Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0556560 | XP_003608060.1 | 93.363 | 663 | 28 | 5 | 1 | 657 | 1 | 653 | 0.0 | 1129 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0556560 | sp|Q8L3P4|THAL_ARATH | 43.062 | 699 | 309 | 20 | 1 | 655 | 1 | 654 | 2.96e-122 | 380 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0556560 | G7JNK9 | 93.363 | 663 | 28 | 5 | 1 | 657 | 1 | 653 | 0.0 | 1129 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0283990 | Msa0556560 | 0.812239 | 4.685285e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0556560 | MtrunA17_Chr4g0045541 | 93.363 | 663 | 28 | 5 | 1 | 657 | 1 | 653 | 0.0 | 1129 |
| Msa0556560 | MtrunA17_Chr5g0447351 | 62.656 | 241 | 61 | 4 | 423 | 657 | 12 | 229 | 2.83e-81 | 256 |
| Msa0556560 | MtrunA17_Chr3g0132641 | 31.193 | 109 | 74 | 1 | 224 | 332 | 16 | 123 | 7.65e-14 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0556560 | AT2G43650.1 | 43.062 | 699 | 309 | 20 | 1 | 655 | 1 | 654 | 3.01e-123 | 380 |
| Msa0556560 | AT3G28230.1 | 55.556 | 117 | 49 | 2 | 541 | 657 | 60 | 173 | 1.26e-26 | 107 |
| Msa0556560 | AT3G28230.2 | 55.556 | 117 | 49 | 2 | 541 | 657 | 61 | 174 | 1.31e-26 | 107 |
| Msa0556560 | AT1G07840.2 | 25.547 | 137 | 102 | 0 | 210 | 346 | 1 | 137 | 3.02e-15 | 77.8 |
| Msa0556560 | AT1G07840.1 | 25.547 | 137 | 102 | 0 | 210 | 346 | 1 | 137 | 3.02e-15 | 77.8 |
| Msa0556560 | AT1G07840.3 | 26.119 | 134 | 99 | 0 | 213 | 346 | 4 | 137 | 4.00e-15 | 76.6 |
Find 161 sgRNAs with CRISPR-Local
Find 558 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCAGTTGGGAGGGGTATTT+AGG | 0.097495 | 4_1:-54821875 | None:intergenic |
| ATCTCTTGTGAAGGTTAAAA+AGG | 0.178594 | 4_1:+54825249 | Msa0556560:intron |
| CAATTTCTTCCTCTTCCTTT+GGG | 0.184787 | 4_1:-54823125 | None:intergenic |
| GTTTGGTTTGTTTAGTAATT+AGG | 0.196859 | 4_1:+54822826 | Msa0556560:intron |
| TATTTAGGGTTTATGAATTA+TGG | 0.202339 | 4_1:-54821860 | None:intergenic |
| AACATCTTTGGCATATTAAA+TGG | 0.208397 | 4_1:+54829916 | Msa0556560:three_prime_UTR |
| GACAACCAATCAACTAATTC+TGG | 0.211578 | 4_1:-54824547 | None:intergenic |
| AGTACCTTGTAGTTCTTTCT+AGG | 0.224222 | 4_1:-54829552 | None:intergenic |
| CACAGTCTCCTCTGGCAAAA+AGG | 0.233544 | 4_1:-54829362 | None:intergenic |
| GGCAAGGAGAAGGGCTTTAT+TGG | 0.240030 | 4_1:+54822511 | Msa0556560:CDS |
| GATGATGCTGTGGTTGTTAA+TGG | 0.242057 | 4_1:+54827566 | Msa0556560:CDS |
| GCAATTTCTTCCTCTTCCTT+TGG | 0.261826 | 4_1:-54823126 | None:intergenic |
| AACCTCATCACCTGCTTAGA+TGG | 0.265694 | 4_1:+54829859 | Msa0556560:three_prime_UTR |
| GATTGGAAACTGAACATCTT+TGG | 0.290726 | 4_1:+54829904 | Msa0556560:three_prime_UTR |
| AGCAAACGGTGAAACTTTAC+TGG | 0.305493 | 4_1:-54827606 | None:intergenic |
| CTGTCCCTTGCGATTCTTAA+CGG | 0.332149 | 4_1:-54829690 | None:intergenic |
| GTAAAATACCCGAGAGAAAC+TGG | 0.341689 | 4_1:+54821778 | None:intergenic |
| TCTTCAAGGCGAGCTATTAC+AGG | 0.346861 | 4_1:-54825397 | None:intergenic |
| TCACGAATAGCGTCTCTCTT+AGG | 0.351316 | 4_1:-54829028 | None:intergenic |
| GATCAAGGAATTAATGAATC+AGG | 0.364978 | 4_1:+54825420 | Msa0556560:CDS |
| ATCACTACCACTGCTTCTTC+TGG | 0.366961 | 4_1:-54827026 | None:intergenic |
| TCCCCGCCATAAGGTGCATT+TGG | 0.375526 | 4_1:-54829731 | None:intergenic |
| TCAGTCGAAGTATCAGATTC+AGG | 0.375688 | 4_1:+54829777 | Msa0556560:CDS |
| TTAATTCCTTGATCTCTTCA+AGG | 0.381679 | 4_1:-54825411 | None:intergenic |
| TAACTTGTATAATTATTGAT+TGG | 0.392558 | 4_1:+54829887 | Msa0556560:three_prime_UTR |
| AGAATGTCCTCAAGTTCAAC+TGG | 0.400387 | 4_1:-54826891 | None:intergenic |
| GCAGTTGGGAGGGGTATTTA+GGG | 0.400777 | 4_1:-54821874 | None:intergenic |
| GGACTTGAGTAGAAGGTAGA+AGG | 0.410082 | 4_1:-54825350 | None:intergenic |
| AGAAGGCCAAATGCACCTTA+TGG | 0.411416 | 4_1:+54829725 | Msa0556560:CDS |
| ATGATGCTGTGGTTGTTAAT+GGG | 0.413234 | 4_1:+54827567 | Msa0556560:CDS |
| GCCCTTCGGACTTGAGTAGA+AGG | 0.419489 | 4_1:-54825357 | None:intergenic |
| GCGATAGAATCGGCTGGCAT+TGG | 0.439610 | 4_1:-54826966 | None:intergenic |
| AGCTGCAAAACGCGCTGCAA+AGG | 0.440245 | 4_1:+54829222 | Msa0556560:CDS |
| CTGCCCCAGAATTAGTTGAT+TGG | 0.442694 | 4_1:+54824542 | Msa0556560:CDS |
| TAGAACAATATTGTAATGTA+AGG | 0.444909 | 4_1:-54829819 | None:intergenic |
| TTTCCGTCCACAGTCTCCTC+TGG | 0.445026 | 4_1:-54829370 | None:intergenic |
| TCACATTGGCGTGCAGAGTT+CGG | 0.445495 | 4_1:+54827323 | Msa0556560:CDS |
| AAGCGTTCGAGACCAGCTAA+TGG | 0.448914 | 4_1:+54827435 | Msa0556560:CDS |
| TGACCTACTCAACCTCTTCA+AGG | 0.452976 | 4_1:+54829248 | Msa0556560:CDS |
| GACGGCGGCGCAGTTGGGAG+GGG | 0.453532 | 4_1:-54821883 | None:intergenic |
| AAAGTTATAACGGTCGCGTC+GGG | 0.455333 | 4_1:-54822083 | None:intergenic |
| CTTTCGTCTTCTTCAACCTC+CGG | 0.457947 | 4_1:+54821936 | Msa0556560:five_prime_UTR |
| CGTAAGACGGCGGCGCAGTT+GGG | 0.459054 | 4_1:-54821888 | None:intergenic |
| TACCCGAGAGAAACTGGTTC+GGG | 0.462506 | 4_1:+54821784 | None:intergenic |
| GAAGGTTATAGCTTGGCAAT+AGG | 0.464718 | 4_1:-54825332 | None:intergenic |
| ACAACCAATCAACTAATTCT+GGG | 0.466223 | 4_1:-54824546 | None:intergenic |
| GGCCAAATGCACCTTATGGC+GGG | 0.470614 | 4_1:+54829729 | Msa0556560:CDS |
| AAGCGGGTGATGGCTGGTGC+TGG | 0.472372 | 4_1:+54829070 | Msa0556560:CDS |
| ATAACCTTATCATTGAAAAC+AGG | 0.475949 | 4_1:-54822309 | None:intergenic |
| TGATGATGGTGATGATCAAA+TGG | 0.479990 | 4_1:+54829114 | Msa0556560:CDS |
| GTGGTTGTTAATGGGCCAGC+TGG | 0.481470 | 4_1:+54827575 | Msa0556560:CDS |
| TTCATCTCAACTACATTGCT+AGG | 0.486326 | 4_1:-54827144 | None:intergenic |
| AGCGTTCGAGACCAGCTAAT+GGG | 0.494581 | 4_1:+54827436 | Msa0556560:CDS |
| AGCTCGCCTTGAAGAGATCA+AGG | 0.498098 | 4_1:+54825405 | Msa0556560:CDS |
| ATGATCGACTTGCTGCCCTT+CGG | 0.498169 | 4_1:-54825371 | None:intergenic |
| CCAGTGGATTCCCCGCCATA+AGG | 0.499092 | 4_1:-54829740 | None:intergenic |
| CCTTATGGCGGGGAATCCAC+TGG | 0.499825 | 4_1:+54829740 | Msa0556560:CDS |
| ACGTAAGACGGCGGCGCAGT+TGG | 0.500239 | 4_1:-54821889 | None:intergenic |
| TATGAATTATGGAGATAACT+AGG | 0.501868 | 4_1:-54821849 | None:intergenic |
| AGACGGCGGCGCAGTTGGGA+GGG | 0.508923 | 4_1:-54821884 | None:intergenic |
| AGCAAATGAACGTTCTGTAT+AGG | 0.509672 | 4_1:+54823428 | Msa0556560:CDS |
| CGTTAAGAATCGCAAGGGAC+AGG | 0.510804 | 4_1:+54829691 | Msa0556560:CDS |
| CAGGTGATGAGGTTCAAAAT+TGG | 0.511895 | 4_1:-54829850 | None:intergenic |
| AATTGCAATAAAAGAACAAA+GGG | 0.514657 | 4_1:+54823143 | Msa0556560:CDS |
| AAGACGGCGGCGCAGTTGGG+AGG | 0.515511 | 4_1:-54821885 | None:intergenic |
| AGGAAGAAAAGCAAAAGATC+AGG | 0.516248 | 4_1:+54827200 | Msa0556560:CDS |
| TTCAGATTAGCATTAGCAAA+CGG | 0.516640 | 4_1:-54827620 | None:intergenic |
| ATACCCGAGAGAAACTGGTT+CGG | 0.516975 | 4_1:+54821783 | None:intergenic |
| AATTTCTTCCTCTTCCTTTG+GGG | 0.517199 | 4_1:-54823124 | None:intergenic |
| GTGATGAGGTTCAAAATTGG+TGG | 0.517459 | 4_1:-54829847 | None:intergenic |
| TTCGTTTAAAGCGATAGAAT+CGG | 0.519165 | 4_1:-54826976 | None:intergenic |
| AAAGCGCTATATCACTTCTC+AGG | 0.520939 | 4_1:+54829390 | Msa0556560:CDS |
| ACCTCATCACCTGCTTAGAT+GGG | 0.523545 | 4_1:+54829860 | Msa0556560:three_prime_UTR |
| TAATACAGAATGGCGAAGAA+AGG | 0.532238 | 4_1:+54822013 | Msa0556560:exon |
| TTTAAACGAAGAACAGCCTC+TGG | 0.535066 | 4_1:+54826989 | Msa0556560:CDS |
| TGAATATGATGGCAAGGAGA+AGG | 0.537122 | 4_1:+54822501 | Msa0556560:CDS |
| GTGAAGCTATACCCATTAGC+TGG | 0.546075 | 4_1:-54827447 | None:intergenic |
| CATGAGAAGCGGGTGATGGC+TGG | 0.546130 | 4_1:+54829064 | Msa0556560:CDS |
| TGACGAGGCCCCAAAGGAAG+AGG | 0.547359 | 4_1:+54823116 | Msa0556560:CDS |
| CCTCTTCATCATGAGGTACA+AGG | 0.547989 | 4_1:-54829141 | None:intergenic |
| CAGAGGAATGCAACGTAAGA+CGG | 0.550352 | 4_1:-54821901 | None:intergenic |
| GGTATTAAGAAAACTATCGT+TGG | 0.551126 | 4_1:+54822918 | Msa0556560:CDS |
| GAAGGTAGAAGGTTATAGCT+TGG | 0.551961 | 4_1:-54825339 | None:intergenic |
| TCACCTTGAAGAGGTTGAGT+AGG | 0.554310 | 4_1:-54829251 | None:intergenic |
| TCCAAAATTTCACCTTGAAG+AGG | 0.555565 | 4_1:-54829260 | None:intergenic |
| AGTTACACGCCCATCTAAGC+AGG | 0.558570 | 4_1:-54829869 | None:intergenic |
| GATAGTTGCATTAATTCCAG+TGG | 0.559627 | 4_1:-54829756 | None:intergenic |
| GAATCAGCATTAATGTCAAG+TGG | 0.560264 | 4_1:-54822258 | None:intergenic |
| CTTCAGTGGAAAAGTTATAA+CGG | 0.561135 | 4_1:-54822093 | None:intergenic |
| CAAGATGAAGAAGACGATGA+AGG | 0.563625 | 4_1:+54822897 | Msa0556560:CDS |
| GATGAAGAGGACATTGAAAG+TGG | 0.563927 | 4_1:+54829154 | Msa0556560:CDS |
| CCTTGTACCTCATGATGAAG+AGG | 0.564381 | 4_1:+54829141 | Msa0556560:CDS |
| TACCTTCTACTCAAGTCCGA+AGG | 0.569691 | 4_1:+54825355 | Msa0556560:CDS |
