Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0562120 | XP_039684701.1 | 96.440 | 1208 | 21 | 2 | 1 | 1208 | 1 | 1186 | 0.0 | 2409 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0562120 | sp|Q9LK40|NRPD2_ARATH | 66.804 | 1214 | 337 | 16 | 17 | 1208 | 3 | 1172 | 0.0 | 1627 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0562120 | A0A396GML5 | 96.440 | 1208 | 21 | 2 | 1 | 1208 | 1 | 1186 | 0.0 | 2409 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0432030 | Msa0562120 | 0.840750 | 7.202282e-58 | -8.615850e-47 |
Msa0562120 | Msa0616060 | 0.963510 | 3.575479e-122 | -8.615850e-47 |
Msa0562120 | Msa0655480 | 0.979125 | 2.760165e-147 | -8.615850e-47 |
Msa0562120 | Msa1368770 | 0.805644 | 1.208225e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0562120 | MtrunA17_Chr8g0375171 | 96.440 | 1208 | 21 | 2 | 1 | 1208 | 1 | 1186 | 0.0 | 2409 |
Msa0562120 | MtrunA17_Chr3g0136911 | 94.619 | 1208 | 42 | 3 | 3 | 1208 | 2 | 1188 | 0.0 | 2368 |
Msa0562120 | MtrunA17_Chr1g0155911 | 34.383 | 1207 | 680 | 28 | 52 | 1206 | 36 | 1182 | 0.0 | 656 |
Msa0562120 | MtrunA17_Chr3g0142441 | 93.919 | 296 | 18 | 0 | 582 | 877 | 2 | 297 | 0.0 | 578 |
Msa0562120 | MtrunA17_Chr3g0142431 | 95.510 | 245 | 11 | 0 | 964 | 1208 | 1 | 245 | 3.30e-165 | 489 |
Msa0562120 | MtrunA17_Chr8g0345421 | 29.397 | 1211 | 695 | 32 | 52 | 1206 | 24 | 1130 | 1.61e-140 | 455 |
Msa0562120 | MtrunA17_Chr4g0069391 | 26.555 | 1254 | 725 | 46 | 58 | 1204 | 31 | 1195 | 1.05e-89 | 315 |
Msa0562120 | MtrunA17_Chr3g0142451 | 93.137 | 102 | 7 | 0 | 452 | 553 | 1 | 102 | 1.08e-60 | 202 |
Msa0562120 | MtrunA17_Chr3g0142471 | 84.211 | 95 | 15 | 0 | 130 | 224 | 6 | 100 | 2.92e-50 | 174 |
Msa0562120 | MtrunA17_Chr3g0142481 | 80.303 | 66 | 8 | 2 | 4 | 67 | 3 | 65 | 1.29e-28 | 109 |
Msa0562120 | MtrunA17_Chr4g0016641 | 25.495 | 455 | 260 | 14 | 794 | 1201 | 636 | 1058 | 3.97e-28 | 123 |
Msa0562120 | MtrunA17_CPg0493041 | 25.495 | 455 | 260 | 14 | 794 | 1201 | 636 | 1058 | 3.97e-28 | 123 |
Msa0562120 | MtrunA17_Chr3g0142461 | 75.862 | 58 | 13 | 1 | 274 | 330 | 1 | 58 | 5.79e-22 | 90.5 |
Msa0562120 | MtrunA17_Chr1g0159041 | 24.916 | 297 | 179 | 9 | 733 | 1028 | 61 | 314 | 2.20e-15 | 79.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0562120 | AT3G23780.1 | 66.804 | 1214 | 337 | 16 | 17 | 1208 | 3 | 1172 | 0.0 | 1627 |
Msa0562120 | AT3G23780.2 | 66.804 | 1214 | 337 | 16 | 17 | 1208 | 3 | 1172 | 0.0 | 1627 |
Msa0562120 | AT3G18090.1 | 67.795 | 1093 | 293 | 12 | 135 | 1208 | 3 | 1055 | 0.0 | 1502 |
Msa0562120 | AT3G18090.2 | 64.839 | 930 | 268 | 12 | 135 | 1045 | 3 | 892 | 0.0 | 1206 |
Msa0562120 | AT3G18090.3 | 64.941 | 927 | 266 | 12 | 135 | 1042 | 3 | 889 | 0.0 | 1205 |
Msa0562120 | AT4G21710.1 | 33.790 | 1240 | 707 | 29 | 20 | 1206 | 1 | 1179 | 0.0 | 650 |
Msa0562120 | AT5G45140.2 | 30.629 | 1208 | 684 | 35 | 52 | 1199 | 39 | 1152 | 6.73e-146 | 471 |
Msa0562120 | AT5G45140.1 | 30.629 | 1208 | 684 | 35 | 52 | 1199 | 39 | 1152 | 6.73e-146 | 471 |
Msa0562120 | AT1G29940.1 | 25.297 | 1261 | 727 | 41 | 52 | 1204 | 16 | 1169 | 1.35e-86 | 306 |
Msa0562120 | AT5G45140.3 | 28.537 | 834 | 476 | 28 | 52 | 847 | 39 | 790 | 2.84e-72 | 259 |
Msa0562120 | ATCG00190.1 | 25.376 | 465 | 288 | 13 | 736 | 1155 | 577 | 1027 | 4.13e-27 | 120 |
Find 341 sgRNAs with CRISPR-Local
Find 570 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTGAAGACATTGTTAATTT+TGG | 0.068206 | 4_1:+61743271 | Msa0562120:CDS |
TTGTACGGAGATGGAAAATT+AGG | 0.151194 | 4_1:-61738173 | None:intergenic |
CAATTTCCAACCATTTATTT+TGG | 0.158782 | 4_1:-61746014 | None:intergenic |
AAAGCATCGACTCTTATATT+TGG | 0.162091 | 4_1:-61742965 | None:intergenic |
TGAATTGTTTAAACTTTAAA+AGG | 0.180768 | 4_1:+61745828 | Msa0562120:three_prime_UTR |
ACTTGATATGTCATTCTTAT+TGG | 0.202537 | 4_1:+61742835 | Msa0562120:CDS |
AGATGGAAAATTAGGGTTTA+TGG | 0.206152 | 4_1:-61738165 | None:intergenic |
TTGAACATCAACTTTCATTT+TGG | 0.208141 | 4_1:-61738628 | None:intergenic |
AAAGACAAAGTCTTCCTAAA+TGG | 0.218088 | 4_1:+61741621 | Msa0562120:CDS |
AAATAGGATGGTTGTTAAAT+TGG | 0.238146 | 4_1:+61740018 | Msa0562120:CDS |
GGTGCGATCACTAATATTTA+TGG | 0.247178 | 4_1:+61745205 | Msa0562120:CDS |
CAATATGCCACGGTTAAGTT+TGG | 0.252447 | 4_1:+61738501 | Msa0562120:CDS |
TTGAAGTCCTCTTCTTCTTC+AGG | 0.252661 | 4_1:-61742743 | None:intergenic |
AGTAATCTGCTCAAGATTAA+AGG | 0.253696 | 4_1:+61742656 | Msa0562120:CDS |
CCGAAGTCTGAATTCTATAA+TGG | 0.263295 | 4_1:+61743085 | Msa0562120:CDS |
CTTGATATGTCATTCTTATT+GGG | 0.263809 | 4_1:+61742836 | Msa0562120:CDS |
TTGGAGACCATTTGTAATAA+TGG | 0.265166 | 4_1:-61740617 | None:intergenic |
TATGTCTTTCCGAACATTAA+AGG | 0.270375 | 4_1:+61740349 | Msa0562120:CDS |
GCATGGACAGAAGGGTGTTT+TGG | 0.277868 | 4_1:+61743808 | Msa0562120:CDS |
GCCGAGTTCGTTGAGGATTT+CGG | 0.279917 | 4_1:-61738286 | None:intergenic |
TGGCCTGAGAAGAATGCTTC+TGG | 0.296378 | 4_1:-61742922 | None:intergenic |
ACTCTACCCTCCAAAATAAA+TGG | 0.297739 | 4_1:+61746004 | Msa0562120:three_prime_UTR |
CAAAGCTGAAATTGAGAATA+AGG | 0.300709 | 4_1:+61743225 | Msa0562120:CDS |
TTCTTAGAGGAACGTGTAAA+AGG | 0.305968 | 4_1:+61740280 | Msa0562120:CDS |
CTCCAGTAGAAAACGCTCTT+TGG | 0.308318 | 4_1:-61740636 | None:intergenic |
AGAAGTGATGAATTGATTAT+AGG | 0.315125 | 4_1:-61738391 | None:intergenic |
GCTCTGCAGAGAGACCTTTA+TGG | 0.316497 | 4_1:+61740553 | Msa0562120:CDS |
TGATGATACTATGACCGTTC+TGG | 0.319004 | 4_1:+61741593 | Msa0562120:CDS |
CCAAAATTAACAATGTCTTC+AGG | 0.325956 | 4_1:-61743271 | None:intergenic |
TGGTCAAGTCTGATCTTTGC+TGG | 0.326694 | 4_1:+61739285 | Msa0562120:CDS |
GGTTTCAAATATTCCGTATT+GGG | 0.328046 | 4_1:+61739967 | Msa0562120:CDS |
GGAAAGATACAGAGTAAAAT+TGG | 0.332933 | 4_1:+61743292 | Msa0562120:CDS |
GACAATAACTTTGCTCCATA+TGG | 0.333966 | 4_1:-61745572 | None:intergenic |
TGAGTTGGCTGGTGAGCTGC+TGG | 0.335127 | 4_1:+61740480 | Msa0562120:CDS |
TCATCAACACCTTTCTTAGA+AGG | 0.335400 | 4_1:-61738471 | None:intergenic |
CAGGTTAGAAGCCCAGTTCT+TGG | 0.335580 | 4_1:+61743767 | Msa0562120:intron |
CGATTTGGAGGTATCAAGTT+TGG | 0.336084 | 4_1:+61745335 | Msa0562120:CDS |
TAAATCTTTCCAGTCCCTAT+TGG | 0.337687 | 4_1:+61742694 | Msa0562120:CDS |
