Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0283990 | RHN73531.1 | 98.547 | 344 | 5 | 0 | 1 | 344 | 1 | 344 | 0.0 | 687 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0283990 | sp|Q70Z18|NAP1B_TOBAC | 79.667 | 300 | 58 | 2 | 1 | 297 | 1 | 300 | 9.88e-158 | 450 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0145190 | Msa0283990 | 0.811073 | 8.401658e-51 | -8.615850e-47 |
| Msa0194440 | Msa0283990 | 0.830730 | 2.490743e-55 | -8.615850e-47 |
| Msa0217290 | Msa0283990 | 0.801733 | 7.835056e-49 | -8.615850e-47 |
| Msa0283990 | Msa0335730 | 0.817795 | 2.740257e-52 | -8.615850e-47 |
| Msa0283990 | Msa0434180 | 0.811272 | 7.607011e-51 | -8.615850e-47 |
| Msa0283990 | Msa0450400 | -0.808986 | 2.365372e-50 | -8.615850e-47 |
| Msa0283990 | Msa0501380 | 0.809709 | 1.654801e-50 | -8.615850e-47 |
| Msa0283990 | Msa0532990 | 0.800652 | 1.303547e-48 | -8.615850e-47 |
| Msa0283990 | Msa0537720 | 0.814402 | 1.569253e-51 | -8.615850e-47 |
| Msa0283990 | Msa0556560 | 0.812239 | 4.685285e-51 | -8.615850e-47 |
| Msa0283990 | Msa0583360 | -0.806246 | 9.027352e-50 | -8.615850e-47 |
| Msa0283990 | Msa0766760 | 0.806747 | 7.077936e-50 | -8.615850e-47 |
| Msa0283990 | Msa0826320 | 0.841376 | 4.933630e-58 | -8.615850e-47 |
| Msa0283990 | Msa0834660 | 0.832084 | 1.156261e-55 | -8.615850e-47 |
| Msa0283990 | Msa1104560 | 0.802226 | 6.202716e-49 | -8.615850e-47 |
| Msa0283990 | Msa1155170 | -0.816235 | 6.139050e-52 | -8.615850e-47 |
| Msa0283990 | Msa1225860 | -0.811932 | 5.467569e-51 | -8.615850e-47 |
| Msa0283990 | Msa1384240 | 0.813340 | 2.689345e-51 | -8.615850e-47 |
| Msa0283990 | Msa1454430 | 0.804942 | 1.695751e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0283990 | MtrunA17_Chr2g0299501 | 98.547 | 344 | 5 | 0 | 1 | 344 | 1 | 344 | 0.0 | 687 |
| Msa0283990 | MtrunA17_Chr2g0330141 | 73.214 | 280 | 74 | 1 | 20 | 298 | 18 | 297 | 2.69e-137 | 395 |
| Msa0283990 | MtrunA17_Chr2g0299511 | 67.063 | 252 | 79 | 2 | 46 | 297 | 5 | 252 | 3.65e-120 | 349 |
| Msa0283990 | MtrunA17_Chr2g0299521 | 55.036 | 278 | 85 | 4 | 7 | 280 | 3 | 244 | 2.93e-87 | 263 |
| Msa0283990 | MtrunA17_Chr4g0060621 | 26.728 | 217 | 124 | 6 | 55 | 270 | 26 | 208 | 1.48e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0283990 | AT2G19480.3 | 75.920 | 299 | 70 | 1 | 1 | 297 | 1 | 299 | 5.19e-154 | 438 |
| Msa0283990 | AT2G19480.2 | 75.920 | 299 | 70 | 1 | 1 | 297 | 1 | 299 | 8.89e-154 | 437 |
| Msa0283990 | AT2G19480.1 | 75.920 | 299 | 70 | 1 | 1 | 297 | 1 | 299 | 1.10e-153 | 437 |
| Msa0283990 | AT5G56950.1 | 76.393 | 305 | 62 | 2 | 1 | 299 | 1 | 301 | 2.46e-153 | 436 |
| Msa0283990 | AT4G26110.2 | 73.841 | 302 | 76 | 2 | 1 | 299 | 1 | 302 | 5.10e-148 | 422 |
| Msa0283990 | AT4G26110.1 | 73.841 | 302 | 76 | 2 | 1 | 299 | 1 | 302 | 1.12e-147 | 422 |
| Msa0283990 | AT3G13782.2 | 57.040 | 277 | 97 | 4 | 29 | 296 | 34 | 297 | 4.68e-99 | 296 |
| Msa0283990 | AT3G13782.1 | 57.040 | 277 | 97 | 4 | 29 | 296 | 34 | 297 | 4.68e-99 | 296 |
| Msa0283990 | AT1G74560.3 | 28.922 | 204 | 111 | 5 | 55 | 257 | 31 | 201 | 5.66e-16 | 77.4 |
| Msa0283990 | AT1G18800.1 | 29.197 | 274 | 140 | 8 | 55 | 327 | 27 | 247 | 1.97e-12 | 67.0 |
| Msa0283990 | AT1G74560.1 | 26.374 | 273 | 145 | 8 | 55 | 326 | 31 | 248 | 6.68e-11 | 62.4 |
Find 110 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATTATTACCAATATTTC+TGG | 0.141009 | 2_3:-21789901 | Msa0283990:three_prime_UTR |
| ACTCAAGCTTGAACCCTTTC+GGG | 0.194636 | 2_3:+21791600 | None:intergenic |
| AAGCACAAACTTTAAGTATC+TGG | 0.208850 | 2_3:+21789922 | None:intergenic |
| AGAAAGGAGTTCCTTCATTT+TGG | 0.228811 | 2_3:-21791837 | Msa0283990:CDS |
| GAGGGAGAAGGGCATTTAAA+AGG | 0.234230 | 2_3:-21793887 | Msa0283990:five_prime_UTR |
| TATGCTGCTGAAAGTTGTTT+TGG | 0.256948 | 2_3:-21790141 | Msa0283990:three_prime_UTR |
| AGCATTCTTTGCACCCTTCT+TGG | 0.264967 | 2_3:+21791318 | None:intergenic |
| GAAGAAAGTGACAGCGAAAA+AGG | 0.266365 | 2_3:+21793786 | None:intergenic |
| AACTCAAGCTTGAACCCTTT+CGG | 0.280677 | 2_3:+21791599 | None:intergenic |
| TCATCATCTTCAGGGACTTC+TGG | 0.285909 | 2_3:+21791241 | None:intergenic |
| TCTGAGTTTACCAGAAATAT+TGG | 0.290692 | 2_3:+21789891 | None:intergenic |
| CCAATTGCTTTCTCCAATAT+AGG | 0.298193 | 2_3:+21791503 | None:intergenic |
| TCAATGTCTTCATCATCTTC+AGG | 0.308364 | 2_3:+21791232 | None:intergenic |
| ACTGAAATTCAATGGCTTCC+TGG | 0.309134 | 2_3:-21791376 | Msa0283990:CDS |
| TGAGGTTCTCAGAGAGATTC+AGG | 0.310287 | 2_3:-21793226 | Msa0283990:intron |
| TCAGTGGTGTTGTGATTTAT+TGG | 0.315678 | 2_3:-21789969 | Msa0283990:three_prime_UTR |
| AGCAGCAATAGTTTGTTTCT+TGG | 0.317359 | 2_3:-21790170 | Msa0283990:three_prime_UTR |
| CATGCTGTATCATGGTTTAC+TGG | 0.332154 | 2_3:-21790944 | Msa0283990:CDS |
| TTATTGGTACTTCAATTCAT+AGG | 0.340990 | 2_3:-21789953 | Msa0283990:three_prime_UTR |
| GCATTCTTTGCACCCTTCTT+GGG | 0.343448 | 2_3:+21791319 | None:intergenic |
| CCTATATTGGAGAAAGCAAT+TGG | 0.347426 | 2_3:-21791503 | Msa0283990:CDS |
| GTTTACTGGAGAGGCTGCTC+AGG | 0.349498 | 2_3:-21790930 | Msa0283990:CDS |
| GTCCTAGTGCCTGATGAAAA+AGG | 0.368358 | 2_3:-21790117 | Msa0283990:three_prime_UTR |
| GCAGCAATAGTTTGTTTCTT+GGG | 0.375614 | 2_3:-21790169 | Msa0283990:three_prime_UTR |