| AGGCTACAGACTTCACTGCC+AGG | 0.569829 | 4_1:-54821814 | None:intergenic |
| CATTATCTTCGTCTTCCACA+AGG | 0.570008 | 4_1:-54823200 | None:intergenic |
| GAATATGATGGCAAGGAGAA+GGG | 0.570082 | 4_1:+54822502 | Msa0556560:CDS |
| TGAACTTCCAGTTGAACTTG+AGG | 0.572238 | 4_1:+54826884 | Msa0556560:CDS |
| ATTGAGGATGATAATGATGA+TGG | 0.574706 | 4_1:+54829100 | Msa0556560:CDS |
| AAGACATGAGAAGCGGGTGA+TGG | 0.576224 | 4_1:+54829060 | Msa0556560:CDS |
| ATTCGCAGTTCATAAGCAGA+GGG | 0.581409 | 4_1:+54822227 | Msa0556560:intron |
| GGATCTGAGTGCTTTGTCAA+AGG | 0.583517 | 4_1:+54823402 | Msa0556560:CDS |
| ATGAAGAGGACATTGAAAGT+GGG | 0.585323 | 4_1:+54829155 | Msa0556560:CDS |
| TTGCCAGAGGAGACTGTGGA+CGG | 0.586314 | 4_1:+54829367 | Msa0556560:CDS |
| TAATGTAACTTTCAATGTCG+AGG | 0.587478 | 4_1:+54823381 | Msa0556560:CDS |
| TCAGAATAGAGAGCAAATAC+CGG | 0.589160 | 4_1:-54821955 | None:intergenic |
| AAGTGATGACGAGGCCCCAA+AGG | 0.591250 | 4_1:+54823110 | Msa0556560:CDS |
| TTTAAAGCGATAGAATCGGC+TGG | 0.591664 | 4_1:-54826972 | None:intergenic |
| AATCATCATATGTTGCAAGC+TGG | 0.591742 | 4_1:-54827541 | None:intergenic |
| CTCGTCGTCCATGTCTTCAG+TGG | 0.594619 | 4_1:-54822107 | None:intergenic |
| TTACTGGAGACAAGACCAGC+TGG | 0.596369 | 4_1:-54827590 | None:intergenic |
| AAATCAGATTCCTTAAAGGA+TGG | 0.597906 | 4_1:+54827168 | Msa0556560:CDS |
| GGATGATGAATATGATGGCA+AGG | 0.599227 | 4_1:+54822495 | Msa0556560:CDS |
| AGTACTATTCAAGATTTCGC+CGG | 0.601307 | 4_1:+54821981 | Msa0556560:five_prime_UTR |
| GCCAAATGCACCTTATGGCG+GGG | 0.602795 | 4_1:+54829730 | Msa0556560:CDS |
| AAATATTTGAAGTCGTTGCA+TGG | 0.603177 | 4_1:+54822855 | Msa0556560:CDS |
| GATTCGCAGTTCATAAGCAG+AGG | 0.607779 | 4_1:+54822226 | Msa0556560:intron |
| ACGGAAAAGACATGAGAAGC+GGG | 0.607910 | 4_1:+54829054 | Msa0556560:CDS |
| TACAGAATGGCGAAGAAAGG+AGG | 0.608179 | 4_1:+54822016 | Msa0556560:exon |
| ACCTTCTACTCAAGTCCGAA+GGG | 0.608313 | 4_1:+54825356 | Msa0556560:CDS |
| TGCTAATCTGAAGAAACTCA+AGG | 0.616624 | 4_1:+54827631 | Msa0556560:CDS |
| GACAGGTTCAGAGTATCAGA+AGG | 0.617166 | 4_1:+54829708 | Msa0556560:CDS |
| AAATTGCAATAAAAGAACAA+AGG | 0.617287 | 4_1:+54823142 | Msa0556560:CDS |
| AAAAGTTATAACGGTCGCGT+CGG | 0.620460 | 4_1:-54822084 | None:intergenic |
| TGAAGAGGACATTGAAAGTG+GGG | 0.620480 | 4_1:+54829156 | Msa0556560:CDS |
| AGGCCAAATGCACCTTATGG+CGG | 0.622008 | 4_1:+54829728 | Msa0556560:CDS |
| TCAATGTCCTCTTCATCATG+AGG | 0.622536 | 4_1:-54829148 | None:intergenic |
| AAAAGCCGTTAAGAATCGCA+AGG | 0.624113 | 4_1:+54829685 | Msa0556560:CDS |
| GGGGAAATAGTTATGGAAGG+AGG | 0.627308 | 4_1:+54825271 | Msa0556560:CDS |
| TAACTAGGTTGCTGTGTGCG+AGG | 0.627819 | 4_1:-54821834 | None:intergenic |
| CACTGATGAGGATGGCGACG+AGG | 0.628347 | 4_1:+54822453 | Msa0556560:CDS |
| GACGAGGATGATGAATATGA+TGG | 0.633701 | 4_1:+54822490 | Msa0556560:CDS |
| AGAATGGCGAAGAAAGGAGG+AGG | 0.635908 | 4_1:+54822019 | Msa0556560:exon |
| TGGTGCTGGAGTTACGATTG+AGG | 0.636247 | 4_1:+54829084 | Msa0556560:CDS |
| GCCCATCTAAGCAGGTGATG+AGG | 0.636843 | 4_1:-54829861 | None:intergenic |
| TCTGAGTGCTTTGTCAAAGG+AGG | 0.637865 | 4_1:+54823405 | Msa0556560:CDS |
| TACGATTATCAGCACCATGT+CGG | 0.646336 | 4_1:-54822950 | None:intergenic |
| GTTGGAAGAAAGCACCGACA+TGG | 0.649199 | 4_1:+54822936 | Msa0556560:CDS |
| CAACCAATCAACTAATTCTG+GGG | 0.649259 | 4_1:-54824545 | None:intergenic |
| TGATGAGGATGGCGACGAGG+AGG | 0.649473 | 4_1:+54822456 | Msa0556560:CDS |
| GACGGAAAAGACATGAGAAG+CGG | 0.650381 | 4_1:+54829053 | Msa0556560:CDS |
| AAAAGTTAGAGCTTCCCTTG+AGG | 0.652712 | 4_1:+54827353 | Msa0556560:CDS |
| CTGTAGATGTCGAAGAACAG+AGG | 0.656488 | 4_1:+54829495 | Msa0556560:intron |
| GAATAGAGAGCAAATACCGG+AGG | 0.665723 | 4_1:-54821952 | None:intergenic |
| GAAAGCAAAACAATATACAG+AGG | 0.665792 | 4_1:+54823167 | Msa0556560:CDS |
| TTGCATGGTGGAGATGAAGA+CGG | 0.669329 | 4_1:+54822870 | Msa0556560:CDS |
| AATGATGACACTGATGAGGA+TGG | 0.671827 | 4_1:+54822445 | Msa0556560:CDS |
| TGAATCACCAGAAGAAGCAG+TGG | 0.672149 | 4_1:+54827019 | Msa0556560:CDS |
| AAAGCCGTTAAGAATCGCAA+GGG | 0.675175 | 4_1:+54829686 | Msa0556560:CDS |
| ACTAACTCGTAGTCGCAACA+AGG | 0.675677 | 4_1:+54829518 | Msa0556560:CDS |
| GGTGATTCAGCAGAGACCAG+AGG | 0.679046 | 4_1:-54827005 | None:intergenic |
| GAATCCTAGAAAGAACTACA+AGG | 0.680340 | 4_1:+54829548 | Msa0556560:CDS |
| ACATGGCAGAAGGATCACAT+TGG | 0.681753 | 4_1:+54827309 | Msa0556560:intron |
| TGATAATGATGACACTGATG+AGG | 0.687423 | 4_1:+54822441 | Msa0556560:CDS |
| TATTTGAAGTCGTTGCATGG+TGG | 0.689833 | 4_1:+54822858 | Msa0556560:CDS |
| GCTACAATCAAGTGATGACG+AGG | 0.691085 | 4_1:+54823101 | Msa0556560:intron |
| GAAAGTGAGAAGTAACGCAG+AGG | 0.691943 | 4_1:-54821918 | None:intergenic |
| GGAGGAAGACAATGATGACG+AGG | 0.699941 | 4_1:+54822474 | Msa0556560:CDS |
| AGGAATGCAACGTAAGACGG+CGG | 0.709406 | 4_1:-54821898 | None:intergenic |
| GAAGAGGACATTGAAAGTGG+GGG | 0.720818 | 4_1:+54829157 | Msa0556560:CDS |
| GAGACGCTATTCGTGAACGA+CGG | 0.728552 | 4_1:+54829035 | Msa0556560:CDS |
| TTGGTTGTCAGAATTAAACG+AGG | 0.733976 | 4_1:+54824561 | Msa0556560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATCAAATTTTAATCATC+AGG | - | chr4_1:54822159-54822178 | None:intergenic | 15.0% |
| !! | TAAAAAAACAAAATCAGATT+TGG | - | chr4_1:54822342-54822361 | None:intergenic | 15.0% |
| !!! | AATTTTTTTTTTCTGTTTAC+AGG | + | chr4_1:54822414-54822433 | Msa0556560:intron | 15.0% |
| !!! | TAATGAGAAATTAACTTTTA+AGG | + | chr4_1:54823218-54823237 | Msa0556560:CDS | 15.0% |
| !!! | GTAATCTTTTATATTTTTAC+AGG | + | chr4_1:54823348-54823367 | Msa0556560:intron | 15.0% |
| !!! | TTTTCTTTTTCAATCAATTT+TGG | - | chr4_1:54823880-54823899 | None:intergenic | 15.0% |
| !! | AAATAAATTGTAACACAATA+TGG | - | chr4_1:54825228-54825247 | None:intergenic | 15.0% |
| !! | AATTCATTAATGAAATAAAC+TGG | + | chr4_1:54826496-54826515 | Msa0556560:intron | 15.0% |
| !! | AAATAAGACATAAATATACA+AGG | - | chr4_1:54827067-54827086 | None:intergenic | 15.0% |
| !! | TATTTATTTATCGTTGTAAA+AGG | + | chr4_1:54827261-54827280 | Msa0556560:intron | 15.0% |
| !! | TAATGGTGTAAATTAAAATT+TGG | - | chr4_1:54828547-54828566 | None:intergenic | 15.0% |
| !!! | TAACTTGTATAATTATTGAT+TGG | + | chr4_1:54829887-54829906 | Msa0556560:three_prime_UTR | 15.0% |
| !!! | TATTTAGGGTTTATGAATTA+TGG | - | chr4_1:54821863-54821882 | None:intergenic | 20.0% |
| !!! | TTAATTTCCTTTGTTACTTT+TGG | + | chr4_1:54822751-54822770 | Msa0556560:intron | 20.0% |
| !! | TAAAGTCGAATTTATTCAAA+AGG | + | chr4_1:54822781-54822800 | Msa0556560:intron | 20.0% |
| !! | TTCTGATAAATATACATGTT+TGG | + | chr4_1:54822809-54822828 | Msa0556560:intron | 20.0% |
| !! | TTTGAGCATAATATTTGTAA+AGG | + | chr4_1:54822988-54823007 | Msa0556560:intron | 20.0% |
| !!! | AATGTTTTAGATATTACACA+CGG | - | chr4_1:54823020-54823039 | None:intergenic | 20.0% |
| !! | AGAGAAACAATAAAAAGTAA+GGG | - | chr4_1:54823055-54823074 | None:intergenic | 20.0% |
| !! | AAGAGAAACAATAAAAAGTA+AGG | - | chr4_1:54823056-54823075 | None:intergenic | 20.0% |
| !! | AAATTGCAATAAAAGAACAA+AGG | + | chr4_1:54823142-54823161 | Msa0556560:CDS | 20.0% |
| !! | AATTGCAATAAAAGAACAAA+GGG | + | chr4_1:54823143-54823162 | Msa0556560:CDS | 20.0% |
| !!! | TCATTTTTTCAGTTTCAATT+TGG | - | chr4_1:54823626-54823645 | None:intergenic | 20.0% |
| !!! | TCTAAAATTCAAAGTTGTTT+AGG | - | chr4_1:54823659-54823678 | None:intergenic | 20.0% |
| !!! | TAAACAACTTTGAATTTTAG+AGG | + | chr4_1:54823658-54823677 | Msa0556560:intron | 20.0% |
| !! | TGTATATACTCAAGATATTA+AGG | + | chr4_1:54823798-54823817 | Msa0556560:intron | 20.0% |
| !!! | GTCATTTCTAATCATTTTTT+CGG | - | chr4_1:54823854-54823873 | None:intergenic | 20.0% |
| !! | AAAAAGAAAAGAATGTAAGA+AGG | + | chr4_1:54823890-54823909 | Msa0556560:intron | 20.0% |
| !!! | ATAATTTTCATTTTGTGAAG+CGG | + | chr4_1:54824096-54824115 | Msa0556560:intron | 20.0% |
| !! | TTATTTATGTTGTTCTACTT+GGG | + | chr4_1:54825189-54825208 | Msa0556560:intron | 20.0% |
| !! | TTAGAAAATATTCATAGCAT+TGG | + | chr4_1:54825734-54825753 | Msa0556560:intron | 20.0% |
| !!! | TAATTTTACAGTATTATTGC+CGG | + | chr4_1:54826551-54826570 | Msa0556560:intron | 20.0% |
| !! | AATGGTTCAACTTAATTTAT+TGG | + | chr4_1:54826598-54826617 | Msa0556560:intron | 20.0% |
| !! | GGTGTATTTAGAAAAATTTA+AGG | + | chr4_1:54828414-54828433 | Msa0556560:intron | 20.0% |
| !!! | ATATCTTATTTCTAAGAACT+TGG | - | chr4_1:54828513-54828532 | None:intergenic | 20.0% |
| !! | AATAAGAATTATGTTGTGAA+GGG | - | chr4_1:54828608-54828627 | None:intergenic | 20.0% |
