Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0561030 | A0A2P5AQL0 | 39.175 | 97 | 59 | 0 | 66 | 162 | 7 | 103 | 5.81e-11 | 66.6 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0561030 | Msa0615190 | 0.853586 | 2.167123e-61 | -8.615850e-47 |
| Msa0561030 | Msa0698180 | 0.840425 | 8.764327e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 44 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATCGGTTCTTTACCTTTA+TGG | 0.132034 | 4_1:-60451970 | None:intergenic |
| AATCGGTTCTTTACCTTTAT+GGG | 0.198752 | 4_1:-60451969 | None:intergenic |
| CACCCGGAAAACCAAGATTT+TGG | 0.227676 | 4_1:+60452511 | Msa0561030:CDS |
| GTTTCAAGTGGTTCGTCTTT+CGG | 0.292602 | 4_1:+60451943 | Msa0561030:CDS |
| GTGAGATCAAGGATGATAAA+TGG | 0.304625 | 4_1:+60452633 | Msa0561030:CDS |
| ATATTTCAAGCCTTGTTTCT+TGG | 0.305951 | 4_1:-60452081 | None:intergenic |
| GGAACCTTGGTTCGTAAATT+CGG | 0.334327 | 4_1:-60452438 | None:intergenic |
| GGATTCGAATCTGCAGGTTA+TGG | 0.348552 | 4_1:+60452703 | Msa0561030:CDS |
| CTCTGAAGTTTGTGAGATCA+AGG | 0.366703 | 4_1:+60452622 | Msa0561030:CDS |
| CGTCTTTCGGAAACCCATAA+AGG | 0.375701 | 4_1:+60451956 | Msa0561030:CDS |
| CACATCAGTGGCGGCGGCTA+TGG | 0.400837 | 4_1:-60452459 | None:intergenic |
| CAAGAGAAGTTTCCTGAGCT+TGG | 0.412203 | 4_1:-60452030 | None:intergenic |
| AAGATTGTGTTGAGATGAGT+TGG | 0.428995 | 4_1:-60451996 | None:intergenic |
| GAAGTTTCCTGAGCTTGGTT+TGG | 0.437875 | 4_1:-60452025 | None:intergenic |
| TTTCAAGCCTTGTTTCTTGG+AGG | 0.440275 | 4_1:-60452078 | None:intergenic |
| CAAAGTCATGGCCACCGCTT+CGG | 0.450183 | 4_1:+60452682 | Msa0561030:CDS |
| AAGCGGTGGCCATGACTTTG+AGG | 0.450822 | 4_1:-60452679 | None:intergenic |
| TGAGATCAAGGATGATAAAT+GGG | 0.474438 | 4_1:+60452634 | Msa0561030:CDS |
| GGTGGTGAATGTCCTACTAT+AGG | 0.479825 | 4_1:-60452492 | None:intergenic |
| AGAACAGCTTGGGTTCAATC+TGG | 0.484147 | 4_1:-60452576 | None:intergenic |
| TGTAGAAAGCAGAACAGCTT+GGG | 0.494574 | 4_1:-60452586 | None:intergenic |
| TGAGATGAGTTGGGTTGAAT+CGG | 0.513533 | 4_1:-60451986 | None:intergenic |
| GTTCAATCTGGTGCAACAAT+TGG | 0.515144 | 4_1:-60452564 | None:intergenic |
| AGATTGTGTTGAGATGAGTT+GGG | 0.523370 | 4_1:-60451995 | None:intergenic |
| TCTCTAACCAAACCAAGCTC+AGG | 0.524526 | 4_1:+60452018 | Msa0561030:CDS |
| CTGTTGAGCAACGTTTCAAG+TGG | 0.530743 | 4_1:+60451931 | Msa0561030:CDS |
| CGCTTCGGATTCGAATCTGC+AGG | 0.531779 | 4_1:+60452697 | Msa0561030:CDS |
| AGCGGTGGCCATGACTTTGA+GGG | 0.532159 | 4_1:-60452678 | None:intergenic |
| AAATGGGACTTCAGAAACAT+AGG | 0.536814 | 4_1:+60452650 | Msa0561030:CDS |
| TGTCCACCAACACCTATAGT+AGG | 0.545211 | 4_1:+60452480 | Msa0561030:CDS |
| TGGCGGCGGCTATGGAACCT+TGG | 0.554368 | 4_1:-60452451 | None:intergenic |
| GGTGGACACATCAGTGGCGG+CGG | 0.558776 | 4_1:-60452465 | None:intergenic |
| ATGTAGAAAGCAGAACAGCT+TGG | 0.572213 | 4_1:-60452587 | None:intergenic |
| TGTCCTACTATAGGTGTTGG+TGG | 0.598722 | 4_1:-60452483 | None:intergenic |
| GAATGTCCTACTATAGGTGT+TGG | 0.600015 | 4_1:-60452486 | None:intergenic |
| GTGGCCATGACTTTGAGGGT+CGG | 0.601490 | 4_1:-60452674 | None:intergenic |
| CAGATTCGAATCCGAAGCGG+TGG | 0.621977 | 4_1:-60452693 | None:intergenic |
| ATCTACACCTCCAAGAAACA+AGG | 0.636642 | 4_1:+60452071 | Msa0561030:CDS |
| AGGACCGACCCTCAAAGTCA+TGG | 0.642967 | 4_1:+60452670 | Msa0561030:CDS |
| GGTGTTGGTGGACACATCAG+TGG | 0.646578 | 4_1:-60452471 | None:intergenic |
| GTTGGTGGACACATCAGTGG+CGG | 0.651631 | 4_1:-60452468 | None:intergenic |
| AAGACCGAATTTACGAACCA+AGG | 0.678437 | 4_1:+60452434 | Msa0561030:CDS |
| ATAGTAGGACATTCACCACC+CGG | 0.688594 | 4_1:+60452495 | Msa0561030:CDS |
| CTGCAGATTCGAATCCGAAG+CGG | 0.713192 | 4_1:-60452696 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGAAAACTTTATAGTTATA+TGG | - | chr4_1:60451638-60451657 | None:intergenic | 15.0% |
| !! | TAGAAAACTTTATAGTTATA+TGG | - | chr4_1:60451638-60451657 | None:intergenic | 15.0% |
| !! | AGATGTCAATAATAATTGAT+GGG | - | chr4_1:60451105-60451124 | None:intergenic | 20.0% |
| !! | TAGATGTCAATAATAATTGA+TGG | - | chr4_1:60451106-60451125 | None:intergenic | 20.0% |
| !!! | TTGTTACATCTTTTGTTTTA+CGG | + | chr4_1:60451176-60451195 | Msa0561030:intron | 20.0% |