GAAAGTTGATGTTCAACTTC+AGG | 0.338634 | 4_1:+61738635 | Msa0562120:CDS |
AGTCACAGATGAAGAGAAAT+AGG | 0.340801 | 4_1:+61740002 | Msa0562120:CDS |
TATAATCAATTCATCACTTC+TGG | 0.341794 | 4_1:+61738393 | Msa0562120:CDS |
TGTGCTTTAGCTTTATACTA+TGG | 0.343766 | 4_1:-61743414 | None:intergenic |
AGATCAGACTTGACCATAAC+AGG | 0.353811 | 4_1:-61739278 | None:intergenic |
CAACGAACTCGGCGAAGATA+TGG | 0.356205 | 4_1:+61738296 | Msa0562120:CDS |
TTCCAGTCCCTATTGGATAA+TGG | 0.357748 | 4_1:+61742701 | Msa0562120:CDS |
AAGCATCGACTCTTATATTT+GGG | 0.358815 | 4_1:-61742964 | None:intergenic |
CCTGAATTTGACTTTGTCTT+CGG | 0.358897 | 4_1:-61745261 | None:intergenic |
CTCCAACCCAGTCCCCATTT+AGG | 0.359540 | 4_1:-61741635 | None:intergenic |
CGCTTGATCGACCTATGTTT+TGG | 0.361100 | 4_1:+61738532 | Msa0562120:CDS |
TGAGGATTTATAACAATATC+AGG | 0.362056 | 4_1:-61743881 | None:intergenic |
TCTGGTGTGGTTGCAACTCT+TGG | 0.363686 | 4_1:+61740694 | Msa0562120:CDS |
CAAACTTAACCGTGGCATAT+TGG | 0.364361 | 4_1:-61738500 | None:intergenic |
ATCGGGCGGTGTGCTGATTC+CGG | 0.370475 | 4_1:+61743385 | Msa0562120:CDS |
CAATCACGCCATTATCCAAT+AGG | 0.374576 | 4_1:-61742709 | None:intergenic |
TTCCTCAGCTGTTTGATTGT+GGG | 0.376159 | 4_1:+61741556 | Msa0562120:CDS |
TGCAAATTTGCTCCAACAAA+TGG | 0.377429 | 4_1:-61743346 | None:intergenic |
CCATTACCGACCAGCTTCAT+AGG | 0.377816 | 4_1:+61744020 | Msa0562120:CDS |
GGTTTATGGAGAAAGGGTTT+TGG | 0.378201 | 4_1:-61738151 | None:intergenic |
CACATGTCAAAAGTCTAGTC+TGG | 0.378337 | 4_1:-61745689 | None:intergenic |
GACGATGGCTTTCCATTTGT+TGG | 0.379683 | 4_1:+61743334 | Msa0562120:CDS |
TGTACGGAGATGGAAAATTA+GGG | 0.380407 | 4_1:-61738172 | None:intergenic |
GCGACAGGCTGTCGGGTCAA+TGG | 0.380744 | 4_1:-61745302 | None:intergenic |
ATTGTGGATCTCATTGATTA+TGG | 0.384113 | 4_1:+61740160 | Msa0562120:CDS |
GAGAACTTATCTCCAAGAAC+TGG | 0.386193 | 4_1:-61743779 | None:intergenic |
AAGTATTTCTGAAGAGGCTC+TGG | 0.386743 | 4_1:+61739945 | Msa0562120:CDS |
CCGAAGACAAAGTCAAATTC+AGG | 0.388621 | 4_1:+61745261 | Msa0562120:CDS |
TGTTCAGATCTGAGCATATA+AGG | 0.389042 | 4_1:+61743197 | Msa0562120:CDS |
AAGACAAAGTCTTCCTAAAT+GGG | 0.391964 | 4_1:+61741622 | Msa0562120:CDS |
CTGATGCACCGTGAGCTATC+AGG | 0.392438 | 4_1:-61745376 | None:intergenic |
GTGATCTTGCGACCGGTATC+TGG | 0.396475 | 4_1:+61745479 | Msa0562120:CDS |
GTCGCTGACAGGAAGCGATT+TGG | 0.397585 | 4_1:+61745320 | Msa0562120:CDS |
AGGTATCAAGTTTGGTGAAA+TGG | 0.397863 | 4_1:+61745343 | Msa0562120:CDS |
TTATCACTCCGAACCTTCTT+CGG | 0.400038 | 4_1:-61739176 | None:intergenic |
ACCCTTCTGTCCATGCATAC+TGG | 0.403623 | 4_1:-61743801 | None:intergenic |
TGGGGTGTTCAGTATTTGTT+TGG | 0.404123 | 4_1:+61742773 | Msa0562120:CDS |
AAAAGGATGGAAAGGATATC+TGG | 0.404544 | 4_1:+61740676 | Msa0562120:CDS |
ATTGATTATAGGAGTTGATT+TGG | 0.407015 | 4_1:-61738380 | None:intergenic |
GGGTTTCAAATATTCCGTAT+TGG | 0.410124 | 4_1:+61739966 | Msa0562120:CDS |
CAAGGGCATTCAAGAAAATC+AGG | 0.410711 | 4_1:-61745791 | None:intergenic |
GATGATACTATGACCGTTCT+GGG | 0.412400 | 4_1:+61741594 | Msa0562120:CDS |
CGGAGTGATAAGTTTAAGAC+TGG | 0.412464 | 4_1:+61739188 | Msa0562120:CDS |
AGAGGACTTCAAGACTGCTT+GGG | 0.413762 | 4_1:+61742754 | Msa0562120:CDS |
GACATGTGTACATATCAGTT+TGG | 0.415460 | 4_1:+61745704 | Msa0562120:three_prime_UTR |
CACACTCCACAGTACACTAA+TGG | 0.420856 | 4_1:+61738117 | Msa0562120:five_prime_UTR |
CCCAGAAAACTAACGAATGA+TGG | 0.422954 | 4_1:+61745876 | Msa0562120:three_prime_UTR |
GTACATATCAGTTTGGTTCA+TGG | 0.424772 | 4_1:+61745711 | Msa0562120:three_prime_UTR |
GTTGCAGGCATCCTTCTCAC+TGG | 0.426530 | 4_1:+61741430 | Msa0562120:intron |
TCCTGTCAGCGACAGGCTGT+CGG | 0.428603 | 4_1:-61745310 | None:intergenic |
CTTCCTCAGCTGTTTGATTG+TGG | 0.429680 | 4_1:+61741555 | Msa0562120:CDS |
AAGGATTCTCCGTCCACTCT+TGG | 0.429803 | 4_1:+61742628 | Msa0562120:CDS |
TTTCACCATCTGGGGTAGAA+AGG | 0.429958 | 4_1:-61741467 | None:intergenic |
CGACAGGCTGTCGGGTCAAT+GGG | 0.430294 | 4_1:-61745301 | None:intergenic |
CAATCCGCTTTCGATTCCTT+CGG | 0.431632 | 4_1:+61738420 | Msa0562120:CDS |
GTTCTTCTACTAGCGTATAC+TGG | 0.433697 | 4_1:+61740412 | Msa0562120:CDS |
ATGGAAGTTATGGCGCCTAT+TGG | 0.433721 | 4_1:+61739555 | Msa0562120:CDS |
GCATCCTTCTCACTGGGGTA+AGG | 0.434903 | 4_1:+61741437 | Msa0562120:CDS |
GAGAAGAATGCTTCTGGGAT+TGG | 0.435150 | 4_1:-61742916 | None:intergenic |
ACAACTACTAGAGGCTGCTT+TGG | 0.435996 | 4_1:+61743931 | Msa0562120:CDS |
GACGCTTCCATTATTACAAA+TGG | 0.436306 | 4_1:+61740610 | Msa0562120:CDS |
AATATGCCACGGTTAAGTTT+GGG | 0.436673 | 4_1:+61738502 | Msa0562120:CDS |
GTGCGATCACTAATATTTAT+GGG | 0.437084 | 4_1:+61745206 | Msa0562120:CDS |
AATTCAGCCATGGTTTGTAA+TGG | 0.438058 | 4_1:-61740727 | None:intergenic |
GGTCAAAATCCGCCACCAAT+AGG | 0.438920 | 4_1:-61739570 | None:intergenic |
CGAAGTCTGAATTCTATAAT+GGG | 0.440560 | 4_1:+61743086 | Msa0562120:CDS |
TGCTGTTGTTTCGTTAAGAC+AGG | 0.440677 | 4_1:+61743495 | Msa0562120:CDS |
TATTGGTAGACTGCCTGTTA+TGG | 0.440804 | 4_1:+61739265 | Msa0562120:CDS |
GAACATCTCGATCTCCATAA+AGG | 0.443290 | 4_1:-61740567 | None:intergenic |
AAACCAGTATGCAAAATTCC+TGG | 0.443902 | 4_1:-61745968 | None:intergenic |
AAATTAGGGTTTATGGAGAA+AGG | 0.444233 | 4_1:-61738158 | None:intergenic |
TCAGGTATATGTTCCGAAGA+AGG | 0.446001 | 4_1:+61739163 | Msa0562120:intron |
CCTTCTCAGCACCCTTGATC+AGG | 0.446573 | 4_1:-61739358 | None:intergenic |
GGTGATCTCACTGTTACGCC+AGG | 0.455533 | 4_1:+61738441 | Msa0562120:CDS |
CTCGGAAAACCTGGATATCT+AGG | 0.455828 | 4_1:+61743046 | Msa0562120:CDS |
CGAAAGGGGTTATGTTCAAA+AGG | 0.455941 | 4_1:+61743438 | Msa0562120:CDS |
TCGGGCGGTGTGCTGATTCC+GGG | 0.456470 | 4_1:+61743386 | Msa0562120:CDS |
CAACTACTAGAGGCTGCTTT+GGG | 0.457722 | 4_1:+61743932 | Msa0562120:CDS |
CCTGTCAGCGACAGGCTGTC+GGG | 0.459295 | 4_1:-61745309 | None:intergenic |
AGCCATGGTTTGTAATGGAT+TGG | 0.460916 | 4_1:-61740722 | None:intergenic |
CTAGAGGCTGCTTTGGGAAA+GGG | 0.461237 | 4_1:+61743938 | Msa0562120:CDS |
TTCAGTACACAGGAAAGGTC+GGG | 0.465796 | 4_1:+61740770 | Msa0562120:CDS |
AAGAGGACTTCAAGACTGCT+TGG | 0.469345 | 4_1:+61742753 | Msa0562120:CDS |
AAGCATTCTTCTCAGGCCAT+TGG | 0.470338 | 4_1:+61742926 | Msa0562120:CDS |