| !! | AAATAAGAATTATGTTGTGA+AGG | - | chr4_1:54828609-54828628 | None:intergenic | 20.0% |
| !! | AAACTAAAATCTAGATAAGT+TGG | + | chr4_1:54828665-54828684 | Msa0556560:intron | 20.0% |
| !! | GTCAAATTTAAATGTTCAAT+TGG | + | chr4_1:54829605-54829624 | Msa0556560:intron | 20.0% |
| !! | TAGAACAATATTGTAATGTA+AGG | - | chr4_1:54829822-54829841 | None:intergenic | 20.0% |
| ! | TATGAATTATGGAGATAACT+AGG | - | chr4_1:54821852-54821871 | None:intergenic | 25.0% |
| !!! | TTCTGTATTAGTTTTTTCAC+CGG | - | chr4_1:54822003-54822022 | None:intergenic | 25.0% |
| ! | GTGAAAAAACTAATACAGAA+TGG | + | chr4_1:54822003-54822022 | Msa0556560:exon | 25.0% |
| !!! | ATTTTAATCATCAGGTGAAA+AGG | - | chr4_1:54822151-54822170 | None:intergenic | 25.0% |
| ! | ATAACCTTATCATTGAAAAC+AGG | - | chr4_1:54822312-54822331 | None:intergenic | 25.0% |
| ! | AATTAACCAAACAAAGTTGA+AGG | - | chr4_1:54822389-54822408 | None:intergenic | 25.0% |
| !! | TTTTATATGCATGTATAAGC+TGG | + | chr4_1:54822707-54822726 | Msa0556560:intron | 25.0% |
| ! | TTTATATGCATGTATAAGCT+GGG | + | chr4_1:54822708-54822727 | Msa0556560:intron | 25.0% |
| ! | AAAACTTCCAAAAGTAACAA+AGG | - | chr4_1:54822761-54822780 | None:intergenic | 25.0% |
| !!! | GTTTGGTTTGTTTAGTAATT+AGG | + | chr4_1:54822826-54822845 | Msa0556560:intron | 25.0% |
| !! | CTTGAATAATTGTAACTTGT+TGG | + | chr4_1:54823073-54823092 | Msa0556560:intron | 25.0% |
| !!! | TATATTTTTACAGGATGCAT+CGG | + | chr4_1:54823357-54823376 | Msa0556560:intron | 25.0% |
| ! | ACACAATCGATATATATCAA+TGG | - | chr4_1:54823477-54823496 | None:intergenic | 25.0% |
| !!! | AATCAGTTTTTTTCATCTGT+AGG | - | chr4_1:54823578-54823597 | None:intergenic | 25.0% |
| ! | TTTCAAGAGTAAGCATATAT+TGG | + | chr4_1:54823596-54823615 | Msa0556560:intron | 25.0% |
| ! | CAAGATATTAAGGACATAAA+TGG | + | chr4_1:54823808-54823827 | Msa0556560:intron | 25.0% |
| !!! | CTAATCATTTTTTCGGTTTT+GGG | - | chr4_1:54823847-54823866 | None:intergenic | 25.0% |
| !!! | TCTAATCATTTTTTCGGTTT+TGG | - | chr4_1:54823848-54823867 | None:intergenic | 25.0% |
| !!! | CTTTTTCAATCAATTTTGGT+AGG | - | chr4_1:54823876-54823895 | None:intergenic | 25.0% |
| ! | AAACAAAAAAATCATGCTGA+AGG | - | chr4_1:54824135-54824154 | None:intergenic | 25.0% |
| !!! | GCATGATTTTTTTGTTTTGT+TGG | + | chr4_1:54824138-54824157 | Msa0556560:intron | 25.0% |
| !! | TTTTCAACCCATATTTTTCT+AGG | + | chr4_1:54824429-54824448 | Msa0556560:intron | 25.0% |
| ! | AATTCAGCCTAGAAAAATAT+GGG | - | chr4_1:54824439-54824458 | None:intergenic | 25.0% |
| !!! | AATTAACCCATTTTTAAGCA+AGG | + | chr4_1:54824606-54824625 | Msa0556560:CDS | 25.0% |
| ! | GAAAAACCTTGCTTAAAAAT+GGG | - | chr4_1:54824615-54824634 | None:intergenic | 25.0% |
| ! | AGAAAAACCTTGCTTAAAAA+TGG | - | chr4_1:54824616-54824635 | None:intergenic | 25.0% |
| ! | CAATAAACTTCAATTACTGT+AGG | - | chr4_1:54824748-54824767 | None:intergenic | 25.0% |
| !! | CGTGGTTTTCATAATATTTT+TGG | - | chr4_1:54824784-54824803 | None:intergenic | 25.0% |
| ! | CTTATTTATGTTGTTCTACT+TGG | + | chr4_1:54825188-54825207 | Msa0556560:intron | 25.0% |
| ! | ATTTATTTCATCTCTTGTGA+AGG | + | chr4_1:54825240-54825259 | Msa0556560:intron | 25.0% |
| !!! | CAAAGCAATTTGTTAGAATT+CGG | - | chr4_1:54825568-54825587 | None:intergenic | 25.0% |
| ! | TACTAAATGTTGTCAAACAA+TGG | + | chr4_1:54825608-54825627 | Msa0556560:intron | 25.0% |
| ! | GATGAATGACTTTATGTAAT+GGG | - | chr4_1:54825814-54825833 | None:intergenic | 25.0% |
| !!! | GTACTTCATGTTTAAGTTTT+TGG | + | chr4_1:54826038-54826057 | Msa0556560:intron | 25.0% |
| !!! | TTTTTAACTTTTCTGTACTG+TGG | + | chr4_1:54826385-54826404 | Msa0556560:intron | 25.0% |
| ! | CCAAAGATATTCAAATAAGA+TGG | - | chr4_1:54826416-54826435 | None:intergenic | 25.0% |
| !! | CCATCTTATTTGAATATCTT+TGG | + | chr4_1:54826413-54826432 | Msa0556560:intron | 25.0% |
| !! | ATCTTTGGTTTCTTGTATTA+TGG | + | chr4_1:54826428-54826447 | Msa0556560:intron | 25.0% |
| !!! | TACCTAAGCAATTTTAACAT+TGG | - | chr4_1:54826737-54826756 | None:intergenic | 25.0% |
| ! | TGCATAAAAATTAACTGTTG+AGG | - | chr4_1:54827115-54827134 | None:intergenic | 25.0% |
| ! | GAAAAAATCAGATTCCTTAA+AGG | + | chr4_1:54827164-54827183 | Msa0556560:CDS | 25.0% |
| !! | TTGTTTCAATTTTTCCTCAA+GGG | - | chr4_1:54827370-54827389 | None:intergenic | 25.0% |
| !! | TTTGTTTCAATTTTTCCTCA+AGG | - | chr4_1:54827371-54827390 | None:intergenic | 25.0% |
| ! | TGAGGAAAAATTGAAACAAA+AGG | + | chr4_1:54827371-54827390 | Msa0556560:CDS | 25.0% |
| ! | GAGGAAAAATTGAAACAAAA+GGG | + | chr4_1:54827372-54827391 | Msa0556560:CDS | 25.0% |
| !! | ACTCATTGAGATTTTATTGA+TGG | + | chr4_1:54827655-54827674 | Msa0556560:intron | 25.0% |
| !! | TTTTTGAACTCGAGATTAAA+AGG | - | chr4_1:54827748-54827767 | None:intergenic | 25.0% |
| !! | TAGAGTTGTCTTTTATATTG+AGG | - | chr4_1:54827900-54827919 | None:intergenic | 25.0% |
| ! | AAAAAATGTCTGACCAAAAT+TGG | - | chr4_1:54827933-54827952 | None:intergenic | 25.0% |
| ! | CACATATATACATCCAATAT+GGG | + | chr4_1:54828130-54828149 | Msa0556560:intron | 25.0% |
| ! | ACACCATTATAACTACAATT+TGG | + | chr4_1:54828558-54828577 | Msa0556560:intron | 25.0% |
| ! | CAACCAAATTGTAGTTATAA+TGG | - | chr4_1:54828564-54828583 | None:intergenic | 25.0% |
| ! | AGAAGCGAATTATCTTAAAA+TGG | + | chr4_1:54828711-54828730 | Msa0556560:intron | 25.0% |
| ! | TAGTTTCATATTGAAGAAGA+TGG | - | chr4_1:54829307-54829326 | None:intergenic | 25.0% |
| ! | CAAATTTGTAAGTGTTAACT+TGG | + | chr4_1:54829461-54829480 | Msa0556560:intron | 25.0% |
| ! | AACATCTTTGGCATATTAAA+TGG | + | chr4_1:54829916-54829935 | Msa0556560:three_prime_UTR | 25.0% |
| CTTCAGTGGAAAAGTTATAA+CGG | - | chr4_1:54822096-54822115 | None:intergenic | 30.0% | |
| ! | AATGCCTGTTTTCAATGATA+AGG | + | chr4_1:54822305-54822324 | Msa0556560:CDS | 30.0% |
| ! | AAATATTTGAAGTCGTTGCA+TGG | + | chr4_1:54822855-54822874 | Msa0556560:CDS | 30.0% |
| GGTATTAAGAAAACTATCGT+TGG | + | chr4_1:54822918-54822937 | Msa0556560:CDS | 30.0% | |
| ! | TGCTGATAATCGTAATTTTG+AGG | + | chr4_1:54822959-54822978 | Msa0556560:CDS | 30.0% |
| !!! | ATAATCGTAATTTTGAGGTG+AGG | + | chr4_1:54822964-54822983 | Msa0556560:intron | 30.0% |
| GAAAGCAAAACAATATACAG+AGG | + | chr4_1:54823167-54823186 | Msa0556560:CDS | 30.0% | |
| !!! | CACTTTTTCATCCATTAATG+TGG | - | chr4_1:54823294-54823313 | None:intergenic | 30.0% |
| !! | AATGGATGAAAAAGTGCTTA+CGG | + | chr4_1:54823298-54823317 | Msa0556560:intron | 30.0% |
| TAATGTAACTTTCAATGTCG+AGG | + | chr4_1:54823381-54823400 | Msa0556560:CDS | 30.0% | |
| AATCGATATATATCAATGGC+AGG | - | chr4_1:54823473-54823492 | None:intergenic | 30.0% | |
| ! | TTATCTGGTTTAGTAGCAAA+GGG | - | chr4_1:54823519-54823538 | None:intergenic | 30.0% |
| ! | ATTATCTGGTTTAGTAGCAA+AGG | - | chr4_1:54823520-54823539 | None:intergenic | 30.0% |
| ATTCACAGCTATGAATGAAA+TGG | - | chr4_1:54823553-54823572 | None:intergenic | 30.0% | |
| ! | ATTACAAAACTGATTAGCCA+AGG | + | chr4_1:54823716-54823735 | Msa0556560:intron | 30.0% |
| ! | TTACAAAACTGATTAGCCAA+GGG | + | chr4_1:54823717-54823736 | Msa0556560:intron | 30.0% |
| TATGTTTCTCTATTCACCAA+TGG | - | chr4_1:54823770-54823789 | None:intergenic | 30.0% | |
| TTGTCCTACTTTAGATGAAA+AGG | + | chr4_1:54823917-54823936 | Msa0556560:intron | 30.0% | |
| TCATTGTTTACCCTCAAATT+GGG | - | chr4_1:54823943-54823962 | None:intergenic | 30.0% | |
| TTCATTGTTTACCCTCAAAT+TGG | - | chr4_1:54823944-54823963 | None:intergenic | 30.0% | |
| TGAGGGTAAACAATGAAATA+AGG | + | chr4_1:54823947-54823966 | Msa0556560:intron | 30.0% | |
| GAGGGTAAACAATGAAATAA+GGG | + | chr4_1:54823948-54823967 | Msa0556560:intron | 30.0% | |
| ACTAATTATCCTCAAAGCAA+TGG | - | chr4_1:54824066-54824085 | None:intergenic | 30.0% | |
| ! | AATATGGGTTGAAAAGAAGA+GGG | - | chr4_1:54824424-54824443 | None:intergenic | 30.0% |
| ! | AAATATGGGTTGAAAAGAAG+AGG | - | chr4_1:54824425-54824444 | None:intergenic | 30.0% |
| CAATTCAGCCTAGAAAAATA+TGG | - | chr4_1:54824440-54824459 | None:intergenic | 30.0% | |
| ACAACCAATCAACTAATTCT+GGG | - | chr4_1:54824549-54824568 | None:intergenic | 30.0% | |
| GAACTACTCATGGAAAAAAT+GGG | - | chr4_1:54824667-54824686 | None:intergenic | 30.0% | |
| ! | GACTGATTCTAATATTCTAG+AGG | - | chr4_1:54824882-54824901 | None:intergenic | 30.0% |
| CATCAAAAATATATCTAGCG+AGG | + | chr4_1:54824920-54824939 | Msa0556560:intron | 30.0% | |
| AAAGAGACGCAAAAAATGAA+AGG | - | chr4_1:54824975-54824994 | None:intergenic | 30.0% | |
| TTTGCGTCTCTTTAAACTTT+AGG | + | chr4_1:54824982-54825001 | Msa0556560:intron | 30.0% | |
| TAACACTATAATTCCTCACA+GGG | - | chr4_1:54825046-54825065 | None:intergenic | 30.0% | |
