AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1428050


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1428050 MtrunA17_Chr1g0203131 93.452 733 16 1 1 701 636 1368 0.0 1390
Msa1428050 MtrunA17_Chr6g0472241 71.253 734 172 3 1 701 597 1324 0.0 1095
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1428050 AT4G20850.1 61.853 734 230 5 1 701 664 1380 0.0 924

Find 165 sgRNAs with CRISPR-Local

Find 489 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAATAAGTCAACCTTATT+TGG 0.153575 tig0026289:+62455 None:intergenic
AGCAGAAATTGAGTCTTTAA+AGG 0.172609 tig0026289:-59712 Msa1428050:intron
GCATGAAGACTTGCAGATTT+TGG 0.179437 tig0026289:-63421 Msa1428050:CDS
TTGGCGTCTTCATGAAATTT+AGG 0.202555 tig0026289:+66732 None:intergenic
CGCCAACAAGCTTGAAGATT+TGG 0.221564 tig0026289:-66715 Msa1428050:CDS
CTGACCACTTACTACCTTAA+AGG 0.227567 tig0026289:+64696 None:intergenic
CTACATATTTCCTTTCTATA+TGG 0.240203 tig0026289:+64951 None:intergenic
GACGTTAAGTGCACAAAATA+TGG 0.248807 tig0026289:-59204 Msa1428050:CDS
AATTAATGTTGAGGACTTAA+AGG 0.254585 tig0026289:+62833 None:intergenic
TTTGTTTGATGAAAACTTTA+AGG 0.264275 tig0026289:-59244 Msa1428050:CDS
TATGATGCAGGGTGCTTCTC+TGG 0.274528 tig0026289:+62500 None:intergenic
TATGATTTCCGATTCAAATA+AGG 0.274716 tig0026289:-63927 Msa1428050:intron
TTATATAGTTCCTCCAAATA+AGG 0.279280 tig0026289:-62468 Msa1428050:intron
TCCGTTGCTTGCAAAGATTT+TGG 0.294180 tig0026289:-61135 Msa1428050:CDS
CATAAGCTTTAAGATATCTT+AGG 0.299823 tig0026289:-58727 Msa1428050:three_prime_UTR
ACGTTCAGAAACAGTCTTCT+TGG 0.302120 tig0026289:+62226 None:intergenic
TGTAAACTGTATTCTCCTTT+GGG 0.304910 tig0026289:+63729 None:intergenic
CTGCTAGTGCAAGCCCCTTC+TGG 0.307612 tig0026289:+59730 None:intergenic
TTGTAAACTGTATTCTCCTT+TGG 0.312119 tig0026289:+63728 None:intergenic
TTTCAGATACAAGGTCAAAT+TGG 0.315141 tig0026289:-64029 Msa1428050:intron
AAATTCCAGATTGTGTTTCA+TGG 0.325625 tig0026289:-64438 Msa1428050:intron
ACCTTGGGAAGCTTGTCTTT+TGG 0.334662 tig0026289:+62683 None:intergenic
ATGAGTGAGCAGTAGATATT+CGG 0.340979 tig0026289:+66635 None:intergenic
ACCTGTAGCAAATCTAAATA+AGG 0.344637 tig0026289:-64322 Msa1428050:intron
TTAGAATCTACAGGTCGATA+TGG 0.346444 tig0026289:+64196 None:intergenic
TTCTACTCTCAGCATATTAG+TGG 0.352367 tig0026289:-65523 Msa1428050:intron
CTCTCTTTGCTTGAAGAAGT+TGG 0.357693 tig0026289:-58881 Msa1428050:CDS
AGCTAGTCATAGCTCAGTTT+TGG 0.361011 tig0026289:-64666 Msa1428050:CDS
TGAGAGAAATTTAGAAGATA+AGG 0.369665 tig0026289:-63370 Msa1428050:intron
CCTTCTGTTGTAGCTGCAGC+CGG 0.371225 tig0026289:+59312 None:intergenic
AAGGAACCATTTCCCATCAA+TGG 0.378497 tig0026289:+62852 None:intergenic
CCTCAAATACCATTTCTAAA+TGG 0.379337 tig0026289:-63986 Msa1428050:CDS
AAGTCCTCAACATTAATTCC+AGG 0.380000 tig0026289:-62828 Msa1428050:CDS
AATGTCCAAGGGATGGTAAA+TGG 0.381665 tig0026289:+58649 None:intergenic
TGCTACAGGTGTAAGTTTCT+CGG 0.382430 tig0026289:+64335 None:intergenic
GGTAAAGTGCCTCTGCTAAC+TGG 0.383134 tig0026289:+59751 None:intergenic
AACCAAATCTTCAAGCTTGT+TGG 0.387907 tig0026289:+66713 None:intergenic
TCATCCTTTGATTGCTCGTC+GGG 0.388840 tig0026289:+59282 None:intergenic
TTTCCCATCAATGGGCCATC+TGG 0.389572 tig0026289:+62861 None:intergenic
CAAGAGGTAATTGTACTTGA+TGG 0.390915 tig0026289:-64402 Msa1428050:CDS
ACTTTAAGGAACTGAAGAAA+TGG 0.402563 tig0026289:-59230 Msa1428050:CDS
TTTCATTAGGCCATATAGAA+AGG 0.410284 tig0026289:-64961 Msa1428050:intron
ATCAAAACTTGATAAGTTCA+TGG 0.410948 tig0026289:+64895 None:intergenic
TCGCAATACCTTATTTGAAT+CGG 0.415181 tig0026289:+63919 None:intergenic
AAAGCTTATGCTGATGCAAC+TGG 0.419701 tig0026289:+58740 None:intergenic
TATGGAAAACTATCATTTGC+CGG 0.430490 tig0026289:-62542 Msa1428050:CDS
CCATTTAGAAATGGTATTTG+AGG 0.440117 tig0026289:+63986 None:intergenic
CCCTAGAAAAGGGGTAGGCT+AGG 0.440240 tig0026289:+58806 None:intergenic
AAACCCATACAAAACATGAT+TGG 0.445766 tig0026289:+58697 None:intergenic
CTTATTGATAGCATAAAAGA+AGG 0.446003 tig0026289:-62725 Msa1428050:intron
CATTGCAAAGACCTTTGAAA+TGG 0.447462 tig0026289:-64762 Msa1428050:CDS
AAAACTATCATTTGCCGGAC+AGG 0.448302 tig0026289:-62537 Msa1428050:CDS
GACTACGAATGTGGATCTTA+AGG 0.448785 tig0026289:-64620 Msa1428050:intron
AGACCATCACATAAATTGAT+AGG 0.451410 tig0026289:+65498 None:intergenic
TAAGCCAGATGGCCCATTGA+TGG 0.454888 tig0026289:-62865 Msa1428050:CDS
GTGCCTCTGCTAACTGGTCC+CGG 0.456843 tig0026289:+59757 None:intergenic
GATGGCCCATTGATGGGAAA+TGG 0.457766 tig0026289:-62858 Msa1428050:CDS
GCTTCTCGTGTGTCACCAAC+AGG 0.458893 tig0026289:+59178 None:intergenic
AGGAACCATTTCCCATCAAT+GGG 0.462121 tig0026289:+62853 None:intergenic
TGAGTGAGCAGTAGATATTC+GGG 0.462701 tig0026289:+66636 None:intergenic
GCAAGCAACGGAGTGTACTT+TGG 0.463823 tig0026289:+61146 None:intergenic
CAGATGGAAAACCCTAGAAA+AGG 0.464019 tig0026289:+58795 None:intergenic
AGTTGATGCAGAAGCACTAC+TGG 0.464268 tig0026289:-64361 Msa1428050:CDS
TATGTACCTCTTCATGATGA+TGG 0.464713 tig0026289:+61075 None:intergenic
AGATGGAAAACCCTAGAAAA+GGG 0.464968 tig0026289:+58796 None:intergenic
TTTGGAAAAGATGAAGCATC+TGG 0.467739 tig0026289:-63403 Msa1428050:CDS
TATATCCGACCATTTAGAAA+TGG 0.468165 tig0026289:+63977 None:intergenic
TTTCAATTATATATGCATCA+AGG 0.469563 tig0026289:-58677 Msa1428050:three_prime_UTR
CTTTGCTTGAAGAAGTTGGA+TGG 0.470175 tig0026289:-58877 Msa1428050:CDS
CTTCTGTTGTAGCTGCAGCC+GGG 0.473046 tig0026289:+59313 None:intergenic
CCTAGAAAAGGGGTAGGCTA+GGG 0.474233 tig0026289:+58807 None:intergenic
AAGGATTGGGACAGCATTGA+AGG 0.474927 tig0026289:-59148 Msa1428050:intron
GATTGCCATTTACCATCCCT+TGG 0.474976 tig0026289:-58654 Msa1428050:three_prime_UTR
TTCAATTATATATGCATCAA+GGG 0.479928 tig0026289:-58676 Msa1428050:three_prime_UTR
CTTTAAGGAACTGAAGAAAT+GGG 0.482645 tig0026289:-59229 Msa1428050:CDS
TAAGAAATTCGATATGATGC+AGG 0.483138 tig0026289:+62488 None:intergenic
TCCAAAATCTTTGCAAGCAA+CGG 0.483439 tig0026289:+61134 None:intergenic
AAGTGCCACATGGTGCATCT+TGG 0.484346 tig0026289:-64928 Msa1428050:CDS
AGTGCCACATGGTGCATCTT+GGG 0.485268 tig0026289:-64927 Msa1428050:CDS
GGTAATTAATGCAGCAAATG+AGG 0.489459 tig0026289:-60467 Msa1428050:CDS
ACAGTTTACAACTATATGTA+AGG 0.491738 tig0026289:-63716 Msa1428050:intron
TCATATAGTTTCTTCTTCGC+AGG 0.493309 tig0026289:+58911 None:intergenic
TTCACCTTTAAGGTAGTAAG+TGG 0.494490 tig0026289:-64700 Msa1428050:CDS
TAGAATCTACAGGTCGATAT+GGG 0.501545 tig0026289:+64197 None:intergenic
ACCTTATTTAGATTTGCTAC+AGG 0.502093 tig0026289:+64321 None:intergenic
TTCTGAACGTTTAGAAGAAG+AGG 0.503638 tig0026289:-62213 Msa1428050:intron
CTCTCTGCAAGGATCTGTAT+TGG 0.504930 tig0026289:-62579 Msa1428050:CDS
ATGATGCAGGGTGCTTCTCT+GGG 0.506852 tig0026289:+62501 None:intergenic
GTGATGAAGATCTCTTAGAA+TGG 0.512658 tig0026289:-61394 Msa1428050:CDS
GATCGTGACAAACTCCCCTC+TGG 0.512764 tig0026289:-64154 Msa1428050:CDS
AATAAGTCAACCTTATTTGG+AGG 0.512986 tig0026289:+62458 None:intergenic
ATCATCCTTTGATTGCTCGT+CGG 0.514303 tig0026289:+59281 None:intergenic
TGTGATTATTACAATGTCCA+AGG 0.515799 tig0026289:+58637 None:intergenic