TTAAAAGGAATGCTCATATC+CGG | 0.473379 | 4_1:+61745843 | Msa0562120:three_prime_UTR |
TGTCGGGTCAATGGGTGAAC+TGG | 0.473461 | 4_1:-61745293 | None:intergenic |
CCTATGAAGCTGGTCGGTAA+TGG | 0.473583 | 4_1:-61744020 | None:intergenic |
TTTCCCTCACGACAAACTCC+TGG | 0.475136 | 4_1:+61743908 | Msa0562120:CDS |
GGCCTGAGAAGAATGCTTCT+GGG | 0.475788 | 4_1:-61742921 | None:intergenic |
CAGTATTTGTTTGGCAAAGA+GGG | 0.476056 | 4_1:+61742782 | Msa0562120:CDS |
GAGAAATGAGTTGCCTCATC+AGG | 0.476514 | 4_1:+61741707 | Msa0562120:CDS |
TGGAGGCTACTTCCTGATCA+AGG | 0.479532 | 4_1:+61739346 | Msa0562120:CDS |
GCAGACGCTGGTAGAATGTT+GGG | 0.481808 | 4_1:-61745229 | None:intergenic |
CCTCCATTGTTGTACGGAGA+TGG | 0.482921 | 4_1:-61738182 | None:intergenic |
TATTGATAGAGAGATGAAGT+TGG | 0.483212 | 4_1:+61739223 | Msa0562120:CDS |
TGGAGCAAAGTTATTGTCTC+AGG | 0.484390 | 4_1:+61745577 | Msa0562120:CDS |
TAAATGTGAAGCATTTCGTC+GGG | 0.484396 | 4_1:+61740240 | Msa0562120:CDS |
TTACTCTGACCTAGATATCC+AGG | 0.485264 | 4_1:-61743055 | None:intergenic |
TGTCATTAAATACTCATAAC+GGG | 0.485825 | 4_1:-61745751 | None:intergenic |
GCAGCCTCTAGTAGTTGTCC+AGG | 0.486041 | 4_1:-61743926 | None:intergenic |
AAGTCTTCCTAAATGGGGAC+TGG | 0.487711 | 4_1:+61741628 | Msa0562120:CDS |
TTCACAATGTGTGTACTTCA+CGG | 0.488577 | 4_1:-61742813 | None:intergenic |
GTGACAAGGGAAATAACTAT+TGG | 0.489012 | 4_1:+61739248 | Msa0562120:CDS |
CTGTCATTAAATACTCATAA+CGG | 0.489576 | 4_1:-61745752 | None:intergenic |
GTCTGAAAGAGTGGTCTTTG+TGG | 0.490054 | 4_1:-61743007 | None:intergenic |
TGTTTCCTTTCTACCCCAGA+TGG | 0.490279 | 4_1:+61741462 | Msa0562120:CDS |
CACATTTATCGTCTGCCTCA+CGG | 0.490360 | 4_1:-61740225 | None:intergenic |
TGGATGAGTGAAGCTGAAAA+AGG | 0.492402 | 4_1:+61739305 | Msa0562120:CDS |
CGCCATTATCCAATAGGGAC+TGG | 0.492490 | 4_1:-61742703 | None:intergenic |
TAACAGCATCTACACAGAAA+TGG | 0.493360 | 4_1:+61738230 | Msa0562120:CDS |
TGTTCTTCTTAATTCAGCCA+TGG | 0.493474 | 4_1:-61740737 | None:intergenic |
GTGTTATCCAATGGAAGTTA+TGG | 0.493869 | 4_1:+61739545 | Msa0562120:CDS |
CTGGTGTGGTTGCAACTCTT+GGG | 0.494422 | 4_1:+61740695 | Msa0562120:CDS |
TAGGATGGTTGTTAAATTGG+TGG | 0.495089 | 4_1:+61740021 | Msa0562120:CDS |
GGGTTTGATCCTTCTAAGAA+AGG | 0.495219 | 4_1:+61738462 | Msa0562120:CDS |
TTGCAGGCATCCTTCTCACT+GGG | 0.496735 | 4_1:+61741431 | Msa0562120:intron |
AATCGCTTCCTGTCAGCGAC+AGG | 0.499397 | 4_1:-61745317 | None:intergenic |
ATCCCAGAAGCATTCTTCTC+AGG | 0.500790 | 4_1:+61742919 | Msa0562120:CDS |
AATTAGGGTTTATGGAGAAA+GGG | 0.502974 | 4_1:-61738157 | None:intergenic |
GCACATGCTCGGAAGCGAAT+GGG | 0.505224 | 4_1:+61740526 | Msa0562120:CDS |
GGTCAATGGGTGAACTGGAC+CGG | 0.505931 | 4_1:-61745288 | None:intergenic |
AATAAGAGGCTTGAGTTGGC+TGG | 0.507515 | 4_1:+61740469 | Msa0562120:CDS |
TCTGATTGTCTCGGAAAACC+TGG | 0.509474 | 4_1:+61743037 | Msa0562120:CDS |
CGAGTATACAACGGGAGGAC+CGG | 0.510416 | 4_1:+61745176 | Msa0562120:CDS |
CCCGACAGCCTGTCGCTGAC+AGG | 0.511250 | 4_1:+61745309 | Msa0562120:CDS |
CCTGATCAAGGGTGCTGAGA+AGG | 0.511307 | 4_1:+61739358 | Msa0562120:CDS |
GCATGGTCATGATTTGCAAA+TGG | 0.512791 | 4_1:-61742878 | None:intergenic |
TATATGTTCCGAAGAAGGTT+CGG | 0.514071 | 4_1:+61739168 | Msa0562120:CDS |
ACATGTCAAAAGTCTAGTCT+GGG | 0.514827 | 4_1:-61745688 | None:intergenic |
TTGCAAATCATGACCATGCT+AGG | 0.514874 | 4_1:+61742882 | Msa0562120:CDS |
TCGAAATAAGAGGCTTGAGT+TGG | 0.515093 | 4_1:+61740465 | Msa0562120:CDS |
CTCCAGTATGCATGGACAGA+AGG | 0.515563 | 4_1:+61743799 | Msa0562120:CDS |
GCATTCAAGAAAATCAGGTT+AGG | 0.516191 | 4_1:-61745786 | None:intergenic |
AATCACGCCATTATCCAATA+GGG | 0.516901 | 4_1:-61742708 | None:intergenic |
CATGGACACATCCTTTCAAA+AGG | 0.518074 | 4_1:+61740659 | Msa0562120:CDS |
ACTAGAGGCTGCTTTGGGAA+AGG | 0.518204 | 4_1:+61743937 | Msa0562120:CDS |
GACACATCCTTTCAAAAGGA+TGG | 0.521759 | 4_1:+61740663 | Msa0562120:CDS |
AATGGCTTCAACAGAGGAAG+TGG | 0.521973 | 4_1:-61744002 | None:intergenic |
GTTGTGGCCAGTGTTCCATA+TGG | 0.522270 | 4_1:+61745557 | Msa0562120:CDS |
GAAGTTATGGCGCCTATTGG+TGG | 0.523216 | 4_1:+61739558 | Msa0562120:CDS |
TTCAAAAGAAAACAAATGCA+AGG | 0.523565 | 4_1:-61745809 | None:intergenic |
GGAAAGGGCATCGCTTGTGT+TGG | 0.523598 | 4_1:+61743953 | Msa0562120:CDS |
TGCAGACGCTGGTAGAATGT+TGG | 0.525149 | 4_1:-61745230 | None:intergenic |
AAGTGCACTTTGCACATGCT+CGG | 0.525576 | 4_1:+61740515 | Msa0562120:CDS |
TACCCTCCAAAATAAATGGT+TGG | 0.525871 | 4_1:+61746008 | Msa0562120:three_prime_UTR |
ATATAATCAAGAAGATTCCT+TGG | 0.528881 | 4_1:+61743144 | Msa0562120:CDS |
GTCTCAGGAGCTGTTCAGCA+TGG | 0.529733 | 4_1:+61745592 | Msa0562120:CDS |
TGCACATGCTCGGAAGCGAA+TGG | 0.531358 | 4_1:+61740525 | Msa0562120:CDS |
AAAGCTAAAGCACACCGAAA+GGG | 0.531794 | 4_1:+61743423 | Msa0562120:CDS |
ATGGAAAGCCATCGTCATCA+AGG | 0.531870 | 4_1:-61743327 | None:intergenic |
TCAACAGAGGAAGTGGAGAA+AGG | 0.532899 | 4_1:-61743995 | None:intergenic |
ATCCTTTCAAAAGGATGGAA+AGG | 0.537841 | 4_1:+61740668 | Msa0562120:CDS |
ATCTTCCGTCCACCAGATAC+CGG | 0.538540 | 4_1:-61745491 | None:intergenic |
CACTTCAGATAAAGAGATTG+TGG | 0.539018 | 4_1:+61740144 | Msa0562120:CDS |
GGAACGAACGAGTATACAAC+GGG | 0.539991 | 4_1:+61745168 | Msa0562120:CDS |
GGCTAGGTACCTAGCTTACA+TGG | 0.542880 | 4_1:+61740384 | Msa0562120:CDS |
GATTAAAAGCGAACCTGATG+AGG | 0.544004 | 4_1:-61741720 | None:intergenic |
AGTATTTCTGAAGAGGCTCT+GGG | 0.546085 | 4_1:+61739946 | Msa0562120:CDS |
TGCTCGGAAGCGAATGGGAA+AGG | 0.548332 | 4_1:+61740531 | Msa0562120:CDS |
ATGGTTGTTAAATTGGTGGA+AGG | 0.549390 | 4_1:+61740025 | Msa0562120:CDS |
TTAACCGTGGCATATTGGTA+AGG | 0.551639 | 4_1:-61738495 | None:intergenic |
TTGAAAGCAACAGCCCAATA+CGG | 0.551751 | 4_1:-61739980 | None:intergenic |
CTTTGCTCCATATGGAACAC+TGG | 0.552473 | 4_1:-61745564 | None:intergenic |
CCAGAAAACTAACGAATGAT+GGG | 0.553086 | 4_1:+61745877 | Msa0562120:three_prime_UTR |
AATGGCGTGATTGAGCTGAT+TGG | 0.554573 | 4_1:+61742719 | Msa0562120:CDS |
CAACGGGAGGACCGGTGAGA+TGG | 0.554842 | 4_1:+61745184 | Msa0562120:CDS |
TCCACAGAGGGAATTACAAA+CGG | 0.555312 | 4_1:+61740049 | Msa0562120:CDS |
TGGAAGATTACCTATGAAGC+TGG | 0.555512 | 4_1:-61744030 | None:intergenic |