| ATAACACTATAATTCCTCAC+AGG | - | chr4_1:54825047-54825066 | None:intergenic | 30.0% | |
| ACAGATACACTTAAAAACAG+TGG | - | chr4_1:54825080-54825099 | None:intergenic | 30.0% | |
| ATCTCTTGTGAAGGTTAAAA+AGG | + | chr4_1:54825249-54825268 | Msa0556560:intron | 30.0% | |
| TCTCTTGTGAAGGTTAAAAA+GGG | + | chr4_1:54825250-54825269 | Msa0556560:intron | 30.0% | |
| TAAAAAGGGGGAAATAGTTA+TGG | + | chr4_1:54825264-54825283 | Msa0556560:CDS | 30.0% | |
| TTAATTCCTTGATCTCTTCA+AGG | - | chr4_1:54825414-54825433 | None:intergenic | 30.0% | |
| GATCAAGGAATTAATGAATC+AGG | + | chr4_1:54825420-54825439 | Msa0556560:CDS | 30.0% | |
| ! | TGAACATTGCTGTTAAATAG+CGG | + | chr4_1:54825520-54825539 | Msa0556560:intron | 30.0% |
| TTGTTCTGCAATACATTGTT+TGG | + | chr4_1:54825585-54825604 | Msa0556560:intron | 30.0% | |
| ! | AATATTTTCTAACAGTGACC+AGG | - | chr4_1:54825726-54825745 | None:intergenic | 30.0% |
| ! | TGACTTTATGTAATGGGATT+GGG | - | chr4_1:54825808-54825827 | None:intergenic | 30.0% |
| ! | ATGACTTTATGTAATGGGAT+TGG | - | chr4_1:54825809-54825828 | None:intergenic | 30.0% |
| GGATGAATGACTTTATGTAA+TGG | - | chr4_1:54825815-54825834 | None:intergenic | 30.0% | |
| ACACTGTCAAAAAATGTAGA+CGG | - | chr4_1:54825888-54825907 | None:intergenic | 30.0% | |
| TACTGATATCACTGTAAATC+GGG | - | chr4_1:54826021-54826040 | None:intergenic | 30.0% | |
| ! | GTACTGATATCACTGTAAAT+CGG | - | chr4_1:54826022-54826041 | None:intergenic | 30.0% |
| !!! | TTTTTGGTTGCTTTTCTTTC+TGG | + | chr4_1:54826054-54826073 | Msa0556560:intron | 30.0% |
| CCGAAGACTTCAAATAAAAT+GGG | - | chr4_1:54826458-54826477 | None:intergenic | 30.0% | |
| !! | CCCATTTTATTTGAAGTCTT+CGG | + | chr4_1:54826455-54826474 | Msa0556560:intron | 30.0% |
| ! | CCATTGATTATCGTAAATAC+AGG | - | chr4_1:54826583-54826602 | None:intergenic | 30.0% |
| CCTGTATTTACGATAATCAA+TGG | + | chr4_1:54826580-54826599 | Msa0556560:intron | 30.0% | |
| ACACAATCCAATATAAGCAT+AGG | - | chr4_1:54826629-54826648 | None:intergenic | 30.0% | |
| ATATTGCATACATCCTACAT+TGG | + | chr4_1:54826652-54826671 | Msa0556560:intron | 30.0% | |
| CTCCAATGTTAAAATTGCTT+AGG | + | chr4_1:54826732-54826751 | Msa0556560:intron | 30.0% | |
| ! | TATCAAATCTGAGATGTACT+CGG | + | chr4_1:54826799-54826818 | Msa0556560:intron | 30.0% |
| ! | TTCGTTTAAAGCGATAGAAT+CGG | - | chr4_1:54826979-54826998 | None:intergenic | 30.0% |
| AAATCAGATTCCTTAAAGGA+TGG | + | chr4_1:54827168-54827187 | Msa0556560:CDS | 30.0% | |
| !!! | TTTTTTTGCACCATCCTTTA+AGG | - | chr4_1:54827181-54827200 | None:intergenic | 30.0% |
| TTAAAGGATGGTGCAAAAAA+AGG | + | chr4_1:54827180-54827199 | Msa0556560:CDS | 30.0% | |
| !! | TTTTGAGAATTACTAGGCTT+TGG | - | chr4_1:54827417-54827436 | None:intergenic | 30.0% |
| TTCAGATTAGCATTAGCAAA+CGG | - | chr4_1:54827623-54827642 | None:intergenic | 30.0% | |
| TGTAAGTATCTTACAAATGC+AGG | - | chr4_1:54827717-54827736 | None:intergenic | 30.0% | |
| TCGAGTTCAAAAAATGTCAT+TGG | + | chr4_1:54827755-54827774 | Msa0556560:intron | 30.0% | |
| CGAGTTCAAAAAATGTCATT+GGG | + | chr4_1:54827756-54827775 | Msa0556560:intron | 30.0% | |
| TTCAAAAAATGTCATTGGGA+CGG | + | chr4_1:54827760-54827779 | Msa0556560:intron | 30.0% | |
| AGTCTCTTGTCTATTGAAAT+TGG | + | chr4_1:54827822-54827841 | Msa0556560:intron | 30.0% | |
| GTCTCTTGTCTATTGAAATT+GGG | + | chr4_1:54827823-54827842 | Msa0556560:intron | 30.0% | |
| ! | CTAGAAGTAACTACCAATTT+TGG | + | chr4_1:54827917-54827936 | Msa0556560:intron | 30.0% |
| ACAACACTGTTAAATGAGTT+TGG | + | chr4_1:54827975-54827994 | Msa0556560:intron | 30.0% | |
| AAAAGATAGTTCATGAGTTG+AGG | + | chr4_1:54828009-54828028 | Msa0556560:intron | 30.0% | |
| ! | AAAGATAGTTCATGAGTTGA+GGG | + | chr4_1:54828010-54828029 | Msa0556560:intron | 30.0% |
| !! | TATGGGTATTGAAGTTGTAT+TGG | - | chr4_1:54828096-54828115 | None:intergenic | 30.0% |
| ATTGGATGTATATATGTGGT+TGG | - | chr4_1:54828128-54828147 | None:intergenic | 30.0% | |
| CCATATTGGATGTATATATG+TGG | - | chr4_1:54828132-54828151 | None:intergenic | 30.0% | |
| CCACATATATACATCCAATA+TGG | + | chr4_1:54828129-54828148 | Msa0556560:intron | 30.0% | |
| ACTCTTCATAAACTCATTTC+AGG | - | chr4_1:54828440-54828459 | None:intergenic | 30.0% | |
| TGAAATGAGTTTATGAAGAG+TGG | + | chr4_1:54828439-54828458 | Msa0556560:intron | 30.0% | |
| GGGCAAATTTATACAGAAAA+AGG | - | chr4_1:54828588-54828607 | None:intergenic | 30.0% | |
| TATGGATAATAGCGAAAAGA+AGG | - | chr4_1:54828803-54828822 | None:intergenic | 30.0% | |
| ACTAAAGTTAGCAATAGTCA+GGG | - | chr4_1:54828864-54828883 | None:intergenic | 30.0% | |
| AACTAAAGTTAGCAATAGTC+AGG | - | chr4_1:54828865-54828884 | None:intergenic | 30.0% | |
| ! | ATTGAGGATGATAATGATGA+TGG | + | chr4_1:54829100-54829119 | Msa0556560:CDS | 30.0% |
| !!! | AAAGTTTGTTTTGCTTTTGC+AGG | + | chr4_1:54829326-54829345 | Msa0556560:intron | 30.0% |
| TACTTTCACTTACTCTTGAA+TGG | + | chr4_1:54829571-54829590 | Msa0556560:intron | 30.0% | |
| TGACAAACAGTAAACAAGAA+AGG | - | chr4_1:54829633-54829652 | None:intergenic | 30.0% | |
| ! | TTTACTGTTTGTCATGCTTT+TGG | + | chr4_1:54829639-54829658 | Msa0556560:intron | 30.0% |
| TCAGAATAGAGAGCAAATAC+CGG | - | chr4_1:54821958-54821977 | None:intergenic | 35.0% | |
| AGTACTATTCAAGATTTCGC+CGG | + | chr4_1:54821981-54822000 | Msa0556560:five_prime_UTR | 35.0% | |
| TAATACAGAATGGCGAAGAA+AGG | + | chr4_1:54822013-54822032 | Msa0556560:exon | 35.0% | |
| ! | TAACTTTTCCACTGAAGACA+TGG | + | chr4_1:54822099-54822118 | Msa0556560:CDS | 35.0% |
| GAATCAGCATTAATGTCAAG+TGG | - | chr4_1:54822261-54822280 | None:intergenic | 35.0% | |
| ! | GCTTTTCCTTCAACTTTGTT+TGG | + | chr4_1:54822380-54822399 | Msa0556560:intron | 35.0% |
| ! | TGATAATGATGACACTGATG+AGG | + | chr4_1:54822441-54822460 | Msa0556560:CDS | 35.0% |
| ATACAAAAAGACCCAAGCAT+TGG | + | chr4_1:54822641-54822660 | Msa0556560:intron | 35.0% | |
| AATTTCTTCCTCTTCCTTTG+GGG | - | chr4_1:54823127-54823146 | None:intergenic | 35.0% | |
| CAATTTCTTCCTCTTCCTTT+GGG | - | chr4_1:54823128-54823147 | None:intergenic | 35.0% | |
| AATGTTATGTTGCCTAAGCA+TGG | + | chr4_1:54823261-54823280 | Msa0556560:intron | 35.0% | |
| !! | ATGGATGAAAAAGTGCTTAC+GGG | + | chr4_1:54823299-54823318 | Msa0556560:intron | 35.0% |
| AGCAAATGAACGTTCTGTAT+AGG | + | chr4_1:54823428-54823447 | Msa0556560:CDS | 35.0% | |
| TATATATCAATGGCAGGATG+AGG | - | chr4_1:54823467-54823486 | None:intergenic | 35.0% | |
| ATGGATGCAATGTCATTATC+TGG | - | chr4_1:54823534-54823553 | None:intergenic | 35.0% | |
| !! | TTGAATTTTAGAGGAGCGAA+TGG | + | chr4_1:54823667-54823686 | Msa0556560:intron | 35.0% |
| !! | AGATTACCTTCTGAAACCAT+TGG | + | chr4_1:54823751-54823770 | Msa0556560:intron | 35.0% |
| TATTCACCAATGGTTTCAGA+AGG | - | chr4_1:54823760-54823779 | None:intergenic | 35.0% | |
| CAATAGCTGAGATTTCTACT+GGG | - | chr4_1:54823986-54824005 | None:intergenic | 35.0% | |
| CTGCACATGTAAAATCATCA+AGG | - | chr4_1:54824009-54824028 | None:intergenic | 35.0% | |
| TGGCATATCAGACATCTAAA+AGG | - | chr4_1:54824172-54824191 | None:intergenic | 35.0% | |
| GTGTTGAATCCTGACAAAAT+TGG | + | chr4_1:54824358-54824377 | Msa0556560:intron | 35.0% | |
| AATCCTGACAAAATTGGATC+AGG | + | chr4_1:54824364-54824383 | Msa0556560:intron | 35.0% | |
| AAGGCCATAACAGCAATAAA+GGG | - | chr4_1:54824392-54824411 | None:intergenic | 35.0% | |
| TAAGGCCATAACAGCAATAA+AGG | - | chr4_1:54824393-54824412 | None:intergenic | 35.0% | |
| ! | AAGAAGAGGGTGTATATGTA+AGG | - | chr4_1:54824411-54824430 | None:intergenic | 35.0% |
| CAACCAATCAACTAATTCTG+GGG | - | chr4_1:54824548-54824567 | None:intergenic | 35.0% | |
| GACAACCAATCAACTAATTC+TGG | - | chr4_1:54824550-54824569 | None:intergenic | 35.0% | |
| TTGGTTGTCAGAATTAAACG+AGG | + | chr4_1:54824561-54824580 | Msa0556560:CDS | 35.0% | |
| GGAACTACTCATGGAAAAAA+TGG | - | chr4_1:54824668-54824687 | None:intergenic | 35.0% | |
| !!! | CATAGTTTTGGAACTACTCA+TGG | - | chr4_1:54824677-54824696 | None:intergenic | 35.0% |
| AGTTCCAAAACTATGTGAAG+AGG | + | chr4_1:54824682-54824701 | Msa0556560:intron | 35.0% | |
| ! | TCAACCTCTTCACATAGTTT+TGG | - | chr4_1:54824689-54824708 | None:intergenic | 35.0% |
| ACAATGAGCATGCTTTCATT+AGG | - | chr4_1:54824810-54824829 | None:intergenic | 35.0% | |
| ! | TCATTGTGAATGACTTGGAA+TGG | + | chr4_1:54824823-54824842 | Msa0556560:intron | 35.0% |
| TATTCTGTTTACCGAGACAT+TGG | + | chr4_1:54825017-54825036 | Msa0556560:intron | 35.0% | |
| ATTCTGTTTACCGAGACATT+GGG | + | chr4_1:54825018-54825037 | Msa0556560:intron | 35.0% | |
| CTCTTGTGAAGGTTAAAAAG+GGG | + | chr4_1:54825251-54825270 | Msa0556560:intron | 35.0% | |
| TCTTGTGAAGGTTAAAAAGG+GGG | + | chr4_1:54825252-54825271 | Msa0556560:intron | 35.0% | |