| !! | ATTATAGAGATCTTGATATT+GGG | - | chr4_1:60451576-60451595 | None:intergenic | 20.0% |
| !! | AATTATAGAGATCTTGATAT+TGG | - | chr4_1:60451577-60451596 | None:intergenic | 20.0% |
| !! | TGGAAAAAATGAAAATGAAT+TGG | - | chr4_1:60451663-60451682 | None:intergenic | 20.0% |
| !! | AAATTTATTACTCAGTTCAT+TGG | - | chr4_1:60451705-60451724 | None:intergenic | 20.0% |
| !! | AATGAACTGAGTAATAAATT+TGG | + | chr4_1:60451704-60451723 | Msa0561030:intron | 20.0% |
| !! | TATAAATTTCCATATCTATG+TGG | + | chr4_1:60451727-60451746 | Msa0561030:intron | 20.0% |
| !! | AATTACTGTTATCTTACAAA+GGG | - | chr4_1:60452151-60452170 | None:intergenic | 20.0% |
| !! | AAATTACTGTTATCTTACAA+AGG | - | chr4_1:60452152-60452171 | None:intergenic | 20.0% |
| !! | AGATGTCAATAATAATTGAT+GGG | - | chr4_1:60451105-60451124 | None:intergenic | 20.0% |
| !! | TAGATGTCAATAATAATTGA+TGG | - | chr4_1:60451106-60451125 | None:intergenic | 20.0% |
| !!! | TTGTTACATCTTTTGTTTTA+CGG | + | chr4_1:60451176-60451195 | Msa0561030:intron | 20.0% |
| !! | ATTATAGAGATCTTGATATT+GGG | - | chr4_1:60451576-60451595 | None:intergenic | 20.0% |
| !! | AATTATAGAGATCTTGATAT+TGG | - | chr4_1:60451577-60451596 | None:intergenic | 20.0% |
| !! | TGGAAAAAATGAAAATGAAT+TGG | - | chr4_1:60451663-60451682 | None:intergenic | 20.0% |
| !! | AAATTTATTACTCAGTTCAT+TGG | - | chr4_1:60451705-60451724 | None:intergenic | 20.0% |
| !! | AATGAACTGAGTAATAAATT+TGG | + | chr4_1:60451704-60451723 | Msa0561030:intron | 20.0% |
| !! | TATAAATTTCCATATCTATG+TGG | + | chr4_1:60451727-60451746 | Msa0561030:intron | 20.0% |
| !! | AATTACTGTTATCTTACAAA+GGG | - | chr4_1:60452151-60452170 | None:intergenic | 20.0% |
| !! | AAATTACTGTTATCTTACAA+AGG | - | chr4_1:60452152-60452171 | None:intergenic | 20.0% |
| ! | TTTATCCCATAGAGTATATT+TGG | - | chr4_1:60450716-60450735 | None:intergenic | 25.0% |
| !!! | ATGAAAGCATTCAAAATAGT+CGG | + | chr4_1:60450814-60450833 | Msa0561030:intron | 25.0% |
| !! | AAGTAAATCTATGTGTTGAT+AGG | - | chr4_1:60450894-60450913 | None:intergenic | 25.0% |
| ! | AACAAAGAAAAAATTGCCAT+GGG | - | chr4_1:60451161-60451180 | None:intergenic | 25.0% |
| ! | TAACAAAGAAAAAATTGCCA+TGG | - | chr4_1:60451162-60451181 | None:intergenic | 25.0% |
| ! | TGGAATTAAAAGAAAACGTT+TGG | - | chr4_1:60451261-60451280 | None:intergenic | 25.0% |
| ! | TTATAAGCAAGCTAGTATTT+GGG | - | chr4_1:60451527-60451546 | None:intergenic | 25.0% |
| ! | TTATAGAGATCTTGATATTG+GGG | - | chr4_1:60451575-60451594 | None:intergenic | 25.0% |
| !!! | ATGGTGATATTTTTTCCTTA+TGG | - | chr4_1:60451793-60451812 | None:intergenic | 25.0% |
| ! | ATAAGGAAAAAATATCACCA+TGG | + | chr4_1:60451792-60451811 | Msa0561030:intron | 25.0% |
| ! | AGGGTAAATTCAAGTATAAA+GGG | - | chr4_1:60452132-60452151 | None:intergenic | 25.0% |
| ! | AAGGGTAAATTCAAGTATAA+AGG | - | chr4_1:60452133-60452152 | None:intergenic | 25.0% |
| !!! | AATGGGTGAAGATTATTTTT+GGG | - | chr4_1:60452349-60452368 | None:intergenic | 25.0% |
| !!! | AACCAAGATTTTGGTTTTTT+CGG | + | chr4_1:60452520-60452539 | Msa0561030:CDS | 25.0% |
| ! | TTTATCCCATAGAGTATATT+TGG | - | chr4_1:60450716-60450735 | None:intergenic | 25.0% |
| !!! | ATGAAAGCATTCAAAATAGT+CGG | + | chr4_1:60450814-60450833 | Msa0561030:intron | 25.0% |
| !! | AAGTAAATCTATGTGTTGAT+AGG | - | chr4_1:60450894-60450913 | None:intergenic | 25.0% |
| ! | AACAAAGAAAAAATTGCCAT+GGG | - | chr4_1:60451161-60451180 | None:intergenic | 25.0% |
| ! | TAACAAAGAAAAAATTGCCA+TGG | - | chr4_1:60451162-60451181 | None:intergenic | 25.0% |
| ! | TGGAATTAAAAGAAAACGTT+TGG | - | chr4_1:60451261-60451280 | None:intergenic | 25.0% |
| ! | TTATAAGCAAGCTAGTATTT+GGG | - | chr4_1:60451527-60451546 | None:intergenic | 25.0% |
| ! | TTATAGAGATCTTGATATTG+GGG | - | chr4_1:60451575-60451594 | None:intergenic | 25.0% |
| !!! | ATGGTGATATTTTTTCCTTA+TGG | - | chr4_1:60451793-60451812 | None:intergenic | 25.0% |
| ! | ATAAGGAAAAAATATCACCA+TGG | + | chr4_1:60451792-60451811 | Msa0561030:intron | 25.0% |
| ! | AGGGTAAATTCAAGTATAAA+GGG | - | chr4_1:60452132-60452151 | None:intergenic | 25.0% |
| ! | AAGGGTAAATTCAAGTATAA+AGG | - | chr4_1:60452133-60452152 | None:intergenic | 25.0% |