GTCATGTTCTTCGATCAATA+CGG | 0.556617 | 4_1:+61738345 | Msa0562120:CDS |
TGTCTGTTGAGATACCTGTA+TGG | 0.556862 | 4_1:+61740098 | Msa0562120:CDS |
GAACCTTCACCATGTAAGCT+AGG | 0.558023 | 4_1:-61740393 | None:intergenic |
GTGCGCATATTATCTGATGC+AGG | 0.558870 | 4_1:+61742605 | Msa0562120:CDS |
CTCTGCAACCTAGCATGTCT+AGG | 0.559394 | 4_1:-61738591 | None:intergenic |
ATAGGCGCCATAACTTCCAT+TGG | 0.559452 | 4_1:-61739552 | None:intergenic |
TCCGAAATCCTCAACGAACT+CGG | 0.561562 | 4_1:+61738285 | Msa0562120:CDS |
CAGAGTGGCGATATTATCAT+CGG | 0.562633 | 4_1:+61743367 | Msa0562120:CDS |
TTCCTAAATGGGGACTGGGT+TGG | 0.562779 | 4_1:+61741633 | Msa0562120:CDS |
GCTGACAGGAAGCGATTTGG+AGG | 0.563584 | 4_1:+61745323 | Msa0562120:CDS |
GATTGGTCCTGAAGAAGAAG+AGG | 0.564149 | 4_1:+61742736 | Msa0562120:CDS |
TGGGCAAAAGCAACTTTCCA+CGG | 0.564251 | 4_1:-61738041 | None:intergenic |
GTTATGGCGCCTATTGGTGG+CGG | 0.564524 | 4_1:+61739561 | Msa0562120:CDS |
TCAGTATTTGTTTGGCAAAG+AGG | 0.564795 | 4_1:+61742781 | Msa0562120:CDS |
AGTCTTCCTAAATGGGGACT+GGG | 0.566659 | 4_1:+61741629 | Msa0562120:CDS |
CACTCGTCAATAGATTCTGC+GGG | 0.567248 | 4_1:-61740316 | None:intergenic |
CTTTATACTATGGTCCATCC+CGG | 0.567441 | 4_1:-61743404 | None:intergenic |
CATCGGCTGATTCACAGAAA+CGG | 0.567577 | 4_1:-61745529 | None:intergenic |
GATGTCATTGTCTGAAAGAG+TGG | 0.567955 | 4_1:-61743016 | None:intergenic |
TAAAGCTAAAGCACACCGAA+AGG | 0.569174 | 4_1:+61743422 | Msa0562120:CDS |
GTTCAGTACACAGGAAAGGT+CGG | 0.569216 | 4_1:+61740769 | Msa0562120:CDS |
AAGCTAAAGCACACCGAAAG+GGG | 0.569664 | 4_1:+61743424 | Msa0562120:CDS |
AATTTCCCCTTCACAAAACA+AGG | 0.569701 | 4_1:+61743851 | Msa0562120:CDS |
AAGAGCAAGTATTTCTGAAG+AGG | 0.570747 | 4_1:+61739939 | Msa0562120:CDS |
GATAAGTTCTCCAGTATGCA+TGG | 0.571930 | 4_1:+61743791 | Msa0562120:CDS |
TTGGTGGAAGGTTCCACAGA+GGG | 0.572533 | 4_1:+61740037 | Msa0562120:CDS |
TGATCAGGAAGTAGCCTCCA+TGG | 0.573050 | 4_1:-61739343 | None:intergenic |
TCTCAGGAGCTGTTCAGCAT+GGG | 0.574908 | 4_1:+61745593 | Msa0562120:CDS |
GTTTGTTGTAGCAAAGCCAA+TGG | 0.577013 | 4_1:-61742942 | None:intergenic |
GATTCACAGAAACGGCAATA+CGG | 0.579961 | 4_1:-61745521 | None:intergenic |
CGGACATGTGGTGCAGACGC+TGG | 0.580564 | 4_1:-61745241 | None:intergenic |
ACCCCAGATGGTGAAAATTG+TGG | 0.580727 | 4_1:+61741474 | Msa0562120:CDS |
TTTCCATCTCCGTACAACAA+TGG | 0.580751 | 4_1:+61738179 | Msa0562120:exon |
TCCAGTATGCATGGACAGAA+GGG | 0.580759 | 4_1:+61743800 | Msa0562120:CDS |
AGATGAAGTTGGATGTGACA+AGG | 0.580831 | 4_1:+61739234 | Msa0562120:CDS |
GTATCTGAGACGAATCACTC+AGG | 0.581128 | 4_1:-61745424 | None:intergenic |
ATTGATTATGGAGAGTCAGA+TGG | 0.582505 | 4_1:+61740172 | Msa0562120:CDS |
AACCAATCCATTACAAACCA+TGG | 0.584723 | 4_1:+61740720 | Msa0562120:CDS |
TCAGCTGTTTGATTGTGGGA+TGG | 0.584783 | 4_1:+61741560 | Msa0562120:CDS |
GTGGCTGTCAATGTACATCT+CGG | 0.586094 | 4_1:+61743121 | Msa0562120:CDS |
CAAGATTAAAGGATCTAAGT+CGG | 0.586587 | 4_1:+61742667 | Msa0562120:CDS |
TCTGGTGGACGGAAGATTCG+AGG | 0.586643 | 4_1:+61745497 | Msa0562120:CDS |
TGTGATCCTCCATTGTTGTA+CGG | 0.586998 | 4_1:-61738188 | None:intergenic |
TTTAGTACAGTGTTATCCAA+TGG | 0.588404 | 4_1:+61739536 | Msa0562120:intron |
ACGAATCACTCAGGGTGAAG+AGG | 0.588585 | 4_1:-61745415 | None:intergenic |
TAGTGATCGCACCATCTCAC+CGG | 0.588611 | 4_1:-61745195 | None:intergenic |
GTCGGTAATGGCTTCAACAG+AGG | 0.589189 | 4_1:-61744008 | None:intergenic |
CAAAAGCAACTTTCCACGGT+GGG | 0.589590 | 4_1:-61738037 | None:intergenic |
GGAGGCTACTTCCTGATCAA+GGG | 0.590334 | 4_1:+61739347 | Msa0562120:CDS |
TCAAAAGAAAACAAATGCAA+GGG | 0.590781 | 4_1:-61745808 | None:intergenic |
GATCTTCTTCTTCATCGTTG+AGG | 0.591151 | 4_1:-61738260 | None:intergenic |
GTACCTAGCTTACATGGTGA+AGG | 0.591244 | 4_1:+61740390 | Msa0562120:CDS |
GATGAAGTTGGATGTGACAA+GGG | 0.592313 | 4_1:+61739235 | Msa0562120:CDS |
AGTTCGTTGAGGATTTCGGA+TGG | 0.593774 | 4_1:-61738282 | None:intergenic |
TAGCTCTGCTACAAATGATG+TGG | 0.594428 | 4_1:-61741670 | None:intergenic |
GTCTTTGTGGATAAAACAGT+TGG | 0.594545 | 4_1:-61742994 | None:intergenic |
CAGAGCTACGAAATAGAAGA+CGG | 0.594914 | 4_1:+61741685 | Msa0562120:CDS |
CGTGATTGCCTGATAGCTCA+CGG | 0.596157 | 4_1:+61745368 | Msa0562120:CDS |
TATCTTCGCCGAGTTCGTTG+AGG | 0.597949 | 4_1:-61738293 | None:intergenic |
GAGGACTTCAAGACTGCTTG+GGG | 0.598252 | 4_1:+61742755 | Msa0562120:CDS |
AGATGCTTCCTAGACATGCT+AGG | 0.598908 | 4_1:+61738583 | Msa0562120:CDS |
GCGGTGTGCTGATTCCGGGA+TGG | 0.600016 | 4_1:+61743390 | Msa0562120:CDS |
TGTCCAGGAGTTTGTCGTGA+GGG | 0.601258 | 4_1:-61743911 | None:intergenic |
TACTAACAACCAAGAGTGGA+CGG | 0.601761 | 4_1:-61742637 | None:intergenic |
GCACTCGTCAATAGATTCTG+CGG | 0.603702 | 4_1:-61740317 | None:intergenic |
TTTATCGTCTGCCTCACGGA+TGG | 0.604454 | 4_1:-61740221 | None:intergenic |
GTGATCTCACTGTTACGCCA+GGG | 0.604749 | 4_1:+61738442 | Msa0562120:CDS |
TCCGTTTGTAATTCCCTCTG+TGG | 0.605063 | 4_1:-61740050 | None:intergenic |
CCATTATAGAATTCAGACTT+CGG | 0.606648 | 4_1:-61743085 | None:intergenic |
ACTGGCCACAACAATGTCAT+CGG | 0.608049 | 4_1:-61745546 | None:intergenic |
CCTTCACCACACCAAAACAT+AGG | 0.609051 | 4_1:-61738543 | None:intergenic |
CTAGACATGCTAGGTTGCAG+AGG | 0.609543 | 4_1:+61738592 | Msa0562120:CDS |
AAGTACAGATTCAGTTACAT+TGG | 0.610374 | 4_1:-61741535 | None:intergenic |
TGACTTTGTCTTCGGACATG+TGG | 0.610967 | 4_1:-61745253 | None:intergenic |
TTCTTAGAAGGATCAAACCC+TGG | 0.612962 | 4_1:-61738459 | None:intergenic |
GTGCTGTCTTCGAATGATGA+GGG | 0.614672 | 4_1:+61743463 | Msa0562120:CDS |
ATAAATGTGAAGCATTTCGT+CGG | 0.614768 | 4_1:+61740239 | Msa0562120:CDS |
TGCGACCGGTATCTGGTGGA+CGG | 0.619004 | 4_1:+61745486 | Msa0562120:CDS |
CCATCTCCGTACAACAATGG+AGG | 0.620777 | 4_1:+61738182 | Msa0562120:exon |
AGAGTGGCGATATTATCATC+GGG | 0.621079 | 4_1:+61743368 | Msa0562120:CDS |
CAAACCTTACCCCAGTGAGA+AGG | 0.623788 | 4_1:-61741441 | None:intergenic |
AGAACTTATCTCCAAGAACT+GGG | 0.626557 | 4_1:-61743778 | None:intergenic |
AGATTACCTATGAAGCTGGT+CGG | 0.626725 | 4_1:-61744026 | None:intergenic |
ACAGATGAAGAGAAATAGGA+TGG | 0.628812 | 4_1:+61740006 | Msa0562120:CDS |