| AGAATTCGGCTAAGATATTG+CGG | - | chr4_1:54825554-54825573 | None:intergenic | 35.0% | |
| TTGTCAAACAATGGCTATAG+TGG | + | chr4_1:54825617-54825636 | Msa0556560:intron | 35.0% | |
| CATTGTGTTAAAAACCAGAC+CGG | + | chr4_1:54825649-54825668 | Msa0556560:intron | 35.0% | |
| GGTCAAGGCATATAAAATCT+GGG | - | chr4_1:54825836-54825855 | None:intergenic | 35.0% | |
| TGGTCAAGGCATATAAAATC+TGG | - | chr4_1:54825837-54825856 | None:intergenic | 35.0% | |
| AAAAATGTAGACGGTCATCA+GGG | - | chr4_1:54825879-54825898 | None:intergenic | 35.0% | |
| AAAAAATGTAGACGGTCATC+AGG | - | chr4_1:54825880-54825899 | None:intergenic | 35.0% | |
| GAGAGAAGCAATAAAGGTTT+GGG | - | chr4_1:54825969-54825988 | None:intergenic | 35.0% | |
| AGAGAGAAGCAATAAAGGTT+TGG | - | chr4_1:54825970-54825989 | None:intergenic | 35.0% | |
| ACTGATATCACTGTAAATCG+GGG | - | chr4_1:54826020-54826039 | None:intergenic | 35.0% | |
| GTTGACGGTTATACTTCAAT+CGG | + | chr4_1:54826111-54826130 | Msa0556560:intron | 35.0% | |
| ! | TGATGACGACGATATTAAAC+TGG | - | chr4_1:54826144-54826163 | None:intergenic | 35.0% |
| !!! | AGGTCCTGGTTTTAAAACAA+GGG | + | chr4_1:54826217-54826236 | Msa0556560:intron | 35.0% |
| !!! | ATAGCCCTTGTTTTAAAACC+AGG | - | chr4_1:54826224-54826243 | None:intergenic | 35.0% |
| GCCGAAGACTTCAAATAAAA+TGG | - | chr4_1:54826459-54826478 | None:intergenic | 35.0% | |
| TCTTCGGCTTTCTTGTATTA+TGG | + | chr4_1:54826471-54826490 | Msa0556560:intron | 35.0% | |
| ! | TTACAGTATTATTGCCGGTT+TGG | + | chr4_1:54826556-54826575 | Msa0556560:intron | 35.0% |
| GGAAATGCCTATGCTTATAT+TGG | + | chr4_1:54826619-54826638 | Msa0556560:intron | 35.0% | |
| AATTAACTGTTGAGGACTTG+TGG | - | chr4_1:54827107-54827126 | None:intergenic | 35.0% | |
| TTCATCTCAACTACATTGCT+AGG | - | chr4_1:54827147-54827166 | None:intergenic | 35.0% | |
| AGGAAGAAAAGCAAAAGATC+AGG | + | chr4_1:54827200-54827219 | Msa0556560:CDS | 35.0% | |
| TTAACTGTTGCACCTTAACA+TGG | + | chr4_1:54827292-54827311 | Msa0556560:intron | 35.0% | |
| !! | GAACGCTTTTGAGAATTACT+AGG | - | chr4_1:54827423-54827442 | None:intergenic | 35.0% |
| AATCATCATATGTTGCAAGC+TGG | - | chr4_1:54827544-54827563 | None:intergenic | 35.0% | |
| !!! | TGATGATTTTGATGATGCTG+TGG | + | chr4_1:54827556-54827575 | Msa0556560:CDS | 35.0% |
| ATGATGCTGTGGTTGTTAAT+GGG | + | chr4_1:54827567-54827586 | Msa0556560:CDS | 35.0% | |
| TGCTAATCTGAAGAAACTCA+AGG | + | chr4_1:54827631-54827650 | Msa0556560:CDS | 35.0% | |
| TCAAAAAATGTCATTGGGAC+GGG | + | chr4_1:54827761-54827780 | Msa0556560:intron | 35.0% | |
| GACAAGAGACTAATATCCTA+GGG | - | chr4_1:54827813-54827832 | None:intergenic | 35.0% | |
| AGACAAGAGACTAATATCCT+AGG | - | chr4_1:54827814-54827833 | None:intergenic | 35.0% | |
| AGATAACATGCAGTAAAAGC+AGG | - | chr4_1:54827874-54827893 | None:intergenic | 35.0% | |
| CATTGTTAAGGTTCCCATAT+TGG | - | chr4_1:54828146-54828165 | None:intergenic | 35.0% | |
| ATATGGGAACCTTAACAATG+TGG | + | chr4_1:54828146-54828165 | Msa0556560:intron | 35.0% | |
| TATGGGAACCTTAACAATGT+GGG | + | chr4_1:54828147-54828166 | Msa0556560:intron | 35.0% | |
| TGGTATCAGAGTCAGATTAA+GGG | - | chr4_1:54828241-54828260 | None:intergenic | 35.0% | |
| AACAACCACACAAGTGTTTA+AGG | - | chr4_1:54828285-54828304 | None:intergenic | 35.0% | |
| !! | TCAGTTTCTAGGAAGCATTA+TGG | - | chr4_1:54828821-54828840 | None:intergenic | 35.0% |
| ATAATGCTTCCTAGAAACTG+AGG | + | chr4_1:54828820-54828839 | Msa0556560:intron | 35.0% | |
| ACCTTAACACAAAAAGGGAT+CGG | - | chr4_1:54828986-54829005 | None:intergenic | 35.0% | |
| AAGCCACCTTAACACAAAAA+GGG | - | chr4_1:54828991-54829010 | None:intergenic | 35.0% | |
| !! | TGATGATGGTGATGATCAAA+TGG | + | chr4_1:54829114-54829133 | Msa0556560:CDS | 35.0% |
| ATGAAGAGGACATTGAAAGT+GGG | + | chr4_1:54829155-54829174 | Msa0556560:CDS | 35.0% | |
| ! | ACCTCTTCAAGGTGAAATTT+TGG | + | chr4_1:54829259-54829278 | Msa0556560:intron | 35.0% |
| TCCAAAATTTCACCTTGAAG+AGG | - | chr4_1:54829263-54829282 | None:intergenic | 35.0% | |
| GAATCCTAGAAAGAACTACA+AGG | + | chr4_1:54829548-54829567 | Msa0556560:CDS | 35.0% | |
| AGTACCTTGTAGTTCTTTCT+AGG | - | chr4_1:54829555-54829574 | None:intergenic | 35.0% | |
| GATAGTTGCATTAATTCCAG+TGG | - | chr4_1:54829759-54829778 | None:intergenic | 35.0% | |
| GATTGGAAACTGAACATCTT+TGG | + | chr4_1:54829904-54829923 | Msa0556560:three_prime_UTR | 35.0% | |
| AAAAGTTATAACGGTCGCGT+CGG | - | chr4_1:54822087-54822106 | None:intergenic | 40.0% | |
| ATTCGCAGTTCATAAGCAGA+GGG | + | chr4_1:54822227-54822246 | Msa0556560:intron | 40.0% | |
| AATGATGACACTGATGAGGA+TGG | + | chr4_1:54822445-54822464 | Msa0556560:CDS | 40.0% | |
| GACGAGGATGATGAATATGA+TGG | + | chr4_1:54822490-54822509 | Msa0556560:CDS | 40.0% | |
| GGATGATGAATATGATGGCA+AGG | + | chr4_1:54822495-54822514 | Msa0556560:CDS | 40.0% | |
| TGAATATGATGGCAAGGAGA+AGG | + | chr4_1:54822501-54822520 | Msa0556560:CDS | 40.0% | |
| GAATATGATGGCAAGGAGAA+GGG | + | chr4_1:54822502-54822521 | Msa0556560:CDS | 40.0% | |
| ! | GCTTGGGTCTTTTTGTATCT+CGG | - | chr4_1:54822639-54822658 | None:intergenic | 40.0% |
| TGCATGTATAAGCTGGGTTT+AGG | + | chr4_1:54822714-54822733 | Msa0556560:intron | 40.0% | |
| GCATGTATAAGCTGGGTTTA+GGG | + | chr4_1:54822715-54822734 | Msa0556560:intron | 40.0% | |
| ! | TATTTGAAGTCGTTGCATGG+TGG | + | chr4_1:54822858-54822877 | Msa0556560:CDS | 40.0% |
| CAAGATGAAGAAGACGATGA+AGG | + | chr4_1:54822897-54822916 | Msa0556560:CDS | 40.0% | |
| TACGATTATCAGCACCATGT+CGG | - | chr4_1:54822953-54822972 | None:intergenic | 40.0% | |
| GCAATTTCTTCCTCTTCCTT+TGG | - | chr4_1:54823129-54823148 | None:intergenic | 40.0% | |
| !! | AGAGGAAGATTTTGACCTTG+TGG | + | chr4_1:54823185-54823204 | Msa0556560:CDS | 40.0% |
| CATTATCTTCGTCTTCCACA+AGG | - | chr4_1:54823203-54823222 | None:intergenic | 40.0% | |
| TTATGTTGCCTAAGCATGGT+CGG | + | chr4_1:54823265-54823284 | Msa0556560:intron | 40.0% | |
| ! | ATGGTCGGTTTCCACATTAA+TGG | + | chr4_1:54823280-54823299 | Msa0556560:intron | 40.0% |
| !! | TGGATGAAAAAGTGCTTACG+GGG | + | chr4_1:54823300-54823319 | Msa0556560:intron | 40.0% |
| !! | AATTTTAGAGGAGCGAATGG+AGG | + | chr4_1:54823670-54823689 | Msa0556560:intron | 40.0% |
| !! | TGGAGGAAATTTGGTGTTCA+CGG | + | chr4_1:54823687-54823706 | Msa0556560:intron | 40.0% |
| !! | AATCTTGACTAGTCTTCCCT+TGG | - | chr4_1:54823736-54823755 | None:intergenic | 40.0% |
| !! | TGGGCCTTTTCATCTAAAGT+AGG | - | chr4_1:54823924-54823943 | None:intergenic | 40.0% |
| AGATGAAAAGGCCCAATTTG+AGG | + | chr4_1:54823929-54823948 | Msa0556560:intron | 40.0% | |
| GATGAAAAGGCCCAATTTGA+GGG | + | chr4_1:54823930-54823949 | Msa0556560:intron | 40.0% | |
| GCAATAGCTGAGATTTCTAC+TGG | - | chr4_1:54823987-54824006 | None:intergenic | 40.0% | |
| AGCAATATTCAGCAGAGATG+TGG | + | chr4_1:54824312-54824331 | Msa0556560:intron | 40.0% | |
| AGTGACTATCTTCTCTTTGC+AGG | + | chr4_1:54824518-54824537 | Msa0556560:intron | 40.0% | |
| TACTCATGGAAAAAATGGGC+AGG | - | chr4_1:54824663-54824682 | None:intergenic | 40.0% | |
| CATGCTTTCATTAGGTTACG+TGG | - | chr4_1:54824802-54824821 | None:intergenic | 40.0% | |
| CATGCTCATTGTGAATGACT+TGG | + | chr4_1:54824818-54824837 | Msa0556560:intron | 40.0% | |
| AATGGCATATTGCCGGAAAA+TGG | + | chr4_1:54824841-54824860 | Msa0556560:intron | 40.0% | |
| ATATTGCCGGAAAATGGTTC+CGG | + | chr4_1:54824847-54824866 | Msa0556560:intron | 40.0% | |
| GAGACGCAAAAAATGAAAGG+AGG | - | chr4_1:54824972-54824991 | None:intergenic | 40.0% | |
| TTCTGTTTACCGAGACATTG+GGG | + | chr4_1:54825019-54825038 | Msa0556560:intron | 40.0% | |
| AAGGGGGAAATAGTTATGGA+AGG | + | chr4_1:54825268-54825287 | Msa0556560:CDS | 40.0% | |
| GAAGGTTATAGCTTGGCAAT+AGG | - | chr4_1:54825335-54825354 | None:intergenic | 40.0% | |
| GAAGGTAGAAGGTTATAGCT+TGG | - | chr4_1:54825342-54825361 | None:intergenic | 40.0% | |
| ! | GCTAGCATCTGTTACTTGTA+AGG | + | chr4_1:54825461-54825480 | Msa0556560:intron | 40.0% |
| ! | TTCAACCCAATCAAAGCACT+GGG | + | chr4_1:54825674-54825693 | Msa0556560:intron | 40.0% |
| GAAGATGACAACACACTGTT+TGG | - | chr4_1:54825857-54825876 | None:intergenic | 40.0% | |
| AAGCGAGAGAGAAGCAATAA+AGG | - | chr4_1:54825975-54825994 | None:intergenic | 40.0% | |
| CTGATATCACTGTAAATCGG+GGG | - | chr4_1:54826019-54826038 | None:intergenic | 40.0% | |
| !!! | TTTTAGCTTCAGTAGCAACC+TGG | + | chr4_1:54826088-54826107 | Msa0556560:intron | 40.0% |
| ! | TTTAGCTTCAGTAGCAACCT+GGG | + | chr4_1:54826089-54826108 | Msa0556560:intron | 40.0% |
| !!! | CAGGTCCTGGTTTTAAAACA+AGG | + | chr4_1:54826216-54826235 | Msa0556560:intron | 40.0% |