AAACTATCATTTGCCGGACA+GGG 0.515868 tig0026289:-62536 Msa1428050:CDS
TATCTACTGCTCACTCATAA+CGG 0.517636 tig0026289:-66630 Msa1428050:CDS
AGAAGCGTAGTCAAAGGATT+GGG 0.521199 tig0026289:-59161 Msa1428050:CDS
ACGTTAAGTGCACAAAATAT+GGG 0.522085 tig0026289:-59203 Msa1428050:CDS
TTGGTCGGATCAATATCATA+TGG 0.525869 tig0026289:-62560 Msa1428050:CDS
CAGTATTGATAGAGAAGAGC+TGG 0.528051 tig0026289:-60437 Msa1428050:CDS
GAGAAGCGTAGTCAAAGGAT+TGG 0.531125 tig0026289:-59162 Msa1428050:CDS
CATTTCAAAGGTCTTTGCAA+TGG 0.531844 tig0026289:+64763 None:intergenic
AGGTTATGATTTCAGATACA+AGG 0.532117 tig0026289:-64038 Msa1428050:intron
AAGCCAGATGGCCCATTGAT+GGG 0.533768 tig0026289:-62864 Msa1428050:CDS
AAGAGGTAATTGTACTTGAT+GGG 0.538804 tig0026289:-64401 Msa1428050:CDS
ATGTACCTCTTCATGATGAT+GGG 0.541503 tig0026289:+61076 None:intergenic
TACAAGGTCAAATTGGATGA+TGG 0.543337 tig0026289:-64022 Msa1428050:CDS
CAGAGGCACTTTACCAGAAG+GGG 0.544874 tig0026289:-59743 Msa1428050:CDS
AAATACCATTTCTAAATGGT+CGG 0.547424 tig0026289:-63982 Msa1428050:CDS
ATAACACTCCGCCATTTCAA+AGG 0.548584 tig0026289:+64751 None:intergenic
TTCTGTTGTAGCTGCAGCCG+GGG 0.548833 tig0026289:+59314 None:intergenic
GCTTCTGCATCAACTCTGAC+AGG 0.550118 tig0026289:+64369 None:intergenic
CCGGCTGCAGCTACAACAGA+AGG 0.550127 tig0026289:-59312 Msa1428050:CDS
CCATACAAAACATGATTGGA+TGG 0.551186 tig0026289:+58701 None:intergenic
GTGATTATTACAATGTCCAA+GGG 0.554107 tig0026289:+58638 None:intergenic
AGCAGAGGCACTTTACCAGA+AGG 0.554993 tig0026289:-59745 Msa1428050:CDS
TGCCTCTGCTAACTGGTCCC+GGG 0.558075 tig0026289:+59758 None:intergenic
GATCCTATCAATTTATGTGA+TGG 0.558273 tig0026289:-65501 Msa1428050:CDS
AGTCCTCAACATTAATTCCA+GGG 0.561028 tig0026289:-62827 Msa1428050:intron
CTGCATTATTACGAAGTCTA+CGG 0.561030 tig0026289:-65477 Msa1428050:CDS
GCGCTGATCTTAGAATCTAC+AGG 0.561479 tig0026289:+64187 None:intergenic
ACAGCAACCTGTTTCACAGA+TGG 0.562569 tig0026289:+58779 None:intergenic
GGTAGTAAGTGGTCAGACAT+TGG 0.566035 tig0026289:-64689 Msa1428050:CDS
TGCAAAGACCTTTGAAATGG+CGG 0.566121 tig0026289:-64759 Msa1428050:CDS
CTGCAAGGATCTGTATTGGT+CGG 0.572910 tig0026289:-62575 Msa1428050:CDS
GACGAGCAATCAAAGGATGA+TGG 0.574238 tig0026289:-59279 Msa1428050:CDS
ATCTGTGAAACAGGTTGCTG+TGG 0.579615 tig0026289:-58777 Msa1428050:three_prime_UTR
AACTATCATTTGCCGGACAG+GGG 0.579701 tig0026289:-62535 Msa1428050:CDS
GCTAGCATCTGCTTTCCAGA+GGG 0.584019 tig0026289:+64139 None:intergenic
TTGAAGATTGACGAGGACAA+AGG 0.586919 tig0026289:-62266 Msa1428050:intron
GCAGAGGCACTTTACCAGAA+GGG 0.587605 tig0026289:-59744 Msa1428050:CDS
CTAGAAAAGGGGTAGGCTAG+GGG 0.589557 tig0026289:+58808 None:intergenic
TCTGGATGATGAGGAAGCAC+AGG 0.591158 tig0026289:-60389 Msa1428050:intron
CAAATCCCATCATCATGAAG+AGG 0.596201 tig0026289:-61081 Msa1428050:intron
CAAGTTGTCTGTCTTGCTCA+AGG 0.599606 tig0026289:-61369 Msa1428050:intron
TGAAACAGGTTGCTGTGGAA+TGG 0.603611 tig0026289:-58772 Msa1428050:three_prime_UTR
TTATGCTGATGCAACTGGCA+AGG 0.610247 tig0026289:+58745 None:intergenic
AAATCCCGACGAGCAATCAA+AGG 0.611229 tig0026289:-59286 Msa1428050:CDS
GTAAACTGTATTCTCCTTTG+GGG 0.619626 tig0026289:+63730 None:intergenic
ACTATCATTTGCCGGACAGG+GGG 0.620586 tig0026289:-62534 Msa1428050:CDS
TGCTAGCATCTGCTTTCCAG+AGG 0.621309 tig0026289:+64138 None:intergenic
AAGAAATTCGATATGATGCA+GGG 0.621386 tig0026289:+62489 None:intergenic
GAAAAGTGATCTGGATGATG+AGG 0.626476 tig0026289:-60398 Msa1428050:CDS
TAGAAAAGGGGTAGGCTAGG+GGG 0.629050 tig0026289:+58809 None:intergenic
GAGTCATGAGACTACGAATG+TGG 0.630387 tig0026289:-64629 Msa1428050:CDS
CACACGAGAAGCGTAGTCAA+AGG 0.632931 tig0026289:-59167 Msa1428050:CDS
GACTGCAAAGCACCATGGCG+TGG 0.633533 tig0026289:-65450 Msa1428050:intron
CTGAAAAGAGGACCACGCCA+TGG 0.635156 tig0026289:+65438 None:intergenic
TTATTACAATGTCCAAGGGA+TGG 0.641354 tig0026289:+58642 None:intergenic
TGGTATAAAAGCTAGTCAAG+AGG 0.642711 tig0026289:-64418 Msa1428050:CDS
TTTCCACAGAACTCTCTGCA+AGG 0.644061 tig0026289:-62590 Msa1428050:intron
GAAAACCCTAGAAAAGGGGT+AGG 0.645637 tig0026289:+58801 None:intergenic
TTATAGCGAGTATATTCAAG+TGG 0.646443 tig0026289:-63780 Msa1428050:intron
ACCAAAAGACAAGCTTCCCA+AGG 0.652371 tig0026289:-62684 Msa1428050:intron
AAAGGAGGTAGATAACTCCC+CGG 0.654856 tig0026289:-59331 Msa1428050:intron
GATGGAAAACCCTAGAAAAG+GGG 0.660746 tig0026289:+58797 None:intergenic
TAGCTACATATGAGAGACAG+TGG 0.664731 tig0026289:-58847 Msa1428050:CDS
AACTCTACAAAACTCCCCAA+AGG 0.668256 tig0026289:-63744 Msa1428050:CDS
AACCCGGGACCAGTTAGCAG+AGG 0.677676 tig0026289:-59760 Msa1428050:CDS
GTACCCTGGAATTAATGTTG+AGG 0.679471 tig0026289:+62824 None:intergenic
CTAGCATCTGCTTTCCAGAG+GGG 0.683016 tig0026289:+64140 None:intergenic
CACAAAATATGGGATCCTGT+TGG 0.693669 tig0026289:-59193 Msa1428050:CDS
CTTGTGTTTGAAGATTGACG+AGG 0.696535 tig0026289:-62273 Msa1428050:intron
AAATATGTAGAAGTGCCACA+TGG 0.705631 tig0026289:-64938 Msa1428050:CDS
GTATTGACTGCAAAGCACCA+TGG 0.709040 tig0026289:-65455 Msa1428050:CDS
TCAACCCAAGATGCACCATG+TGG 0.743143 tig0026289:+64923 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATAAAATATATATTTA+AGG - tig0026289:59124-59143 Msa1428050:intron 0.0%
!! TAAAAAAATCATATGAAAAT+TGG - tig0026289:59232-59251 Msa1428050:CDS 10.0%
!! CTTAAAAAATAATTGAATTT+GGG + tig0026289:62308-62327 None:intergenic 10.0%
!! TCTTAAAAAATAATTGAATT+TGG + tig0026289:62309-62328 None:intergenic 10.0%
!! TCTCAAATATAATTAAAAAT+GGG - tig0026289:63519-63538 Msa1428050:intron 10.0%
!! TTACACTTAAAATCTATAAA+AGG - tig0026289:59055-59074 Msa1428050:intron 15.0%
!! AATATGTAGGAATATAATTA+TGG + tig0026289:59086-59105 None:intergenic 15.0%
!!! TCTTAATTTTTTGTTTCATT+AGG - tig0026289:60407-60426 Msa1428050:CDS 15.0%
!! AATATAAATGAAACAGATAA+TGG + tig0026289:61297-61316 None:intergenic 15.0%
!! TATAAATTATATCCTCTTTA+AGG + tig0026289:62377-62396 None:intergenic 15.0%
!! TTAATATGTAACAACATTTA+TGG - tig0026289:62766-62785 Msa1428050:intron 15.0%
!! TAATTATATTTGAGAGAATA+TGG + tig0026289:63514-63533 None:intergenic 15.0%
!! CTCTCAAATATAATTAAAAA+TGG - tig0026289:63518-63537 Msa1428050:intron 15.0%
!! GTTAATAATATAATCCAAAA+CGG - tig0026289:63541-63560 Msa1428050:intron 15.0%
!! AAAAAACTTAAAAACTTACT+TGG + tig0026289:64779-64798 None:intergenic 15.0%
!! CTCTATTTATTCAAAATAAA+GGG - tig0026289:65077-65096 Msa1428050:intron 15.0%
!! TTAAATAGAAAGGATAAATA+TGG + tig0026289:65186-65205 None:intergenic 15.0%
!!! ATAAACTTTTAATACACTTT+TGG + tig0026289:65438-65457 None:intergenic 15.0%
!!! TTGTTTAGCTAAATTTTTTA+TGG - tig0026289:65465-65484 Msa1428050:CDS 15.0%
!! AAGCTATAAATTAGTTGAAA+AGG + tig0026289:58830-58849 None:intergenic 20.0%
!!! TTGTTTAACTTGTTTATAAG+AGG - tig0026289:58848-58867 Msa1428050:CDS 20.0%
!!! TTTTTTGTTCTATTTAACAG+AGG + tig0026289:58988-59007 None:intergenic 20.0%
!! AGCTACTTAAATAAATCTTT+AGG - tig0026289:59402-59421 Msa1428050:intron 20.0%
!! TTTAAGTAAGAAACATGATA+AGG + tig0026289:59428-59447 None:intergenic 20.0%
!! ATTAACATTGTCATAATTTG+AGG - tig0026289:59532-59551 Msa1428050:intron 20.0%
