron | 50.0% | |
| AGCTTTGCTTAAGGTGGGCA+GGG | + | chr4_1:54805508-54805527 | None:intergenic | 50.0% | |
| GCAGGAGCTTTGCTTAAGGT+GGG | + | chr4_1:54805513-54805532 | None:intergenic | 50.0% | |
| AAGGGCAGGAGCTTTGCTTA+AGG | + | chr4_1:54805517-54805536 | None:intergenic | 50.0% | |
| ! | AAAGCTCCTGCCCTTGCTAT+TGG | - | chr4_1:54805522-54805541 | Msa0556550:intron | 50.0% |
| GTGCTGGAGTTTCTACTCCT+TGG | - | chr4_1:54805702-54805721 | Msa0556550:intron | 50.0% | |
| GACGATTGCTCTTGTACGCA+GGG | + | chr4_1:54806173-54806192 | None:intergenic | 50.0% | |
| ! | TGGCCTTGATGGATGCTTTG+AGG | + | chr4_1:54806233-54806252 | None:intergenic | 50.0% |
| ! | CAAAGCATCCATCAAGGCCA+TGG | - | chr4_1:54806233-54806252 | Msa0556550:CDS | 50.0% |
| !! | GCCTTAAGGAGTGTTGATGC+TGG | - | chr4_1:54806382-54806401 | Msa0556550:intron | 50.0% |
| CCCAGCATCAACACTCCTTA+AGG | + | chr4_1:54806386-54806405 | None:intergenic | 50.0% | |
| !! | GAGTGTTGATGCTGGGTACA+AGG | - | chr4_1:54806390-54806409 | Msa0556550:intron | 50.0% |
| GGGGCCGTGGCAATTTATAA+TGG | - | chr4_1:54806641-54806660 | Msa0556550:intron | 50.0% | |
| ! | AAGCCTTATCCCACTAAGGG+GGG | + | chr4_1:54807129-54807148 | None:intergenic | 50.0% |
| ! | CAAGCCTTATCCCACTAAGG+GGG | + | chr4_1:54807130-54807149 | None:intergenic | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+GGG | + | chr4_1:54807131-54807150 | None:intergenic | 50.0% |
| GCAACAAAGCTGCGGTGAAA+AGG | - | chr4_1:54807282-54807301 | Msa0556550:intron | 50.0% | |
| GAGGACTTTGCAGAGCGATT+TGG | - | chr4_1:54807725-54807744 | Msa0556550:intron | 50.0% | |
| ! | GACTTTGCAGAGCGATTTGG+AGG | - | chr4_1:54807728-54807747 | Msa0556550:intron | 50.0% |
| ACAGGAATGACCCTAGAGGA+AGG | + | chr4_1:54808323-54808342 | None:intergenic | 50.0% | |
| TTCCCTGCTAAACATTCCCC+CGG | + | chr4_1:54808807-54808826 | None:intergenic | 50.0% | |
| TTGATGTGGCAAGAGGAGAG+AGG | - | chr4_1:54808859-54808878 | Msa0556550:intron | 50.0% | |
| GGACTTCAGTCTACAACCTC+CGG | + | chr4_1:54808912-54808931 | None:intergenic | 50.0% | |
| GGGCAGATCGCAATAAAGGT+GGG | + | chr4_1:54809060-54809079 | None:intergenic | 50.0% | |
| CTAGGGGCAGATCGCAATAA+AGG | + | chr4_1:54809064-54809083 | None:intergenic | 50.0% | |
| AGCCAACACAAGGCAACTAG+GGG | + | chr4_1:54809080-54809099 | None:intergenic | 50.0% | |
| !! | GTTGCCTTGTGTTGGCTTTG+AGG | - | chr4_1:54809083-54809102 | Msa0556550:intron | 50.0% |
| !! | TGCCTTGTGTTGGCTTTGAG+GGG | - | chr4_1:54809085-54809104 | Msa0556550:intron | 50.0% |
| ! | GGGTGGATTTAGTCCCACAT+CGG | - | chr4_1:54809106-54809125 | Msa0556550:intron | 50.0% |