| GCTTTCACAAGTTTCAGTTT+TGG | 0.387761 | 2_3:+21791285 | None:intergenic |
| TGATGAGGATGAACCTATAT+TGG | 0.398700 | 2_3:-21791516 | Msa0283990:CDS |
| TCAACACGCTTCCTGACAAC+AGG | 0.403613 | 2_3:+21793246 | None:intergenic |
| TCAGCTTGGTGAGGGTCAGC+AGG | 0.404930 | 2_3:-21790214 | Msa0283990:exon |
| GATGTTGAAACCTTCTTTGT+TGG | 0.416779 | 2_3:+21793743 | None:intergenic |
| AGGGAGAAGGGCATTTAAAA+GGG | 0.422305 | 2_3:-21793886 | Msa0283990:five_prime_UTR |
| AGTAAGATTCAGAGTCTTGC+TGG | 0.429764 | 2_3:-21793300 | Msa0283990:CDS |
| GAGAGATAGAGAGAAAGAAA+AGG | 0.430092 | 2_3:+21793808 | None:intergenic |
| GGTAGTCATTGTTGAGAAAG+AGG | 0.433009 | 2_3:+21793764 | None:intergenic |
| TTTACAGGACTGAAATTCAA+TGG | 0.435219 | 2_3:-21791384 | Msa0283990:intron |
| TGGAAAATGCTTGACACAAA+AGG | 0.436813 | 2_3:-21791356 | Msa0283990:CDS |
| ACAGGGAGAACATGATGAAT+TGG | 0.450550 | 2_3:-21792358 | Msa0283990:intron |
| AACATCGCAGATCTCAGTTC+TGG | 0.462289 | 2_3:-21793726 | Msa0283990:intron |
| TATTTCTGGTAAACTCAGAT+TGG | 0.462672 | 2_3:-21789887 | Msa0283990:three_prime_UTR |
| AGAGTCTATCCCCTGTTGTC+AGG | 0.462985 | 2_3:-21793257 | Msa0283990:CDS |
| CATCCTCATCTTCGTCATCC+AGG | 0.463974 | 2_3:+21790891 | None:intergenic |
| AGAGATAGAGAGAAAGAAAA+GGG | 0.466345 | 2_3:+21793809 | None:intergenic |
| TCATCTTCAGGGACTTCTGG+TGG | 0.470800 | 2_3:+21791244 | None:intergenic |
| TACTGGAGAGGCTGCTCAGG+GGG | 0.473604 | 2_3:-21790927 | Msa0283990:CDS |
| CAATGTCTTCATCATCTTCA+GGG | 0.477299 | 2_3:+21791233 | None:intergenic |
| TGAAGACATTGATGAAGATA+TGG | 0.478182 | 2_3:-21791221 | Msa0283990:intron |
| ATGGAACAGGACTACGACAT+TGG | 0.478198 | 2_3:-21791100 | Msa0283990:CDS |
| TAACAACCATCTCCAAAAGT+AGG | 0.480184 | 2_3:+21789997 | None:intergenic |
| AAATTCAGACTATAAAACTA+AGG | 0.492846 | 2_3:+21790047 | None:intergenic |
| TGGAACAGGACTACGACATT+GGG | 0.493158 | 2_3:-21791099 | Msa0283990:intron |
| AGCACAAACTTTAAGTATCT+GGG | 0.499462 | 2_3:+21789923 | None:intergenic |
| CTTGACGAAGACATATCATA+TGG | 0.503732 | 2_3:-21791540 | Msa0283990:CDS |
| TGAAGACGAGGACGAGGATG+AGG | 0.508477 | 2_3:-21790843 | Msa0283990:CDS |
| CTTTGTAGCTCTCAATGAAG+AGG | 0.508531 | 2_3:-21793621 | Msa0283990:intron |
| ACTTCAGAATCAGATGGAAC+AGG | 0.508702 | 2_3:-21791113 | Msa0283990:CDS |
| GAACCTTGAGAGCGTTAACT+AGG | 0.521908 | 2_3:+21793588 | None:intergenic |
| CAATGACGTGTTATCTGAAG+AGG | 0.528076 | 2_3:-21791797 | Msa0283990:intron |
| TAAGATACCTTTGTGTACAA+TGG | 0.530713 | 2_3:+21792276 | None:intergenic |
| TCAAAGATATCAAGTGGAGC+AGG | 0.534183 | 2_3:-21791631 | Msa0283990:CDS |
| AACAACCATCTCCAAAAGTA+GGG | 0.539643 | 2_3:+21789998 | None:intergenic |
| ATAGCATTGAGCCAAAATGA+AGG | 0.543803 | 2_3:+21791826 | None:intergenic |
| AAGGGTAGGAAAATGAATCA+AGG | 0.543937 | 2_3:+21790066 | None:intergenic |
| GCAGGATCGATGACCCGAAA+GGG | 0.545024 | 2_3:-21791613 | Msa0283990:CDS |
| TGAAGTGGAAGGGGCAGCAG+TGG | 0.546776 | 2_3:-21791969 | Msa0283990:CDS |
| CTATATTGGAGAAAGCAATT+GGG | 0.546912 | 2_3:-21791502 | Msa0283990:intron |
| TTAAAAGGGAGAGGAAACAT+AGG | 0.547060 | 2_3:-21793872 | Msa0283990:five_prime_UTR |
| TGATGATGAAGACGAGGACG+AGG | 0.548406 | 2_3:-21790849 | Msa0283990:CDS |
| ATAGGATTAGAATCAGTTTG+AGG | 0.551586 | 2_3:-21793854 | Msa0283990:five_prime_UTR |
| GGGAGAACATGATGAATTGG+AGG | 0.554396 | 2_3:-21792355 | Msa0283990:CDS |
| AACTATTGCTGCTTGCACTC+TGG | 0.556460 | 2_3:+21790180 | None:intergenic |
| AACTACAGCTGATGCAGAAG+AGG | 0.562952 | 2_3:-21791945 | Msa0283990:CDS |
| ACAATGACTACCAACAAAGA+AGG | 0.564449 | 2_3:-21793753 | Msa0283990:CDS |
| GACATATCATATGGTTGATG+AGG | 0.564915 | 2_3:-21791531 | Msa0283990:CDS |
| TTTACTGGAGAGGCTGCTCA+GGG | 0.567066 | 2_3:-21790929 | Msa0283990:CDS |
| AAAAGGATTGCAATTTCATG+TGG | 0.571094 | 2_3:-21790100 | Msa0283990:three_prime_UTR |
| CAGTAAACCATGATACAGCA+TGG | 0.577839 | 2_3:+21790945 | None:intergenic |
| TGTTGTCAGGAAGCGTGTTG+AGG | 0.580753 | 2_3:-21793244 | Msa0283990:CDS |
| CAGCGATATGACATTGTGAA+TGG | 0.586198 | 2_3:-21791998 | Msa0283990:CDS |
| GAAGGGCATTTAAAAGGGAG+AGG | 0.587101 | 2_3:-21793881 | Msa0283990:five_prime_UTR |
| AGTAAACCATGATACAGCAT+GGG | 0.591975 | 2_3:+21790946 | None:intergenic |
| CGGAATAGCTCAGCTTGGTG+AGG | 0.592016 | 2_3:-21790223 | Msa0283990:exon |
| TGACCTAGTTAACGCTCTCA+AGG | 0.595969 | 2_3:-21793591 | Msa0283990:intron |
| AGGGTAGGAAAATGAATCAA+GGG | 0.596668 | 2_3:+21790067 | None:intergenic |
| TATTGCTGCTTGCACTCTGG+TGG | 0.598078 | 2_3:+21790183 | None:intergenic |
| AGTTTCTCAAAGATATCAAG+TGG | 0.598487 | 2_3:-21791637 | Msa0283990:CDS |
| CAGCTTGGTGAGGGTCAGCA+GGG | 0.600234 | 2_3:-21790213 | Msa0283990:exon |
| CAACACGCTTCCTGACAACA+GGG | 0.603160 | 2_3:+21793247 | None:intergenic |
| TGGTGTCACTGAAGTGGAAG+GGG | 0.606118 | 2_3:-21791978 | Msa0283990:CDS |
| ATTGTATGCTTTCAGAAGAG+CGG | 0.606494 | 2_3:-21790243 | Msa0283990:CDS |
| GGAATAGCTCAGCTTGGTGA+GGG | 0.608380 | 2_3:-21790222 | Msa0283990:exon |
| AATTCAGACTATAAAACTAA+GGG | 0.610731 | 2_3:+21790048 | None:intergenic |
| TGTGAATGGTGTCACTGAAG+TGG | 0.613436 | 2_3:-21791984 | Msa0283990:CDS |
| AAGAGCGGAATAGCTCAGCT+TGG | 0.620428 | 2_3:-21790228 | Msa0283990:CDS |