| TCGTAAATACAGGACCAAAC+CGG | - | chr4_1:54826573-54826592 | None:intergenic | 40.0% | |
| !! | GTTGTTTTGTCTGTTGAGTG+AGG | - | chr4_1:54826857-54826876 | None:intergenic | 40.0% |
| TGAACTTCCAGTTGAACTTG+AGG | + | chr4_1:54826884-54826903 | Msa0556560:CDS | 40.0% | |
| AGAATGTCCTCAAGTTCAAC+TGG | - | chr4_1:54826894-54826913 | None:intergenic | 40.0% | |
| ! | TTTAAAGCGATAGAATCGGC+TGG | - | chr4_1:54826975-54826994 | None:intergenic | 40.0% |
| TTTAAACGAAGAACAGCCTC+TGG | + | chr4_1:54826989-54827008 | Msa0556560:CDS | 40.0% | |
| AAAAGTTAGAGCTTCCCTTG+AGG | + | chr4_1:54827353-54827372 | Msa0556560:CDS | 40.0% | |
| GCAGATGTTGGAAACAAGAA+AGG | - | chr4_1:54827489-54827508 | None:intergenic | 40.0% | |
| GTCAGTAAGTTTGCAGATGT+TGG | - | chr4_1:54827501-54827520 | None:intergenic | 40.0% | |
| GATGATGCTGTGGTTGTTAA+TGG | + | chr4_1:54827566-54827585 | Msa0556560:CDS | 40.0% | |
| AGCAAACGGTGAAACTTTAC+TGG | - | chr4_1:54827609-54827628 | None:intergenic | 40.0% | |
| GTAAAAGCAGGACTTCATGT+TGG | - | chr4_1:54827862-54827881 | None:intergenic | 40.0% | |
| GTGTTAAGTGTTTGTCTGGT+TGG | - | chr4_1:54828039-54828058 | None:intergenic | 40.0% | |
| !! | GGAAGTGTTAAGTGTTTGTC+TGG | - | chr4_1:54828043-54828062 | None:intergenic | 40.0% |
| TCCCACATTGATAAGGTTTC+CGG | - | chr4_1:54828071-54828090 | None:intergenic | 40.0% | |
| ATTGGAGTCCCACATTGATA+AGG | - | chr4_1:54828078-54828097 | None:intergenic | 40.0% | |
| ACAACTTCAATACCCATACG+AGG | + | chr4_1:54828098-54828117 | Msa0556560:intron | 40.0% | |
| CAACTTCAATACCCATACGA+GGG | + | chr4_1:54828099-54828118 | Msa0556560:intron | 40.0% | |
| AATGAGGTCCCACATTGTTA+AGG | - | chr4_1:54828158-54828177 | None:intergenic | 40.0% | |
| !! | CGGGTATTGAATTCGTAATG+AGG | - | chr4_1:54828174-54828193 | None:intergenic | 40.0% |
| AAAATCCACGCTAAGTGTGT+AGG | - | chr4_1:54828197-54828216 | None:intergenic | 40.0% | |
| AGATTAAGGGTAGCAATGTG+GGG | - | chr4_1:54828228-54828247 | None:intergenic | 40.0% | |
| CAGATTAAGGGTAGCAATGT+GGG | - | chr4_1:54828229-54828248 | None:intergenic | 40.0% | |
| TCAGATTAAGGGTAGCAATG+TGG | - | chr4_1:54828230-54828249 | None:intergenic | 40.0% | |
| GTGGTATCAGAGTCAGATTA+AGG | - | chr4_1:54828242-54828261 | None:intergenic | 40.0% | |
| TCTTTGTCCAATGTTACCGT+TGG | + | chr4_1:54828304-54828323 | Msa0556560:intron | 40.0% | |
| TGTTCTCATGTTGATGCCAA+CGG | - | chr4_1:54828323-54828342 | None:intergenic | 40.0% | |
| GAGGGAGGATATAACTTACT+CGG | + | chr4_1:54828370-54828389 | Msa0556560:intron | 40.0% | |
| TAATTCAACCCTTACCACGT+CGG | - | chr4_1:54828483-54828502 | None:intergenic | 40.0% | |
| TAGTCAGGGTAATAGTTCAG+TGG | - | chr4_1:54828850-54828869 | None:intergenic | 40.0% | |
| ! | TCCGATCCCTTTTTGTGTTA+AGG | + | chr4_1:54828982-54829001 | Msa0556560:intron | 40.0% |
| ! | GATCCCTTTTTGTGTTAAGG+TGG | + | chr4_1:54828985-54829004 | Msa0556560:intron | 40.0% |
| GAAGCCACCTTAACACAAAA+AGG | - | chr4_1:54828992-54829011 | None:intergenic | 40.0% | |
| ! | TTTTGTGTTAAGGTGGCTTC+TGG | + | chr4_1:54828992-54829011 | Msa0556560:intron | 40.0% |
| TCAATGTCCTCTTCATCATG+AGG | - | chr4_1:54829151-54829170 | None:intergenic | 40.0% | |
| GATGAAGAGGACATTGAAAG+TGG | + | chr4_1:54829154-54829173 | Msa0556560:CDS | 40.0% | |
| TGAAGAGGACATTGAAAGTG+GGG | + | chr4_1:54829156-54829175 | Msa0556560:CDS | 40.0% | |
| ATGGAAATATCCCAGGCAAA+CGG | - | chr4_1:54829288-54829307 | None:intergenic | 40.0% | |
| GAAGAAGATGGAAATATCCC+AGG | - | chr4_1:54829295-54829314 | None:intergenic | 40.0% | |
| ! | AAAGCGCTATATCACTTCTC+AGG | + | chr4_1:54829390-54829409 | Msa0556560:CDS | 40.0% |
| GGTTCTTACTTGATCTCATC+AGG | + | chr4_1:54829411-54829430 | Msa0556560:intron | 40.0% | |
| AAAAGCCGTTAAGAATCGCA+AGG | + | chr4_1:54829685-54829704 | Msa0556560:CDS | 40.0% | |
| AAAGCCGTTAAGAATCGCAA+GGG | + | chr4_1:54829686-54829705 | Msa0556560:CDS | 40.0% | |
| ! | TCAGTCGAAGTATCAGATTC+AGG | + | chr4_1:54829777-54829796 | Msa0556560:CDS | 40.0% |
| GTGATGAGGTTCAAAATTGG+TGG | - | chr4_1:54829850-54829869 | None:intergenic | 40.0% | |
| CAGGTGATGAGGTTCAAAAT+TGG | - | chr4_1:54829853-54829872 | None:intergenic | 40.0% | |
| CAGAGGAATGCAACGTAAGA+CGG | - | chr4_1:54821904-54821923 | None:intergenic | 45.0% | |
| GAAAGTGAGAAGTAACGCAG+AGG | - | chr4_1:54821921-54821940 | None:intergenic | 45.0% | |
| CTTTCGTCTTCTTCAACCTC+CGG | + | chr4_1:54821936-54821955 | Msa0556560:five_prime_UTR | 45.0% | |
| GAATAGAGAGCAAATACCGG+AGG | - | chr4_1:54821955-54821974 | None:intergenic | 45.0% | |
| TACAGAATGGCGAAGAAAGG+AGG | + | chr4_1:54822016-54822035 | Msa0556560:exon | 45.0% | |
| AAAGTTATAACGGTCGCGTC+GGG | - | chr4_1:54822086-54822105 | None:intergenic | 45.0% | |
| GATTCGCAGTTCATAAGCAG+AGG | + | chr4_1:54822226-54822245 | Msa0556560:intron | 45.0% | |
| ! | GGGTCTTTTTGTATCTCGGA+GGG | - | chr4_1:54822635-54822654 | None:intergenic | 45.0% |
| ! | TGGGTCTTTTTGTATCTCGG+AGG | - | chr4_1:54822636-54822655 | None:intergenic | 45.0% |
| ACAGAACACTGCCAATGCTT+GGG | - | chr4_1:54822655-54822674 | None:intergenic | 45.0% | |
| AACAGAACACTGCCAATGCT+TGG | - | chr4_1:54822656-54822675 | None:intergenic | 45.0% | |
| ! | TTGCATGGTGGAGATGAAGA+CGG | + | chr4_1:54822870-54822889 | Msa0556560:CDS | 45.0% |
| ! | GCTACAATCAAGTGATGACG+AGG | + | chr4_1:54823101-54823120 | Msa0556560:intron | 45.0% |
| GGATCTGAGTGCTTTGTCAA+AGG | + | chr4_1:54823402-54823421 | Msa0556560:CDS | 45.0% | |
| TCTGAGTGCTTTGTCAAAGG+AGG | + | chr4_1:54823405-54823424 | Msa0556560:CDS | 45.0% | |
| AGGAGCGAATGGAGGAAATT+TGG | + | chr4_1:54823678-54823697 | Msa0556560:intron | 45.0% | |
| !! | GGAGGAAATTTGGTGTTCAC+GGG | + | chr4_1:54823688-54823707 | Msa0556560:intron | 45.0% |
| !! | GAGGAAATTTGGTGTTCACG+GGG | + | chr4_1:54823689-54823708 | Msa0556560:intron | 45.0% |
| !! | AGATTTCTACTGGGTTGGTC+AGG | - | chr4_1:54823977-54823996 | None:intergenic | 45.0% |
| AGCTGAGATTTCTACTGGGT+TGG | - | chr4_1:54823982-54824001 | None:intergenic | 45.0% | |
| ! | TGCTGATTGCCATTGCTTTG+AGG | + | chr4_1:54824054-54824073 | Msa0556560:intron | 45.0% |
| CATCGTGACTATCTTGGCAA+TGG | - | chr4_1:54824192-54824211 | None:intergenic | 45.0% | |
| TCCTAGCATCGTGACTATCT+TGG | - | chr4_1:54824198-54824217 | None:intergenic | 45.0% | |
| CTGCCCCAGAATTAGTTGAT+TGG | + | chr4_1:54824542-54824561 | Msa0556560:CDS | 45.0% | |
| GACTTGGAATGGCATATTGC+CGG | + | chr4_1:54824834-54824853 | Msa0556560:intron | 45.0% | |
| TATTGCCGGAAAATGGTTCC+GGG | + | chr4_1:54824848-54824867 | Msa0556560:intron | 45.0% | |
| GGGGAAATAGTTATGGAAGG+AGG | + | chr4_1:54825271-54825290 | Msa0556560:CDS | 45.0% | |
| GGACTTGAGTAGAAGGTAGA+AGG | - | chr4_1:54825353-54825372 | None:intergenic | 45.0% | |
| TACCTTCTACTCAAGTCCGA+AGG | + | chr4_1:54825355-54825374 | Msa0556560:CDS | 45.0% | |
| ACCTTCTACTCAAGTCCGAA+GGG | + | chr4_1:54825356-54825375 | Msa0556560:CDS | 45.0% | |
| TCTTCAAGGCGAGCTATTAC+AGG | - | chr4_1:54825400-54825419 | None:intergenic | 45.0% | |
| !! | CAGTGCTTTGATTGGGTTGA+AGG | - | chr4_1:54825675-54825694 | None:intergenic | 45.0% |
| CTTCAACCCAATCAAAGCAC+TGG | + | chr4_1:54825673-54825692 | Msa0556560:intron | 45.0% | |
| GCTAACCCAGTGCTTTGATT+GGG | - | chr4_1:54825682-54825701 | None:intergenic | 45.0% | |
| !! | CAATCAAAGCACTGGGTTAG+CGG | + | chr4_1:54825681-54825700 | Msa0556560:intron | 45.0% |
| GACAACACACTGTTTGGTCA+AGG | - | chr4_1:54825851-54825870 | None:intergenic | 45.0% | |
| ATATCACTGTAAATCGGGGG+TGG | - | chr4_1:54826016-54826035 | None:intergenic | 45.0% | |
| TGAAGTATAACCGTCAACCC+AGG | - | chr4_1:54826109-54826128 | None:intergenic | 45.0% | |
| TATCGTCGTCATCACCAGTT+TGG | + | chr4_1:54826150-54826169 | Msa0556560:intron | 45.0% | |
| GATCAGCTATGCATCCAAAC+TGG | - | chr4_1:54826167-54826186 | None:intergenic | 45.0% | |
| GTAAGCAAGGCTACCAATGT+AGG | - | chr4_1:54826668-54826687 | None:intergenic | 45.0% | |
| ! | TGGTAGCCTTGCTTACACTA+TGG | + | chr4_1:54826672-54826691 | Msa0556560:intron | 45.0% |
| ! | TAGCCTTGCTTACACTATGG+AGG | + | chr4_1:54826675-54826694 | Msa0556560:intron | 45.0% |
| AGTCCTCCATAGTGTAAGCA+AGG | - | chr4_1:54826681-54826700 | None:intergenic | 45.0% | |
| TGAATCACCAGAAGAAGCAG+TGG | + | chr4_1:54827019-54827038 | Msa0556560:CDS | 45.0% | |
| ATCACTACCACTGCTTCTTC+TGG | - | chr4_1:54827029-54827048 | None:intergenic | 45.0% | |
| TTGCACCTTAACATGGCAGA+AGG | + | chr4_1:54827299-54827318 | Msa0556560:intron | 45.0% | |
| GTGATCCTTCTGCCATGTTA+AGG | - | chr4_1:54827307-54827326 | None:intergenic | 45.0% | |
| ACATGGCAGAAGGATCACAT+TGG | + | chr4_1:54827309-54827328 | Msa0556560:intron | 45.0% | |