| CTAGGGGCAGATCGCAATAA+AGG | + | chr4_1:54809064-54809083 | None:intergenic | 50.0% | |
| AGCCAACTCAAGGCAACTAG+GGG | + | chr4_1:54809341-54809360 | None:intergenic | 50.0% | |
| !! | GTTGCCTTGAGTTGGCTTTG+AGG | - | chr4_1:54809344-54809363 | Msa0556550:intron | 50.0% |
| !! | TGCCTTGAGTTGGCTTTGAG+GGG | - | chr4_1:54809346-54809365 | Msa0556550:intron | 50.0% |
| ! | GGGTGGATTTAGTCCCACAT+CGG | - | chr4_1:54809106-54809125 | Msa0556550:intron | 50.0% |
| GCACTCCTAACCTTACAAGC+TGG | - | chr4_1:54809428-54809447 | Msa0556550:intron | 50.0% | |
| !! | GAAAGGTATTCCCGCTTCAG+GGG | - | chr4_1:54809951-54809970 | Msa0556550:intron | 50.0% |
| GCTATCAGTGCTTACGCAGA+AGG | - | chr4_1:54810917-54810936 | Msa0556550:intron | 50.0% | |
| TCTACCCAATGCCCATCTTC+TGG | - | chr4_1:54811329-54811348 | Msa0556550:CDS | 50.0% | |
| CTACCCAATGCCCATCTTCT+GGG | - | chr4_1:54811330-54811349 | Msa0556550:CDS | 50.0% | |
| ! | TCTGACTGGTCCCAGAAGAT+GGG | + | chr4_1:54811343-54811362 | None:intergenic | 50.0% |
| ! | TTCTGACTGGTCCCAGAAGA+TGG | + | chr4_1:54811344-54811363 | None:intergenic | 50.0% |
| ! | GTTTCAGTGTCGGAAACGGG+GGG | + | chr4_1:54800929-54800948 | None:intergenic | 55.0% |
| !! | TGGTGGTGGTGTGAATGCGA+CGG | + | chr4_1:54801121-54801140 | None:intergenic | 55.0% |
| AGAGTAGTTTCCGACGGTGG+TGG | + | chr4_1:54801141-54801160 | None:intergenic | 55.0% | |
| GTGCGCGTGAAGAACGAAGA+AGG | + | chr4_1:54801184-54801203 | None:intergenic | 55.0% | |
| CGGCATGTGCTAGATGACCA+TGG | + | chr4_1:54802182-54802201 | None:intergenic | 55.0% | |
| GGTCATCTAGCACATGCCGA+TGG | - | chr4_1:54802183-54802202 | Msa0556550:intron | 55.0% | |
| TAGGGCTTCATCCGCTAAGG+AGG | + | chr4_1:54803838-54803857 | None:intergenic | 55.0% | |
| ACTTCGGCGGCATAGAGCAA+TGG | + | chr4_1:54804340-54804359 | None:intergenic | 55.0% | |
| ! | ATCGGTGCAAGAGCTTGGTG+GGG | + | chr4_1:54804718-54804737 | None:intergenic | 55.0% |
| ACAAGCTGTTGATGCACCGG+TGG | - | chr4_1:54804833-54804852 | Msa0556550:intron | 55.0% | |
| TTGCTTAAGGTGGGCAGGGA+GGG | + | chr4_1:54805504-54805523 | None:intergenic | 55.0% | |
| TTTGCTTAAGGTGGGCAGGG+AGG | + | chr4_1:54805505-54805524 | None:intergenic | 55.0% | |
| GAGCTTTGCTTAAGGTGGGC+AGG | + | chr4_1:54805509-54805528 | None:intergenic | 55.0% | |
| GGCAGGAGCTTTGCTTAAGG+TGG | + | chr4_1:54805514-54805533 | None:intergenic | 55.0% | |
| GGACGATTGCTCTTGTACGC+AGG | + | chr4_1:54806174-54806193 | None:intergenic | 55.0% | |
| TGTTACTGAAAAGGGGGCCG+TGG | - | chr4_1:54806628-54806647 | Msa0556550:intron | 55.0% | |
| ! | CTCCTAAGACTTGCTCCACG+TGG | - | chr4_1:54806841-54806860 | Msa0556550:intron | 55.0% |