| CGAAGACGACGATGAAGATG+AGG | 0.621547 | 2_3:-21790819 | Msa0283990:CDS |
| AGCAGGATCGATGACCCGAA+AGG | 0.630998 | 2_3:-21791614 | Msa0283990:CDS |
| CAGACTATAAAACTAAGGGT+AGG | 0.631685 | 2_3:+21790052 | None:intergenic |
| TTACTGGAGAGGCTGCTCAG+GGG | 0.631946 | 2_3:-21790928 | Msa0283990:CDS |
| TGAGGAACTTCAGAATCAGA+TGG | 0.642126 | 2_3:-21791119 | Msa0283990:CDS |
| AATGGTGTCACTGAAGTGGA+AGG | 0.643089 | 2_3:-21791980 | Msa0283990:CDS |
| TGTATCATGGTTTACTGGAG+AGG | 0.647089 | 2_3:-21790939 | Msa0283990:CDS |
| AGACGACGATGAAGATGAGG+AGG | 0.656233 | 2_3:-21790816 | Msa0283990:CDS |
| ATGGTGTCACTGAAGTGGAA+GGG | 0.679910 | 2_3:-21791979 | Msa0283990:CDS |
| GTATCAACCATTGTACACAA+AGG | 0.684901 | 2_3:-21792283 | Msa0283990:intron |
| AGACCTGGATGACGAAGATG+AGG | 0.691553 | 2_3:-21790894 | Msa0283990:CDS |
| GATGGTTGTTATATAGTCAG+TGG | 0.698201 | 2_3:-21789985 | Msa0283990:three_prime_UTR |
| GGATGAAGACGATGATGCTG+AGG | 0.698526 | 2_3:-21790873 | Msa0283990:CDS |
| AACACGCTTCCTGACAACAG+GGG | 0.701510 | 2_3:+21793248 | None:intergenic |
| GCTGATGCAGAAGAGGACAA+TGG | 0.706431 | 2_3:-21791938 | Msa0283990:CDS |
| GTAAACCATGATACAGCATG+GGG | 0.729299 | 2_3:+21790947 | None:intergenic |
| TGAGGATGATGATGAAGACG+AGG | 0.747747 | 2_3:-21790855 | Msa0283990:CDS |
| TAAACCATGATACAGCATGG+GGG | 0.806442 | 2_3:+21790948 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAATTAAATGAGAAAA+TGG | + | chr2_3:21791072-21791091 | None:intergenic | 10.0% |
| !!! | TCTTTAATTTATTTTTTAAC+AGG | - | chr2_3:21792568-21792587 | Msa0283990:intron | 10.0% |
| !!! | TTTTGGATTATTGTTTATTA+AGG | - | chr2_3:21790359-21790378 | Msa0283990:intron | 15.0% |
| !! | TTTGGATTATTGTTTATTAA+GGG | - | chr2_3:21790360-21790379 | Msa0283990:intron | 15.0% |
| !! | ACTCATTAAACATTATATAA+GGG | + | chr2_3:21791203-21791222 | None:intergenic | 15.0% |
| !!! | ATTATTGAATCTTATTTGTA+TGG | - | chr2_3:21791568-21791587 | Msa0283990:CDS | 15.0% |
| !!! | ATTATTGAATCTTATTTGTA+TGG | - | chr2_3:21791568-21791587 | Msa0283990:CDS | 15.0% |
| !!! | TAATCCATATTTTTCAAATT+CGG | - | chr2_3:21792147-21792166 | Msa0283990:intron | 15.0% |
| !!! | TTGTTATAATTTTTTCGTAA+TGG | - | chr2_3:21793884-21793903 | Msa0283990:five_prime_UTR | 15.0% |
| !!! | TGTTATAATTTTTTCGTAAT+GGG | - | chr2_3:21793885-21793904 | Msa0283990:five_prime_UTR | 15.0% |
| !! | TTACAACAAAACAAACAAAA+GGG | + | chr2_3:21790173-21790192 | None:intergenic | 20.0% |
| !! | TTTACAACAAAACAAACAAA+AGG | + | chr2_3:21790174-21790193 | None:intergenic | 20.0% |
| !! | TTAGGGTTTAATCAAAATTA+GGG | + | chr2_3:21790237-21790256 | None:intergenic | 20.0% |
| !! | ATTAGGGTTTAATCAAAATT+AGG | + | chr2_3:21790238-21790257 | None:intergenic | 20.0% |
| !! | GTTTAATCAATCAAAATTAG+GGG | + | chr2_3:21790305-21790324 | None:intergenic | 20.0% |
| !! | GGTTTAATCAATCAAAATTA+GGG | + | chr2_3:21790306-21790325 | None:intergenic | 20.0% |
| !!! | ATTAAACCCTAATTTTGTTT+TGG | - | chr2_3:21790318-21790337 | Msa0283990:intron | 20.0% |
| !!! | TTAAACCCTAATTTTGTTTT+GGG | - | chr2_3:21790319-21790338 | Msa0283990:intron | 20.0% |
| !! | ATTCAAACCTTCAAAATTTA+GGG | + | chr2_3:21790517-21790536 | None:intergenic | 20.0% |
| !! | ACAATCAATTAACAAAACAA+AGG | + | chr2_3:21790687-21790706 | None:intergenic | 20.0% |
| !! | GAAATCATGATAAGATAATT+TGG | - | chr2_3:21790793-21790812 | Msa0283990:intron | 20.0% |
| !!! | TCTTTTATGGTATTTGTAAA+AGG | - | chr2_3:21790852-21790871 | Msa0283990:CDS | 20.0% |
| !! | ATACATAATCAACATTCAAT+AGG | - | chr2_3:21790959-21790978 | Msa0283990:CDS | 20.0% |
| !! | TACATAATCAACATTCAATA+GGG | - | chr2_3:21790960-21790979 | Msa0283990:CDS | 20.0% |
| !! | GACTCATTAAACATTATATA+AGG | + | chr2_3:21791204-21791223 | None:intergenic | 20.0% |
| !! | GATAAATATAAGAGAAGATT+AGG | + | chr2_3:21791251-21791270 | None:intergenic | 20.0% |
| !!! | TTGATACAATTTTTGGTATT+TGG | + | chr2_3:21791415-21791434 | None:intergenic | 20.0% |
| !! | AACATCAAGTATGATTAAAT+TGG | + | chr2_3:21791540-21791559 | None:intergenic | 20.0% |
| !!! | ATTGAAACAATAAAAGTGTA+AGG | + | chr2_3:21791818-21791837 | None:intergenic | 20.0% |
| !!! | TCATTACAAAAGTACATTTA+TGG | + | chr2_3:21791998-21792017 | None:intergenic | 20.0% |
| !!! | GTTTTTTGCATTTGTAATTT+TGG | - | chr2_3:21792681-21792700 | Msa0283990:intron | 20.0% |
| !! | AAGCATGAAAATTCATTTAA+GGG | + | chr2_3:21792713-21792732 | None:intergenic | 20.0% |
| !! | TATTATTAGTTGAAATGTGT+TGG | + | chr2_3:21793237-21793256 | None:intergenic | 20.0% |
| !! | AACACATTTCAACTAATAAT+AGG | - | chr2_3:21793236-21793255 | Msa0283990:CDS | 20.0% |
| !! | AATTCAGACTATAAAACTAA+GGG | + | chr2_3:21793666-21793685 | None:intergenic | 20.0% |
| !! | AAATTCAGACTATAAAACTA+AGG | + | chr2_3:21793667-21793686 | None:intergenic | 20.0% |
| !! | TTCATTATTACCAATATTTC+TGG | - | chr2_3:21793810-21793829 | Msa0283990:five_prime_UTR | 20.0% |
| ! | TGAATTAAAAAAAGGAAGAG+AGG | - | chr2_3:21789805-21789824 | Msa0283990:three_prime_UTR | 25.0% |
| ! | GAATTAAAAAAAGGAAGAGA+GGG | - | chr2_3:21789806-21789825 | Msa0283990:three_prime_UTR | 25.0% |
| ! | AAAAGGGTCTAAAAAATTGA+AGG | + | chr2_3:21790157-21790176 | None:intergenic | 25.0% |