!! TTGAAACAAAACTATAGATT+AGG + tig0026289:59817-59836 None:intergenic 20.0%
!! AAAATTAAGACAATAAGCAT+TGG + tig0026289:60397-60416 None:intergenic 20.0%
!! AAAGAAGAATTAAGAAAAGT+GGG - tig0026289:60874-60893 Msa1428050:intron 20.0%
!! AATTAGTAAAATCGTATCTT+CGG + tig0026289:60917-60936 None:intergenic 20.0%
!! TAAGGTTATCTTGTAAAATT+TGG - tig0026289:61077-61096 Msa1428050:intron 20.0%
!!! GTTGTATTTTGAAAACTTTA+TGG - tig0026289:62040-62059 Msa1428050:intron 20.0%
!! AAAATACATCATCAAAACTA+AGG - tig0026289:62402-62421 Msa1428050:intron 20.0%
!! TTTAAATGTAAACCTTTAAG+AGG + tig0026289:62608-62627 None:intergenic 20.0%
!!! ATAAAAGAAGGATTTTATCT+TGG - tig0026289:62668-62687 Msa1428050:intron 20.0%
!! ATGTTGTTACATATTAACAA+TGG + tig0026289:62763-62782 None:intergenic 20.0%
!! AAAAAATGATAGATAAACCT+TGG - tig0026289:63676-63695 Msa1428050:intron 20.0%
!!! TTAAGTGAATTTTTTGGATA+TGG + tig0026289:63818-63837 None:intergenic 20.0%
!!! AGAACTTTAAGTGAATTTTT+TGG + tig0026289:63824-63843 None:intergenic 20.0%
!!! TTTGCTATTATTTGTAATCT+AGG + tig0026289:64185-64204 None:intergenic 20.0%
!!! CTTCAAAGATATTAGATTTT+AGG + tig0026289:64427-64446 None:intergenic 20.0%
!! ATGATAATTACATAATTGCA+CGG + tig0026289:64739-64758 None:intergenic 20.0%
!!! TTTTTTTAAATTCACGACAT+TGG - tig0026289:64793-64812 Msa1428050:intron 20.0%
!!! TTTTTTAAATTCACGACATT+GGG - tig0026289:64794-64813 Msa1428050:intron 20.0%
!! GTTGTGTAAATGATTTAAAA+AGG - tig0026289:64858-64877 Msa1428050:intron 20.0%
!!! CCTTTATTTTGAATAAATAG+AGG + tig0026289:65079-65098 None:intergenic 20.0%
!! CCTCTATTTATTCAAAATAA+AGG - tig0026289:65076-65095 Msa1428050:intron 20.0%
!!! TTTTGCACAATTAAATAGAA+AGG + tig0026289:65196-65215 None:intergenic 20.0%
!!! TTTTTTAGTTTGCATGTTAT+TGG - tig0026289:65546-65565 Msa1428050:intron 20.0%
!! TTTGTTTGATGAAAACTTTA+AGG - tig0026289:66137-66156 Msa1428050:intron 20.0%
!! AAAAAAGAATAGAAGAGAAA+GGG + tig0026289:66303-66322 None:intergenic 20.0%
!!! TTATAATGATCAAAGAGTAT+TGG - tig0026289:66345-66364 Msa1428050:intron 20.0%
!! TTTCAATTATATATGCATCA+AGG - tig0026289:66704-66723 Msa1428050:CDS 20.0%
!! TTCAATTATATATGCATCAA+GGG - tig0026289:66705-66724 Msa1428050:CDS 20.0%
! ACAGTACAAAATCATCTTAT+AGG - tig0026289:59289-59308 Msa1428050:CDS 25.0%
!! CAACTTTGTTATGATTAAAG+AGG + tig0026289:59459-59478 None:intergenic 25.0%
!! ATAATTTGAGGCTTGTATTT+GGG - tig0026289:59544-59563 Msa1428050:intron 25.0%
!!! AATGTCTATTGTTACTTTCA+AGG - tig0026289:59621-59640 Msa1428050:intron 25.0%
!!! ATGTCTATTGTTACTTTCAA+GGG - tig0026289:59622-59641 Msa1428050:intron 25.0%
! ATTATAGAAAGACAAGTTCA+AGG + tig0026289:59676-59695 None:intergenic 25.0%
! TTTGAGAAGAGTTTATAAAG+AGG - tig0026289:60086-60105 Msa1428050:intron 25.0%
!!! AGAAAAAGTGTTGAAATTTG+AGG + tig0026289:60157-60176 None:intergenic 25.0%
!!! AATTTCAACACTTTTTCTTC+TGG - tig0026289:60159-60178 Msa1428050:intron 25.0%
! AATTTGGATTTACATCTACA+TGG - tig0026289:60199-60218 Msa1428050:intron 25.0%
!! TTCTAAAAACATTGCGTATA+GGG + tig0026289:60294-60313 None:intergenic 25.0%
!! TTTCTAAAAACATTGCGTAT+AGG + tig0026289:60295-60314 None:intergenic 25.0%
! TTAAGAATATAAACCGGAAT+TGG + tig0026289:60367-60386 None:intergenic 25.0%
! TTGGACTTAAGAATATAAAC+CGG + tig0026289:60373-60392 None:intergenic 25.0%
! CTACATATTTCCTTTCTATA+TGG + tig0026289:60433-60452 None:intergenic 25.0%
! ATCAAAACTTGATAAGTTCA+TGG + tig0026289:60489-60508 None:intergenic 25.0%
! ACTTAACTTCACATAATCTT+AGG + tig0026289:60558-60577 None:intergenic 25.0%
! AGATTATGTGAAGTTAAGTA+TGG - tig0026289:60559-60578 Msa1428050:intron 25.0%
!! GTAGAAAGCATGTTAAAAAA+AGG + tig0026289:60586-60605 None:intergenic 25.0%
! GAAAGAAGAATTAAGAAAAG+TGG - tig0026289:60873-60892 Msa1428050:intron 25.0%
! AATCACAAACATAAAGGAAT+AGG + tig0026289:61105-61124 None:intergenic 25.0%
! ATTCCTTTATGTTTGTGATT+TGG - tig0026289:61105-61124 Msa1428050:CDS 25.0%
! TTCCTTTATGTTTGTGATTT+GGG - tig0026289:61106-61125 Msa1428050:CDS 25.0%
!!! TTATATTCATGAGCTTTAGA+TGG - tig0026289:61310-61329 Msa1428050:intron 25.0%
! AAATACCATTTCTAAATGGT+CGG - tig0026289:61399-61418 Msa1428050:CDS 25.0%
! TATGATTTCCGATTCAAATA+AGG - tig0026289:61454-61473 Msa1428050:intron 25.0%
! ACAGTTTACAACTATATGTA+AGG - tig0026289:61665-61684 Msa1428050:intron 25.0%
!! GTTATTGAAGATAAGTTTTG+TGG - tig0026289:61811-61830 Msa1428050:intron 25.0%
!!! AGATAAGTTTTGTGGTTTTA+AGG - tig0026289:61819-61838 Msa1428050:intron 25.0%
! ATAACAAGTGGAATATTTCT+AGG - tig0026289:61896-61915 Msa1428050:intron 25.0%
!!! TCATGATGTTTTATTGTTTC+AGG - tig0026289:61938-61957 Msa1428050:intron 25.0%
! TGAGAGAAATTTAGAAGATA+AGG - tig0026289:62011-62030 Msa1428050:intron 25.0%
! AGTTAAAGTGAAAGATACAA+GGG + tig0026289:62069-62088 None:intergenic 25.0%
! TTCCAAAAAATTTAAGCACA+TGG - tig0026289:62198-62217 Msa1428050:intron 25.0%
!!! GTATGTTTGTCTTTATTTTC+AGG - tig0026289:62468-62487 Msa1428050:intron 25.0%
!!! TTTATTTTCAGGACATCATT+CGG - tig0026289:62479-62498 Msa1428050:CDS 25.0%
! AATTAATGTTGAGGACTTAA+AGG + tig0026289:62551-62570 None:intergenic 25.0%
!! CTTATTGATAGCATAAAAGA+AGG - tig0026289:62656-62675 Msa1428050:intron 25.0%
! AAGAAAAGAGAATATACCTT+GGG + tig0026289:62716-62735 None:intergenic 25.0%
! TAAGAAAAGAGAATATACCT+TGG + tig0026289:62717-62736 None:intergenic 25.0%
! TTATATAGTTCCTCCAAATA+AGG - tig0026289:62913-62932 Msa1428050:intron 25.0%
!! TTATGCTAGTTTATATACAC+CGG + tig0026289:63045-63064 None:intergenic 25.0%
! GTATGAATGTTAGTCATATT+CGG - tig0026289:63190-63209 Msa1428050:intron 25.0%
! AAAAATGTGGATAGAAAACA+AGG + tig0026289:63227-63246 None:intergenic 25.0%
!! TGTTTTCTATCCACATTTTT+TGG - tig0026289:63227-63246 Msa1428050:intron 25.0%
! GTTGAAGCTAATTATCTTTA+CGG - tig0026289:63413-63432 Msa1428050:CDS 25.0%
!!! ATATTAGATTTTAGGAGAAG+GGG + tig0026289:64419-64438 None:intergenic 25.0%
!!! GATATTAGATTTTAGGAGAA+GGG + tig0026289:64420-64439 None:intergenic 25.0%
!!! AGATATTAGATTTTAGGAGA+AGG + tig0026289:64421-64440 None:intergenic 25.0%
! AGATACTAAAGAATGTTGAT+TGG + tig0026289:64649-64668 None:intergenic 25.0%
! GGGAGAAAAAAATTAAAATC+AGG - tig0026289:65097-65116 Msa1428050:intron 25.0%
!! CTGCATGGAAAAATAAATTT+TGG - tig0026289:65497-65516 Msa1428050:CDS 25.0%
!! AAGTTTTCATCAAACAAATC+TGG + tig0026289:66135-66154 None:intergenic 25.0%
! GAAAAAAGAATAGAAGAGAA+AGG + tig0026289:66304-66323 None:intergenic 25.0%
!!! CATAAGCTTTAAGATATCTT+AGG - tig0026289:66654-66673 Msa1428050:CDS 25.0%
ACTTGTTTATAAGAGGTCTT+TGG - tig0026289:58855-58874 Msa1428050:CDS 30.0%
TATGAAAATTGGAATGCACT+CGG - tig0026289:59243-59262 Msa1428050:CDS 30.0%
GTACAAAATCATCTTATAGG+CGG - tig0026289:59292-59311 Msa1428050:CDS 30.0%
TACAAAATCATCTTATAGGC+GGG - tig0026289:59293-59312 Msa1428050:CDS 30.0%
! CTTTGTTATGATTAAAGAGG+TGG + tig0026289:59456-59475 None:intergenic 30.0%
TATTACGTAATGAGCTAATG+AGG + tig0026289:59488-59507 None:intergenic 30.0%
! CATAATTTGAGGCTTGTATT+TGG - tig0026289:59543-59562 Msa1428050:intron 30.0%