| CACCACGTGGAGCAAGTCTT+AGG | + | chr4_1:54806846-54806865 | None:intergenic | 55.0% | |
| ACTAAGGGGGGTCGAGTACA+TGG | + | chr4_1:54807117-54807136 | None:intergenic | 55.0% | |
| ATGTACTCGACCCCCCTTAG+TGG | - | chr4_1:54807116-54807135 | Msa0556550:intron | 55.0% | |
| TGTACTCGACCCCCCTTAGT+GGG | - | chr4_1:54807117-54807136 | Msa0556550:intron | 55.0% | |
| CCCCTTAGTGGGATAAGGCT+TGG | - | chr4_1:54807128-54807147 | Msa0556550:intron | 55.0% | |
| ! | GATGGTTTCGTTTGGAGCCG+AGG | - | chr4_1:54807706-54807725 | Msa0556550:intron | 55.0% |
| CACCCCTTATACTGGTCCAC+CGG | - | chr4_1:54808785-54808804 | Msa0556550:intron | 55.0% | |
| ACCCCTTATACTGGTCCACC+GGG | - | chr4_1:54808786-54808805 | Msa0556550:intron | 55.0% | |
| CACCGGGGGAATGTTTAGCA+GGG | - | chr4_1:54808802-54808821 | Msa0556550:intron | 55.0% | |
| GTGGCAAGAGGAGAGAGGTT+AGG | - | chr4_1:54808864-54808883 | Msa0556550:intron | 55.0% | |
| TTTGGTAAGGTTTGCGCCGG+AGG | - | chr4_1:54808893-54808912 | Msa0556550:intron | 55.0% | |
| GGGGCAGATCGCAATAAAGG+TGG | + | chr4_1:54809061-54809080 | None:intergenic | 55.0% | |
| TGCCCCTAGTTGCCTTGTGT+TGG | - | chr4_1:54809075-54809094 | Msa0556550:intron | 55.0% | |
| !! | GCCTTGTGTTGGCTTTGAGG+GGG | - | chr4_1:54809086-54809105 | Msa0556550:intron | 55.0% |
| ACCCCCTCAAAGCCAACACA+AGG | + | chr4_1:54809090-54809109 | None:intergenic | 55.0% | |
| !! | TTGTGTTGGCTTTGAGGGGG+TGG | - | chr4_1:54809089-54809108 | Msa0556550:intron | 55.0% |
| AATGGGCATGAAGCGTGGCA+AGG | + | chr4_1:54809267-54809286 | None:intergenic | 55.0% | |
| TTGCCACGCTTCATGCCCAT+TGG | - | chr4_1:54809266-54809285 | Msa0556550:intron | 55.0% | |
| TGCCACGCTTCATGCCCATT+GGG | - | chr4_1:54809267-54809286 | Msa0556550:intron | 55.0% | |
| TGCCCCTAGTTGCCTTGAGT+TGG | - | chr4_1:54809336-54809355 | Msa0556550:intron | 55.0% | |
| !! | GCCTTGAGTTGGCTTTGAGG+GGG | - | chr4_1:54809347-54809366 | Msa0556550:intron | 55.0% |
| ACCCCCTCAAAGCCAACTCA+AGG | + | chr4_1:54809351-54809370 | None:intergenic | 55.0% | |
| !! | TTGAGTTGGCTTTGAGGGGG+TGG | - | chr4_1:54809350-54809369 | Msa0556550:CDS | 55.0% |
| GGTCCCAGAAGATGGGCATT+GGG | + | chr4_1:54811336-54811355 | None:intergenic | 55.0% | |
| TGGTCCCAGAAGATGGGCAT+TGG | + | chr4_1:54811337-54811356 | None:intergenic | 55.0% | |
| GTGGTGTGAATGCGACGGAG+AGG | + | chr4_1:54801116-54801135 | None:intergenic | 60.0% | |
| ! | GTAGTTTCCGACGGTGGTGG+TGG | + | chr4_1:54801138-54801157 | None:intergenic | 60.0% |
| GCGAGAGTAGTTTCCGACGG+TGG | + | chr4_1:54801144-54801163 | None:intergenic | 60.0% | |