TGCAAATGTGATCTTGCGAC+CGG | 0.628861 | 4_1:+61745472 | Msa0562120:CDS |
GGTACAACACTCTCCTAGCA+TGG | 0.629214 | 4_1:-61742895 | None:intergenic |
TAATGGGCAGAATGCAATTG+TGG | 0.631335 | 4_1:+61743102 | Msa0562120:CDS |
TTTACTCCATTAGTGTACTG+TGG | 0.635262 | 4_1:-61738123 | None:intergenic |
AACTCCTGGACAACTACTAG+AGG | 0.636159 | 4_1:+61743922 | Msa0562120:CDS |
TCGTCAATAGATTCTGCGGG+TGG | 0.637226 | 4_1:-61740313 | None:intergenic |
GCATATTATCTGATGCAGGA+AGG | 0.637268 | 4_1:+61742609 | Msa0562120:CDS |
TCAGTACACAGGAAAGGTCG+GGG | 0.637306 | 4_1:+61740771 | Msa0562120:CDS |
GGAGTGATAAGTTTAAGACT+GGG | 0.637929 | 4_1:+61739189 | Msa0562120:CDS |
AGATGGTGAAAATTGTGGAC+TGG | 0.638877 | 4_1:+61741479 | Msa0562120:CDS |
TGTCGTGAGGGAAATGCGTG+AGG | 0.639262 | 4_1:-61743899 | None:intergenic |
GTCTGGGGAAAGCATTAGAG+AGG | 0.640703 | 4_1:-61745672 | None:intergenic |
AAAGTCAAATTCAGGAACAC+CGG | 0.652540 | 4_1:+61745269 | Msa0562120:CDS |
ACAATGACATCTGATTGTCT+CGG | 0.654031 | 4_1:+61743028 | Msa0562120:CDS |
TACCTCGTTGCAAAGAAGCA+CGG | 0.655926 | 4_1:-61743174 | None:intergenic |
ACAAGTTCAGTACACAGGAA+AGG | 0.656004 | 4_1:+61740765 | Msa0562120:CDS |
ACAACAATGGAGGATCACAT+AGG | 0.657465 | 4_1:+61738192 | Msa0562120:exon |
AGACAAAGTCTTCCTAAATG+GGG | 0.658835 | 4_1:+61741623 | Msa0562120:CDS |
ATCAGCCGATGACATTGTTG+TGG | 0.659651 | 4_1:+61745541 | Msa0562120:CDS |
ATCCCACAATCAAACAGCTG+AGG | 0.660109 | 4_1:-61741558 | None:intergenic |
AGAAGCACGGTTCATAACCA+AGG | 0.662007 | 4_1:-61743161 | None:intergenic |
TGTGCTGTCTTCGAATGATG+AGG | 0.662109 | 4_1:+61743462 | Msa0562120:CDS |
GTTGGAGCAAATTTGCAGAG+TGG | 0.662192 | 4_1:+61743352 | Msa0562120:CDS |
ATCACCGAAGGAATCGAAAG+CGG | 0.665906 | 4_1:-61738424 | None:intergenic |
TATCTGAGACGAATCACTCA+GGG | 0.666324 | 4_1:-61745423 | None:intergenic |
TGAACCTTACCAATATGCCA+CGG | 0.667536 | 4_1:+61738491 | Msa0562120:CDS |
ATCTTGCGACCGGTATCTGG+TGG | 0.669773 | 4_1:+61745482 | Msa0562120:CDS |
GTTGATAGCCTTGATGACGA+TGG | 0.670992 | 4_1:+61743319 | Msa0562120:CDS |
CGTAACAGTGAGATCACCGA+AGG | 0.674189 | 4_1:-61738436 | None:intergenic |
TGCTGTCTTCGAATGATGAG+GGG | 0.676097 | 4_1:+61743464 | Msa0562120:CDS |
AGATTACTAACAACCAAGAG+TGG | 0.676652 | 4_1:-61742641 | None:intergenic |
AGGCAACAAGTTCAGTACAC+AGG | 0.677661 | 4_1:+61740760 | Msa0562120:CDS |
AACCGTGCTTCTTTGCAACG+AGG | 0.677944 | 4_1:+61743172 | Msa0562120:CDS |
CGCCATTCACCACATCGACG+AGG | 0.681877 | 4_1:-61739591 | None:intergenic |
CACATTCCCAAACTTAACCG+TGG | 0.682482 | 4_1:-61738508 | None:intergenic |
CATGTCAAAAGTCTAGTCTG+GGG | 0.689377 | 4_1:-61745687 | None:intergenic |
TGCAGGCATCCTTCTCACTG+GGG | 0.689696 | 4_1:+61741432 | Msa0562120:intron |
ACGAACGAGTATACAACGGG+AGG | 0.689778 | 4_1:+61745171 | Msa0562120:CDS |
TTGTCCAGGAGTTTGTCGTG+AGG | 0.693746 | 4_1:-61743912 | None:intergenic |
GCAAAAGCAACTTTCCACGG+TGG | 0.696607 | 4_1:-61738038 | None:intergenic |
ATGATACTATGACCGTTCTG+GGG | 0.703583 | 4_1:+61741595 | Msa0562120:CDS |
GGTGACTGTGAATTTGACCA+TGG | 0.715593 | 4_1:+61739326 | Msa0562120:CDS |
GATGGAAAGGATATCTGGTG+TGG | 0.721811 | 4_1:+61740681 | Msa0562120:CDS |
TCTATTTGCATCCATCCGTG+AGG | 0.723330 | 4_1:+61740210 | Msa0562120:CDS |
AAATGTGAAGCATTTCGTCG+GGG | 0.727913 | 4_1:+61740241 | Msa0562120:CDS |
GGGAACGAACGAGTATACAA+CGG | 0.731907 | 4_1:+61745167 | Msa0562120:CDS |
TGGCTGAATTAAGAAGAACA+AGG | 0.738169 | 4_1:+61740740 | Msa0562120:CDS |
GTGGCGATATTATCATCGGG+CGG | 0.751163 | 4_1:+61743371 | Msa0562120:CDS |
ATTGGTGGAAGGTTCCACAG+AGG | 0.777121 | 4_1:+61740036 | Msa0562120:CDS |
GACTGTGAATTTGACCATGG+AGG | 0.784934 | 4_1:+61739329 | Msa0562120:CDS |
GTATTGATCGAAGAACATGA+CGG | 0.801822 | 4_1:-61738343 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATATATAAAATATGACAA+AGG | - | chr4_1:61741748-61741767 | None:intergenic | 10.0% |
!! | AAAGTTATTATATTCAATAA+AGG | - | chr4_1:61741945-61741964 | None:intergenic | 10.0% |
!!! | AATAATCACCATTTTTTTTT+GGG | - | chr4_1:61738063-61738082 | None:intergenic | 15.0% |
!!! | TTTTTTACTTGAAAATTACT+TGG | + | chr4_1:61738758-61738777 | Msa0562120:intron | 15.0% |
!!! | TTTTTACTTGAAAATTACTT+GGG | + | chr4_1:61738759-61738778 | Msa0562120:intron | 15.0% |
!!! | TAAACAATTGTGAATTTTAT+TGG | - | chr4_1:61739469-61739488 | None:intergenic | 15.0% |
!! | ATAAAATTCACAATTGTTTA+TGG | + | chr4_1:61739469-61739488 | Msa0562120:intron | 15.0% |
!!! | TAAAAAAATTGCATTTTGAT+TGG | + | chr4_1:61739762-61739781 | Msa0562120:intron | 15.0% |
!!! | AAAAAAATTGCATTTTGATT+GGG | + | chr4_1:61739763-61739782 | Msa0562120:intron | 15.0% |
!! | TAAAACTAAATAAAATTACC+TGG | + | chr4_1:61740988-61741007 | Msa0562120:intron | 15.0% |
!!! | TATTTTTTATATATTGAACC+AGG | - | chr4_1:61742447-61742466 | None:intergenic | 15.0% |
!!! | TGTTATTTAATAAAATTTGC+AGG | + | chr4_1:61743748-61743767 | Msa0562120:intron | 15.0% |
!! | TGAATTGTTTAAACTTTAAA+AGG | + | chr4_1:61745828-61745847 | Msa0562120:three_prime_UTR | 15.0% |
!!! | TTATTTATTATATTTTTGCC+AGG | + | chr4_1:61745950-61745969 | Msa0562120:three_prime_UTR | 15.0% |
!!! | CAATAATCACCATTTTTTTT+TGG | - | chr4_1:61738064-61738083 | None:intergenic | 20.0% |
!!! | TAAGTTTTCATTTTGAAATG+TGG | + | chr4_1:61738675-61738694 | Msa0562120:intron | 20.0% |
!!! | AAGTTTTCATTTTGAAATGT+GGG | + | chr4_1:61738676-61738695 | Msa0562120:intron | 20.0% |
!!! | TTGATGTTCATTTTAAAATG+TGG | + | chr4_1:61738938-61738957 | Msa0562120:intron | 20.0% |
!!! | TGATGTTCATTTTAAAATGT+GGG | + | chr4_1:61738939-61738958 | Msa0562120:intron | 20.0% |
!! | AATTTAACAAAGTTTATGCA+GGG | - | chr4_1:61739500-61739519 | None:intergenic | 20.0% |
!! | AAATTTAACAAAGTTTATGC+AGG | - | chr4_1:61739501-61739520 | None:intergenic | 20.0% |
!!! | TTGTAAAATGTTTTCAAAAC+AGG | + | chr4_1:61739713-61739732 | Msa0562120:intron | 20.0% |
!!! | TGTAAAATGTTTTCAAAACA+GGG | + | chr4_1:61739714-61739733 | Msa0562120:intron | 20.0% |
!!! | CTTTTTAATCCTTTAATGTT+CGG | - | chr4_1:61740361-61740380 | None:intergenic | 20.0% |
!! | CATTAAAGGATTAAAAAGAA+AGG | + | chr4_1:61740363-61740382 | Msa0562120:CDS | 20.0% |
!! | TAGAAGTTAAAAGTAACTTA+CGG | - | chr4_1:61740808-61740827 | None:intergenic | 20.0% |