| !!! | TAGGGGTTTTATCAAAATTA+GGG | + | chr2_3:21790219-21790238 | None:intergenic | 25.0% |
| !!! | TTAGGGGTTTTATCAAAATT+AGG | + | chr2_3:21790220-21790239 | None:intergenic | 25.0% |
| ! | TAGGGTTTAATCAAAATTAG+GGG | + | chr2_3:21790236-21790255 | None:intergenic | 25.0% |
| ! | TTAGGGGTTTATCAAAATTA+GGG | + | chr2_3:21790289-21790308 | None:intergenic | 25.0% |
| ! | ATTAGGGGTTTATCAAAATT+AGG | + | chr2_3:21790290-21790309 | None:intergenic | 25.0% |
| ! | GGGTTTAATCAATCAAAATT+AGG | + | chr2_3:21790307-21790326 | None:intergenic | 25.0% |
| !!! | TCTGAGTTTTGATGATTTTT+TGG | - | chr2_3:21790342-21790361 | Msa0283990:intron | 25.0% |
| !! | GTATATTCCCTAAATTTTGA+AGG | - | chr2_3:21790507-21790526 | Msa0283990:intron | 25.0% |
| ! | CATTCAAACCTTCAAAATTT+AGG | + | chr2_3:21790518-21790537 | None:intergenic | 25.0% |
| ! | AGTGTATCAAAACAAATCAT+GGG | + | chr2_3:21790653-21790672 | None:intergenic | 25.0% |
| ! | AAGTGTATCAAAACAAATCA+TGG | + | chr2_3:21790654-21790673 | None:intergenic | 25.0% |
| ! | ATCAATTAACAAAACAAAGG+TGG | + | chr2_3:21790684-21790703 | None:intergenic | 25.0% |
| ! | ACAGTAATAATGTGAGTATT+GGG | + | chr2_3:21790711-21790730 | None:intergenic | 25.0% |
| ! | AAGTAAATTGATCACTTTAG+AGG | - | chr2_3:21790735-21790754 | Msa0283990:intron | 25.0% |
| !! | ATTACTTCTATTTTATCGCT+TGG | - | chr2_3:21791018-21791037 | Msa0283990:intron | 25.0% |
| !! | TTACTTCTATTTTATCGCTT+GGG | - | chr2_3:21791019-21791038 | Msa0283990:intron | 25.0% |
| !!! | AAATTGTTTTATGACTGTAC+AGG | - | chr2_3:21791335-21791354 | Msa0283990:CDS | 25.0% |
| !!! | AATTGTTTTATGACTGTACA+GGG | - | chr2_3:21791336-21791355 | Msa0283990:CDS | 25.0% |
| !!! | ACAATGGTTGATACAATTTT+TGG | + | chr2_3:21791422-21791441 | None:intergenic | 25.0% |
| ! | TATAGAGAAAATTGCATATC+AGG | - | chr2_3:21791477-21791496 | Msa0283990:intron | 25.0% |
| ! | TAGTCAAGTTCAGTAATTAA+AGG | + | chr2_3:21791682-21791701 | None:intergenic | 25.0% |
| ! | TACTGAACTTGACTATAAAA+TGG | - | chr2_3:21791687-21791706 | Msa0283990:intron | 25.0% |
| ! | AGTAAGAAGTTAACAACTAA+CGG | + | chr2_3:21791953-21791972 | None:intergenic | 25.0% |
| ! | AAGACCGAATTTGAAAAATA+TGG | + | chr2_3:21792154-21792173 | None:intergenic | 25.0% |
| !! | GGCTTGTTTAATATGAATTA+AGG | - | chr2_3:21792284-21792303 | Msa0283990:CDS | 25.0% |
| !!! | ATTTATTTTTTAACAGGCTG+AGG | - | chr2_3:21792574-21792593 | Msa0283990:intron | 25.0% |
| ! | TTATGCTATAACAGACAAAT+AGG | + | chr2_3:21792650-21792669 | None:intergenic | 25.0% |
| ! | TTATAGCATAATAACTGTGA+TGG | - | chr2_3:21792659-21792678 | Msa0283990:intron | 25.0% |
| ! | GAAGCATGAAAATTCATTTA+AGG | + | chr2_3:21792714-21792733 | None:intergenic | 25.0% |
| !! | GATTTGAAGTAGTGAATTAT+TGG | - | chr2_3:21792952-21792971 | Msa0283990:intron | 25.0% |
| ! | TCTATAACATGATTGCATTA+AGG | + | chr2_3:21793099-21793118 | None:intergenic | 25.0% |
| !! | TTTGGCTTCATGAATTTATT+TGG | - | chr2_3:21793188-21793207 | Msa0283990:intron | 25.0% |
| ! | TAAAGTGATACACTATTACA+TGG | - | chr2_3:21793323-21793342 | Msa0283990:intron | 25.0% |
| ! | TTATTGGTACTTCAATTCAT+AGG | - | chr2_3:21793758-21793777 | Msa0283990:exon | 25.0% |
| ATAGGATTAGAATCAGTTTG+AGG | - | chr2_3:21789857-21789876 | Msa0283990:three_prime_UTR | 30.0% | |
| AGAGATAGAGAGAAAGAAAA+GGG | + | chr2_3:21789905-21789924 | None:intergenic | 30.0% | |
| TCAGGGTTTATTCAGAATTA+GGG | + | chr2_3:21790254-21790273 | None:intergenic | 30.0% | |
| ATCAGGGTTTATTCAGAATT+AGG | + | chr2_3:21790255-21790274 | None:intergenic | 30.0% | |
| !! | TAGGGGTTTTATCAAAATCA+GGG | + | chr2_3:21790271-21790290 | None:intergenic | 30.0% |
| !! | TTAGGGGTTTTATCAAAATC+AGG | + | chr2_3:21790272-21790291 | None:intergenic | 30.0% |
| TAGGGGTTTATCAAAATTAG+GGG | + | chr2_3:21790288-21790307 | None:intergenic | 30.0% | |
| TCAGACCCAAAACAAAATTA+GGG | + | chr2_3:21790327-21790346 | None:intergenic | 30.0% | |
| GTGTGTTGTAAATGCTTAAT+TGG | - | chr2_3:21790537-21790556 | Msa0283990:intron | 30.0% | |
| ATCCAATAAACGATACACAT+AGG | + | chr2_3:21790575-21790594 | None:intergenic | 30.0% | |
| ! | CAGTAATAATGTGAGTATTG+GGG | + | chr2_3:21790710-21790729 | None:intergenic | 30.0% |
| GACAGTAATAATGTGAGTAT+TGG | + | chr2_3:21790712-21790731 | None:intergenic | 30.0% | |
| ! | TTAGTAGTCAGTGTCTTTTA+TGG | - | chr2_3:21790839-21790858 | Msa0283990:CDS | 30.0% |
| ACCTACAAGATATAAAGTCA+GGG | + | chr2_3:21791122-21791141 | None:intergenic | 30.0% | |
| TACCTACAAGATATAAAGTC+AGG | + | chr2_3:21791123-21791142 | None:intergenic | 30.0% | |
| TAAGATACCTTTGTGTACAA+TGG | + | chr2_3:21791438-21791457 | None:intergenic | 30.0% | |
| !! | TTGTACACAAAGGTATCTTA+AGG | - | chr2_3:21791438-21791457 | Msa0283990:intron | 30.0% |
| ACTTCTTACTCTTAAATGCT+CGG | - | chr2_3:21791963-21791982 | Msa0283990:CDS | 30.0% | |
| AGTTTCTCAAAGATATCAAG+TGG | - | chr2_3:21792074-21792093 | Msa0283990:intron | 30.0% | |
| CTATATTGGAGAAAGCAATT+GGG | - | chr2_3:21792209-21792228 | Msa0283990:intron | 30.0% | |
| !!! | CTATTAGTTTTGGTCAAAAG+TGG | - | chr2_3:21792263-21792282 | Msa0283990:intron | 30.0% |
| !! | TTGCTTCATTTTGCTTTTAC+AGG | - | chr2_3:21792312-21792331 | Msa0283990:CDS | 30.0% |
| TTTACAGGACTGAAATTCAA+TGG | - | chr2_3:21792327-21792346 | Msa0283990:CDS | 30.0% | |