| TTCACGCGCACCACTCTCCA+AGG | - | chr4_1:54801193-54801212 | Msa0556550:three_prime_UTR | 60.0% | |
| GCTGCTCAACCCGTGCACAT+TGG | - | chr4_1:54801402-54801421 | Msa0556550:CDS | 60.0% | |
| ATTGGCCGCAGCTTCGGCAT+TGG | + | chr4_1:54801436-54801455 | None:intergenic | 60.0% | |
| AATGCCGAAGCTGCGGCCAA+TGG | - | chr4_1:54801435-54801454 | Msa0556550:CDS | 60.0% | |
| TCTGCCATTGGCCGCAGCTT+CGG | + | chr4_1:54801442-54801461 | None:intergenic | 60.0% | |
| CTCTCTAAGCAGCCAGGCTC+TGG | + | chr4_1:54805354-54805373 | None:intergenic | 60.0% | |
| CGACCCCCCTTAGTGGGATA+AGG | - | chr4_1:54807123-54807142 | Msa0556550:intron | 60.0% | |
| CCCCGGTGGACCAGTATAAG+GGG | + | chr4_1:54808790-54808809 | None:intergenic | 60.0% | |
| CCCCTTATACTGGTCCACCG+GGG | - | chr4_1:54808787-54808806 | Msa0556550:intron | 60.0% | |
| CCCCCGGTGGACCAGTATAA+GGG | + | chr4_1:54808791-54808810 | None:intergenic | 60.0% | |
| CCCTTATACTGGTCCACCGG+GGG | - | chr4_1:54808788-54808807 | Msa0556550:intron | 60.0% | |
| TCCCCCGGTGGACCAGTATA+AGG | + | chr4_1:54808792-54808811 | None:intergenic | 60.0% | |
| CCTGCTAAACATTCCCCCGG+TGG | + | chr4_1:54808804-54808823 | None:intergenic | 60.0% | |
| CCACCGGGGGAATGTTTAGC+AGG | - | chr4_1:54808801-54808820 | Msa0556550:intron | 60.0% | |
| GTTGGAAATCCCGCCTCGAG+CGG | - | chr4_1:54809015-54809034 | Msa0556550:intron | 60.0% | |
| TTGGAAATCCCGCCTCGAGC+GGG | - | chr4_1:54809016-54809035 | Msa0556550:intron | 60.0% | |
| GCACCCCTCACCTTACAAGC+TGG | - | chr4_1:54809167-54809186 | Msa0556550:intron | 60.0% | |
| GACCCAATGGGCATGAAGCG+TGG | + | chr4_1:54809272-54809291 | None:intergenic | 60.0% | |
| CCTTGGGAGCCACAAACCTC+GGG | + | chr4_1:54810414-54810433 | None:intergenic | 60.0% | |
| GCCTTGGGAGCCACAAACCT+CGG | + | chr4_1:54810415-54810434 | None:intergenic | 60.0% | |
| ! | CAGTGTCGGAAACGGGGGGA+GGG | + | chr4_1:54800925-54800944 | None:intergenic | 65.0% |
| ! | TCAGTGTCGGAAACGGGGGG+AGG | + | chr4_1:54800926-54800945 | None:intergenic | 65.0% |
| CACACCACCACCACCACCGT+CGG | - | chr4_1:54801128-54801147 | Msa0556550:three_prime_UTR | 65.0% | |
| !! | GTTTCCGACGGTGGTGGTGG+TGG | + | chr4_1:54801135-54801154 | None:intergenic | 65.0% |
| !! | TTCTGGAGGCACCGTTCCGG+TGG | + | chr4_1:54801370-54801389 | None:intergenic | 65.0% |
| GGGCATGAAGCGTGGCAAGG+CGG | + | chr4_1:54809264-54809283 | None:intergenic | 65.0% | |
| CCCTCACGCTCGGACCCAAT+GGG | + | chr4_1:54809284-54809303 | None:intergenic | 65.0% | |
| CCCATTGGGTCCGAGCGTGA+GGG | - | chr4_1:54809281-54809300 | Msa0556550:intron | 65.0% | |
| CCATTGGGTCCGAGCGTGAG+GGG | - | chr4_1:54809282-54809301 | Msa0556550:intron | 65.0% | |