| !!! | AATGGGTGAAGATTATTTTT+GGG | - | chr4_1:60452349-60452368 | None:intergenic | 25.0% |
| !!! | AACCAAGATTTTGGTTTTTT+CGG | + | chr4_1:60452520-60452539 | Msa0561030:CDS | 25.0% |
| CTGTTATAACTTAGTGATGA+AGG | + | chr4_1:60450625-60450644 | Msa0561030:intron | 30.0% | |
| ACCATCCAAATATACTCTAT+GGG | + | chr4_1:60450708-60450727 | Msa0561030:intron | 30.0% | |
| AGTGATGATCAAACATCAAT+AGG | + | chr4_1:60450751-60450770 | Msa0561030:intron | 30.0% | |
| GGCTAACAAAATCTATATTC+AGG | + | chr4_1:60450772-60450791 | Msa0561030:intron | 30.0% | |
| TGCAAATGGACATTTATCAT+CGG | - | chr4_1:60450855-60450874 | None:intergenic | 30.0% | |
| ! | ATGCTTACAATTGGTAACTA+TGG | - | chr4_1:60451022-60451041 | None:intergenic | 30.0% |
| GATTGAAACATGCTTACAAT+TGG | - | chr4_1:60451031-60451050 | None:intergenic | 30.0% | |
| AAAAATGTTGACATTGTCTG+TGG | - | chr4_1:60451053-60451072 | None:intergenic | 30.0% | |
| ! | TCATTTCTGAAGAAGTTAAG+AGG | + | chr4_1:60451442-60451461 | Msa0561030:intron | 30.0% |
| CAAGAACAACTTCAAAAGAT+TGG | - | chr4_1:60451491-60451510 | None:intergenic | 30.0% | |
| TATAAGCAAGCTAGTATTTG+GGG | - | chr4_1:60451526-60451545 | None:intergenic | 30.0% | |
| GTTATAAGCAAGCTAGTATT+TGG | - | chr4_1:60451528-60451547 | None:intergenic | 30.0% | |
| ATTGGGGTGAATAATAACAA+TGG | - | chr4_1:60451559-60451578 | None:intergenic | 30.0% | |
| TAATTGATATATGCAGCTCT+TGG | + | chr4_1:60451592-60451611 | Msa0561030:intron | 30.0% | |
| TTTCCATATCTATGTGGAAA+TGG | + | chr4_1:60451733-60451752 | Msa0561030:intron | 30.0% | |
| ATTCCATTTCCACATAGATA+TGG | - | chr4_1:60451739-60451758 | None:intergenic | 30.0% | |
| !!! | GTGATATTTTTTCCTTATGG+TGG | - | chr4_1:60451790-60451809 | None:intergenic | 30.0% |
| !! | AAAGTGGATTAGAAGGAATA+TGG | - | chr4_1:60451849-60451868 | None:intergenic | 30.0% |
| ! | AATCGGTTCTTTACCTTTAT+GGG | - | chr4_1:60451972-60451991 | None:intergenic | 30.0% |
| !! | ATATTTCAAGCCTTGTTTCT+TGG | - | chr4_1:60452084-60452103 | None:intergenic | 30.0% |
| GGGTAAATTCAAGTATAAAG+GGG | - | chr4_1:60452131-60452150 | None:intergenic | 30.0% | |
| ! | GCATTTTGTTCCAATGTTTT+TGG | + | chr4_1:60452228-60452247 | Msa0561030:intron | 30.0% |
| CTTTAACGTTCCAAAAACAT+TGG | - | chr4_1:60452241-60452260 | None:intergenic | 30.0% | |
| TTAAAGACTGTCACAATTGA+TGG | + | chr4_1:60452255-60452274 | Msa0561030:intron | 30.0% | |
| !!! | GTTTTGGAGTCATAATTTCA+TGG | - | chr4_1:60452302-60452321 | None:intergenic | 30.0% |
| !!! | GATTATTTTTGGGCTATTAG+AGG | - | chr4_1:60452339-60452358 | None:intergenic | 30.0% |
| ! | CAATGGGTGAAGATTATTTT+TGG | - | chr4_1:60452350-60452369 | None:intergenic | 30.0% |
| !! | AAACCAAAATCTTGGTTTTC+CGG | - | chr4_1:60452517-60452536 | None:intergenic | 30.0% |
| TACCGAAAAAACCAAAATCT+TGG | - | chr4_1:60452525-60452544 | None:intergenic | 30.0% | |
| TGAGATCAAGGATGATAAAT+GGG | + | chr4_1:60452634-60452653 | Msa0561030:CDS | 30.0% | |
| CTGTTATAACTTAGTGATGA+AGG | + | chr4_1:60450625-60450644 | Msa0561030:intron | 30.0% | |
| ACCATCCAAATATACTCTAT+GGG | + | chr4_1:60450708-60450727 | Msa0561030:intron | 30.0% | |
| AGTGATGATCAAACATCAAT+AGG | + | chr4_1:60450751-60450770 | Msa0561030:intron | 30.0% | |
| GGCTAACAAAATCTATATTC+AGG | + | chr4_1:60450772-60450791 | Msa0561030:intron | 30.0% | |
| TGCAAATGGACATTTATCAT+CGG | - | chr4_1:60450855-60450874 | None:intergenic | 30.0% | |
| ! | ATGCTTACAATTGGTAACTA+TGG | - | chr4_1:60451022-60451041 | None:intergenic | 30.0% |
| GATTGAAACATGCTTACAAT+TGG | - | chr4_1:60451031-60451050 | None:intergenic | 30.0% | |
| AAAAATGTTGACATTGTCTG+TGG | - | chr4_1:60451053-60451072 | None:intergenic | 30.0% | |
| ! | TCATTTCTGAAGAAGTTAAG+AGG | + | chr4_1:60451442-60451461 | Msa0561030:intron | 30.0% |
| CAAGAACAACTTCAAAAGAT+TGG | - | chr4_1:60451491-60451510 | None:intergenic | 30.0% | |
| TATAAGCAAGCTAGTATTTG+GGG | - | chr4_1:60451526-60451545 | None:intergenic | 30.0% | |
| GTTATAAGCAAGCTAGTATT+TGG | - | chr4_1:60451528-60451547 | None:intergenic | 30.0% | |
| ATTGGGGTGAATAATAACAA+TGG | - | chr4_1:60451559-60451578 | None:intergenic | 30.0% | |
| TAATTGATATATGCAGCTCT+TGG | + | chr4_1:60451592-60451611 | Msa0561030:intron | 30.0% | |