| !! | CAAGTTTCAGTTTTGGTAAT+TGG | + | chr2_3:21792422-21792441 | None:intergenic | 30.0% |
| TGAAGACATTGATGAAGATA+TGG | - | chr2_3:21792490-21792509 | Msa0283990:intron | 30.0% | |
| ACATTGATGAAGATATGGTA+TGG | - | chr2_3:21792495-21792514 | Msa0283990:intron | 30.0% | |
| ! | ATGAATTTTCATGCTTCTTC+AGG | - | chr2_3:21792717-21792736 | Msa0283990:intron | 30.0% |
| !! | TCATACCTTCTTTTTAGTCT+TGG | + | chr2_3:21792924-21792943 | None:intergenic | 30.0% |
| TTCCAAAGGAAATTAACATG+GGG | + | chr2_3:21793040-21793059 | None:intergenic | 30.0% | |
| GTTCCAAAGGAAATTAACAT+GGG | + | chr2_3:21793041-21793060 | None:intergenic | 30.0% | |
| ! | TATAGACACTTCCTTCATTT+TGG | - | chr2_3:21793113-21793132 | Msa0283990:intron | 30.0% |
| AGCAAACAAATCCAAAATGA+AGG | + | chr2_3:21793127-21793146 | None:intergenic | 30.0% | |
| TAAATTCATGAAGCCAAAAG+TGG | + | chr2_3:21793186-21793205 | None:intergenic | 30.0% | |
| !! | AATTGCAATCCTTTTTCATC+AGG | + | chr2_3:21793606-21793625 | None:intergenic | 30.0% |
| AAAAGGATTGCAATTTCATG+TGG | - | chr2_3:21793611-21793630 | Msa0283990:CDS | 30.0% | |
| ! | CAATTTCATGTGGTTTTTCA+TGG | - | chr2_3:21793621-21793640 | Msa0283990:intron | 30.0% |
| !!! | CTTTTTTATCTCCCTACTTT+TGG | - | chr2_3:21793702-21793721 | Msa0283990:intron | 30.0% |
| AGCACAAACTTTAAGTATCT+GGG | + | chr2_3:21793791-21793810 | None:intergenic | 30.0% | |
| AAGCACAAACTTTAAGTATC+TGG | + | chr2_3:21793792-21793811 | None:intergenic | 30.0% | |
| TCTGAGTTTACCAGAAATAT+TGG | + | chr2_3:21793823-21793842 | None:intergenic | 30.0% | |
| !! | TATTTCTGGTAAACTCAGAT+TGG | - | chr2_3:21793824-21793843 | Msa0283990:five_prime_UTR | 30.0% |
| ! | AATGCTACAAGTTTTTGTGT+GGG | - | chr2_3:21793853-21793872 | Msa0283990:five_prime_UTR | 30.0% |
| TTAAAAGGGAGAGGAAACAT+AGG | - | chr2_3:21789839-21789858 | Msa0283990:three_prime_UTR | 35.0% | |
| GAGAGATAGAGAGAAAGAAA+AGG | + | chr2_3:21789906-21789925 | None:intergenic | 35.0% | |
| ACAATGACTACCAACAAAGA+AGG | - | chr2_3:21789958-21789977 | Msa0283990:three_prime_UTR | 35.0% | |
| GATGTTGAAACCTTCTTTGT+TGG | + | chr2_3:21789971-21789990 | None:intergenic | 35.0% | |
| CTCAGACCCAAAACAAAATT+AGG | + | chr2_3:21790328-21790347 | None:intergenic | 35.0% | |
| CAATAAACGATACACATAGG+AGG | + | chr2_3:21790572-21790591 | None:intergenic | 35.0% | |
| CTCCTATGTGTATCGTTTAT+TGG | - | chr2_3:21790570-21790589 | Msa0283990:intron | 35.0% | |
| AGTGTGAAGTGAGAAGTTAA+AGG | - | chr2_3:21790610-21790629 | Msa0283990:intron | 35.0% | |
| GTGTGAAGTGAGAAGTTAAA+GGG | - | chr2_3:21790611-21790630 | Msa0283990:intron | 35.0% | |
| TTATCGCTTGGGAATCTATT+TGG | - | chr2_3:21791030-21791049 | Msa0283990:intron | 35.0% | |
| ACCCTGACTTTATATCTTGT+AGG | - | chr2_3:21791118-21791137 | Msa0283990:CDS | 35.0% | |
| TTTCAGAAGACAATATCACG+CGG | + | chr2_3:21791318-21791337 | None:intergenic | 35.0% | |
| ! | TGAATTGGAGGCTAAGTTTT+TGG | - | chr2_3:21791368-21791387 | Msa0283990:CDS | 35.0% |
| GTATCAACCATTGTACACAA+AGG | - | chr2_3:21791428-21791447 | Msa0283990:intron | 35.0% | |
| AAGAGGACAATGGTAGTAAT+TGG | - | chr2_3:21791783-21791802 | Msa0283990:intron | 35.0% | |
| AGAGGACAATGGTAGTAATT+GGG | - | chr2_3:21791784-21791803 | Msa0283990:intron | 35.0% | |
| !!! | CTTTTGACTTATGCAGAGAA+AGG | - | chr2_3:21791858-21791877 | Msa0283990:intron | 35.0% |
| ! | AGAAAGGAGTTCCTTCATTT+TGG | - | chr2_3:21791874-21791893 | Msa0283990:intron | 35.0% |
| ! | ATAGCATTGAGCCAAAATGA+AGG | + | chr2_3:21791888-21791907 | None:intergenic | 35.0% |
| CTTCTTACTCTTAAATGCTC+GGG | - | chr2_3:21791964-21791983 | Msa0283990:CDS | 35.0% | |
| !!! | TCTTAAATGCTCGGGTTTTT+TGG | - | chr2_3:21791972-21791991 | Msa0283990:CDS | 35.0% |
| CTTGACGAAGACATATCATA+TGG | - | chr2_3:21792171-21792190 | Msa0283990:intron | 35.0% | |
| ! | GACATATCATATGGTTGATG+AGG | - | chr2_3:21792180-21792199 | Msa0283990:intron | 35.0% |
| TGATGAGGATGAACCTATAT+TGG | - | chr2_3:21792195-21792214 | Msa0283990:intron | 35.0% | |
| CCAATTGCTTTCTCCAATAT+AGG | + | chr2_3:21792211-21792230 | None:intergenic | 35.0% | |
| CCTATATTGGAGAAAGCAAT+TGG | - | chr2_3:21792208-21792227 | Msa0283990:intron | 35.0% | |
| !! | TCATTTTTACCTGTTGCTGT+TGG | - | chr2_3:21792240-21792259 | Msa0283990:intron | 35.0% |
| !! | TTGCTGTTGGCTATTAGTTT+TGG | - | chr2_3:21792253-21792272 | Msa0283990:intron | 35.0% |
| ! | TTTTGTGTCAAGCATTTTCC+AGG | + | chr2_3:21792356-21792375 | None:intergenic | 35.0% |
| TGGAAAATGCTTGACACAAA+AGG | - | chr2_3:21792355-21792374 | Msa0283990:CDS | 35.0% | |
| TTTGAAGAAAAAGCCCAAGA+AGG | - | chr2_3:21792379-21792398 | Msa0283990:intron | 35.0% | |
| TTGAAGAAAAAGCCCAAGAA+GGG | - | chr2_3:21792380-21792399 | Msa0283990:intron | 35.0% | |
| ! | GCTTTCACAAGTTTCAGTTT+TGG | + | chr2_3:21792429-21792448 | None:intergenic | 35.0% |
| CAATGTCTTCATCATCTTCA+GGG | + | chr2_3:21792481-21792500 | None:intergenic | 35.0% | |
| TCAATGTCTTCATCATCTTC+AGG | + | chr2_3:21792482-21792501 | None:intergenic | 35.0% | |
| TGATGAAGATATGGTATGGA+AGG | - | chr2_3:21792499-21792518 | Msa0283990:intron | 35.0% | |
| AGTAAACCATGATACAGCAT+GGG | + | chr2_3:21792768-21792787 | None:intergenic | 35.0% | |