| GTGAAGCTATACCCATTAGC+TGG | - | chr4_1:54827450-54827469 | None:intergenic | 45.0% | |
| ! | TCGGTGTTTGATTGTACCCT+AGG | + | chr4_1:54827794-54827813 | Msa0556560:intron | 45.0% |
| !! | GGACTTCATGTTGGTTTCTC+AGG | - | chr4_1:54827853-54827872 | None:intergenic | 45.0% |
| ACATTGATAAGGTTTCCGGC+AGG | - | chr4_1:54828067-54828086 | None:intergenic | 45.0% | |
| TGCCGGAAACCTTATCAATG+TGG | + | chr4_1:54828066-54828085 | Msa0556560:intron | 45.0% | |
| GCCGGAAACCTTATCAATGT+GGG | + | chr4_1:54828067-54828086 | Msa0556560:intron | 45.0% | |
| TCTGACTCTGATACCACTGT+TGG | + | chr4_1:54828245-54828264 | Msa0556560:intron | 45.0% | |
| CTGACTCTGATACCACTGTT+GGG | + | chr4_1:54828246-54828265 | Msa0556560:intron | 45.0% | |
| GTTGATGCCAACGGTAACAT+TGG | - | chr4_1:54828314-54828333 | None:intergenic | 45.0% | |
| AACAACGTAGTGAAGAGCAG+TGG | + | chr4_1:54828339-54828358 | Msa0556560:intron | 45.0% | |
| ACAACGTAGTGAAGAGCAGT+GGG | + | chr4_1:54828340-54828359 | Msa0556560:intron | 45.0% | |
| ACTTACTCGGTTGTTGAGCT+AGG | + | chr4_1:54828383-54828402 | Msa0556560:intron | 45.0% | |
| GACGTGGTAAGGGTTGAATT+AGG | + | chr4_1:54828482-54828501 | Msa0556560:intron | 45.0% | |
| TCACGAATAGCGTCTCTCTT+AGG | - | chr4_1:54829031-54829050 | None:intergenic | 45.0% | |
| GACGGAAAAGACATGAGAAG+CGG | + | chr4_1:54829053-54829072 | Msa0556560:CDS | 45.0% | |
| ACGGAAAAGACATGAGAAGC+GGG | + | chr4_1:54829054-54829073 | Msa0556560:CDS | 45.0% | |
| CCTCTTCATCATGAGGTACA+AGG | - | chr4_1:54829144-54829163 | None:intergenic | 45.0% | |
| CCTTGTACCTCATGATGAAG+AGG | + | chr4_1:54829141-54829160 | Msa0556560:CDS | 45.0% | |
| GAAGAGGACATTGAAAGTGG+GGG | + | chr4_1:54829157-54829176 | Msa0556560:CDS | 45.0% | |
| TGACCTACTCAACCTCTTCA+AGG | + | chr4_1:54829248-54829267 | Msa0556560:CDS | 45.0% | |
| TCACCTTGAAGAGGTTGAGT+AGG | - | chr4_1:54829254-54829273 | None:intergenic | 45.0% | |
| !! | AATTTTGGATGCCGTTTGCC+TGG | + | chr4_1:54829274-54829293 | Msa0556560:intron | 45.0% |
| !! | ATTTTGGATGCCGTTTGCCT+GGG | + | chr4_1:54829275-54829294 | Msa0556560:intron | 45.0% |
| ACAGTCTCCTCTGGCAAAAA+GGG | - | chr4_1:54829364-54829383 | None:intergenic | 45.0% | |
| CTTCGACATCTACAGCACAT+TGG | - | chr4_1:54829490-54829509 | None:intergenic | 45.0% | |
| CTGTAGATGTCGAAGAACAG+AGG | + | chr4_1:54829495-54829514 | Msa0556560:intron | 45.0% | |
| ACTAACTCGTAGTCGCAACA+AGG | + | chr4_1:54829518-54829537 | Msa0556560:CDS | 45.0% | |
| CTGTCCCTTGCGATTCTTAA+CGG | - | chr4_1:54829693-54829712 | None:intergenic | 45.0% | |
| ! | GACAGGTTCAGAGTATCAGA+AGG | + | chr4_1:54829708-54829727 | Msa0556560:CDS | 45.0% |
| AGAAGGCCAAATGCACCTTA+TGG | + | chr4_1:54829725-54829744 | Msa0556560:CDS | 45.0% | |
| AACCTCATCACCTGCTTAGA+TGG | + | chr4_1:54829859-54829878 | Msa0556560:three_prime_UTR | 45.0% | |
| ACCTCATCACCTGCTTAGAT+GGG | + | chr4_1:54829860-54829879 | Msa0556560:three_prime_UTR | 45.0% | |
| !! | ACTGGTTCGGGTCAAAAACC+TGG | + | chr4_1:54821796-54821815 | Msa0556560:five_prime_UTR | 50.0% |
| TAACTAGGTTGCTGTGTGCG+AGG | - | chr4_1:54821837-54821856 | None:intergenic | 50.0% | |
| !! | GCAGTTGGGAGGGGTATTTA+GGG | - | chr4_1:54821877-54821896 | None:intergenic | 50.0% |
| AGGAATGCAACGTAAGACGG+CGG | - | chr4_1:54821901-54821920 | None:intergenic | 50.0% | |
| AGAATGGCGAAGAAAGGAGG+AGG | + | chr4_1:54822019-54822038 | Msa0556560:exon | 50.0% | |
| ! | GGAGGAAGACAATGATGACG+AGG | + | chr4_1:54822474-54822493 | Msa0556560:CDS | 50.0% |
| ! | GGCAAGGAGAAGGGCTTTAT+TGG | + | chr4_1:54822511-54822530 | Msa0556560:CDS | 50.0% |
| !! | GTTGGAAGAAAGCACCGACA+TGG | + | chr4_1:54822936-54822955 | Msa0556560:CDS | 50.0% |
| TGTGGAAACCGACCATGCTT+AGG | - | chr4_1:54823276-54823295 | None:intergenic | 50.0% | |
| GCCAAGATAGTCACGATGCT+AGG | + | chr4_1:54824194-54824213 | Msa0556560:intron | 50.0% | |
| TGGATGCACGTCTACCTTGA+GGG | + | chr4_1:54824332-54824351 | Msa0556560:intron | 50.0% | |
| ! | GCGCCTGATCCAATTTTGTC+AGG | - | chr4_1:54824370-54824389 | None:intergenic | 50.0% |
| ! | GGCGCCCTTTATTGCTGTTA+TGG | + | chr4_1:54824385-54824404 | Msa0556560:intron | 50.0% |
| ATTGCCGGAAAATGGTTCCG+GGG | + | chr4_1:54824849-54824868 | Msa0556560:intron | 50.0% | |
| !! | ATGATCGACTTGCTGCCCTT+CGG | - | chr4_1:54825374-54825393 | None:intergenic | 50.0% |
| AGCTCGCCTTGAAGAGATCA+AGG | + | chr4_1:54825405-54825424 | Msa0556560:CDS | 50.0% | |
| !! | GCTTTGATTGGGTTGAAGGC+CGG | - | chr4_1:54825671-54825690 | None:intergenic | 50.0% |
| CGCTAACCCAGTGCTTTGAT+TGG | - | chr4_1:54825683-54825702 | None:intergenic | 50.0% | |
| CTAACAGTGACCAGGTCATG+CGG | - | chr4_1:54825718-54825737 | None:intergenic | 50.0% | |
| ! | TCAGTAGCAACCTGGGTTGA+CGG | + | chr4_1:54826096-54826115 | Msa0556560:intron | 50.0% |
| !! | ACATAACTGCCGGTTCGGTA+CGG | - | chr4_1:54826196-54826215 | None:intergenic | 50.0% |
| ! | ACCTGACATAACTGCCGGTT+CGG | - | chr4_1:54826201-54826220 | None:intergenic | 50.0% |
| TCACATTGGCGTGCAGAGTT+CGG | + | chr4_1:54827323-54827342 | Msa0556560:CDS | 50.0% | |
| AAGCGTTCGAGACCAGCTAA+TGG | + | chr4_1:54827435-54827454 | Msa0556560:CDS | 50.0% | |
| AGCGTTCGAGACCAGCTAAT+GGG | + | chr4_1:54827436-54827455 | Msa0556560:CDS | 50.0% | |
| TTACTGGAGACAAGACCAGC+TGG | - | chr4_1:54827593-54827612 | None:intergenic | 50.0% | |
| TGGGACGGGTCTTCTTCTTT+CGG | + | chr4_1:54827775-54827794 | Msa0556560:intron | 50.0% | |
| CACTTAACACTTCCACCTGC+CGG | + | chr4_1:54828049-54828068 | Msa0556560:intron | 50.0% | |
| TTGATAAGGTTTCCGGCAGG+TGG | - | chr4_1:54828064-54828083 | None:intergenic | 50.0% | |
| ATCCACGCTAAGTGTGTAGG+CGG | - | chr4_1:54828194-54828213 | None:intergenic | 50.0% | |
| TAAGGGTAGCAATGTGGGGA+TGG | - | chr4_1:54828224-54828243 | None:intergenic | 50.0% | |
| GATACCACTGTTGGGACTTC+CGG | + | chr4_1:54828254-54828273 | Msa0556560:intron | 50.0% | |
| ATACCACTGTTGGGACTTCC+GGG | + | chr4_1:54828255-54828274 | Msa0556560:intron | 50.0% | |
| ! | ACAAGTGTTTAAGGCTCCCC+CGG | - | chr4_1:54828276-54828295 | None:intergenic | 50.0% |
| GGGAGCCTTAAACACTTGTG+TGG | + | chr4_1:54828277-54828296 | Msa0556560:intron | 50.0% | |
| CAACGTAGTGAAGAGCAGTG+GGG | + | chr4_1:54828341-54828360 | Msa0556560:intron | 50.0% | |
| AGTGGTCAGCCTCAGTTTCT+AGG | - | chr4_1:54828832-54828851 | None:intergenic | 50.0% | |
| GAGACGCTATTCGTGAACGA+CGG | + | chr4_1:54829035-54829054 | Msa0556560:CDS | 50.0% | |
| AAGACATGAGAAGCGGGTGA+TGG | + | chr4_1:54829060-54829079 | Msa0556560:CDS | 50.0% | |
| ! | TGGTGCTGGAGTTACGATTG+AGG | + | chr4_1:54829084-54829103 | Msa0556560:CDS | 50.0% |
| CAGTCTCCTCTGGCAAAAAG+GGG | - | chr4_1:54829363-54829382 | None:intergenic | 50.0% | |
| CACAGTCTCCTCTGGCAAAA+AGG | - | chr4_1:54829365-54829384 | None:intergenic | 50.0% | |
| ! | CTTTTTGCCAGAGGAGACTG+TGG | + | chr4_1:54829363-54829382 | Msa0556560:CDS | 50.0% |
| CGTTAAGAATCGCAAGGGAC+AGG | + | chr4_1:54829691-54829710 | Msa0556560:CDS | 50.0% | |
| AGGCCAAATGCACCTTATGG+CGG | + | chr4_1:54829728-54829747 | Msa0556560:CDS | 50.0% | |
| AGTTACACGCCCATCTAAGC+AGG | - | chr4_1:54829872-54829891 | None:intergenic | 50.0% | |
| AGGCTACAGACTTCACTGCC+AGG | - | chr4_1:54821817-54821836 | None:intergenic | 55.0% | |
| !! | CGCAGTTGGGAGGGGTATTT+AGG | - | chr4_1:54821878-54821897 | None:intergenic | 55.0% |
| CTCGTCGTCCATGTCTTCAG+TGG | - | chr4_1:54822110-54822129 | None:intergenic | 55.0% | |
| ! | AAGTGATGACGAGGCCCCAA+AGG | + | chr4_1:54823110-54823129 | Msa0556560:CDS | 55.0% |
| GTGGATGCACGTCTACCTTG+AGG | + | chr4_1:54824331-54824350 | Msa0556560:intron | 55.0% | |
| GGATTCAACACCTGCCCTCA+AGG | - | chr4_1:54824349-54824368 | None:intergenic | 55.0% | |
| TCACAGGGTCCCCAATGTCT+CGG | - | chr4_1:54825031-54825050 | None:intergenic | 55.0% | |
| GCCCTTCGGACTTGAGTAGA+AGG | - | chr4_1:54825360-54825379 | None:intergenic | 55.0% | |
| AATCGGGGGTGGAAGAATGC+AGG | - | chr4_1:54826005-54826024 | None:intergenic | 55.0% | |
| ATCCGATGACCGTACCGAAC+CGG | + | chr4_1:54826184-54826203 | Msa0556560:intron | 55.0% | |
| ACCGAACCGGCAGTTATGTC+AGG | + | chr4_1:54826197-54826216 | Msa0556560:intron | 55.0% | |
| CCAGGACCTGACATAACTGC+CGG | - | chr4_1:54826206-54826225 | None:intergenic | 55.0% | |
| GCGATAGAATCGGCTGGCAT+TGG | - | chr4_1:54826969-54826988 | None:intergenic | 55.0% | |
| GGTGATTCAGCAGAGACCAG+AGG | - | chr4_1:54827008-54827027 | None:intergenic | 55.0% | |
| ! | GTGGTTGTTAATGGGCCAGC+TGG | + | chr4_1:54827575-54827594 | Msa0556560:CDS | 55.0% |
| GTGGTTGGACACCCTCGTAT+GGG | - | chr4_1:54828113-54828132 | None:intergenic | 55.0% | |
| TGTGGTTGGACACCCTCGTA+TGG | - | chr4_1:54828114-54828133 | None:intergenic | 55.0% | |