!!! | GTTCATATTTAACTTTCATT+CGG | - | chr4_1:61740881-61740900 | None:intergenic | 20.0% |
!!! | ACTGCTTTCATTTATTTTAA+TGG | + | chr4_1:61741398-61741417 | Msa0562120:intron | 20.0% |
!!! | TTTATTTTAATGGAAGCTTA+TGG | + | chr4_1:61741408-61741427 | Msa0562120:intron | 20.0% |
!! | ACGTTAATTAACAAATAACA+TGG | + | chr4_1:61741892-61741911 | Msa0562120:intron | 20.0% |
!!! | TTGTTCTCTATTTCTATAAA+AGG | - | chr4_1:61742230-61742249 | None:intergenic | 20.0% |
!!! | ATCATCATTAAAGTAGTTTT+TGG | - | chr4_1:61743533-61743552 | None:intergenic | 20.0% |
!! | AAAAAATTAGATTTCAGTTG+TGG | - | chr4_1:61743694-61743713 | None:intergenic | 20.0% |
!! | TAAAGTAAACTAAATCATGA+TGG | - | chr4_1:61744053-61744072 | None:intergenic | 20.0% |
!!! | TGGTTAATTGTATTTTATGT+AGG | + | chr4_1:61744083-61744102 | Msa0562120:intron | 20.0% |
!! | GTATATATTTCTCAAAATTC+AGG | + | chr4_1:61744427-61744446 | Msa0562120:intron | 20.0% |
!!! | ACTATTTTTTCAGTTCAATA+TGG | + | chr4_1:61744854-61744873 | Msa0562120:intron | 20.0% |
!! | TGCAATGTACAATATAAATA+GGG | - | chr4_1:61745127-61745146 | None:intergenic | 20.0% |
!! | ATTGATTATAGGAGTTGATT+TGG | - | chr4_1:61738383-61738402 | None:intergenic | 25.0% |
! | AGAAGTGATGAATTGATTAT+AGG | - | chr4_1:61738394-61738413 | None:intergenic | 25.0% |
! | TATAATCAATTCATCACTTC+TGG | + | chr4_1:61738393-61738412 | Msa0562120:CDS | 25.0% |
!! | TTGAACATCAACTTTCATTT+TGG | - | chr4_1:61738631-61738650 | None:intergenic | 25.0% |
!! | TTTTGACGTTAAAATCACTA+CGG | + | chr4_1:61739021-61739040 | Msa0562120:intron | 25.0% |
! | AAAACACACACAAAAATCAA+AGG | - | chr4_1:61739050-61739069 | None:intergenic | 25.0% |
!!! | TTACTGATTATGTACGTTTT+AGG | + | chr4_1:61739425-61739444 | Msa0562120:intron | 25.0% |
!!! | TACTGATTATGTACGTTTTA+GGG | + | chr4_1:61739426-61739445 | Msa0562120:intron | 25.0% |
! | AAATAGGATGGTTGTTAAAT+TGG | + | chr4_1:61740018-61740037 | Msa0562120:CDS | 25.0% |
! | AGAAGTTAAAAGTAACTTAC+GGG | - | chr4_1:61740807-61740826 | None:intergenic | 25.0% |
! | TTCACATGTTTAAGTAGTTT+AGG | - | chr4_1:61740931-61740950 | None:intergenic | 25.0% |
! | TAAACTACTTAAACATGTGA+AGG | + | chr4_1:61740930-61740949 | Msa0562120:intron | 25.0% |
!!! | GTTTTAGTTTTCTTGTTGAT+TGG | - | chr4_1:61740974-61740993 | None:intergenic | 25.0% |
! | ACAGTACATTCTAAATGAAA+TGG | + | chr4_1:61741138-61741157 | Msa0562120:intron | 25.0% |
! | TACATTCTAAATGAAATGGT+TGG | + | chr4_1:61741142-61741161 | Msa0562120:intron | 25.0% |
! | ACATTCTAAATGAAATGGTT+GGG | + | chr4_1:61741143-61741162 | Msa0562120:intron | 25.0% |
! | TAAAGAAGAGATTCATTTAC+AGG | - | chr4_1:61741187-61741206 | None:intergenic | 25.0% |
! | ATGGTTATGTATTAAGTATC+TGG | + | chr4_1:61741911-61741930 | Msa0562120:intron | 25.0% |
! | TTGTCCAACATATGATTAAA+TGG | + | chr4_1:61741977-61741996 | Msa0562120:intron | 25.0% |
! | CTAACCATTTAATCATATGT+TGG | - | chr4_1:61741984-61742003 | None:intergenic | 25.0% |
! | TATAAATCAATCTTTGACAG+AGG | - | chr4_1:61742107-61742126 | None:intergenic | 25.0% |
! | AAGTTCCAAAACTGAAATAA+TGG | - | chr4_1:61742180-61742199 | None:intergenic | 25.0% |
! | AATAGAGAACAACAACTTAA+AGG | + | chr4_1:61742238-61742257 | Msa0562120:intron | 25.0% |
! | ATAGAGAACAACAACTTAAA+GGG | + | chr4_1:61742239-61742258 | Msa0562120:intron | 25.0% |
! | AAATGTGAAAAAAGCAGTAT+TGG | - | chr4_1:61742348-61742367 | None:intergenic | 25.0% |
! | CATAATTGAAAACATAACGT+AGG | - | chr4_1:61742377-61742396 | None:intergenic | 25.0% |
! | TTGAACCAGGAAAAAAAATA+GGG | - | chr4_1:61742434-61742453 | None:intergenic | 25.0% |
! | ATTGAACCAGGAAAAAAAAT+AGG | - | chr4_1:61742435-61742454 | None:intergenic | 25.0% |
! | ACTTGATATGTCATTCTTAT+TGG | + | chr4_1:61742835-61742854 | Msa0562120:CDS | 25.0% |
! | CTTGATATGTCATTCTTATT+GGG | + | chr4_1:61742836-61742855 | Msa0562120:CDS | 25.0% |
! | ATATAATCAAGAAGATTCCT+TGG | + | chr4_1:61743144-61743163 | Msa0562120:CDS | 25.0% |
!!! | TCTTATGGACGAATTTTTTA+GGG | + | chr4_1:61743561-61743580 | Msa0562120:intron | 25.0% |
! | TTAAATAACAGCTTTCTTAG+TGG | - | chr4_1:61743738-61743757 | None:intergenic | 25.0% |
! | TGAGGATTTATAACAATATC+AGG | - | chr4_1:61743884-61743903 | None:intergenic | 25.0% |
!! | GTTTACTTTAATTGCAGTTT+TGG | + | chr4_1:61744063-61744082 | Msa0562120:intron | 25.0% |
!!! | TTTTTTAATGAATCGTGAAC+AGG | - | chr4_1:61744109-61744128 | None:intergenic | 25.0% |
!!! | TTTACTTTAAAACCCAGTTT+GGG | + | chr4_1:61744189-61744208 | Msa0562120:intron | 25.0% |
! | TTCATTCCATTCATTGAATT+TGG | - | chr4_1:61744578-61744597 | None:intergenic | 25.0% |
!! | GTAGATCTTTAAAAAAACAC+AGG | - | chr4_1:61744652-61744671 | None:intergenic | 25.0% |
!!! | TTTTTCAGTTCAATATGGTT+CGG | + | chr4_1:61744859-61744878 | Msa0562120:intron | 25.0% |
! | GCAAAGACATTATTGTTAAA+TGG | - | chr4_1:61745009-61745028 | None:intergenic | 25.0% |
! | ACAACTTAAAGTGAAACTTT+GGG | - | chr4_1:61745082-61745101 | None:intergenic | 25.0% |
! | CTGCAATGTACAATATAAAT+AGG | - | chr4_1:61745128-61745147 | None:intergenic | 25.0% |
! | TGTCATTAAATACTCATAAC+GGG | - | chr4_1:61745754-61745773 | None:intergenic | 25.0% |
! | CTGTCATTAAATACTCATAA+CGG | - | chr4_1:61745755-61745774 | None:intergenic | 25.0% |
! | TCAAAAGAAAACAAATGCAA+GGG | - | chr4_1:61745811-61745830 | None:intergenic | 25.0% |
! | TTCAAAAGAAAACAAATGCA+AGG | - | chr4_1:61745812-61745831 | None:intergenic | 25.0% |
! | TGCTTTTGCCCAAAAAAAAA+TGG | + | chr4_1:61738052-61738071 | Msa0562120:five_prime_UTR | 30.0% |
AATTAGGGTTTATGGAGAAA+GGG | - | chr4_1:61738160-61738179 | None:intergenic | 30.0% | |
AAATTAGGGTTTATGGAGAA+AGG | - | chr4_1:61738161-61738180 | None:intergenic | 30.0% | |
AGATGGAAAATTAGGGTTTA+TGG | - | chr4_1:61738168-61738187 | None:intergenic | 30.0% | |
! | AAATGTGGGTTATCTTCATT+TGG | + | chr4_1:61738690-61738709 | Msa0562120:intron | 30.0% |
! | AAAATTACTTGGGTGTCTTT+TGG | + | chr4_1:61738769-61738788 | Msa0562120:intron | 30.0% |
! | TGGTTTTTGTGTGTAAATAG+TGG | + | chr4_1:61738789-61738808 | Msa0562120:intron | 30.0% |
! | GGTTTTTGTGTGTAAATAGT+GGG | + | chr4_1:61738790-61738809 | Msa0562120:intron | 30.0% |
AATTTGTAGTCCCTATTTGA+AGG | + | chr4_1:61738976-61738995 | Msa0562120:intron | 30.0% | |