| CGTTCCAAAGGAAATTAACA+TGG | + | chr2_3:21793042-21793061 | None:intergenic | 35.0% | |
| GTACCCATATCAAAATCAGT+GGG | - | chr2_3:21793210-21793229 | Msa0283990:intron | 35.0% | |
| !! | AGGAGTTTTGTAAAGAGTGT+TGG | - | chr2_3:21793256-21793275 | Msa0283990:CDS | 35.0% |
| ! | TTGAATTCTGCTGTGCTATT+GGG | + | chr2_3:21793297-21793316 | None:intergenic | 35.0% |
| TTTGAATTCTGCTGTGCTAT+TGG | + | chr2_3:21793298-21793317 | None:intergenic | 35.0% | |
| ATTGTATGCTTTCAGAAGAG+CGG | - | chr2_3:21793468-21793487 | Msa0283990:intron | 35.0% | |
| !! | AGCAGCAATAGTTTGTTTCT+TGG | - | chr2_3:21793541-21793560 | Msa0283990:intron | 35.0% |
| !! | GCAGCAATAGTTTGTTTCTT+GGG | - | chr2_3:21793542-21793561 | Msa0283990:intron | 35.0% |
| ! | TATGCTGCTGAAAGTTGTTT+TGG | - | chr2_3:21793570-21793589 | Msa0283990:intron | 35.0% |
| !! | ATGCTGCTGAAAGTTGTTTT+GGG | - | chr2_3:21793571-21793590 | Msa0283990:intron | 35.0% |
| AGGGTAGGAAAATGAATCAA+GGG | + | chr2_3:21793647-21793666 | None:intergenic | 35.0% | |
| AAGGGTAGGAAAATGAATCA+AGG | + | chr2_3:21793648-21793667 | None:intergenic | 35.0% | |
| CAGACTATAAAACTAAGGGT+AGG | + | chr2_3:21793662-21793681 | None:intergenic | 35.0% | |
| AACAACCATCTCCAAAAGTA+GGG | + | chr2_3:21793716-21793735 | None:intergenic | 35.0% | |
| TAACAACCATCTCCAAAAGT+AGG | + | chr2_3:21793717-21793736 | None:intergenic | 35.0% | |
| GATGGTTGTTATATAGTCAG+TGG | - | chr2_3:21793726-21793745 | Msa0283990:intron | 35.0% | |
| !! | TCAGTGGTGTTGTGATTTAT+TGG | - | chr2_3:21793742-21793761 | Msa0283990:CDS | 35.0% |
| ! | CAATGCTACAAGTTTTTGTG+TGG | - | chr2_3:21793852-21793871 | Msa0283990:five_prime_UTR | 35.0% |
| AAAAAAGGAAGAGAGGGAGA+AGG | - | chr2_3:21789812-21789831 | Msa0283990:three_prime_UTR | 40.0% | |
| AAAAAGGAAGAGAGGGAGAA+GGG | - | chr2_3:21789813-21789832 | Msa0283990:three_prime_UTR | 40.0% | |
| !! | AGGGAGAAGGGCATTTAAAA+GGG | - | chr2_3:21789825-21789844 | Msa0283990:three_prime_UTR | 40.0% |
| GAAGAAAGTGACAGCGAAAA+AGG | + | chr2_3:21789928-21789947 | None:intergenic | 40.0% | |
| GGTAGTCATTGTTGAGAAAG+AGG | + | chr2_3:21789950-21789969 | None:intergenic | 40.0% | |
| !! | CGAGTGTTGATTGAGAAGAA+GGG | + | chr2_3:21790016-21790035 | None:intergenic | 40.0% |
| !! | ACGAGTGTTGATTGAGAAGA+AGG | + | chr2_3:21790017-21790036 | None:intergenic | 40.0% |
| CTTTGTAGCTCTCAATGAAG+AGG | - | chr2_3:21790090-21790109 | Msa0283990:three_prime_UTR | 40.0% | |
| AGTAAGATTCAGAGTCTTGC+TGG | - | chr2_3:21790411-21790430 | Msa0283990:intron | 40.0% | |
| GGATTGATCCTTCTGTTACA+TGG | - | chr2_3:21790756-21790775 | Msa0283990:intron | 40.0% | |
| GATCCTTCTGTTACATGGAT+TGG | - | chr2_3:21790761-21790780 | Msa0283990:intron | 40.0% | |
| TCTCCAATCCATGTAACAGA+AGG | + | chr2_3:21790767-21790786 | None:intergenic | 40.0% | |
| GATCCTCTATTCAGTCACAT+GGG | - | chr2_3:21790897-21790916 | Msa0283990:CDS | 40.0% | |
| ATCCTCTATTCAGTCACATG+GGG | - | chr2_3:21790898-21790917 | Msa0283990:CDS | 40.0% | |
| TTTGCTACCCAGCAAAGATA+AGG | - | chr2_3:21791289-21791308 | Msa0283990:CDS | 40.0% | |
| ACAGGGAGAACATGATGAAT+TGG | - | chr2_3:21791353-21791372 | Msa0283990:CDS | 40.0% | |
| !! | ATTGGAGGCTAAGTTTTTGG+AGG | - | chr2_3:21791371-21791390 | Msa0283990:CDS | 40.0% |
| CAGCGATATGACATTGTGAA+TGG | - | chr2_3:21791713-21791732 | Msa0283990:intron | 40.0% | |
| CAATGACGTGTTATCTGAAG+AGG | - | chr2_3:21791914-21791933 | Msa0283990:intron | 40.0% | |
| ACCTAGTTCGTAGAGAAGAA+GGG | + | chr2_3:21792028-21792047 | None:intergenic | 40.0% | |
| AACCTAGTTCGTAGAGAAGA+AGG | + | chr2_3:21792029-21792048 | None:intergenic | 40.0% | |
| CTTCTCTACGAACTAGGTTA+CGG | - | chr2_3:21792030-21792049 | Msa0283990:intron | 40.0% | |
| TCAAAGATATCAAGTGGAGC+AGG | - | chr2_3:21792080-21792099 | Msa0283990:intron | 40.0% | |
| AACTCAAGCTTGAACCCTTT+CGG | + | chr2_3:21792115-21792134 | None:intergenic | 40.0% | |
| AACTAATAGCCAACAGCAAC+AGG | + | chr2_3:21792252-21792271 | None:intergenic | 40.0% | |
| ACTGAAATTCAATGGCTTCC+TGG | - | chr2_3:21792335-21792354 | Msa0283990:CDS | 40.0% | |
| TGAGGAACTTCAGAATCAGA+TGG | - | chr2_3:21792592-21792611 | Msa0283990:intron | 40.0% | |
| ACTTCAGAATCAGATGGAAC+AGG | - | chr2_3:21792598-21792617 | Msa0283990:intron | 40.0% | |
| TAAACCATGATACAGCATGG+GGG | + | chr2_3:21792766-21792785 | None:intergenic | 40.0% | |
| GTAAACCATGATACAGCATG+GGG | + | chr2_3:21792767-21792786 | None:intergenic | 40.0% | |
| CAGTAAACCATGATACAGCA+TGG | + | chr2_3:21792769-21792788 | None:intergenic | 40.0% | |
| CATGCTGTATCATGGTTTAC+TGG | - | chr2_3:21792767-21792786 | Msa0283990:intron | 40.0% | |
| TGTATCATGGTTTACTGGAG+AGG | - | chr2_3:21792772-21792791 | Msa0283990:intron | 40.0% | |
| GGAGACCAAGACTAAAAAGA+AGG | - | chr2_3:21792916-21792935 | Msa0283990:intron | 40.0% | |
| AAAGGAAATTAACATGGGGC+AGG | + | chr2_3:21793036-21793055 | None:intergenic | 40.0% | |
| TGCCCCATGTTAATTTCCTT+TGG | - | chr2_3:21793035-21793054 | Msa0283990:intron | 40.0% | |
| TGCTCGATGCTATATTGCTA+AGG | - | chr2_3:21793143-21793162 | Msa0283990:intron | 40.0% | |
| ! | TTACCAACACACTCCACTTT+TGG | - | chr2_3:21793170-21793189 | Msa0283990:intron | 40.0% |
| GGTACCCATATCAAAATCAG+TGG | - | chr2_3:21793209-21793228 | Msa0283990:intron | 40.0% | |