! TAATTTGAGGCTTGTATTTG+GGG - tig0026289:59545-59564 Msa1428050:intron 30.0%
! GTTTGAAAGACAAGTTTTTG+AGG + tig0026289:59721-59740 None:intergenic 30.0%
GATCCTATCAATTTATGTGA+TGG - tig0026289:59880-59899 Msa1428050:intron 30.0%
AGACCATCACATAAATTGAT+AGG + tig0026289:59886-59905 None:intergenic 30.0%
! GTAATTGGAATTCTGAAAAG+AGG + tig0026289:59958-59977 None:intergenic 30.0%
! ATCTCTGAAAATGAAACTTG+TGG + tig0026289:60015-60034 None:intergenic 30.0%
AAGAAAATGCTCAAACATCA+AGG + tig0026289:60255-60274 None:intergenic 30.0%
! TTGATGTTTGAGCATTTTCT+TGG - tig0026289:60254-60273 Msa1428050:intron 30.0%
TCAAATTGAGTATCCAATTC+CGG - tig0026289:60351-60370 Msa1428050:intron 30.0%
!! TAAGACAATAAGCATTGGTT+TGG + tig0026289:60392-60411 None:intergenic 30.0%
TTTCATTAGGCCATATAGAA+AGG - tig0026289:60420-60439 Msa1428050:CDS 30.0%
TATCCACAAAAAATCTTCTG+GGG + tig0026289:60514-60533 None:intergenic 30.0%
GTATCCACAAAAAATCTTCT+GGG + tig0026289:60515-60534 None:intergenic 30.0%
TGTATCCACAAAAAATCTTC+TGG + tig0026289:60516-60535 None:intergenic 30.0%
!!! ATTTTTTGTGGATACAGTTC+AGG - tig0026289:60520-60539 Msa1428050:intron 30.0%
! TACCTTAAAGGTGAAGTTTT+TGG + tig0026289:60676-60695 None:intergenic 30.0%
AAATTCCAGATTGTGTTTCA+TGG - tig0026289:60943-60962 Msa1428050:intron 30.0%
TTATACCATGAAACACAATC+TGG + tig0026289:60951-60970 None:intergenic 30.0%
AAGAGGTAATTGTACTTGAT+GGG - tig0026289:60980-60999 Msa1428050:intron 30.0%
ACCTGTAGCAAATCTAAATA+AGG - tig0026289:61059-61078 Msa1428050:intron 30.0%
!! ACCTTATTTAGATTTGCTAC+AGG + tig0026289:61063-61082 None:intergenic 30.0%
ATCCCAAATCACAAACATAA+AGG + tig0026289:61111-61130 None:intergenic 30.0%
! TGTGATTTGGGATAATAAAG+AGG - tig0026289:61118-61137 Msa1428050:CDS 30.0%
TTAACATAAATTGAGAGACG+AGG + tig0026289:61148-61167 None:intergenic 30.0%
AGGTTATGATTTCAGATACA+AGG - tig0026289:61343-61362 Msa1428050:intron 30.0%
TTTCAGATACAAGGTCAAAT+TGG - tig0026289:61352-61371 Msa1428050:intron 30.0%
CCATTTAGAAATGGTATTTG+AGG + tig0026289:61398-61417 None:intergenic 30.0%
CCTCAAATACCATTTCTAAA+TGG - tig0026289:61395-61414 Msa1428050:CDS 30.0%
TATATCCGACCATTTAGAAA+TGG + tig0026289:61407-61426 None:intergenic 30.0%
! TCGCAATACCTTATTTGAAT+CGG + tig0026289:61465-61484 None:intergenic 30.0%
! CCTCATCTTTAAAAGCATAA+AGG + tig0026289:61498-61517 None:intergenic 30.0%
!! CCTTTATGCTTTTAAAGATG+AGG - tig0026289:61495-61514 Msa1428050:intron 30.0%
!! ATGCTTTTAAAGATGAGGAT+TGG - tig0026289:61500-61519 Msa1428050:intron 30.0%
!! TGCTTTTAAAGATGAGGATT+GGG - tig0026289:61501-61520 Msa1428050:intron 30.0%
TTATAGCGAGTATATTCAAG+TGG - tig0026289:61601-61620 Msa1428050:intron 30.0%
TGTAAACTGTATTCTCCTTT+GGG + tig0026289:61655-61674 None:intergenic 30.0%
TTGTAAACTGTATTCTCCTT+TGG + tig0026289:61656-61675 None:intergenic 30.0%
ACTAAATGGAAAGAAACACA+AGG + tig0026289:61742-61761 None:intergenic 30.0%
CAGAATAGCTATGAACTAAA+TGG + tig0026289:61756-61775 None:intergenic 30.0%
!! GTTGGAGTTTTAATAACAAG+TGG - tig0026289:61884-61903 Msa1428050:intron 30.0%
CAGTTAAAGTGAAAGATACA+AGG + tig0026289:62070-62089 None:intergenic 30.0%
CAGTGACATTTGTAATAACA+TGG - tig0026289:62090-62109 Msa1428050:intron 30.0%
!!! AGCCATGTGCTTAAATTTTT+TGG + tig0026289:62203-62222 None:intergenic 30.0%
CTGAATTAGAAGTAACATAG+AGG - tig0026289:62221-62240 Msa1428050:CDS 30.0%
TGTGAAATGTGTACGTTAAT+GGG + tig0026289:62351-62370 None:intergenic 30.0%
TTGTGAAATGTGTACGTTAA+TGG + tig0026289:62352-62371 None:intergenic 30.0%
CATTTCACAATACCTTAAAG+AGG - tig0026289:62362-62381 Msa1428050:intron 30.0%
! TTCTCTTTTCTTAACCACTT+AGG - tig0026289:62724-62743 Msa1428050:intron 30.0%
ACATATTAACAATGGTCCTA+TGG + tig0026289:62755-62774 None:intergenic 30.0%
TATGGAAAACTATCATTTGC+CGG - tig0026289:62839-62858 Msa1428050:CDS 30.0%
AAGAAATTCGATATGATGCA+GGG + tig0026289:62895-62914 None:intergenic 30.0%
TAAGAAATTCGATATGATGC+AGG + tig0026289:62896-62915 None:intergenic 30.0%
! AATAAGTCAACCTTATTTGG+AGG + tig0026289:62926-62945 None:intergenic 30.0%
GAGAATAAGTCAACCTTATT+TGG + tig0026289:62929-62948 None:intergenic 30.0%
ATGGAAGATTCTACAAAGAT+GGG + tig0026289:63495-63514 None:intergenic 30.0%
TATGGAAGATTCTACAAAGA+TGG + tig0026289:63496-63515 None:intergenic 30.0%
! AAACTAGAATTTGTCCGTTT+TGG + tig0026289:63558-63577 None:intergenic 30.0%
! TATATTTTCGTATGCTTTGC+AGG - tig0026289:63577-63596 Msa1428050:intron 30.0%
TTTACACACACAAGATTATC+TGG - tig0026289:63748-63767 Msa1428050:CDS 30.0%
!!! ATTTTTTGGATATGGAGAGA+TGG + tig0026289:63810-63829 None:intergenic 30.0%
GGCTAACTTAAGTTATCATT+AGG + tig0026289:63905-63924 None:intergenic 30.0%
! ATGATAACTTAAGTTAGCCT+TGG - tig0026289:63906-63925 Msa1428050:intron 30.0%
!! GATGCAAAAATAAAAGTGCT+AGG - tig0026289:63947-63966 Msa1428050:CDS 30.0%
!! CAAAAATAAAAGTGCTAGGA+GGG - tig0026289:63951-63970 Msa1428050:CDS 30.0%
ATCTAAACTCCTAGTTTAAG+TGG - tig0026289:64047-64066 Msa1428050:intron 30.0%
TATCTAACATTTGATTACCG+CGG + tig0026289:64332-64351 None:intergenic 30.0%
ATTGTTTCAAGCTAACTGTT+AGG + tig0026289:64389-64408 None:intergenic 30.0%
GAGACAATACTTACTGTTAA+TGG - tig0026289:64512-64531 Msa1428050:intron 30.0%
TTGTAATACGTGAACACAAA+GGG - tig0026289:64538-64557 Msa1428050:intron 30.0%
TGATACATAAGTAGGTATCA+GGG + tig0026289:65049-65068 None:intergenic 30.0%
TGTGCAAAATGCAAAACTTT+AGG - tig0026289:65207-65226 Msa1428050:intron 30.0%
GTGCAAAATGCAAAACTTTA+GGG - tig0026289:65208-65227 Msa1428050:intron 30.0%
!! TTATTTTTCCATGCAGAATG+AGG + tig0026289:65493-65512 None:intergenic 30.0%
AACAGTGTAAGTAGTAAATG+TGG + tig0026289:65525-65544 None:intergenic 30.0%
!! GGTTGATTCTATCTTTTTCT+TGG + tig0026289:65605-65624 None:intergenic 30.0%
AGAAAAAGATAGAATCAACC+CGG - tig0026289:65605-65624 Msa1428050:intron 30.0%
AGCAGAAATTGAGTCTTTAA+AGG - tig0026289:65669-65688 Msa1428050:intron 30.0%
TGCTTGTGCTATGTAAAATT+CGG - tig0026289:65904-65923 Msa1428050:intron 30.0%
! AAGAGTGTATTTGAGTGTTA+TGG - tig0026289:65927-65946 Msa1428050:intron 30.0%
! ACTTTAAGGAACTGAAGAAA+TGG - tig0026289:66151-66170 Msa1428050:intron 30.0%
! CTTTAAGGAACTGAAGAAAT+GGG - tig0026289:66152-66171 Msa1428050:intron 30.0%
ACGTTAAGTGCACAAAATAT+GGG - tig0026289:66178-66197 Msa1428050:intron 30.0%
!! TGATCAAAGAGTATTGGTAA+AGG - tig0026289:66351-66370 Msa1428050:intron 30.0%
!! GATCAAAGAGTATTGGTAAA+GGG - tig0026289:66352-66371 Msa1428050:intron 30.0%
! CATCCAATCATGTTTTGTAT+GGG - tig0026289:66681-66700 Msa1428050:CDS 30.0%
AAACCCATACAAAACATGAT+TGG + tig0026289:66687-66706 None:intergenic 30.0%
GTGATTATTACAATGTCCAA+GGG + tig0026289:66746-66765 None:intergenic 30.0%
TGTGATTATTACAATGTCCA+AGG + tig0026289:66747-66766 None:intergenic 30.0%
TTGGCGTCTTCATGAAATTT+AGG + tig0026289:58652-58671 None:intergenic 35.0%
AACCAAATCTTCAAGCTTGT+TGG + tig0026289:58671-58690 None:intergenic 35.0%
ATGAGTGAGCAGTAGATATT+CGG + tig0026289:58749-58768 None:intergenic 35.0%
TATCTACTGCTCACTCATAA+CGG - tig0026289:58751-58770 Msa1428050:three_prime_UTR 35.0%
CGAATAGAGTAAGATGATGA+AGG + tig0026289:58802-58821 None:intergenic 35.0%