| TTTCCATATCTATGTGGAAA+TGG | + | chr4_1:60451733-60451752 | Msa0561030:intron | 30.0% | |
| ATTCCATTTCCACATAGATA+TGG | - | chr4_1:60451739-60451758 | None:intergenic | 30.0% | |
| !!! | GTGATATTTTTTCCTTATGG+TGG | - | chr4_1:60451790-60451809 | None:intergenic | 30.0% |
| !! | AAAGTGGATTAGAAGGAATA+TGG | - | chr4_1:60451849-60451868 | None:intergenic | 30.0% |
| ! | AATCGGTTCTTTACCTTTAT+GGG | - | chr4_1:60451972-60451991 | None:intergenic | 30.0% |
| !! | ATATTTCAAGCCTTGTTTCT+TGG | - | chr4_1:60452084-60452103 | None:intergenic | 30.0% |
| GGGTAAATTCAAGTATAAAG+GGG | - | chr4_1:60452131-60452150 | None:intergenic | 30.0% | |
| ! | GCATTTTGTTCCAATGTTTT+TGG | + | chr4_1:60452228-60452247 | Msa0561030:intron | 30.0% |
| CTTTAACGTTCCAAAAACAT+TGG | - | chr4_1:60452241-60452260 | None:intergenic | 30.0% | |
| TTAAAGACTGTCACAATTGA+TGG | + | chr4_1:60452255-60452274 | Msa0561030:intron | 30.0% | |
| !!! | GTTTTGGAGTCATAATTTCA+TGG | - | chr4_1:60452302-60452321 | None:intergenic | 30.0% |
| !!! | GATTATTTTTGGGCTATTAG+AGG | - | chr4_1:60452339-60452358 | None:intergenic | 30.0% |
| ! | CAATGGGTGAAGATTATTTT+TGG | - | chr4_1:60452350-60452369 | None:intergenic | 30.0% |
| !! | AAACCAAAATCTTGGTTTTC+CGG | - | chr4_1:60452517-60452536 | None:intergenic | 30.0% |
| TACCGAAAAAACCAAAATCT+TGG | - | chr4_1:60452525-60452544 | None:intergenic | 30.0% | |
| TGAGATCAAGGATGATAAAT+GGG | + | chr4_1:60452634-60452653 | Msa0561030:CDS | 30.0% | |
| TATACCTTCACATTTGTCCA+AGG | + | chr4_1:60450296-60450315 | Msa0561030:intron | 35.0% | |
| ATACCTTCACATTTGTCCAA+GGG | + | chr4_1:60450297-60450316 | Msa0561030:intron | 35.0% | |
| CACCATCCAAATATACTCTA+TGG | + | chr4_1:60450707-60450726 | Msa0561030:intron | 35.0% | |
| TCCCATAGAGTATATTTGGA+TGG | - | chr4_1:60450712-60450731 | None:intergenic | 35.0% | |
| TACTCTATGGGATAAAACCA+AGG | + | chr4_1:60450720-60450739 | Msa0561030:intron | 35.0% | |
| ! | AAAGCATTCAAAATAGTCGG+AGG | + | chr4_1:60450817-60450836 | Msa0561030:intron | 35.0% |
| AATGGACATTTATCATCGGT+GGG | - | chr4_1:60450851-60450870 | None:intergenic | 35.0% | |
| AAATGGACATTTATCATCGG+TGG | - | chr4_1:60450852-60450871 | None:intergenic | 35.0% | |
| GATGATAAATGTCCATTTGC+AGG | + | chr4_1:60450854-60450873 | Msa0561030:intron | 35.0% | |
| CTTGGAACTTAAGAAACTGT+TGG | - | chr4_1:60450975-60450994 | None:intergenic | 35.0% | |
| CAACAGTTTCTTAAGTTCCA+AGG | + | chr4_1:60450973-60450992 | Msa0561030:intron | 35.0% | |
| AACTATAGAGCGAGATTTGT+AGG | + | chr4_1:60450996-60451015 | Msa0561030:intron | 35.0% | |
| GAAAACGTTTGGTACGTATT+AGG | - | chr4_1:60451250-60451269 | None:intergenic | 35.0% | |
| GTACAAAAATGCTACACAAC+TGG | - | chr4_1:60451281-60451300 | None:intergenic | 35.0% | |
| !! | CTTGGTGACTTTGAAACAAA+AGG | + | chr4_1:60451610-60451629 | Msa0561030:intron | 35.0% |
| ! | TTTTCCTTATGGTGGCATAA+TGG | - | chr4_1:60451782-60451801 | None:intergenic | 35.0% |
| AAATATCACCATGGCATCTT+TGG | + | chr4_1:60451801-60451820 | Msa0561030:intron | 35.0% | |
| ATTCCTTCTAATCCACTTTC+AGG | + | chr4_1:60451850-60451869 | Msa0561030:intron | 35.0% | |
| !! | ATTCCTGAAAGTGGATTAGA+AGG | - | chr4_1:60451856-60451875 | None:intergenic | 35.0% |
| TTCTAATCCACTTTCAGGAA+TGG | + | chr4_1:60451855-60451874 | Msa0561030:intron | 35.0% | |
| TCTAATCCACTTTCAGGAAT+GGG | + | chr4_1:60451856-60451875 | Msa0561030:intron | 35.0% | |
| AAAATTCCCATTCCTGAAAG+TGG | - | chr4_1:60451865-60451884 | None:intergenic | 35.0% | |
| ! | GAATCGGTTCTTTACCTTTA+TGG | - | chr4_1:60451973-60451992 | None:intergenic | 35.0% |
| AGATTGTGTTGAGATGAGTT+GGG | - | chr4_1:60451998-60452017 | None:intergenic | 35.0% | |
| AAGATTGTGTTGAGATGAGT+TGG | - | chr4_1:60451999-60452018 | None:intergenic | 35.0% | |
| CAACAAAGCTTATTCACAAG+TGG | - | chr4_1:60452209-60452228 | None:intergenic | 35.0% | |
| !!! | TATTTTTGGGCTATTAGAGG+TGG | - | chr4_1:60452336-60452355 | None:intergenic | 35.0% |
| TTTCTTGACAGAGAAGCAAT+GGG | - | chr4_1:60452366-60452385 | None:intergenic | 35.0% | |
| ACATAATTGATGTGAAGGGT+AGG | - | chr4_1:60452389-60452408 | None:intergenic | 35.0% | |