| !!! | GGTCCCACTGATTTTGATAT+GGG | + | chr2_3:21793216-21793235 | None:intergenic | 40.0% |
| !!! | TGGTCCCACTGATTTTGATA+TGG | + | chr2_3:21793217-21793236 | None:intergenic | 40.0% |
| !! | TACATGGTGCTGTCAAATAG+TGG | - | chr2_3:21793339-21793358 | Msa0283990:intron | 40.0% |
| AAATTGAACGTCCAAAGCCA+TGG | + | chr2_3:21793432-21793451 | None:intergenic | 40.0% | |
| !! | TGCTGCTGAAAGTTGTTTTG+GGG | - | chr2_3:21793572-21793591 | Msa0283990:intron | 40.0% |
| !! | ATCCTTTTTCATCAGGCACT+AGG | + | chr2_3:21793599-21793618 | None:intergenic | 40.0% |
| !! | TATCTCCCTACTTTTGGAGA+TGG | - | chr2_3:21793708-21793727 | Msa0283990:intron | 40.0% |
| !! | GAGGGAGAAGGGCATTTAAA+AGG | - | chr2_3:21789824-21789843 | Msa0283990:three_prime_UTR | 45.0% |
| !! | GAAGGGCATTTAAAAGGGAG+AGG | - | chr2_3:21789830-21789849 | Msa0283990:three_prime_UTR | 45.0% |
| AACATCGCAGATCTCAGTTC+TGG | - | chr2_3:21789985-21790004 | Msa0283990:three_prime_UTR | 45.0% | |
| TGACCTAGTTAACGCTCTCA+AGG | - | chr2_3:21790120-21790139 | Msa0283990:three_prime_UTR | 45.0% | |
| !! | GAACCTTGAGAGCGTTAACT+AGG | + | chr2_3:21790126-21790145 | None:intergenic | 45.0% |
| TGAGGTTCTCAGAGAGATTC+AGG | - | chr2_3:21790485-21790504 | Msa0283990:intron | 45.0% | |
| TGAATAGAGGATCGCAGTTC+AGG | + | chr2_3:21790890-21790909 | None:intergenic | 45.0% | |
| CGATCCTCTATTCAGTCACA+TGG | - | chr2_3:21790896-21790915 | Msa0283990:CDS | 45.0% | |
| AAGAGCCTCAGGGTAACAAT+TGG | + | chr2_3:21790930-21790949 | None:intergenic | 45.0% | |
| ! | TAACTTGCAGAAGAGCCTCA+GGG | + | chr2_3:21790940-21790959 | None:intergenic | 45.0% |
| ! | ATAACTTGCAGAAGAGCCTC+AGG | + | chr2_3:21790941-21790960 | None:intergenic | 45.0% |
| GCGGAAACCTTATCTTTGCT+GGG | + | chr2_3:21791299-21791318 | None:intergenic | 45.0% | |
| GGGAGAACATGATGAATTGG+AGG | - | chr2_3:21791356-21791375 | Msa0283990:CDS | 45.0% | |
| !! | TGTGAATGGTGTCACTGAAG+TGG | - | chr2_3:21791727-21791746 | Msa0283990:intron | 45.0% |
| !! | AATGGTGTCACTGAAGTGGA+AGG | - | chr2_3:21791731-21791750 | Msa0283990:intron | 45.0% |
| !! | ATGGTGTCACTGAAGTGGAA+GGG | - | chr2_3:21791732-21791751 | Msa0283990:intron | 45.0% |
| AACTACAGCTGATGCAGAAG+AGG | - | chr2_3:21791766-21791785 | Msa0283990:intron | 45.0% | |
| CCTAGTTCGTAGAGAAGAAG+GGG | + | chr2_3:21792027-21792046 | None:intergenic | 45.0% | |
| ACTCAAGCTTGAACCCTTTC+GGG | + | chr2_3:21792114-21792133 | None:intergenic | 45.0% | |
| GAGAAAGCAATTGGGTAAGC+TGG | - | chr2_3:21792217-21792236 | Msa0283990:intron | 45.0% | |
| GCATTCTTTGCACCCTTCTT+GGG | + | chr2_3:21792395-21792414 | None:intergenic | 45.0% | |
| AGCATTCTTTGCACCCTTCT+TGG | + | chr2_3:21792396-21792415 | None:intergenic | 45.0% | |
| TCATCATCTTCAGGGACTTC+TGG | + | chr2_3:21792473-21792492 | None:intergenic | 45.0% | |
| ATGGAACAGGACTACGACAT+TGG | - | chr2_3:21792611-21792630 | Msa0283990:intron | 45.0% | |
| TGGAACAGGACTACGACATT+GGG | - | chr2_3:21792612-21792631 | Msa0283990:intron | 45.0% | |
| ! | TGAGGATGATGATGAAGACG+AGG | - | chr2_3:21792856-21792875 | Msa0283990:intron | 45.0% |
| AAGCCAAAAGTGGAGTGTGT+TGG | + | chr2_3:21793176-21793195 | None:intergenic | 45.0% | |
| ! | AACTATTGCTGCTTGCACTC+TGG | + | chr2_3:21793534-21793553 | None:intergenic | 45.0% |
| GTCCTAGTGCCTGATGAAAA+AGG | - | chr2_3:21793594-21793613 | Msa0283990:CDS | 45.0% | |
| GTTAACGCTCTCAAGGTTCG+TGG | - | chr2_3:21790127-21790146 | Msa0283990:three_prime_UTR | 50.0% | |
| AGAGTCTATCCCCTGTTGTC+AGG | - | chr2_3:21790454-21790473 | Msa0283990:intron | 50.0% | |
| AACACGCTTCCTGACAACAG+GGG | + | chr2_3:21790466-21790485 | None:intergenic | 50.0% | |
| CAACACGCTTCCTGACAACA+GGG | + | chr2_3:21790467-21790486 | None:intergenic | 50.0% | |
| TCAACACGCTTCCTGACAAC+AGG | + | chr2_3:21790468-21790487 | None:intergenic | 50.0% | |
| ! | TGTTGTCAGGAAGCGTGTTG+AGG | - | chr2_3:21790467-21790486 | Msa0283990:intron | 50.0% |
| GACCCCATGTGACTGAATAG+AGG | + | chr2_3:21790903-21790922 | None:intergenic | 50.0% | |
| AGCCTCAGGGTAACAATTGG+AGG | + | chr2_3:21790927-21790946 | None:intergenic | 50.0% | |
| CGCGGAAACCTTATCTTTGC+TGG | + | chr2_3:21791300-21791319 | None:intergenic | 50.0% | |
| !! | TGGTGTCACTGAAGTGGAAG+GGG | - | chr2_3:21791733-21791752 | Msa0283990:intron | 50.0% |
| GCTGATGCAGAAGAGGACAA+TGG | - | chr2_3:21791773-21791792 | Msa0283990:intron | 50.0% | |
| CCCCTTCTTCTCTACGAACT+AGG | - | chr2_3:21792024-21792043 | Msa0283990:intron | 50.0% | |
| TCATCTTCAGGGACTTCTGG+TGG | + | chr2_3:21792470-21792489 | None:intergenic | 50.0% | |
| TCATCCCCCATGCTGTATCA+TGG | - | chr2_3:21792759-21792778 | Msa0283990:intron | 50.0% | |
| TTTACTGGAGAGGCTGCTCA+GGG | - | chr2_3:21792782-21792801 | Msa0283990:intron | 50.0% | |
| AGACCTGGATGACGAAGATG+AGG | - | chr2_3:21792817-21792836 | Msa0283990:intron | 50.0% | |
| CATCCTCATCTTCGTCATCC+AGG | + | chr2_3:21792823-21792842 | None:intergenic | 50.0% | |
| GGATGAAGACGATGATGCTG+AGG | - | chr2_3:21792838-21792857 | Msa0283990:intron | 50.0% | |
| ! | TGATGATGAAGACGAGGACG+AGG | - | chr2_3:21792862-21792881 | Msa0283990:intron | 50.0% |
| CGAAGACGACGATGAAGATG+AGG | - | chr2_3:21792892-21792911 | Msa0283990:intron | 50.0% | |