AGTTTATAGTGTTTCTCCTC+TGG - tig0026289:58897-58916 Msa1428050:CDS 35.0%
TAATAAGCTAGTTCAACCAG+AGG + tig0026289:58916-58935 None:intergenic 35.0%
CAAGTTCAAGGATAACGAAA+AGG + tig0026289:59664-59683 None:intergenic 35.0%
!! GAAAGACAAGTTTTTGAGGA+CGG + tig0026289:59717-59736 None:intergenic 35.0%
TTCTACTCTCAGCATATTAG+TGG - tig0026289:59858-59877 Msa1428050:intron 35.0%
CTGCATTATTACGAAGTCTA+CGG - tig0026289:59904-59923 Msa1428050:intron 35.0%
! ACAGGCTTGGTTATAGTAAT+TGG + tig0026289:59973-59992 None:intergenic 35.0%
AATTACTATAACCAAGCCTG+TGG - tig0026289:59972-59991 Msa1428050:intron 35.0%
TCTGAAAATGAAACTTGTGG+AGG + tig0026289:60012-60031 None:intergenic 35.0%
GAGAAGAGTTTATAAAGAGG+AGG - tig0026289:60089-60108 Msa1428050:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG + tig0026289:60133-60152 None:intergenic 35.0%
AAATGCTCAAACATCAAGGT+TGG + tig0026289:60251-60270 None:intergenic 35.0%
!! AAATATGTAGAAGTGCCACA+TGG - tig0026289:60443-60462 Msa1428050:CDS 35.0%
ATCCACAAAAAATCTTCTGG+GGG + tig0026289:60513-60532 None:intergenic 35.0%
CATTTCAAAGGTCTTTGCAA+TGG + tig0026289:60621-60640 None:intergenic 35.0%
! CATTGCAAAGACCTTTGAAA+TGG - tig0026289:60619-60638 Msa1428050:intron 35.0%
TGCCAAAAACTTCACCTTTA+AGG - tig0026289:60671-60690 Msa1428050:intron 35.0%
!! TTCACCTTTAAGGTAGTAAG+TGG - tig0026289:60681-60700 Msa1428050:intron 35.0%
!! AGTTTTGGTCAAGTGGAATA+GGG - tig0026289:60730-60749 Msa1428050:intron 35.0%
AGTCGCATAACCAAATATCT+GGG + tig0026289:60825-60844 None:intergenic 35.0%
TTCCTCTCTTTAACAACTTG+TGG - tig0026289:60849-60868 Msa1428050:intron 35.0%
TGGTATAAAAGCTAGTCAAG+AGG - tig0026289:60963-60982 Msa1428050:intron 35.0%
CAAGAGGTAATTGTACTTGA+TGG - tig0026289:60979-60998 Msa1428050:intron 35.0%
TAGAATCTACAGGTCGATAT+GGG + tig0026289:61187-61206 None:intergenic 35.0%
TTAGAATCTACAGGTCGATA+TGG + tig0026289:61188-61207 None:intergenic 35.0%
GAAATCATAACCTTCAGAAC+AGG + tig0026289:61336-61355 None:intergenic 35.0%
TACAAGGTCAAATTGGATGA+TGG - tig0026289:61359-61378 Msa1428050:intron 35.0%
TTTAAAGATGAGGATTGGGA+AGG - tig0026289:61505-61524 Msa1428050:intron 35.0%
TTAAAGATGAGGATTGGGAA+GGG - tig0026289:61506-61525 Msa1428050:intron 35.0%
! CGTTTCAGATACTATTTCTC+AGG - tig0026289:61541-61560 Msa1428050:intron 35.0%
!! GAGTTTTGTAGAGTTTGGAT+AGG + tig0026289:61632-61651 None:intergenic 35.0%
GTAAACTGTATTCTCCTTTG+GGG + tig0026289:61654-61673 None:intergenic 35.0%
TGTAAGGTAAAACTCCTTCT+TGG - tig0026289:61681-61700 Msa1428050:intron 35.0%
AAGAAACACAAGGAACAATC+AGG + tig0026289:61732-61751 None:intergenic 35.0%
!!! TGTGGTTTTAAGGACTTTGA+AGG - tig0026289:61829-61848 Msa1428050:intron 35.0%
!! TTTTAAGGACTTTGAAGGCT+TGG - tig0026289:61834-61853 Msa1428050:intron 35.0%
AAAGCCTGCAATAAGAAAGT+TGG - tig0026289:61866-61885 Msa1428050:intron 35.0%
AACTCCAACTTTCTTATTGC+AGG + tig0026289:61873-61892 None:intergenic 35.0%
! TTTGGAAAAGATGAAGCATC+TGG - tig0026289:61978-61997 Msa1428050:intron 35.0%
ACTGCAAATCTCTGGTTAAT+AGG - tig0026289:62144-62163 Msa1428050:intron 35.0%
ATTGCTAGATGAACTCAAGT+AGG - tig0026289:62245-62264 Msa1428050:CDS 35.0%
TTGCTAGATGAACTCAAGTA+GGG - tig0026289:62246-62265 Msa1428050:CDS 35.0%
AAGTAGGGAGAATTGGAATT+AGG - tig0026289:62261-62280 Msa1428050:CDS 35.0%
TGAAATGTGTACGTTAATGG+GGG + tig0026289:62349-62368 None:intergenic 35.0%
GTGAAATGTGTACGTTAATG+GGG + tig0026289:62350-62369 None:intergenic 35.0%
AAGTCCTCAACATTAATTCC+AGG - tig0026289:62553-62572 Msa1428050:CDS 35.0%
AGTCCTCAACATTAATTCCA+GGG - tig0026289:62554-62573 Msa1428050:CDS 35.0%
! AAACCTTTAAGAGGTAGCTA+GGG + tig0026289:62599-62618 None:intergenic 35.0%
! TAAACCTTTAAGAGGTAGCT+AGG + tig0026289:62600-62619 None:intergenic 35.0%
CAAATGTCAGCACTATAACA+AGG + tig0026289:62636-62655 None:intergenic 35.0%
TTGGTCGGATCAATATCATA+TGG - tig0026289:62821-62840 Msa1428050:intron 35.0%
TTCTGAACGTTTAGAAGAAG+AGG - tig0026289:63168-63187 Msa1428050:intron 35.0%
!!! TCTATCCACATTTTTTGGCA+TGG - tig0026289:63232-63251 Msa1428050:intron 35.0%
GTACATGACCAATAACAACA+AGG - tig0026289:63366-63385 Msa1428050:intron 35.0%
! AGAAAAGTACAACAACAGCA+CGG + tig0026289:63606-63625 None:intergenic 35.0%
TCTTGTGTGTGTAAACTGTT+TGG + tig0026289:63743-63762 None:intergenic 35.0%
ATTATCTGGTGTCTTTGTAG+AGG - tig0026289:63762-63781 Msa1428050:CDS 35.0%
TTATCTGGTGTCTTTGTAGA+GGG - tig0026289:63763-63782 Msa1428050:CDS 35.0%
!! GCAAAAATAAAAGTGCTAGG+AGG - tig0026289:63950-63969 Msa1428050:CDS 35.0%
GTGATGAAGATCTCTTAGAA+TGG - tig0026289:63987-64006 Msa1428050:CDS 35.0%
GTGAGTTAACCACTTAAACT+AGG + tig0026289:64059-64078 None:intergenic 35.0%
AAGAGTCCTGAAACAAATGA+CGG + tig0026289:64081-64100 None:intergenic 35.0%
CTGTTATGTTACCTTGTAGT+CGG - tig0026289:64207-64226 Msa1428050:CDS 35.0%
TCCAAAATCTTTGCAAGCAA+CGG + tig0026289:64250-64269 None:intergenic 35.0%
! TTGCTTGCAAAGATTTTGGA+AGG - tig0026289:64250-64269 Msa1428050:intron 35.0%
ATGTACCTCTTCATGATGAT+GGG + tig0026289:64308-64327 None:intergenic 35.0%
TATGTACCTCTTCATGATGA+TGG + tig0026289:64309-64328 None:intergenic 35.0%
AGGAAAGAAAACTAGAGACT+GGG + tig0026289:64369-64388 None:intergenic 35.0%
TAGGAAAGAAAACTAGAGAC+TGG + tig0026289:64370-64389 None:intergenic 35.0%
CTTGTAATACGTGAACACAA+AGG - tig0026289:64537-64556 Msa1428050:intron 35.0%
AATTACATAATTGCACGGCT+AGG + tig0026289:64734-64753 None:intergenic 35.0%
CAATTACGAATATGCATTGC+AGG - tig0026289:64893-64912 Msa1428050:CDS 35.0%
GGTAATTAATGCAGCAAATG+AGG - tig0026289:64914-64933 Msa1428050:CDS 35.0%
! TTTTGCACTGAAAAGTGATC+TGG - tig0026289:64974-64993 Msa1428050:intron 35.0%
GTGATACATAAGTAGGTATC+AGG + tig0026289:65050-65069 None:intergenic 35.0%
GACTACAGTGATACATAAGT+AGG + tig0026289:65057-65076 None:intergenic 35.0%
CCTAATCCATATAGTTGACA+CGG - tig0026289:65271-65290 Msa1428050:intron 35.0%
GAAAAAGATAGAATCAACCC+GGG - tig0026289:65606-65625 Msa1428050:intron 35.0%
CAGGGATATTGTCTAAATTC+TGG + tig0026289:65757-65776 None:intergenic 35.0%
GTAGCACTTCTTTATGTCTA+TGG + tig0026289:65823-65842 None:intergenic 35.0%
! GAATTTTACATAGCACAAGC+AGG + tig0026289:65905-65924 None:intergenic 35.0%
!! CTTGACTTGTACATTGTCAA+AGG - tig0026289:66032-66051 Msa1428050:intron 35.0%
GACGTTAAGTGCACAAAATA+TGG - tig0026289:66177-66196 Msa1428050:intron 35.0%
TCATATAGTTTCTTCTTCGC+AGG + tig0026289:66473-66492 None:intergenic 35.0%
AGATGGAAAACCCTAGAAAA+GGG + tig0026289:66588-66607 None:intergenic 35.0%
CCATACAAAACATGATTGGA+TGG + tig0026289:66683-66702 None:intergenic 35.0%
! CCATCCAATCATGTTTTGTA+TGG - tig0026289:66680-66699 Msa1428050:CDS 35.0%
TTATTACAATGTCCAAGGGA+TGG + tig0026289:66742-66761 None:intergenic 35.0%
TGAGTGAGCAGTAGATATTC+GGG + tig0026289:58748-58767 None:intergenic 40.0%
!! TAGGCGGGTGACTTTTAAAA+TGG - tig0026289:59308-59327 Msa1428050:CDS 40.0%
! CGAGTTTCTAGACTACAGAT+GGG + tig0026289:59581-59600 None:intergenic 40.0%
! TCGAGTTTCTAGACTACAGA+TGG + tig0026289:59582-59601 None:intergenic 40.0%