| TCCACGCTAAGTGTGTAGGC+GGG | - | chr4_1:54828193-54828212 | None:intergenic | 55.0% | |
| TACCACTGTTGGGACTTCCG+GGG | + | chr4_1:54828256-54828275 | Msa0556560:intron | 55.0% | |
| TTGTTGAGCTAGGTGCGAGG+AGG | + | chr4_1:54828393-54828412 | Msa0556560:intron | 55.0% | |
| AGTGGCACACCTCACCTTAC+AGG | + | chr4_1:54828457-54828476 | Msa0556560:intron | 55.0% | |
| CTTACAGGCCGACGTGGTAA+GGG | + | chr4_1:54828472-54828491 | Msa0556560:intron | 55.0% | |
| AGCTGCAAAACGCGCTGCAA+AGG | + | chr4_1:54829222-54829241 | Msa0556560:CDS | 55.0% | |
| ! | AGCTGTCCCCTTTTTGCCAG+AGG | + | chr4_1:54829354-54829373 | Msa0556560:CDS | 55.0% |
| TTGCCAGAGGAGACTGTGGA+CGG | + | chr4_1:54829367-54829386 | Msa0556560:CDS | 55.0% | |
| TTTCCGTCCACAGTCTCCTC+TGG | - | chr4_1:54829373-54829392 | None:intergenic | 55.0% | |
| GGCCAAATGCACCTTATGGC+GGG | + | chr4_1:54829729-54829748 | Msa0556560:CDS | 55.0% | |
| GCCAAATGCACCTTATGGCG+GGG | + | chr4_1:54829730-54829749 | Msa0556560:CDS | 55.0% | |
| TCCCCGCCATAAGGTGCATT+TGG | - | chr4_1:54829734-54829753 | None:intergenic | 55.0% | |
| GCCCATCTAAGCAGGTGATG+AGG | - | chr4_1:54829864-54829883 | None:intergenic | 55.0% | |
| CACTGATGAGGATGGCGACG+AGG | + | chr4_1:54822453-54822472 | Msa0556560:CDS | 60.0% | |
| TGATGAGGATGGCGACGAGG+AGG | + | chr4_1:54822456-54822475 | Msa0556560:CDS | 60.0% | |
| TGACGAGGCCCCAAAGGAAG+AGG | + | chr4_1:54823116-54823135 | Msa0556560:CDS | 60.0% | |
| TGCACGTCTACCTTGAGGGC+AGG | + | chr4_1:54824336-54824355 | Msa0556560:intron | 60.0% | |
| ! | CCGACCCCGGAACCATTTTC+CGG | - | chr4_1:54824856-54824875 | None:intergenic | 60.0% |
| CCGGAAAATGGTTCCGGGGT+CGG | + | chr4_1:54824853-54824872 | Msa0556560:intron | 60.0% | |
| GAAAATGGTTCCGGGGTCGG+TGG | + | chr4_1:54824856-54824875 | Msa0556560:intron | 60.0% | |
| ! | ATTCTAGAGGCCACCGACCC+CGG | - | chr4_1:54824869-54824888 | None:intergenic | 60.0% |
| GAGACATTGGGGACCCTGTG+AGG | + | chr4_1:54825030-54825049 | Msa0556560:intron | 60.0% | |
| !! | GATTGGGTTGAAGGCCGGTC+TGG | - | chr4_1:54825666-54825685 | None:intergenic | 60.0% |
| !! | AAGCACTGGGTTAGCGGCTG+CGG | + | chr4_1:54825687-54825706 | Msa0556560:intron | 60.0% |
| !! | TGCCGGTTCGGTACGGTCAT+CGG | - | chr4_1:54826189-54826208 | None:intergenic | 60.0% |
| CCGGCAGTTATGTCAGGTCC+TGG | + | chr4_1:54826203-54826222 | Msa0556560:intron | 60.0% | |
| ACCCGCCTACACACTTAGCG+TGG | + | chr4_1:54828189-54828208 | Msa0556560:intron | 60.0% | |
| ACCACTGTTGGGACTTCCGG+GGG | + | chr4_1:54828257-54828276 | Msa0556560:intron | 60.0% | |
| CGTAGTGAAGAGCAGTGGGG+CGG | + | chr4_1:54828344-54828363 | Msa0556560:intron | 60.0% | |
| GTAGTGAAGAGCAGTGGGGC+GGG | + | chr4_1:54828345-54828364 | Msa0556560:intron | 60.0% | |
| CGGTTGTTGAGCTAGGTGCG+AGG | + | chr4_1:54828390-54828409 | Msa0556560:intron | 60.0% | |
| CCTTACCACGTCGGCCTGTA+AGG | - | chr4_1:54828474-54828493 | None:intergenic | 60.0% | |
| CCTTACAGGCCGACGTGGTA+AGG | + | chr4_1:54828471-54828490 | Msa0556560:intron | 60.0% | |
| ! | CATGAGAAGCGGGTGATGGC+TGG | + | chr4_1:54829064-54829083 | Msa0556560:CDS | 60.0% |
| ! | CCAGTGGATTCCCCGCCATA+AGG | - | chr4_1:54829743-54829762 | None:intergenic | 60.0% |
| ! | CCTTATGGCGGGGAATCCAC+TGG | + | chr4_1:54829740-54829759 | Msa0556560:CDS | 60.0% |
| CGTAAGACGGCGGCGCAGTT+GGG | - | chr4_1:54821891-54821910 | None:intergenic | 65.0% | |
| ACGTAAGACGGCGGCGCAGT+TGG | - | chr4_1:54821892-54821911 | None:intergenic | 65.0% | |
| TGCGGTCACACCGCATGACC+TGG | + | chr4_1:54825705-54825724 | Msa0556560:intron | 65.0% | |
| TCCCCCGGAAGTCCCAACAG+TGG | - | chr4_1:54828261-54828280 | None:intergenic | 65.0% | |
| CCACGTCGGCCTGTAAGGTG+AGG | - | chr4_1:54828469-54828488 | None:intergenic | 65.0% | |
| CCTCACCTTACAGGCCGACG+TGG | + | chr4_1:54828466-54828485 | Msa0556560:intron | 65.0% | |
| ! | AAGCGGGTGATGGCTGGTGC+TGG | + | chr4_1:54829070-54829089 | Msa0556560:CDS | 65.0% |
| AGACGGCGGCGCAGTTGGGA+GGG | - | chr4_1:54821887-54821906 | None:intergenic | 70.0% | |
| AAGACGGCGGCGCAGTTGGG+AGG | - | chr4_1:54821888-54821907 | None:intergenic | 70.0% | |
| GTGAAGAGCAGTGGGGCGGG+AGG | + | chr4_1:54828348-54828367 | Msa0556560:intron | 70.0% | |
| AAGAGCAGTGGGGCGGGAGG+AGG | + | chr4_1:54828351-54828370 | Msa0556560:intron | 70.0% | |
| AGAGCAGTGGGGCGGGAGGA+GGG | + | chr4_1:54828352-54828371 | Msa0556560:intron | 70.0% | |
| GACGGCGGCGCAGTTGGGAG+GGG | - | chr4_1:54821886-54821905 | None:intergenic | 75.0% | |
| ! | GCAGTGGGGCGGGAGGAGGG+AGG | + | chr4_1:54828355-54828374 | Msa0556560:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 54821793 | 54830059 | 54821793 | ID=Msa0556560;Name=Msa0556560 |
| chr4_1 | mRNA | 54821793 | 54830059 | 54821793 | ID=Msa0556560-mRNA-1;Parent=Msa0556560;Name=Msa0556560-mRNA-1;_AED=0.07;_eAED=0.07;_QI=229|1|1|1|1|1|16|254|657 |
| chr4_1 | exon | 54821793 | 54822139 | 54821793 | ID=Msa0556560-mRNA-1:exon:16214;Parent=Msa0556560-mRNA-1 |
| chr4_1 | exon | 54822235 | 54822326 | 54822235 | ID=Msa0556560-mRNA-1:exon:16215;Parent=Msa0556560-mRNA-1 |
| chr4_1 | exon | 54822436 | 54822538 | 54822436 | ID=Msa0556560-mRNA-1:exon:16216;Parent=Msa0556560-mRNA-1 |
| chr4_1 | exon | 54822841 | 54822980 | 54822841 | ID=Msa0556560-mRNA-1:exon:16217;Parent=Msa0556560-mRNA-1 |
| chr4_1 | exon | 54823102 | 54823239 | 54823102 | ID=Msa0556560-mRNA-1:exon:16218;Parent=Msa0556560-mRNA-1 |
| chr4_1 | exon | 54823370 | 54823449 | 54823370 | ID=Msa0556560-mRNA-1:exon:16219;Parent=Msa0556560-mRNA-1 |
| chr4_1 | exon | 54824540 | 54824627 | 54824540 | ID=Msa0556560-mRNA-1:exon:16220;Parent=Msa0556560-mRNA-1 |
| chr4_1 | exon | 54825262 | 54825441 | 54825262 | ID=Msa0556560-mRNA-1:exon:16221;Parent=Msa0556560-mRNA-1 |
| chr4_1 | exon | 54826867 | 54827040 | 54826867 | ID=Msa0556560-mRNA-1:exon:16222;Parent=Msa0556560-mRNA-1 |
| chr4_1 | exon | 54827144 | 54827221 | 54827144 | ID=Msa0556560-mRNA-1:exon:16223;Parent=Msa0556560-mRNA-1 |
| chr4_1 | exon | 54827318 | 54827457 | 54827318 | ID=Msa0556560-mRNA-1:exon:16224;Parent=Msa0556560-mRNA-1 |
| chr4_1 | exon | 54827541 | 54827652 | 54827541 | ID=Msa0556560-mRNA-1:exon:16225;Parent=Msa0556560-mRNA-1 |
| chr4_1 | exon | 54829004 | 54829269 | 54829004 | ID=Msa0556560-mRNA-1:exon:16226;Parent=Msa0556560-mRNA-1 |
| chr4_1 | exon | 54829348 | 54829411 | 54829348 | ID=Msa0556560-mRNA-1:exon:16227;Parent=Msa0556560-mRNA-1 |
| chr4_1 | exon | 54829501 | 54829569 | 54829501 | ID=Msa0556560-mRNA-1:exon:16228;Parent=Msa0556560-mRNA-1 |
| chr4_1 | exon | 54829674 | 54830059 | 54829674 | ID=Msa0556560-mRNA-1:exon:16229;Parent=Msa0556560-mRNA-1 |
| chr4_1 | five_prime_UTR | 54821793 | 54822021 | 54821793 | ID=Msa0556560-mRNA-1:five_prime_utr;Parent=Msa0556560-mRNA-1 |
| chr4_1 | CDS | 54822022 | 54822139 | 54822022 | ID=Msa0556560-mRNA-1:cds;Parent=Msa0556560-mRNA-1 |
| chr4_1 | CDS | 54822235 | 54822326 | 54822235 | ID=Msa0556560-mRNA-1:cds;Parent=Msa0556560-mRNA-1 |
| chr4_1 | CDS | 54822436 | 54822538 | 54822436 | ID=Msa0556560-mRNA-1:cds;Parent=Msa0556560-mRNA-1 |
| chr4_1 | CDS | 54822841 | 54822980 | 54822841 | ID=Msa0556560-mRNA-1:cds;Parent=Msa0556560-mRNA-1 |
| chr4_1 | CDS | 54823102 | 54823239 | 54823102 | ID=Msa0556560-mRNA-1:cds;Parent=Msa0556560-mRNA-1 |
| chr4_1 | CDS | 54823370 | 54823449 | 54823370 | ID=Msa0556560-mRNA-1:cds;Parent=Msa0556560-mRNA-1 |
| chr4_1 | CDS | 54824540 | 54824627 | 54824540 | ID=Msa0556560-mRNA-1:cds;Parent=Msa0556560-mRNA-1 |
| chr4_1 | CDS | 54825262 | 54825441 | 54825262 | ID=Msa0556560-mRNA-1:cds;Parent=Msa0556560-mRNA-1 |
| chr4_1 | CDS | 54826867 | 54827040 | 54826867 | ID=Msa0556560-mRNA-1:cds;Parent=Msa0556560-mRNA-1 |
| chr4_1 | CDS | 54827144 | 54827221 | 54827144 | ID=Msa0556560-mRNA-1:cds;Parent=Msa0556560-mRNA-1 |
| chr4_1 | CDS | 54827318 | 54827457 | 54827318 | ID=Msa0556560-mRNA-1:cds;Parent=Msa0556560-mRNA-1 |
| chr4_1 | CDS | 54827541 | 54827652 | 54827541 | ID=Msa0556560-mRNA-1:cds;Parent=Msa0556560-mRNA-1 |
| chr4_1 | CDS | 54829004 | 54829269 | 54829004 | ID=Msa0556560-mRNA-1:cds;Parent=Msa0556560-mRNA-1 |
| chr4_1 | CDS | 54829348 | 54829411 | 54829348 | ID=Msa0556560-mRNA-1:cds;Parent=Msa0556560-mRNA-1 |
| chr4_1 | CDS | 54829501 | 54829569 | 54829501 | ID=Msa0556560-mRNA-1:cds;Parent=Msa0556560-mRNA-1 |
| chr4_1 | CDS | 54829674 | 54829805 | 54829674 | ID=Msa0556560-mRNA-1:cds;Parent=Msa0556560-mRNA-1 |
| chr4_1 | three_prime_UTR | 54829806 | 54830059 | 54829806 | ID=Msa0556560-mRNA-1:three_prime_utr;Parent=Msa0556560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