TAACACAGAACCTTCAAATA+GGG | - | chr4_1:61738989-61739008 | None:intergenic | 30.0% | |
TTAACACAGAACCTTCAAAT+AGG | - | chr4_1:61738990-61739009 | None:intergenic | 30.0% | |
!!! | TTGTGTGTGTTTTTGAAATG+TGG | + | chr4_1:61739057-61739076 | Msa0562120:intron | 30.0% |
!!! | TGTGTGTGTTTTTGAAATGT+GGG | + | chr4_1:61739058-61739077 | Msa0562120:intron | 30.0% |
! | AAATAAACACGTAGAGTGTT+TGG | + | chr4_1:61739114-61739133 | Msa0562120:intron | 30.0% |
TATTGATAGAGAGATGAAGT+TGG | + | chr4_1:61739223-61739242 | Msa0562120:CDS | 30.0% | |
TTTAGTACAGTGTTATCCAA+TGG | + | chr4_1:61739536-61739555 | Msa0562120:intron | 30.0% | |
TACAAAAGCAGTATTGTCTA+TGG | - | chr4_1:61739698-61739717 | None:intergenic | 30.0% | |
AATGCACTGCATTAAAATGT+AGG | - | chr4_1:61739806-61739825 | None:intergenic | 30.0% | |
GGTTTCAAATATTCCGTATT+GGG | + | chr4_1:61739967-61739986 | Msa0562120:CDS | 30.0% | |
! | ATTGTGGATCTCATTGATTA+TGG | + | chr4_1:61740160-61740179 | Msa0562120:CDS | 30.0% |
! | ATAAATGTGAAGCATTTCGT+CGG | + | chr4_1:61740239-61740258 | Msa0562120:CDS | 30.0% |
TATGTCTTTCCGAACATTAA+AGG | + | chr4_1:61740349-61740368 | Msa0562120:CDS | 30.0% | |
AAGGATTAAAAAGAAAGGCT+AGG | + | chr4_1:61740368-61740387 | Msa0562120:CDS | 30.0% | |
TTGGAGACCATTTGTAATAA+TGG | - | chr4_1:61740620-61740639 | None:intergenic | 30.0% | |
! | ATTGGTAGCAATATTACAAG+GGG | - | chr4_1:61740956-61740975 | None:intergenic | 30.0% |
! | GATTGGTAGCAATATTACAA+GGG | - | chr4_1:61740957-61740976 | None:intergenic | 30.0% |
! | TGATTGGTAGCAATATTACA+AGG | - | chr4_1:61740958-61740977 | None:intergenic | 30.0% |
CAGCACTATAAAGAATTGAA+TGG | - | chr4_1:61741035-61741054 | None:intergenic | 30.0% | |
!! | TTGTGGACTGGTAAAAAATT+TGG | + | chr4_1:61741491-61741510 | Msa0562120:CDS | 30.0% |
AAGTACAGATTCAGTTACAT+TGG | - | chr4_1:61741538-61741557 | None:intergenic | 30.0% | |
AAAGACAAAGTCTTCCTAAA+TGG | + | chr4_1:61741621-61741640 | Msa0562120:CDS | 30.0% | |
AAGACAAAGTCTTCCTAAAT+GGG | + | chr4_1:61741622-61741641 | Msa0562120:CDS | 30.0% | |
CTTACTTTACATATGAGTCA+TGG | + | chr4_1:61741775-61741794 | Msa0562120:intron | 30.0% | |
! | TATGCAAGTTGAAATGCTTT+AGG | - | chr4_1:61741863-61741882 | None:intergenic | 30.0% |
GTATTAAGTATCTGGAAACT+TGG | + | chr4_1:61741919-61741938 | Msa0562120:intron | 30.0% | |
AATTGAAAACATAACGTAGG+AGG | - | chr4_1:61742374-61742393 | None:intergenic | 30.0% | |
!!! | TGTTTCCCTATTTTTTTTCC+TGG | + | chr4_1:61742426-61742445 | Msa0562120:intron | 30.0% |
AAATAGAAATGGTTAACGCT+AGG | - | chr4_1:61742550-61742569 | None:intergenic | 30.0% | |
AGCGTTAACCATTTCTATTT+AGG | + | chr4_1:61742550-61742569 | Msa0562120:intron | 30.0% | |
GTTAACCATTTCTATTTAGG+TGG | + | chr4_1:61742553-61742572 | Msa0562120:intron | 30.0% | |
GATTTCCACCTAAATAGAAA+TGG | - | chr4_1:61742561-61742580 | None:intergenic | 30.0% | |
AGTAATCTGCTCAAGATTAA+AGG | + | chr4_1:61742656-61742675 | Msa0562120:CDS | 30.0% | |
CAAGATTAAAGGATCTAAGT+CGG | + | chr4_1:61742667-61742686 | Msa0562120:CDS | 30.0% | |
!! | AAGCATCGACTCTTATATTT+GGG | - | chr4_1:61742967-61742986 | None:intergenic | 30.0% |
!! | AAAGCATCGACTCTTATATT+TGG | - | chr4_1:61742968-61742987 | None:intergenic | 30.0% |
CCATTATAGAATTCAGACTT+CGG | - | chr4_1:61743088-61743107 | None:intergenic | 30.0% | |
CGAAGTCTGAATTCTATAAT+GGG | + | chr4_1:61743086-61743105 | Msa0562120:CDS | 30.0% | |
CAAAGCTGAAATTGAGAATA+AGG | + | chr4_1:61743225-61743244 | Msa0562120:CDS | 30.0% | |
CCAAAATTAACAATGTCTTC+AGG | - | chr4_1:61743274-61743293 | None:intergenic | 30.0% | |
! | CCTGAAGACATTGTTAATTT+TGG | + | chr4_1:61743271-61743290 | Msa0562120:CDS | 30.0% |
GGAAAGATACAGAGTAAAAT+TGG | + | chr4_1:61743292-61743311 | Msa0562120:CDS | 30.0% | |
!! | TGTGCTTTAGCTTTATACTA+TGG | - | chr4_1:61743417-61743436 | None:intergenic | 30.0% |
!!! | GTCTTATGGACGAATTTTTT+AGG | + | chr4_1:61743560-61743579 | Msa0562120:intron | 30.0% |
! | ACTGAACTTTAAGAAGTTAG+CGG | - | chr4_1:61744165-61744184 | None:intergenic | 30.0% |
!! | GTTTACTTTAAAACCCAGTT+TGG | + | chr4_1:61744188-61744207 | Msa0562120:intron | 30.0% |
ATGCTAGTACTATTAAGCAT+TGG | - | chr4_1:61744237-61744256 | None:intergenic | 30.0% | |
CATTCATTGAATTTGGATCT+AGG | - | chr4_1:61744571-61744590 | None:intergenic | 30.0% | |
CTAGATCCAAATTCAATGAA+TGG | + | chr4_1:61744569-61744588 | Msa0562120:intron | 30.0% | |
TAACATATCAGAGATTGAAG+TGG | + | chr4_1:61744609-61744628 | Msa0562120:intron | 30.0% | |
! | GATCTTTAAAAAAACACAGG+AGG | - | chr4_1:61744649-61744668 | None:intergenic | 30.0% |
TGCAAGATTGAAAACTGAAA+CGG | + | chr4_1:61744726-61744745 | Msa0562120:intron | 30.0% | |
GACCTGCATAACATAAAATT+AGG | - | chr4_1:61744918-61744937 | None:intergenic | 30.0% | |
GACAACTTAAAGTGAAACTT+TGG | - | chr4_1:61745083-61745102 | None:intergenic | 30.0% | |
GTGCGATCACTAATATTTAT+GGG | + | chr4_1:61745206-61745225 | Msa0562120:CDS | 30.0% | |
TTAAAAGGAATGCTCATATC+CGG | + | chr4_1:61745843-61745862 | Msa0562120:three_prime_UTR | 30.0% | |
!!! | TTCCAACCATTTATTTTGGA+GGG | - | chr4_1:61746013-61746032 | None:intergenic | 30.0% |
!!! | TTTCCAACCATTTATTTTGG+AGG | - | chr4_1:61746014-61746033 | None:intergenic | 30.0% |
TTACAAAAAATTTCCCACCG+TGG | + | chr4_1:61738024-61738043 | Msa0562120:five_prime_UTR | 35.0% | |
TTTACTCCATTAGTGTACTG+TGG | - | chr4_1:61738126-61738145 | None:intergenic | 35.0% | |
TGTACGGAGATGGAAAATTA+GGG | - | chr4_1:61738175-61738194 | None:intergenic | 35.0% | |
TTGTACGGAGATGGAAAATT+AGG | - | chr4_1:61738176-61738195 | None:intergenic | 35.0% | |
TAACAGCATCTACACAGAAA+TGG | + | chr4_1:61738230-61738249 | Msa0562120:CDS | 35.0% | |
! | GTATTGATCGAAGAACATGA+CGG | - | chr4_1:61738346-61738365 | None:intergenic | 35.0% |
GTCATGTTCTTCGATCAATA+CGG | + | chr4_1:61738345-61738364 | Msa0562120:CDS | 35.0% | |
TCATCAACACCTTTCTTAGA+AGG | - | chr4_1:61738474-61738493 | None:intergenic | 35.0% | |
AATATGCCACGGTTAAGTTT+GGG | + | chr4_1:61738502-61738521 | Msa0562120:CDS | 35.0% | |
!! | GAAAGTTGATGTTCAACTTC+AGG | + | chr4_1:61738635-61738654 | Msa0562120:CDS | 35.0% |
! | TGTGTGTAAATAGTGGGAAA+AGG | + | chr4_1:61738796-61738815 | Msa0562120:intron | 35.0% |