TTGATTGACTAATGCACACC+TGG + tig0026289:60048-60067 None:intergenic 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - tig0026289:60131-60150 Msa1428050:intron 40.0%
TTTCTTCTGGTAGCACACTA+AGG - tig0026289:60172-60191 Msa1428050:intron 40.0%
!!! TACCCCCAGAAGATTTTTTG+TGG - tig0026289:60508-60527 Msa1428050:intron 40.0%
GTCTTTGCAATGGACATATC+TGG + tig0026289:60611-60630 None:intergenic 40.0%
!! TGCAAAGACCTTTGAAATGG+CGG - tig0026289:60622-60641 Msa1428050:intron 40.0%
ATAACACTCCGCCATTTCAA+AGG + tig0026289:60633-60652 None:intergenic 40.0%
CTGACCACTTACTACCTTAA+AGG + tig0026289:60688-60707 None:intergenic 40.0%
! AGCTAGTCATAGCTCAGTTT+TGG - tig0026289:60715-60734 Msa1428050:intron 40.0%
!! ATAGCTCAGTTTTGGTCAAG+TGG - tig0026289:60723-60742 Msa1428050:intron 40.0%
!! CAGTTTTGGTCAAGTGGAAT+AGG - tig0026289:60729-60748 Msa1428050:intron 40.0%
GACTACGAATGTGGATCTTA+AGG - tig0026289:60761-60780 Msa1428050:intron 40.0%
CATAACCAAATATCTGGGAG+GGG + tig0026289:60820-60839 None:intergenic 40.0%
GCATAACCAAATATCTGGGA+GGG + tig0026289:60821-60840 None:intergenic 40.0%
GAGTCGCATAACCAAATATC+TGG + tig0026289:60826-60845 None:intergenic 40.0%
CACCACAAGTTGTTAAAGAG+AGG + tig0026289:60854-60873 None:intergenic 40.0%
TGCTACAGGTGTAAGTTTCT+CGG + tig0026289:61049-61068 None:intergenic 40.0%
!! TTGGGGAGTTTTGTAGAGTT+TGG + tig0026289:61637-61656 None:intergenic 40.0%
AACTCTACAAAACTCCCCAA+AGG - tig0026289:61637-61656 Msa1428050:intron 40.0%
! GCATGAAGACTTGCAGATTT+TGG - tig0026289:61960-61979 Msa1428050:intron 40.0%
ACCAGAGATTTGCAGTTTGA+GGG + tig0026289:62140-62159 None:intergenic 40.0%
AACCAGAGATTTGCAGTTTG+AGG + tig0026289:62141-62160 None:intergenic 40.0%
TGAACTCAAGTAGGGAGAAT+TGG - tig0026289:62254-62273 Msa1428050:CDS 40.0%
!! AGCTTTTTCTCTAAGCCAGA+TGG - tig0026289:62505-62524 Msa1428050:CDS 40.0%
AGGAACCATTTCCCATCAAT+GGG + tig0026289:62531-62550 None:intergenic 40.0%
AAGGAACCATTTCCCATCAA+TGG + tig0026289:62532-62551 None:intergenic 40.0%
GTACCCTGGAATTAATGTTG+AGG + tig0026289:62560-62579 None:intergenic 40.0%
AACCACTTAGGCATTTCCAT+AGG - tig0026289:62736-62755 Msa1428050:intron 40.0%
AAAACTATCATTTGCCGGAC+AGG - tig0026289:62844-62863 Msa1428050:CDS 40.0%
AAACTATCATTTGCCGGACA+GGG - tig0026289:62845-62864 Msa1428050:CDS 40.0%
AGCATACAAGATCTTCAAGC+GGG + tig0026289:62967-62986 None:intergenic 40.0%
GAGCATACAAGATCTTCAAG+CGG + tig0026289:62968-62987 None:intergenic 40.0%
GTGTGTGAGATTGTGGAAAT+TGG + tig0026289:62990-63009 None:intergenic 40.0%
CTCGTCAATCTTCAAACACA+AGG + tig0026289:63110-63129 None:intergenic 40.0%
CTTGTGTTTGAAGATTGACG+AGG - tig0026289:63108-63127 Msa1428050:intron 40.0%
TTGAAGATTGACGAGGACAA+AGG - tig0026289:63115-63134 Msa1428050:intron 40.0%
ACGTTCAGAAACAGTCTTCT+TGG + tig0026289:63158-63177 None:intergenic 40.0%
TTCAGCCATGCCAAAAAATG+TGG + tig0026289:63240-63259 None:intergenic 40.0%
!! TGTGCAGTCCTTGTTGTTAT+TGG + tig0026289:63377-63396 None:intergenic 40.0%
ATAACAACAAGGACTGCACA+TGG - tig0026289:63377-63396 Msa1428050:CDS 40.0%
AACTCACCGTCATTTGTTTC+AGG - tig0026289:64072-64091 Msa1428050:intron 40.0%
CTTTGGATATTCCGACTACA+AGG + tig0026289:64221-64240 None:intergenic 40.0%
! TCCGTTGCTTGCAAAGATTT+TGG - tig0026289:64246-64265 Msa1428050:intron 40.0%
!! TGCAAAGATTTTGGAAGGCT+TGG - tig0026289:64255-64274 Msa1428050:intron 40.0%
!! TTTTGGAAGGCTTGGTTTCT+AGG - tig0026289:64263-64282 Msa1428050:intron 40.0%
CAAATCCCATCATCATGAAG+AGG - tig0026289:64300-64319 Msa1428050:intron 40.0%
AGAAAACTAGAGACTGGGAA+AGG + tig0026289:64364-64383 None:intergenic 40.0%
TAATACGTGAACACAAAGGG+TGG - tig0026289:64541-64560 Msa1428050:intron 40.0%
AATACGTGAACACAAAGGGT+GGG - tig0026289:64542-64561 Msa1428050:intron 40.0%
!! CAGTATTGATAGAGAAGAGC+TGG - tig0026289:64944-64963 Msa1428050:CDS 40.0%
GAAAAGTGATCTGGATGATG+AGG - tig0026289:64983-65002 Msa1428050:intron 40.0%
TCCATGCAGTGAAATCTCAA+TGG - tig0026289:65145-65164 Msa1428050:intron 40.0%
ACCATTGAGATTTCACTGCA+TGG + tig0026289:65149-65168 None:intergenic 40.0%
CCGTGTCAACTATATGGATT+AGG + tig0026289:65274-65293 None:intergenic 40.0%
CAATTGCCGTGTCAACTATA+TGG + tig0026289:65280-65299 None:intergenic 40.0%
TTATGGAACCTCATTCTGCA+TGG - tig0026289:65482-65501 Msa1428050:CDS 40.0%
! TATGGTTTGAGTTCAAGCGA+GGG + tig0026289:65805-65824 None:intergenic 40.0%
GACTTGTACATTGTCAAAGG+AGG - tig0026289:66035-66054 Msa1428050:intron 40.0%
ATCATCCTTTGATTGCTCGT+CGG + tig0026289:66103-66122 None:intergenic 40.0%
CACAAAATATGGGATCCTGT+TGG - tig0026289:66188-66207 Msa1428050:intron 40.0%
! AGAAGCGTAGTCAAAGGATT+GGG - tig0026289:66220-66239 Msa1428050:intron 40.0%
CCAGTTGAAAAACAAGGTTC+TGG + tig0026289:66411-66430 None:intergenic 40.0%
!!! CCAGAACCTTGTTTTTCAAC+TGG - tig0026289:66408-66427 Msa1428050:intron 40.0%
CTGCATCCAGTTGAAAAACA+AGG + tig0026289:66417-66436 None:intergenic 40.0%
!! CTTGTTTTTCAACTGGATGC+AGG - tig0026289:66415-66434 Msa1428050:intron 40.0%
CTCTCTTTGCTTGAAGAAGT+TGG - tig0026289:66500-66519 Msa1428050:intron 40.0%
CTTTGCTTGAAGAAGTTGGA+TGG - tig0026289:66504-66523 Msa1428050:intron 40.0%
TAGCTACATATGAGAGACAG+TGG - tig0026289:66534-66553 Msa1428050:intron 40.0%
GATGGAAAACCCTAGAAAAG+GGG + tig0026289:66587-66606 None:intergenic 40.0%
CAGATGGAAAACCCTAGAAA+AGG + tig0026289:66589-66608 None:intergenic 40.0%
AAAGCTTATGCTGATGCAAC+TGG + tig0026289:66644-66663 None:intergenic 40.0%
AATGTCCAAGGGATGGTAAA+TGG + tig0026289:66735-66754 None:intergenic 40.0%
CGCCAACAAGCTTGAAGATT+TGG - tig0026289:58666-58685 Msa1428050:three_prime_UTR 45.0%
!! GTATTGACTGCAAAGCACCA+TGG - tig0026289:59926-59945 Msa1428050:intron 45.0%
TTGTGGAGGTCTGTTGATCA+CGG + tig0026289:59998-60017 None:intergenic 45.0%
TCAGAGATGTTATTCGAGCC+AGG - tig0026289:60027-60046 Msa1428050:intron 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + tig0026289:60124-60143 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - tig0026289:60121-60140 Msa1428050:intron 45.0%
AGCACACTAAGGCTGGAATT+TGG - tig0026289:60183-60202 Msa1428050:intron 45.0%
!!! AGGTGAAGTTTTTGGCAGCA+GGG + tig0026289:60668-60687 None:intergenic 45.0%
!!! AAGGTGAAGTTTTTGGCAGC+AGG + tig0026289:60669-60688 None:intergenic 45.0%
GGTAGTAAGTGGTCAGACAT+TGG - tig0026289:60692-60711 Msa1428050:intron 45.0%
GAGTCATGAGACTACGAATG+TGG - tig0026289:60752-60771 Msa1428050:intron 45.0%
ATTCTCCCCTCCCAGATATT+TGG - tig0026289:60812-60831 Msa1428050:intron 45.0%
CGCATAACCAAATATCTGGG+AGG + tig0026289:60822-60841 None:intergenic 45.0%
!! AGTTGATGCAGAAGCACTAC+TGG - tig0026289:61020-61039 Msa1428050:intron 45.0%
! GCGCTGATCTTAGAATCTAC+AGG + tig0026289:61197-61216 None:intergenic 45.0%
CTTTAGATGGCCTGTTCTGA+AGG - tig0026289:61323-61342 Msa1428050:intron 45.0%
AAGGAACAATCAGGCATGTG+TGG + tig0026289:61723-61742 None:intergenic 45.0%
TCCCTCAAACTGCAAATCTC+TGG - tig0026289:62136-62155 Msa1428050:intron 45.0%
TTAATTCCAGGGTACGTTGC+TGG - tig0026289:62565-62584 Msa1428050:CDS 45.0%
TAATTCCAGGGTACGTTGCT+GGG - tig0026289:62566-62585 Msa1428050:CDS 45.0%
AGTCCCTAGCTACCTCTTAA+AGG - tig0026289:62593-62612 Msa1428050:intron 45.0%