| GCTCACATAATTGATGTGAA+GGG | - | chr4_1:60452393-60452412 | None:intergenic | 35.0% | |
| TGCTCACATAATTGATGTGA+AGG | - | chr4_1:60452394-60452413 | None:intergenic | 35.0% | |
| !! | AACCAAAATCTTGGTTTTCC+GGG | - | chr4_1:60452516-60452535 | None:intergenic | 35.0% |
| GTGAGATCAAGGATGATAAA+TGG | + | chr4_1:60452633-60452652 | Msa0561030:CDS | 35.0% | |
| AAATGGGACTTCAGAAACAT+AGG | + | chr4_1:60452650-60452669 | Msa0561030:CDS | 35.0% | |
| TATACCTTCACATTTGTCCA+AGG | + | chr4_1:60450296-60450315 | Msa0561030:intron | 35.0% | |
| ATACCTTCACATTTGTCCAA+GGG | + | chr4_1:60450297-60450316 | Msa0561030:intron | 35.0% | |
| CACCATCCAAATATACTCTA+TGG | + | chr4_1:60450707-60450726 | Msa0561030:intron | 35.0% | |
| TCCCATAGAGTATATTTGGA+TGG | - | chr4_1:60450712-60450731 | None:intergenic | 35.0% | |
| TACTCTATGGGATAAAACCA+AGG | + | chr4_1:60450720-60450739 | Msa0561030:intron | 35.0% | |
| ! | AAAGCATTCAAAATAGTCGG+AGG | + | chr4_1:60450817-60450836 | Msa0561030:intron | 35.0% |
| AATGGACATTTATCATCGGT+GGG | - | chr4_1:60450851-60450870 | None:intergenic | 35.0% | |
| AAATGGACATTTATCATCGG+TGG | - | chr4_1:60450852-60450871 | None:intergenic | 35.0% | |
| GATGATAAATGTCCATTTGC+AGG | + | chr4_1:60450854-60450873 | Msa0561030:intron | 35.0% | |
| CTTGGAACTTAAGAAACTGT+TGG | - | chr4_1:60450975-60450994 | None:intergenic | 35.0% | |
| CAACAGTTTCTTAAGTTCCA+AGG | + | chr4_1:60450973-60450992 | Msa0561030:intron | 35.0% | |
| AACTATAGAGCGAGATTTGT+AGG | + | chr4_1:60450996-60451015 | Msa0561030:intron | 35.0% | |
| GAAAACGTTTGGTACGTATT+AGG | - | chr4_1:60451250-60451269 | None:intergenic | 35.0% | |
| GTACAAAAATGCTACACAAC+TGG | - | chr4_1:60451281-60451300 | None:intergenic | 35.0% | |
| !! | CTTGGTGACTTTGAAACAAA+AGG | + | chr4_1:60451610-60451629 | Msa0561030:intron | 35.0% |
| ! | TTTTCCTTATGGTGGCATAA+TGG | - | chr4_1:60451782-60451801 | None:intergenic | 35.0% |
| AAATATCACCATGGCATCTT+TGG | + | chr4_1:60451801-60451820 | Msa0561030:intron | 35.0% | |
| ATTCCTTCTAATCCACTTTC+AGG | + | chr4_1:60451850-60451869 | Msa0561030:intron | 35.0% | |
| !! | ATTCCTGAAAGTGGATTAGA+AGG | - | chr4_1:60451856-60451875 | None:intergenic | 35.0% |
| TTCTAATCCACTTTCAGGAA+TGG | + | chr4_1:60451855-60451874 | Msa0561030:intron | 35.0% | |
| TCTAATCCACTTTCAGGAAT+GGG | + | chr4_1:60451856-60451875 | Msa0561030:intron | 35.0% | |
| AAAATTCCCATTCCTGAAAG+TGG | - | chr4_1:60451865-60451884 | None:intergenic | 35.0% | |
| ! | GAATCGGTTCTTTACCTTTA+TGG | - | chr4_1:60451973-60451992 | None:intergenic | 35.0% |
| AGATTGTGTTGAGATGAGTT+GGG | - | chr4_1:60451998-60452017 | None:intergenic | 35.0% | |
| AAGATTGTGTTGAGATGAGT+TGG | - | chr4_1:60451999-60452018 | None:intergenic | 35.0% | |
| CAACAAAGCTTATTCACAAG+TGG | - | chr4_1:60452209-60452228 | None:intergenic | 35.0% | |
| !!! | TATTTTTGGGCTATTAGAGG+TGG | - | chr4_1:60452336-60452355 | None:intergenic | 35.0% |
| TTTCTTGACAGAGAAGCAAT+GGG | - | chr4_1:60452366-60452385 | None:intergenic | 35.0% | |
| ACATAATTGATGTGAAGGGT+AGG | - | chr4_1:60452389-60452408 | None:intergenic | 35.0% | |
| GCTCACATAATTGATGTGAA+GGG | - | chr4_1:60452393-60452412 | None:intergenic | 35.0% | |
| TGCTCACATAATTGATGTGA+AGG | - | chr4_1:60452394-60452413 | None:intergenic | 35.0% | |
| !! | AACCAAAATCTTGGTTTTCC+GGG | - | chr4_1:60452516-60452535 | None:intergenic | 35.0% |
| GTGAGATCAAGGATGATAAA+TGG | + | chr4_1:60452633-60452652 | Msa0561030:CDS | 35.0% | |
| AAATGGGACTTCAGAAACAT+AGG | + | chr4_1:60452650-60452669 | Msa0561030:CDS | 35.0% | |
| GGAATTCTATTTGTGTCCCT+TGG | - | chr4_1:60450316-60450335 | None:intergenic | 40.0% | |
| TTGTAGCGCAAGTAATTGTG+TGG | + | chr4_1:60450435-60450454 | Msa0561030:intron | 40.0% | |
| AATCTCGCTCTATAGTTCCT+TGG | - | chr4_1:60450993-60451012 | None:intergenic | 40.0% | |
| AATTGCTAGCATAACACCCA+TGG | + | chr4_1:60451086-60451105 | Msa0561030:intron | 40.0% | |
| ACGTTTGGTACGTATTAGGT+GGG | - | chr4_1:60451246-60451265 | None:intergenic | 40.0% | |
| AACGTTTGGTACGTATTAGG+TGG | - | chr4_1:60451247-60451266 | None:intergenic | 40.0% | |
| GACAAAGAAATCAGCAGCTA+AGG | - | chr4_1:60451391-60451410 | None:intergenic | 40.0% | |
| ACCTTCTCTCATGTGTTCAA+GGG | - | chr4_1:60451413-60451432 | None:intergenic | 40.0% | |