| CATTGGGTCCGAGCGTGAGG+GGG | - | chr4_1:54809283-54809302 | Msa0556550:intron | 65.0% | |
| ATTGGGTCCGAGCGTGAGGG+GGG | - | chr4_1:54809284-54809303 | Msa0556550:intron | 65.0% | |
| CCCGAGGTTTGTGGCTCCCA+AGG | - | chr4_1:54810411-54810430 | Msa0556550:intron | 65.0% | |
| !! | GGAGGCACCGTTCCGGTGGT+TGG | + | chr4_1:54801366-54801385 | None:intergenic | 70.0% |
| GAAATCCCGCCTCGAGCGGG+AGG | - | chr4_1:54809019-54809038 | Msa0556550:intron | 70.0% | |
| AACACCCCTCCTCCCGCTCG+AGG | + | chr4_1:54809031-54809050 | None:intergenic | 70.0% | |
| ! | TCGAGCGGGAGGAGGGGTGT+TGG | - | chr4_1:54809030-54809049 | Msa0556550:intron | 70.0% |
| GCCCATTGGGTCCGAGCGTG+AGG | - | chr4_1:54809280-54809299 | Msa0556550:intron | 70.0% | |
| CCCCTCACGCTCGGACCCAA+TGG | + | chr4_1:54809285-54809304 | None:intergenic | 70.0% | |
| TTGGGTCCGAGCGTGAGGGG+GGG | - | chr4_1:54809285-54809304 | Msa0556550:intron | 70.0% | |
| CCAACACCCCCCCTCACGCT+CGG | + | chr4_1:54809294-54809313 | None:intergenic | 70.0% | |
| ATCCCGCCTCGAGCGGGAGG+AGG | - | chr4_1:54809022-54809041 | Msa0556550:intron | 75.0% | |
| TCCCGCCTCGAGCGGGAGGA+GGG | - | chr4_1:54809023-54809042 | Msa0556550:intron | 75.0% | |
| ACCCCTCCTCCCGCTCGAGG+CGG | + | chr4_1:54809028-54809047 | None:intergenic | 75.0% | |
| ! | CCGAGCGTGAGGGGGGGTGT+TGG | - | chr4_1:54809291-54809310 | Msa0556550:intron | 75.0% |
| ! | CCCCTCCTCCCGCTCGAGGC+GGG | + | chr4_1:54809027-54809046 | None:intergenic | 80.0% |
| ! | CCCGCCTCGAGCGGGAGGAG+GGG | - | chr4_1:54809024-54809043 | Msa0556550:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 54800922 | 54811475 | 54800922 | ID=Msa0556550;Name=Msa0556550 |
| chr4_1 | mRNA | 54800922 | 54811475 | 54800922 | ID=Msa0556550-mRNA-1;Parent=Msa0556550;Name=Msa0556550-mRNA-1;_AED=0.09;_eAED=0.09;_QI=122|0.76|0.85|1|1|1|14|472|389 |
| chr4_1 | exon | 54800922 | 54801513 | 54800922 | ID=Msa0556550-mRNA-1:exon:16260;Parent=Msa0556550-mRNA-1 |
| chr4_1 | exon | 54801981 | 54802055 | 54801981 | ID=Msa0556550-mRNA-1:exon:16259;Parent=Msa0556550-mRNA-1 |
| chr4_1 | exon | 54802442 | 54802500 | 54802442 | ID=Msa0556550-mRNA-1:exon:16258;Parent=Msa0556550-mRNA-1 |
| chr4_1 | exon | 54803835 | 54803885 | 54803835 | ID=Msa0556550-mRNA-1:exon:16257;Parent=Msa0556550-mRNA-1 |
| chr4_1 | exon | 54804582 | 54804691 | 54804582 | ID=Msa0556550-mRNA-1:exon:16256;Parent=Msa0556550-mRNA-1 |
| chr4_1 | exon | 54805528 | 54805613 | 54805528 | ID=Msa0556550-mRNA-1:exon:16255;Parent=Msa0556550-mRNA-1 |