! TTGGGAAGCTTGTCTTTTGG+TGG + tig0026289:62698-62717 None:intergenic 45.0%
ACCAAAAGACAAGCTTCCCA+AGG - tig0026289:62697-62716 Msa1428050:CDS 45.0%
! ACCTTGGGAAGCTTGTCTTT+TGG + tig0026289:62701-62720 None:intergenic 45.0%
GTCCTATGGAAATGCCTAAG+TGG + tig0026289:62741-62760 None:intergenic 45.0%
TTTCCACAGAACTCTCTGCA+AGG - tig0026289:62791-62810 Msa1428050:intron 45.0%
CTCTCTGCAAGGATCTGTAT+TGG - tig0026289:62802-62821 Msa1428050:intron 45.0%
! CTGCAAGGATCTGTATTGGT+CGG - tig0026289:62806-62825 Msa1428050:intron 45.0%
AACTATCATTTGCCGGACAG+GGG - tig0026289:62846-62865 Msa1428050:CDS 45.0%
TTCAAGCGGGTAAGTGCATA+AGG + tig0026289:62954-62973 None:intergenic 45.0%
!! TTAGCCTTGGCTTGTCTACT+AGG - tig0026289:63919-63938 Msa1428050:intron 45.0%
CAAGTTGTCTGTCTTGCTCA+AGG - tig0026289:64012-64031 Msa1428050:CDS 45.0%
! TCATGAAGAGGTACATACCG+CGG - tig0026289:64312-64331 Msa1428050:intron 45.0%
AAACTAGAGACTGGGAAAGG+AGG + tig0026289:64361-64380 None:intergenic 45.0%
ATACGTGAACACAAAGGGTG+GGG - tig0026289:64543-64562 Msa1428050:intron 45.0%
AATTGCACGGCTAGGAAGAT+AGG + tig0026289:64726-64745 None:intergenic 45.0%
!! TATCCCTGTACTGACTACTG+CGG - tig0026289:65769-65788 Msa1428050:intron 45.0%
! ATGGTTTGAGTTCAAGCGAG+GGG + tig0026289:65804-65823 None:intergenic 45.0%
! CTATGGTTTGAGTTCAAGCG+AGG + tig0026289:65806-65825 None:intergenic 45.0%
! GCTACTCTTCTTTGAGAGCT+TGG - tig0026289:65838-65857 Msa1428050:intron 45.0%
AAAGGAGGTAGATAACTCCC+CGG - tig0026289:66050-66069 Msa1428050:intron 45.0%
AAATCCCGACGAGCAATCAA+AGG - tig0026289:66095-66114 Msa1428050:intron 45.0%
TCATCCTTTGATTGCTCGTC+GGG + tig0026289:66102-66121 None:intergenic 45.0%
GACGAGCAATCAAAGGATGA+TGG - tig0026289:66102-66121 Msa1428050:intron 45.0%
! GAGAAGCGTAGTCAAAGGAT+TGG - tig0026289:66219-66238 Msa1428050:intron 45.0%
! AAGGATTGGGACAGCATTGA+AGG - tig0026289:66233-66252 Msa1428050:intron 45.0%
GAAAACCCTAGAAAAGGGGT+AGG + tig0026289:66583-66602 None:intergenic 45.0%
! GGGTTTTCCATCTGTGAAAC+AGG - tig0026289:66595-66614 Msa1428050:intron 45.0%
ACAGCAACCTGTTTCACAGA+TGG + tig0026289:66605-66624 None:intergenic 45.0%
ATCTGTGAAACAGGTTGCTG+TGG - tig0026289:66604-66623 Msa1428050:intron 45.0%
TGAAACAGGTTGCTGTGGAA+TGG - tig0026289:66609-66628 Msa1428050:intron 45.0%
TTATGCTGATGCAACTGGCA+AGG + tig0026289:66639-66658 None:intergenic 45.0%
! GATTGCCATTTACCATCCCT+TGG - tig0026289:66727-66746 Msa1428050:CDS 45.0%
!!! TAATTTAAAATAAAATATGT+AGG + tig0026289:59099-59118 None:intergenic 5.0%
!! TAATTAAATAAATATATAGA+AGG + tig0026289:62442-62461 None:intergenic 5.0%
!! AGTTTTTGAGGACGGCGATG+TGG + tig0026289:59709-59728 None:intergenic 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG + tig0026289:60119-60138 None:intergenic 50.0%
TTCTGGTAGCACACTAAGGC+TGG - tig0026289:60176-60195 Msa1428050:intron 50.0%
AAGTGCCACATGGTGCATCT+TGG - tig0026289:60453-60472 Msa1428050:CDS 50.0%
AGTGCCACATGGTGCATCTT+GGG - tig0026289:60454-60473 Msa1428050:CDS 50.0%
TCAACCCAAGATGCACCATG+TGG + tig0026289:60461-60480 None:intergenic 50.0%
!!! GGTGAAGTTTTTGGCAGCAG+GGG + tig0026289:60667-60686 None:intergenic 50.0%
GCTTCTGCATCAACTCTGAC+AGG + tig0026289:61015-61034 None:intergenic 50.0%
CTAGCATCTGCTTTCCAGAG+GGG + tig0026289:61244-61263 None:intergenic 50.0%
GCTAGCATCTGCTTTCCAGA+GGG + tig0026289:61245-61264 None:intergenic 50.0%
TGCTAGCATCTGCTTTCCAG+AGG + tig0026289:61246-61265 None:intergenic 50.0%
CTCCTTCTTGGAACGTCTAC+TGG - tig0026289:61693-61712 Msa1428050:intron 50.0%
GTCCAGTAGACGTTCCAAGA+AGG + tig0026289:61698-61717 None:intergenic 50.0%
TAAGCCAGATGGCCCATTGA+TGG - tig0026289:62516-62535 Msa1428050:CDS 50.0%
AAGCCAGATGGCCCATTGAT+GGG - tig0026289:62517-62536 Msa1428050:CDS 50.0%
TTTCCCATCAATGGGCCATC+TGG + tig0026289:62523-62542 None:intergenic 50.0%
GATGGCCCATTGATGGGAAA+TGG - tig0026289:62523-62542 Msa1428050:CDS 50.0%
! GGAAGCTTGTCTTTTGGTGG+TGG + tig0026289:62695-62714 None:intergenic 50.0%
GATCCTTGCAGAGAGTTCTG+TGG + tig0026289:62797-62816 None:intergenic 50.0%
ACTATCATTTGCCGGACAGG+GGG - tig0026289:62847-62866 Msa1428050:CDS 50.0%
! GTTTTTATGCTCCCCCTGTC+CGG + tig0026289:62861-62880 None:intergenic 50.0%
! ATGATGCAGGGTGCTTCTCT+GGG + tig0026289:62883-62902 None:intergenic 50.0%
! TATGATGCAGGGTGCTTCTC+TGG + tig0026289:62884-62903 None:intergenic 50.0%
AACACGCGTGTGTGAGATTG+TGG + tig0026289:62997-63016 None:intergenic 50.0%
ACAATCTCACACACGCGTGT+TGG - tig0026289:62996-63015 Msa1428050:intron 50.0%
ACCTTGGCTGTCATGATGAG+TGG - tig0026289:63692-63711 Msa1428050:intron 50.0%
TCCACTCATCATGACAGCCA+AGG + tig0026289:63696-63715 None:intergenic 50.0%
GCAAGCAACGGAGTGTACTT+TGG + tig0026289:64238-64257 None:intergenic 50.0%
! TCTGGATGATGAGGAAGCAC+AGG - tig0026289:64992-65011 Msa1428050:intron 50.0%
! GGTAAAGTGCCTCTGCTAAC+TGG + tig0026289:65633-65652 None:intergenic 50.0%
!! AGCAGAGGCACTTTACCAGA+AGG - tig0026289:65636-65655 Msa1428050:intron 50.0%
!! GCAGAGGCACTTTACCAGAA+GGG - tig0026289:65637-65656 Msa1428050:intron 50.0%
!! CAGAGGCACTTTACCAGAAG+GGG - tig0026289:65638-65657 Msa1428050:intron 50.0%
TTGCCGCAGTAGTCAGTACA+GGG + tig0026289:65775-65794 None:intergenic 50.0%
ATTGCCGCAGTAGTCAGTAC+AGG + tig0026289:65776-65795 None:intergenic 50.0%
! CACACGAGAAGCGTAGTCAA+AGG - tig0026289:66214-66233 Msa1428050:intron 50.0%
TAGAAAAGGGGTAGGCTAGG+GGG + tig0026289:66575-66594 None:intergenic 50.0%
CTAGAAAAGGGGTAGGCTAG+GGG + tig0026289:66576-66595 None:intergenic 50.0%
CCTAGAAAAGGGGTAGGCTA+GGG + tig0026289:66577-66596 None:intergenic 50.0%
! CCTAGCCTACCCCTTTTCTA+GGG - tig0026289:66575-66594 Msa1428050:intron 50.0%
TTTGAGGACGGCGATGTGGA+AGG + tig0026289:59705-59724 None:intergenic 55.0%
CTGAAAAGAGGACCACGCCA+TGG + tig0026289:59946-59965 None:intergenic 55.0%
GCACTCCTCACCTTACAAGC+CGG - tig0026289:60111-60130 Msa1428050:intron 55.0%
!!! GAAGTTTTTGGCAGCAGGGG+AGG + tig0026289:60664-60683 None:intergenic 55.0%
GATCGTGACAAACTCCCCTC+TGG - tig0026289:61227-61246 Msa1428050:intron 55.0%
TGTAACCCAGCAACGTACCC+TGG + tig0026289:62574-62593 None:intergenic 55.0%
CGCACCTAGTAGACAAGCCA+AGG + tig0026289:63926-63945 None:intergenic 55.0%
TTCTGTTGTAGCTGCAGCCG+GGG + tig0026289:66070-66089 None:intergenic 55.0%
CTTCTGTTGTAGCTGCAGCC+GGG + tig0026289:66071-66090 None:intergenic 55.0%
CCTTCTGTTGTAGCTGCAGC+CGG + tig0026289:66072-66091 None:intergenic 55.0%
GCTTCTCGTGTGTCACCAAC+AGG + tig0026289:66206-66225 None:intergenic 55.0%
! CCCTAGCCTACCCCTTTTCT+AGG - tig0026289:66574-66593 Msa1428050:intron 55.0%
CCCTAGAAAAGGGGTAGGCT+AGG + tig0026289:66578-66597 None:intergenic 55.0%
! GACTGCAAAGCACCATGGCG+TGG - tig0026289:59931-59950 Msa1428050:intron 60.0%
GTTGATCACGGCCACAGGCT+TGG + tig0026289:59986-60005 None:intergenic 60.0%
GGTCTGTTGATCACGGCCAC+AGG + tig0026289:59991-60010 None:intergenic 60.0%
CACACGCACTCAAGCTGCAC+CGG - tig0026289:63023-63042 Msa1428050:intron 60.0%
AACCCGGGACCAGTTAGCAG+AGG - tig0026289:65621-65640 Msa1428050:intron 60.0%