| TACCTTCTCTCATGTGTTCA+AGG | - | chr4_1:60451414-60451433 | None:intergenic | 40.0% | |
| TTGGCATCAAGAAAGTGATG+AGG | - | chr4_1:60451686-60451705 | None:intergenic | 40.0% | |
| CTATCCATTATGCCACCATA+AGG | + | chr4_1:60451775-60451794 | Msa0561030:intron | 40.0% | |
| GCACCATCATCATGAAACAT+AGG | + | chr4_1:60451823-60451842 | Msa0561030:intron | 40.0% | |
| TGGCCTATGTTTCATGATGA+TGG | - | chr4_1:60451829-60451848 | None:intergenic | 40.0% | |
| ! | GTTTCAAGTGGTTCGTCTTT+CGG | + | chr4_1:60451943-60451962 | Msa0561030:CDS | 40.0% |
| !! | TGAGATGAGTTGGGTTGAAT+CGG | - | chr4_1:60451989-60452008 | None:intergenic | 40.0% |
| ATCTACACCTCCAAGAAACA+AGG | + | chr4_1:60452071-60452090 | Msa0561030:CDS | 40.0% | |
| !! | TTTCAAGCCTTGTTTCTTGG+AGG | - | chr4_1:60452081-60452100 | None:intergenic | 40.0% |
| GTTTCTTGACAGAGAAGCAA+TGG | - | chr4_1:60452367-60452386 | None:intergenic | 40.0% | |
| AAGACCGAATTTACGAACCA+AGG | + | chr4_1:60452434-60452453 | Msa0561030:CDS | 40.0% | |
| ! | GGAACCTTGGTTCGTAAATT+CGG | - | chr4_1:60452441-60452460 | None:intergenic | 40.0% |
| GAATGTCCTACTATAGGTGT+TGG | - | chr4_1:60452489-60452508 | None:intergenic | 40.0% | |
| GTTCAATCTGGTGCAACAAT+TGG | - | chr4_1:60452567-60452586 | None:intergenic | 40.0% | |
| TGTAGAAAGCAGAACAGCTT+GGG | - | chr4_1:60452589-60452608 | None:intergenic | 40.0% | |
| ATGTAGAAAGCAGAACAGCT+TGG | - | chr4_1:60452590-60452609 | None:intergenic | 40.0% | |
| !! | CTCTGAAGTTTGTGAGATCA+AGG | + | chr4_1:60452622-60452641 | Msa0561030:CDS | 40.0% |
| GGAATTCTATTTGTGTCCCT+TGG | - | chr4_1:60450316-60450335 | None:intergenic | 40.0% | |
| TTGTAGCGCAAGTAATTGTG+TGG | + | chr4_1:60450435-60450454 | Msa0561030:intron | 40.0% | |
| AATCTCGCTCTATAGTTCCT+TGG | - | chr4_1:60450993-60451012 | None:intergenic | 40.0% | |
| AATTGCTAGCATAACACCCA+TGG | + | chr4_1:60451086-60451105 | Msa0561030:intron | 40.0% | |
| ACGTTTGGTACGTATTAGGT+GGG | - | chr4_1:60451246-60451265 | None:intergenic | 40.0% | |
| AACGTTTGGTACGTATTAGG+TGG | - | chr4_1:60451247-60451266 | None:intergenic | 40.0% | |
| GACAAAGAAATCAGCAGCTA+AGG | - | chr4_1:60451391-60451410 | None:intergenic | 40.0% | |
| ACCTTCTCTCATGTGTTCAA+GGG | - | chr4_1:60451413-60451432 | None:intergenic | 40.0% | |
| TACCTTCTCTCATGTGTTCA+AGG | - | chr4_1:60451414-60451433 | None:intergenic | 40.0% | |
| TTGGCATCAAGAAAGTGATG+AGG | - | chr4_1:60451686-60451705 | None:intergenic | 40.0% | |
| CTATCCATTATGCCACCATA+AGG | + | chr4_1:60451775-60451794 | Msa0561030:intron | 40.0% | |
| GCACCATCATCATGAAACAT+AGG | + | chr4_1:60451823-60451842 | Msa0561030:intron | 40.0% | |
| TGGCCTATGTTTCATGATGA+TGG | - | chr4_1:60451829-60451848 | None:intergenic | 40.0% | |
| ! | GTTTCAAGTGGTTCGTCTTT+CGG | + | chr4_1:60451943-60451962 | Msa0561030:CDS | 40.0% |
| !! | TGAGATGAGTTGGGTTGAAT+CGG | - | chr4_1:60451989-60452008 | None:intergenic | 40.0% |
| ATCTACACCTCCAAGAAACA+AGG | + | chr4_1:60452071-60452090 | Msa0561030:CDS | 40.0% | |
| !! | TTTCAAGCCTTGTTTCTTGG+AGG | - | chr4_1:60452081-60452100 | None:intergenic | 40.0% |
| GTTTCTTGACAGAGAAGCAA+TGG | - | chr4_1:60452367-60452386 | None:intergenic | 40.0% | |
| AAGACCGAATTTACGAACCA+AGG | + | chr4_1:60452434-60452453 | Msa0561030:CDS | 40.0% | |
| ! | GGAACCTTGGTTCGTAAATT+CGG | - | chr4_1:60452441-60452460 | None:intergenic | 40.0% |
| GAATGTCCTACTATAGGTGT+TGG | - | chr4_1:60452489-60452508 | None:intergenic | 40.0% | |
| GTTCAATCTGGTGCAACAAT+TGG | - | chr4_1:60452567-60452586 | None:intergenic | 40.0% | |
| TGTAGAAAGCAGAACAGCTT+GGG | - | chr4_1:60452589-60452608 | None:intergenic | 40.0% | |
| ATGTAGAAAGCAGAACAGCT+TGG | - | chr4_1:60452590-60452609 | None:intergenic | 40.0% | |
| !! | CTCTGAAGTTTGTGAGATCA+AGG | + | chr4_1:60452622-60452641 | Msa0561030:CDS | 40.0% |
| TGTCCCTTGGACAAATGTGA+AGG | - | chr4_1:60450303-60450322 | None:intergenic | 45.0% | |
| TTGTGAACTTAGCTGCTTCG+AGG | - | chr4_1:60450337-60450356 | None:intergenic | 45.0% | |
| ATCATCACTGCACTTCACCT+TGG | - | chr4_1:60450740-60450759 | None:intergenic | 45.0% | |
| ! | GTTGATAGGCTTGCCAATCT+TGG | - | chr4_1:60450880-60450899 | None:intergenic | 45.0% |