| chr4_1 | exon | 54805986 | 54806054 | 54805986 | ID=Msa0556550-mRNA-1:exon:16254;Parent=Msa0556550-mRNA-1 |
| chr4_1 | exon | 54806134 | 54806252 | 54806134 | ID=Msa0556550-mRNA-1:exon:16253;Parent=Msa0556550-mRNA-1 |
| chr4_1 | exon | 54807317 | 54807370 | 54807317 | ID=Msa0556550-mRNA-1:exon:16252;Parent=Msa0556550-mRNA-1 |
| chr4_1 | exon | 54809168 | 54809186 | 54809168 | ID=Msa0556550-mRNA-1:exon:16251;Parent=Msa0556550-mRNA-1 |
| chr4_1 | exon | 54809350 | 54809388 | 54809350 | ID=Msa0556550-mRNA-1:exon:16250;Parent=Msa0556550-mRNA-1 |
| chr4_1 | exon | 54810149 | 54810228 | 54810149 | ID=Msa0556550-mRNA-1:exon:16249;Parent=Msa0556550-mRNA-1 |
| chr4_1 | exon | 54810974 | 54811091 | 54810974 | ID=Msa0556550-mRNA-1:exon:16248;Parent=Msa0556550-mRNA-1 |
| chr4_1 | exon | 54811183 | 54811475 | 54811183 | ID=Msa0556550-mRNA-1:exon:16247;Parent=Msa0556550-mRNA-1 |
| chr4_1 | five_prime_UTR | 54811354 | 54811475 | 54811354 | ID=Msa0556550-mRNA-1:five_prime_utr;Parent=Msa0556550-mRNA-1 |
| chr4_1 | CDS | 54811183 | 54811353 | 54811183 | ID=Msa0556550-mRNA-1:cds;Parent=Msa0556550-mRNA-1 |
| chr4_1 | CDS | 54810974 | 54811091 | 54810974 | ID=Msa0556550-mRNA-1:cds;Parent=Msa0556550-mRNA-1 |
| chr4_1 | CDS | 54810149 | 54810228 | 54810149 | ID=Msa0556550-mRNA-1:cds;Parent=Msa0556550-mRNA-1 |
| chr4_1 | CDS | 54809350 | 54809388 | 54809350 | ID=Msa0556550-mRNA-1:cds;Parent=Msa0556550-mRNA-1 |
| chr4_1 | CDS | 54809168 | 54809186 | 54809168 | ID=Msa0556550-mRNA-1:cds;Parent=Msa0556550-mRNA-1 |
| chr4_1 | CDS | 54807317 | 54807370 | 54807317 | ID=Msa0556550-mRNA-1:cds;Parent=Msa0556550-mRNA-1 |
| chr4_1 | CDS | 54806134 | 54806252 | 54806134 | ID=Msa0556550-mRNA-1:cds;Parent=Msa0556550-mRNA-1 |
| chr4_1 | CDS | 54805986 | 54806054 | 54805986 | ID=Msa0556550-mRNA-1:cds;Parent=Msa0556550-mRNA-1 |
| chr4_1 | CDS | 54805528 | 54805613 | 54805528 | ID=Msa0556550-mRNA-1:cds;Parent=Msa0556550-mRNA-1 |
| chr4_1 | CDS | 54804582 | 54804691 | 54804582 | ID=Msa0556550-mRNA-1:cds;Parent=Msa0556550-mRNA-1 |
| chr4_1 | CDS | 54803835 | 54803885 | 54803835 | ID=Msa0556550-mRNA-1:cds;Parent=Msa0556550-mRNA-1 |
| chr4_1 | CDS | 54802442 | 54802500 | 54802442 | ID=Msa0556550-mRNA-1:cds;Parent=Msa0556550-mRNA-1 |
| chr4_1 | CDS | 54801981 | 54802055 | 54801981 | ID=Msa0556550-mRNA-1:cds;Parent=Msa0556550-mRNA-1 |
| chr4_1 | CDS | 54801394 | 54801513 | 54801394 | ID=Msa0556550-mRNA-1:cds;Parent=Msa0556550-mRNA-1 |
| chr4_1 | three_prime_UTR | 54800922 | 54801393 | 54800922 | ID=Msa0556550-mRNA-1:three_prime_utr;Parent=Msa0556550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