| AGACGACGATGAAGATGAGG+AGG | - | chr2_3:21792895-21792914 | Msa0283990:intron | 50.0% | |
| GGAAATTAACATGGGGCAGG+TGG | + | chr2_3:21793033-21793052 | None:intergenic | 50.0% | |
| TGACTGCAGCAACGTTCCAA+AGG | + | chr2_3:21793054-21793073 | None:intergenic | 50.0% | |
| GTTGCTGCAGTCATCTGCTA+AGG | - | chr2_3:21793061-21793080 | Msa0283990:intron | 50.0% | |
| TGTGATTGACAGCACCTCCA+TGG | - | chr2_3:21793412-21793431 | Msa0283990:intron | 50.0% | |
| TTGAACGTCCAAAGCCATGG+AGG | + | chr2_3:21793429-21793448 | None:intergenic | 50.0% | |
| AAGAGCGGAATAGCTCAGCT+TGG | - | chr2_3:21793483-21793502 | Msa0283990:intron | 50.0% | |
| ! | GGAATAGCTCAGCTTGGTGA+GGG | - | chr2_3:21793489-21793508 | Msa0283990:intron | 50.0% |
| ! | TATTGCTGCTTGCACTCTGG+TGG | + | chr2_3:21793531-21793550 | None:intergenic | 50.0% |
| CGCCTCCAATTGTTACCCTG+AGG | - | chr2_3:21790922-21790941 | Msa0283990:CDS | 55.0% | |
| AGCAGGATCGATGACCCGAA+AGG | - | chr2_3:21792097-21792116 | Msa0283990:intron | 55.0% | |
| GCAGGATCGATGACCCGAAA+GGG | - | chr2_3:21792098-21792117 | Msa0283990:intron | 55.0% | |
| GTTTACTGGAGAGGCTGCTC+AGG | - | chr2_3:21792781-21792800 | Msa0283990:intron | 55.0% | |
| TTACTGGAGAGGCTGCTCAG+GGG | - | chr2_3:21792783-21792802 | Msa0283990:intron | 55.0% | |
| TGAAGACGAGGACGAGGATG+AGG | - | chr2_3:21792868-21792887 | Msa0283990:intron | 55.0% | |
| ! | GCTGTGCTATTGGGCAGCTA+TGG | + | chr2_3:21793288-21793307 | None:intergenic | 55.0% |
| TGACAGCACCTCCATGGCTT+TGG | - | chr2_3:21793418-21793437 | Msa0283990:intron | 55.0% | |
| ! | CGGAATAGCTCAGCTTGGTG+AGG | - | chr2_3:21793488-21793507 | Msa0283990:intron | 55.0% |
| TGAAGTGGAAGGGGCAGCAG+TGG | - | chr2_3:21791742-21791761 | Msa0283990:intron | 60.0% | |
| TACTGGAGAGGCTGCTCAGG+GGG | - | chr2_3:21792784-21792803 | Msa0283990:intron | 60.0% | |
| ! | TCAGCTTGGTGAGGGTCAGC+AGG | - | chr2_3:21793497-21793516 | Msa0283990:intron | 60.0% |
| ! | CAGCTTGGTGAGGGTCAGCA+GGG | - | chr2_3:21793498-21793517 | Msa0283990:intron | 60.0% |
| GCTGCTCAGGGGGAGGAGTT+TGG | - | chr2_3:21792794-21792813 | Msa0283990:intron | 65.0% | |
| GGGGGAGGAGTTTGGAGACC+TGG | - | chr2_3:21792802-21792821 | Msa0283990:intron | 65.0% | |
| TGGAGAGGCTGCTCAGGGGG+AGG | - | chr2_3:21792787-21792806 | Msa0283990:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 21789805 | 21793928 | 21789805 | ID=Msa0283990;Name=Msa0283990 |
| chr2_3 | mRNA | 21789805 | 21793928 | 21789805 | ID=Msa0283990-mRNA-1;Parent=Msa0283990;Name=Msa0283990-mRNA-1;_AED=0.07;_eAED=0.07;_QI=156|0.9|0.90|1|0.9|0.90|11|420|355 |
| chr2_3 | exon | 21789805 | 21790263 | 21789805 | ID=Msa0283990-mRNA-1:exon:8536;Parent=Msa0283990-mRNA-1 |
| chr2_3 | exon | 21790796 | 21790994 | 21790796 | ID=Msa0283990-mRNA-1:exon:8535;Parent=Msa0283990-mRNA-1 |
| chr2_3 | exon | 21791100 | 21791143 | 21791100 | ID=Msa0283990-mRNA-1:exon:8534;Parent=Msa0283990-mRNA-1 |
| chr2_3 | exon | 21791222 | 21791399 | 21791222 | ID=Msa0283990-mRNA-1:exon:8533;Parent=Msa0283990-mRNA-1 |
| chr2_3 | exon | 21791503 | 21791687 | 21791503 | ID=Msa0283990-mRNA-1:exon:8532;Parent=Msa0283990-mRNA-1 |
| chr2_3 | exon | 21791798 | 21791859 | 21791798 | ID=Msa0283990-mRNA-1:exon:8531;Parent=Msa0283990-mRNA-1 |
| chr2_3 | exon | 21791936 | 21792017 | 21791936 | ID=Msa0283990-mRNA-1:exon:8530;Parent=Msa0283990-mRNA-1 |
| chr2_3 | exon | 21792284 | 21792376 | 21792284 | ID=Msa0283990-mRNA-1:exon:8529;Parent=Msa0283990-mRNA-1 |
| chr2_3 | exon | 21793227 | 21793322 | 21793227 | ID=Msa0283990-mRNA-1:exon:8528;Parent=Msa0283990-mRNA-1 |
| chr2_3 | exon | 21793592 | 21793635 | 21793592 | ID=Msa0283990-mRNA-1:exon:8527;Parent=Msa0283990-mRNA-1 |
| chr2_3 | exon | 21793727 | 21793928 | 21793727 | ID=Msa0283990-mRNA-1:exon:8526;Parent=Msa0283990-mRNA-1 |
| chr2_3 | five_prime_UTR | 21793773 | 21793928 | 21793773 | ID=Msa0283990-mRNA-1:five_prime_utr;Parent=Msa0283990-mRNA-1 |
| chr2_3 | CDS | 21793727 | 21793772 | 21793727 | ID=Msa0283990-mRNA-1:cds;Parent=Msa0283990-mRNA-1 |
| chr2_3 | CDS | 21793592 | 21793635 | 21793592 | ID=Msa0283990-mRNA-1:cds;Parent=Msa0283990-mRNA-1 |
| chr2_3 | CDS | 21793227 | 21793322 | 21793227 | ID=Msa0283990-mRNA-1:cds;Parent=Msa0283990-mRNA-1 |
| chr2_3 | CDS | 21792284 | 21792376 | 21792284 | ID=Msa0283990-mRNA-1:cds;Parent=Msa0283990-mRNA-1 |
| chr2_3 | CDS | 21791936 | 21792017 | 21791936 | ID=Msa0283990-mRNA-1:cds;Parent=Msa0283990-mRNA-1 |
| chr2_3 | CDS | 21791798 | 21791859 | 21791798 | ID=Msa0283990-mRNA-1:cds;Parent=Msa0283990-mRNA-1 |
| chr2_3 | CDS | 21791503 | 21791687 | 21791503 | ID=Msa0283990-mRNA-1:cds;Parent=Msa0283990-mRNA-1 |
| chr2_3 | CDS | 21791222 | 21791399 | 21791222 | ID=Msa0283990-mRNA-1:cds;Parent=Msa0283990-mRNA-1 |
| chr2_3 | CDS | 21791100 | 21791143 | 21791100 | ID=Msa0283990-mRNA-1:cds;Parent=Msa0283990-mRNA-1 |
| chr2_3 | CDS | 21790796 | 21790994 | 21790796 | ID=Msa0283990-mRNA-1:cds;Parent=Msa0283990-mRNA-1 |
| chr2_3 | CDS | 21790225 | 21790263 | 21790225 | ID=Msa0283990-mRNA-1:cds;Parent=Msa0283990-mRNA-1 |
| chr2_3 | three_prime_UTR | 21789805 | 21790224 | 21789805 | ID=Msa0283990-mRNA-1:three_prime_utr;Parent=Msa0283990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