| TCCCTTGAACACATGAGAGA+AGG | + | chr4_1:60451409-60451428 | Msa0561030:intron | 45.0% | |
| GCATCAAGAAAGTGATGAGG+TGG | - | chr4_1:60451683-60451702 | None:intergenic | 45.0% | |
| CAACAGAACACTAGCTGCAA+AGG | - | chr4_1:60451917-60451936 | None:intergenic | 45.0% | |
| CTGTTGAGCAACGTTTCAAG+TGG | + | chr4_1:60451931-60451950 | Msa0561030:CDS | 45.0% | |
| CGTCTTTCGGAAACCCATAA+AGG | + | chr4_1:60451956-60451975 | Msa0561030:CDS | 45.0% | |
| TCTCTAACCAAACCAAGCTC+AGG | + | chr4_1:60452018-60452037 | Msa0561030:CDS | 45.0% | |
| GAAGTTTCCTGAGCTTGGTT+TGG | - | chr4_1:60452028-60452047 | None:intergenic | 45.0% | |
| CAAGAGAAGTTTCCTGAGCT+TGG | - | chr4_1:60452033-60452052 | None:intergenic | 45.0% | |
| ! | TTTTGGGCTATTAGAGGTGG+TGG | - | chr4_1:60452333-60452352 | None:intergenic | 45.0% |
| TGTCCACCAACACCTATAGT+AGG | + | chr4_1:60452480-60452499 | Msa0561030:CDS | 45.0% | |
| !! | TGTCCTACTATAGGTGTTGG+TGG | - | chr4_1:60452486-60452505 | None:intergenic | 45.0% |
| GGTGGTGAATGTCCTACTAT+AGG | - | chr4_1:60452495-60452514 | None:intergenic | 45.0% | |
| ATAGTAGGACATTCACCACC+CGG | + | chr4_1:60452495-60452514 | Msa0561030:CDS | 45.0% | |
| !! | CAAAATCTTGGTTTTCCGGG+TGG | - | chr4_1:60452513-60452532 | None:intergenic | 45.0% |
| ! | CACCCGGAAAACCAAGATTT+TGG | + | chr4_1:60452511-60452530 | Msa0561030:CDS | 45.0% |
| AGAACAGCTTGGGTTCAATC+TGG | - | chr4_1:60452579-60452598 | None:intergenic | 45.0% | |
| GGATTCGAATCTGCAGGTTA+TGG | + | chr4_1:60452703-60452722 | Msa0561030:CDS | 45.0% | |
| TGTCCCTTGGACAAATGTGA+AGG | - | chr4_1:60450303-60450322 | None:intergenic | 45.0% | |
| TTGTGAACTTAGCTGCTTCG+AGG | - | chr4_1:60450337-60450356 | None:intergenic | 45.0% | |
| ATCATCACTGCACTTCACCT+TGG | - | chr4_1:60450740-60450759 | None:intergenic | 45.0% | |
| ! | GTTGATAGGCTTGCCAATCT+TGG | - | chr4_1:60450880-60450899 | None:intergenic | 45.0% |
| TCCCTTGAACACATGAGAGA+AGG | + | chr4_1:60451409-60451428 | Msa0561030:intron | 45.0% | |
| GCATCAAGAAAGTGATGAGG+TGG | - | chr4_1:60451683-60451702 | None:intergenic | 45.0% | |
| CAACAGAACACTAGCTGCAA+AGG | - | chr4_1:60451917-60451936 | None:intergenic | 45.0% | |
| CTGTTGAGCAACGTTTCAAG+TGG | + | chr4_1:60451931-60451950 | Msa0561030:CDS | 45.0% | |
| CGTCTTTCGGAAACCCATAA+AGG | + | chr4_1:60451956-60451975 | Msa0561030:CDS | 45.0% | |
| TCTCTAACCAAACCAAGCTC+AGG | + | chr4_1:60452018-60452037 | Msa0561030:CDS | 45.0% | |
| GAAGTTTCCTGAGCTTGGTT+TGG | - | chr4_1:60452028-60452047 | None:intergenic | 45.0% | |
| CAAGAGAAGTTTCCTGAGCT+TGG | - | chr4_1:60452033-60452052 | None:intergenic | 45.0% | |
| ! | TTTTGGGCTATTAGAGGTGG+TGG | - | chr4_1:60452333-60452352 | None:intergenic | 45.0% |
| TGTCCACCAACACCTATAGT+AGG | + | chr4_1:60452480-60452499 | Msa0561030:CDS | 45.0% | |
| !! | TGTCCTACTATAGGTGTTGG+TGG | - | chr4_1:60452486-60452505 | None:intergenic | 45.0% |
| GGTGGTGAATGTCCTACTAT+AGG | - | chr4_1:60452495-60452514 | None:intergenic | 45.0% | |
| ATAGTAGGACATTCACCACC+CGG | + | chr4_1:60452495-60452514 | Msa0561030:CDS | 45.0% | |
| !! | CAAAATCTTGGTTTTCCGGG+TGG | - | chr4_1:60452513-60452532 | None:intergenic | 45.0% |
| ! | CACCCGGAAAACCAAGATTT+TGG | + | chr4_1:60452511-60452530 | Msa0561030:CDS | 45.0% |
| AGAACAGCTTGGGTTCAATC+TGG | - | chr4_1:60452579-60452598 | None:intergenic | 45.0% | |
| GGATTCGAATCTGCAGGTTA+TGG | + | chr4_1:60452703-60452722 | Msa0561030:CDS | 45.0% | |
| !!! | TTTTTTAATAAATAAAAGTT+TGG | - | chr4_1:60451317-60451336 | None:intergenic | 5.0% |
| !!! | TTTTTTAATAAATAAAAGTT+TGG | - | chr4_1:60451317-60451336 | None:intergenic | 5.0% |
| GTCCATTTGCAGGCCAAGAT+TGG | + | chr4_1:60450864-60450883 | Msa0561030:intron | 50.0% | |
| TGCCAATCTTGGCCTGCAAA+TGG | - | chr4_1:60450869-60450888 | None:intergenic | 50.0% | |
| TACGTATTAGGTGGGTGAGC+GGG | - | chr4_1:60451238-60451257 | None:intergenic | 50.0% | |
| GTACGTATTAGGTGGGTGAG+CGG | - | chr4_1:60451239-60451258 | None:intergenic | 50.0% | |
| ! | TGATGGTGCCAAAGATGCCA+TGG | - | chr4_1:60451812-60451831 | None:intergenic | 50.0% |
| CTGCAGATTCGAATCCGAAG+CGG | - | chr4_1:60452699-60452718 | None:intergenic | 50.0% | |