TGCCTCTGCTAACTGGTCCC+GGG + tig0026289:65626-65645 None:intergenic 60.0%
GTGCCTCTGCTAACTGGTCC+CGG + tig0026289:65627-65646 None:intergenic 60.0%
CTGCTAGTGCAAGCCCCTTC+TGG + tig0026289:65654-65673 None:intergenic 60.0%
CCGGCTGCAGCTACAACAGA+AGG - tig0026289:66069-66088 Msa1428050:intron 60.0%
Chromosome Type Strat End Strand Name
tig0026289 gene 58631 66772 58631 ID=Msa1428050;Name=Msa1428050
tig0026289 mRNA 58631 66772 58631 ID=Msa1428050-mRNA-1;Parent=Msa1428050;Name=Msa1428050-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.94|0.89|1|0.88|0.89|19|177|701
tig0026289 exon 58631 58966 58631 ID=Msa1428050-mRNA-1:exon:5766;Parent=Msa1428050-mRNA-1
tig0026289 exon 59149 59349 59149 ID=Msa1428050-mRNA-1:exon:5765;Parent=Msa1428050-mRNA-1
tig0026289 exon 59713 59805 59713 ID=Msa1428050-mRNA-1:exon:5764;Parent=Msa1428050-mRNA-1
tig0026289 exon 60390 60488 60390 ID=Msa1428050-mRNA-1:exon:5763;Parent=Msa1428050-mRNA-1
tig0026289 exon 61082 61177 61082 ID=Msa1428050-mRNA-1:exon:5762;Parent=Msa1428050-mRNA-1
tig0026289 exon 61370 61462 61370 ID=Msa1428050-mRNA-1:exon:5761;Parent=Msa1428050-mRNA-1
tig0026289 exon 62214 62282 62214 ID=Msa1428050-mRNA-1:exon:5760;Parent=Msa1428050-mRNA-1
tig0026289 exon 62469 62603 62469 ID=Msa1428050-mRNA-1:exon:5759;Parent=Msa1428050-mRNA-1
tig0026289 exon 62685 62736 62685 ID=Msa1428050-mRNA-1:exon:5758;Parent=Msa1428050-mRNA-1
tig0026289 exon 62828 62913 62828 ID=Msa1428050-mRNA-1:exon:5757;Parent=Msa1428050-mRNA-1
tig0026289 exon 63371 63443 63371 ID=Msa1428050-mRNA-1:exon:5756;Parent=Msa1428050-mRNA-1
tig0026289 exon 63717 63796 63717 ID=Msa1428050-mRNA-1:exon:5755;Parent=Msa1428050-mRNA-1
tig0026289 exon 63928 64045 63928 ID=Msa1428050-mRNA-1:exon:5754;Parent=Msa1428050-mRNA-1
tig0026289 exon 64127 64227 64127 ID=Msa1428050-mRNA-1:exon:5753;Parent=Msa1428050-mRNA-1
tig0026289 exon 64323 64451 64323 ID=Msa1428050-mRNA-1:exon:5752;Parent=Msa1428050-mRNA-1
tig0026289 exon 64621 64791 64621 ID=Msa1428050-mRNA-1:exon:5751;Parent=Msa1428050-mRNA-1
tig0026289 exon 64862 64974 64862 ID=Msa1428050-mRNA-1:exon:5750;Parent=Msa1428050-mRNA-1
tig0026289 exon 65451 65533 65451 ID=Msa1428050-mRNA-1:exon:5749;Parent=Msa1428050-mRNA-1
tig0026289 exon 66618 66772 66618 ID=Msa1428050-mRNA-1:exon:5748;Parent=Msa1428050-mRNA-1
tig0026289 CDS 66618 66772 66618 ID=Msa1428050-mRNA-1:cds;Parent=Msa1428050-mRNA-1
tig0026289 CDS 65451 65533 65451 ID=Msa1428050-mRNA-1:cds;Parent=Msa1428050-mRNA-1
tig0026289 CDS 64862 64974 64862 ID=Msa1428050-mRNA-1:cds;Parent=Msa1428050-mRNA-1
tig0026289 CDS 64621 64791 64621 ID=Msa1428050-mRNA-1:cds;Parent=Msa1428050-mRNA-1
tig0026289 CDS 64323 64451 64323 ID=Msa1428050-mRNA-1:cds;Parent=Msa1428050-mRNA-1
tig0026289 CDS 64127 64227 64127 ID=Msa1428050-mRNA-1:cds;Parent=Msa1428050-mRNA-1
tig0026289 CDS 63928 64045 63928 ID=Msa1428050-mRNA-1:cds;Parent=Msa1428050-mRNA-1
tig0026289 CDS 63717 63796 63717 ID=Msa1428050-mRNA-1:cds;Parent=Msa1428050-mRNA-1
tig0026289 CDS 63371 63443 63371 ID=Msa1428050-mRNA-1:cds;Parent=Msa1428050-mRNA-1
tig0026289 CDS 62828 62913 62828 ID=Msa1428050-mRNA-1:cds;Parent=Msa1428050-mRNA-1
tig0026289 CDS 62685 62736 62685 ID=Msa1428050-mRNA-1:cds;Parent=Msa1428050-mRNA-1
tig0026289 CDS 62469 62603 62469 ID=Msa1428050-mRNA-1:cds;Parent=Msa1428050-mRNA-1
tig0026289 CDS 62214 62282 62214 ID=Msa1428050-mRNA-1:cds;Parent=Msa1428050-mRNA-1
tig0026289 CDS 61370 61462 61370 ID=Msa1428050-mRNA-1:cds;Parent=Msa1428050-mRNA-1
tig0026289 CDS 61082 61177 61082 ID=Msa1428050-mRNA-1:cds;Parent=Msa1428050-mRNA-1
tig0026289 CDS 60390 60488 60390 ID=Msa1428050-mRNA-1:cds;Parent=Msa1428050-mRNA-1
tig0026289 CDS 59713 59805 59713 ID=Msa1428050-mRNA-1:cds;Parent=Msa1428050-mRNA-1
tig0026289 CDS 59149 59349 59149 ID=Msa1428050-mRNA-1:cds;Parent=Msa1428050-mRNA-1
tig0026289 CDS 58808 58966 58808 ID=Msa1428050-mRNA-1:cds;Parent=Msa1428050-mRNA-1
tig0026289 three_prime_UTR 58631 58807 58631 ID=Msa1428050-mRNA-1:three_prime_utr;Parent=Msa1428050-mRNA-1
Gene Sequence

>Msa1428050

TGGACTGTGAAAGTTGATCCTAAATTTCATGAAGACGCCAACAAGCTTGAAGATTTGGTTGTATTTGAAGAGTGCATTGAGTTGCACTCTTCAGATAGCACAGTTGTGAAAGCTCCCGAATATCTACTGCTCACTCATAACGGTCGCACATTCAACATATTAGTGGATCCTATCAATTTATGTGATGGTCTGCATTATTACGAAGTCTACGGTATTGACTGCAAAGCACCATGGCGTGGCCATATAGAAAGGAAATATGTAGAAGTGCCACATGGTGCATCTTGGGTTGAAGCAACCATGAACTTATCAAGTTTTGATACCCCCAGAAGATTTTTTGTGGATACAGTTCAGATATGTCCATTGCAAAGACCTTTGAAATGGCGGAGTGTTATAACTTTTTCCTCCCCTGCTGCCAAAAACTTCACCTTTAAGGTAGTAAGTGGTCAGACATTGGAGCTAGTCATAGCTCAGTTTTGGTCAAGTGGAATAGGGAGTCATGAGACTACGAATGTGGATCTTAAGATTGTGTTTCATGGTATAAAAGCTAGTCAAGAGGTAATTGTACTTGATGGGAGTGAAGCACCTGTCAGAGTTGATGCAGAAGCACTACTGGCATCCGAGAAACTTACACCTGTAGCAAATCTAAATAAGATAAGAGTCCCATATCGACCTGTAGATTCTAAGATCAGCGCACTTTCAAATGATCGTGACAAACTCCCCTCTGGAAAGCAGATGCTAGCACTGACATTAACATACAAGGTCAAATTGGATGATGGAGCTGAAATAAAACCTCAAATACCATTTCTAAATGGTCGGATATATGACACTAAGTTTGAGTCTCAGTTTTATATGATTTCCGATTCAAATAAGCGAGTATATTCAAGTGGAGATGCCTATCCAAACTCTACAAAACTCCCCAAAGGAGAATACAGTTTACAACTATATGTAAGGCATGAAGACTTGCAGATTTTGGAAAAGATGAAGCATCTGGTGTTATTCATTGAGAGAAATTTAGAAGATAAGGACATCATTCGGTTAAGCTTTTTCTCTAAGCCAGATGGCCCATTGATGGGAAATGGTTCCTTTAAGTCCTCAACATTAATTCCAGGCATAAAAGAAGGATTTTATCTTGGTCCACCACCAAAAGACAAGCTTCCCAAGAACTCTCTGCAAGGATCTGTATTGGTCGGATCAATATCATATGGAAAACTATCATTTGCCGGACAGGGGGAGCATAAAAACCCAGAGAAGCACCCTGCATCATATCGAATTTCTTATATAGTTCCTCCAAATAAGATTGACGAGGACAAAGGAAAAACTTCTTTATCTTCCAAGAAGACTGTTTCTGAACGTTTAGAAGAAGAGGTGCGAGATGCAAAAATAAAAGTGCTAGGAGGGATAAAACAAGAAAGTGATGAAGATCTCTTAGAATGGAACAAGTTGTCTGTCTTGCTCAAGTCGGAATATCCAAAGTACACTCCGTTGCTTGCAAAGATTTTGGAAGGCTTGGTTTCTAGGAGTAATATCAAAGACAAATCCCATCATCATGAAGAGGTAATTAATGCAGCAAATGAGGTGATCGACAGTATTGATAGAGAAGAGCTGGCAAAAAATTTTGCACTGAAAAGTGATCTGGATGATGAGGAAGCACAGAAAACCAAGAAAAAGATAGAATCAACCCGGGACCAGTTAGCAGAGGCACTTTACCAGAAGGGGCTTGCACTAGCAGAAATTGAGTCTTTAAAGGAGGTAGATAACTCCCCGGCTGCAGCTACAACAGAAGGTGCAAATCCCGACGAGCAATCAAAGGATGATGGCATTCATCCAGATTTGTTTGATGAAAACTTTAAGGAACTGAAGAAATGGGTTGACGTTAAGTGCACAAAATATGGGATCCTGTTGGTGACACACGAGAAGCGTAGTCAAAGGATTGGGACAGCATTGAAGGTACTAACTGACATAATTCAAGACGATACTGAGCCTGCGAAGAAGAAACTATATGAACTAAAGCTCTCTTTGCTTGAAGAAGTTGGATGGAATCATTTAGCTACATATGAGAGACAGTGGATGCTTGTACGTTTTCCCCCTAGCCTACCCCTTTTCTAG

Protein sequence

>Msa1428050

WTVKVDPKFHEDANKLEDLVVFEECIELHSSDSTVVKAPEYLLLTHNGRTFNILVDPINLCDGLHYYEVYGIDCKAPWRGHIERKYVEVPHGASWVEATMNLSSFDTPRRFFVDTVQICPLQRPLKWRSVITFSSPAAKNFTFKVVSGQTLELVIAQFWSSGIGSHETTNVDLKIVFHGIKASQEVIVLDGSEAPVRVDAEALLASEKLTPVANLNKIRVPYRPVDSKISALSNDRDKLPSGKQMLALTLTYKVKLDDGAEIKPQIPFLNGRIYDTKFESQFYMISDSNKRVYSSGDAYPNSTKLPKGEYSLQLYVRHEDLQILEKMKHLVLFIERNLEDKDIIRLSFFSKPDGPLMGNGSFKSSTLIPGIKEGFYLGPPPKDKLPKNSLQGSVLVGSISYGKLSFAGQGEHKNPEKHPASYRISYIVPPNKIDEDKGKTSLSSKKTVSERLEEEVRDAKIKVLGGIKQESDEDLLEWNKLSVLLKSEYPKYTPLLAKILEGLVSRSNIKDKSHHHEEVINAANEVIDSIDREELAKNFALKSDLDDEEAQKTKKKIESTRDQLAEALYQKGLALAEIESLKEVDNSPAAATTEGANPDEQSKDDGIHPDLFDENFKELKKWVDVKCTKYGILLVTHEKRSQRIGTALKVLTDIIQDDTEPAKKKLYELKLSLLEEVGWNHLATYERQWMLVRFPPSLPLF*