| GTCCATTTGCAGGCCAAGAT+TGG | + | chr4_1:60450864-60450883 | Msa0561030:intron | 50.0% | |
| TGCCAATCTTGGCCTGCAAA+TGG | - | chr4_1:60450869-60450888 | None:intergenic | 50.0% | |
| TACGTATTAGGTGGGTGAGC+GGG | - | chr4_1:60451238-60451257 | None:intergenic | 50.0% | |
| GTACGTATTAGGTGGGTGAG+CGG | - | chr4_1:60451239-60451258 | None:intergenic | 50.0% | |
| ! | TGATGGTGCCAAAGATGCCA+TGG | - | chr4_1:60451812-60451831 | None:intergenic | 50.0% |
| CTGCAGATTCGAATCCGAAG+CGG | - | chr4_1:60452699-60452718 | None:intergenic | 50.0% | |
| ATTAGGTGGGTGAGCGGGTA+TGG | - | chr4_1:60451233-60451252 | None:intergenic | 55.0% | |
| !!! | GGTGGTGGAGGAGCAAGTTT+TGG | - | chr4_1:60452318-60452337 | None:intergenic | 55.0% |
| ! | TGGGCTATTAGAGGTGGTGG+AGG | - | chr4_1:60452330-60452349 | None:intergenic | 55.0% |
| ! | GTTGGTGGACACATCAGTGG+CGG | - | chr4_1:60452471-60452490 | None:intergenic | 55.0% |
| !! | GGTGTTGGTGGACACATCAG+TGG | - | chr4_1:60452474-60452493 | None:intergenic | 55.0% |
| AGGACCGACCCTCAAAGTCA+TGG | + | chr4_1:60452670-60452689 | Msa0561030:CDS | 55.0% | |
| ! | GTGGCCATGACTTTGAGGGT+CGG | - | chr4_1:60452677-60452696 | None:intergenic | 55.0% |
| AGCGGTGGCCATGACTTTGA+GGG | - | chr4_1:60452681-60452700 | None:intergenic | 55.0% | |
| AAGCGGTGGCCATGACTTTG+AGG | - | chr4_1:60452682-60452701 | None:intergenic | 55.0% | |
| CAAAGTCATGGCCACCGCTT+CGG | + | chr4_1:60452682-60452701 | Msa0561030:CDS | 55.0% | |
| CAGATTCGAATCCGAAGCGG+TGG | - | chr4_1:60452696-60452715 | None:intergenic | 55.0% | |
| CGCTTCGGATTCGAATCTGC+AGG | + | chr4_1:60452697-60452716 | Msa0561030:CDS | 55.0% | |
| ATTAGGTGGGTGAGCGGGTA+TGG | - | chr4_1:60451233-60451252 | None:intergenic | 55.0% | |
| !!! | GGTGGTGGAGGAGCAAGTTT+TGG | - | chr4_1:60452318-60452337 | None:intergenic | 55.0% |
| ! | TGGGCTATTAGAGGTGGTGG+AGG | - | chr4_1:60452330-60452349 | None:intergenic | 55.0% |
| ! | GTTGGTGGACACATCAGTGG+CGG | - | chr4_1:60452471-60452490 | None:intergenic | 55.0% |
| !! | GGTGTTGGTGGACACATCAG+TGG | - | chr4_1:60452474-60452493 | None:intergenic | 55.0% |
| AGGACCGACCCTCAAAGTCA+TGG | + | chr4_1:60452670-60452689 | Msa0561030:CDS | 55.0% | |
| ! | GTGGCCATGACTTTGAGGGT+CGG | - | chr4_1:60452677-60452696 | None:intergenic | 55.0% |
| AGCGGTGGCCATGACTTTGA+GGG | - | chr4_1:60452681-60452700 | None:intergenic | 55.0% | |
| AAGCGGTGGCCATGACTTTG+AGG | - | chr4_1:60452682-60452701 | None:intergenic | 55.0% | |
| CAAAGTCATGGCCACCGCTT+CGG | + | chr4_1:60452682-60452701 | Msa0561030:CDS | 55.0% | |
| CAGATTCGAATCCGAAGCGG+TGG | - | chr4_1:60452696-60452715 | None:intergenic | 55.0% | |
| CGCTTCGGATTCGAATCTGC+AGG | + | chr4_1:60452697-60452716 | Msa0561030:CDS | 55.0% | |
| TGGCGGCGGCTATGGAACCT+TGG | - | chr4_1:60452454-60452473 | None:intergenic | 65.0% | |
| CACATCAGTGGCGGCGGCTA+TGG | - | chr4_1:60452462-60452481 | None:intergenic | 65.0% | |
| GGTGGACACATCAGTGGCGG+CGG | - | chr4_1:60452468-60452487 | None:intergenic | 65.0% | |
| TGGCGGCGGCTATGGAACCT+TGG | - | chr4_1:60452454-60452473 | None:intergenic | 65.0% | |
| CACATCAGTGGCGGCGGCTA+TGG | - | chr4_1:60452462-60452481 | None:intergenic | 65.0% | |
| GGTGGACACATCAGTGGCGG+CGG | - | chr4_1:60452468-60452487 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 60450286 | 60452733 | 60450286 | ID=Msa0561030;Name=Msa0561030 |
| chr4_1 | mRNA | 60450286 | 60452733 | 60450286 | ID=Msa0561030-mRNA-1;Parent=Msa0561030;Name=Msa0561030-mRNA-1;_AED=0.99;_eAED=1.00;_QI=0|0|0|0.33|1|1|3|0|164 |
| chr4_1 | exon | 60450286 | 60450294 | 60450286 | ID=Msa0561030-mRNA-1:exon:18844;Parent=Msa0561030-mRNA-1 |
| chr4_1 | exon | 60451927 | 60452108 | 60451927 | ID=Msa0561030-mRNA-1:exon:18845;Parent=Msa0561030-mRNA-1 |
| chr4_1 | exon | 60452430 | 60452733 | 60452430 | ID=Msa0561030-mRNA-1:exon:18846;Parent=Msa0561030-mRNA-1 |
| chr4_1 | CDS | 60450286 | 60450294 | 60450286 | ID=Msa0561030-mRNA-1:cds;Parent=Msa0561030-mRNA-1 |
| chr4_1 | CDS | 60451927 | 60452108 | 60451927 | ID=Msa0561030-mRNA-1:cds;Parent=Msa0561030-mRNA-1 |
| chr4_1 | CDS | 60452430 | 60452733 | 60452430 | ID=Msa0561030-mRNA-1:cds;Parent=Msa0561030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