! | GTAAATAGTGGGAAAAGGTT+CGG | + | chr4_1:61738801-61738820 | Msa0562120:intron | 35.0% |
TGTGTAAATTGTAGTAGAGC+TGG | + | chr4_1:61738837-61738856 | Msa0562120:intron | 35.0% | |
AGAGCTGGAAATAAACACAT+AGG | + | chr4_1:61738852-61738871 | Msa0562120:intron | 35.0% | |
TGCAAGTGTGTGTTAATTAC+AGG | + | chr4_1:61738909-61738928 | Msa0562120:intron | 35.0% | |
GTTCTGTGTGTGTTAATTTC+AGG | + | chr4_1:61739145-61739164 | Msa0562120:intron | 35.0% | |
TATATGTTCCGAAGAAGGTT+CGG | + | chr4_1:61739168-61739187 | Msa0562120:CDS | 35.0% | |
! | GGAGTGATAAGTTTAAGACT+GGG | + | chr4_1:61739189-61739208 | Msa0562120:CDS | 35.0% |
GTGACAAGGGAAATAACTAT+TGG | + | chr4_1:61739248-61739267 | Msa0562120:CDS | 35.0% | |
CACTGTACTAAAGCAAAGTA+GGG | - | chr4_1:61739528-61739547 | None:intergenic | 35.0% | |
ACACTGTACTAAAGCAAAGT+AGG | - | chr4_1:61739529-61739548 | None:intergenic | 35.0% | |
GTGTTATCCAATGGAAGTTA+TGG | + | chr4_1:61739545-61739564 | Msa0562120:CDS | 35.0% | |
ACTATATGGCACATTTATGG+TGG | - | chr4_1:61739636-61739655 | None:intergenic | 35.0% | |
ACCATAAATGTGCCATATAG+TGG | + | chr4_1:61739635-61739654 | Msa0562120:intron | 35.0% | |
TGGCCAAAATTGCAGAAATT+TGG | + | chr4_1:61739655-61739674 | Msa0562120:intron | 35.0% | |
GGCCAAAATTGCAGAAATTT+GGG | + | chr4_1:61739656-61739675 | Msa0562120:intron | 35.0% | |
! | GACCCAAATTTCTGCAATTT+TGG | - | chr4_1:61739661-61739680 | None:intergenic | 35.0% |
! | AAGAGCAAGTATTTCTGAAG+AGG | + | chr4_1:61739939-61739958 | Msa0562120:CDS | 35.0% |
GGGTTTCAAATATTCCGTAT+TGG | + | chr4_1:61739966-61739985 | Msa0562120:CDS | 35.0% | |
AGTCACAGATGAAGAGAAAT+AGG | + | chr4_1:61740002-61740021 | Msa0562120:CDS | 35.0% | |
ACAGATGAAGAGAAATAGGA+TGG | + | chr4_1:61740006-61740025 | Msa0562120:CDS | 35.0% | |
TAGGATGGTTGTTAAATTGG+TGG | + | chr4_1:61740021-61740040 | Msa0562120:CDS | 35.0% | |
ATGGTTGTTAAATTGGTGGA+AGG | + | chr4_1:61740025-61740044 | Msa0562120:CDS | 35.0% | |
GCAAAAAACAGTATCCATAC+AGG | - | chr4_1:61740115-61740134 | None:intergenic | 35.0% | |
!!! | TGGATACTGTTTTTTGCTCT+TGG | + | chr4_1:61740118-61740137 | Msa0562120:CDS | 35.0% |
CACTTCAGATAAAGAGATTG+TGG | + | chr4_1:61740144-61740163 | Msa0562120:CDS | 35.0% | |
ATTGATTATGGAGAGTCAGA+TGG | + | chr4_1:61740172-61740191 | Msa0562120:CDS | 35.0% | |
! | TAAATGTGAAGCATTTCGTC+GGG | + | chr4_1:61740240-61740259 | Msa0562120:CDS | 35.0% |
TTCTTAGAGGAACGTGTAAA+AGG | + | chr4_1:61740280-61740299 | Msa0562120:CDS | 35.0% | |
! | CATCCCTGTTATCAGTTTTT+CGG | - | chr4_1:61740441-61740460 | None:intergenic | 35.0% |
! | GGGATGATTTTCGAAATAAG+AGG | + | chr4_1:61740455-61740474 | Msa0562120:CDS | 35.0% |
GACGCTTCCATTATTACAAA+TGG | + | chr4_1:61740610-61740629 | Msa0562120:CDS | 35.0% | |
ATCCTTTCAAAAGGATGGAA+AGG | + | chr4_1:61740668-61740687 | Msa0562120:CDS | 35.0% | |
! | ATCCTTTCCATCCTTTTGAA+AGG | - | chr4_1:61740673-61740692 | None:intergenic | 35.0% |
AAAAGGATGGAAAGGATATC+TGG | + | chr4_1:61740676-61740695 | Msa0562120:CDS | 35.0% | |
AACCAATCCATTACAAACCA+TGG | + | chr4_1:61740720-61740739 | Msa0562120:CDS | 35.0% | |
! | AATTCAGCCATGGTTTGTAA+TGG | - | chr4_1:61740730-61740749 | None:intergenic | 35.0% |
TGTTCTTCTTAATTCAGCCA+TGG | - | chr4_1:61740740-61740759 | None:intergenic | 35.0% | |
TGGCTGAATTAAGAAGAACA+AGG | + | chr4_1:61740740-61740759 | Msa0562120:CDS | 35.0% | |
!! | AACTGTGAGTTTTAATGACC+AGG | - | chr4_1:61741009-61741028 | None:intergenic | 35.0% |
! | GACTAGATGCTGAGTTTTTA+TGG | + | chr4_1:61741063-61741082 | Msa0562120:intron | 35.0% |
! | TAGATGCTGAGTTTTTATGG+TGG | + | chr4_1:61741066-61741085 | Msa0562120:intron | 35.0% |
TCTGTAATGTGCTTTCATTG+AGG | + | chr4_1:61741100-61741119 | Msa0562120:intron | 35.0% | |
CTGTAATGTGCTTTCATTGA+GGG | + | chr4_1:61741101-61741120 | Msa0562120:intron | 35.0% | |
TGTAATGTGCTTTCATTGAG+GGG | + | chr4_1:61741102-61741121 | Msa0562120:intron | 35.0% | |
GATCAATCCATGTAAAGGTT+GGG | - | chr4_1:61741250-61741269 | None:intergenic | 35.0% | |
AGATCAATCCATGTAAAGGT+TGG | - | chr4_1:61741251-61741270 | None:intergenic | 35.0% | |
GACTAGATCAATCCATGTAA+AGG | - | chr4_1:61741255-61741274 | None:intergenic | 35.0% | |
GTAAAAAATTTGGCTGTCAC+AGG | + | chr4_1:61741501-61741520 | Msa0562120:CDS | 35.0% | |
!!! | TTTGTCTTTTTTCCCCAGAA+CGG | - | chr4_1:61741610-61741629 | None:intergenic | 35.0% |
AGACAAAGTCTTCCTAAATG+GGG | + | chr4_1:61741623-61741642 | Msa0562120:CDS | 35.0% | |
! | ACAACCTTTTTCCACCATAT+GGG | - | chr4_1:61741807-61741826 | None:intergenic | 35.0% |
! | AACAACCTTTTTCCACCATA+TGG | - | chr4_1:61741808-61741827 | None:intergenic | 35.0% |
AGGTAGTGTATATAGAGACA+TGG | - | chr4_1:61742053-61742072 | None:intergenic | 35.0% | |
! | TAAATGACAGTGTTTTGCAG+AGG | - | chr4_1:61742073-61742092 | None:intergenic | 35.0% |
! | GCTTGCCATTATTTCAGTTT+TGG | + | chr4_1:61742172-61742191 | Msa0562120:intron | 35.0% |
AGATTACTAACAACCAAGAG+TGG | - | chr4_1:61742644-61742663 | None:intergenic | 35.0% | |
TAAATCTTTCCAGTCCCTAT+TGG | + | chr4_1:61742694-61742713 | Msa0562120:CDS | 35.0% | |
AATCACGCCATTATCCAATA+GGG | - | chr4_1:61742711-61742730 | None:intergenic | 35.0% | |
TCAGTATTTGTTTGGCAAAG+AGG | + | chr4_1:61742781-61742800 | Msa0562120:CDS | 35.0% | |
CAGTATTTGTTTGGCAAAGA+GGG | + | chr4_1:61742782-61742801 | Msa0562120:CDS | 35.0% | |
TTCACAATGTGTGTACTTCA+CGG | - | chr4_1:61742816-61742835 | None:intergenic | 35.0% | |
GTCTTTGTGGATAAAACAGT+TGG | - | chr4_1:61742997-61743016 | None:intergenic | 35.0% | |
ACAATGACATCTGATTGTCT+CGG | + | chr4_1:61743028-61743047 | Msa0562120:CDS | 35.0% | |
CCGAAGTCTGAATTCTATAA+TGG | + | chr4_1:61743085-61743104 | Msa0562120:CDS | 35.0% | |
TGTTCAGATCTGAGCATATA+AGG | + | chr4_1:61743197-61743216 | Msa0562120:CDS | 35.0% | |
! | TGCAAATTTGCTCCAACAAA+TGG | - | chr4_1:61743349-61743368 | None:intergenic | 35.0% |
! | CTTTTGAACATAACCCCTTT+CGG | - | chr4_1:61743440-61743459 | None:intergenic | 35.0% |
! | TACTTGAATGCAAGTTGAGA+TGG | + | chr4_1:61743613-61743632 | Msa0562120:intron | 35.0% |
GTTTGTTCATAATCTGCACA+TGG | + | chr4_1:61743652-61743671 | Msa0562120:intron | 35.0% | |
AGTGGTCAAATACAACTTAG+AGG | - | chr4_1:61743720-61743739 | None:intergenic | 35.0% | |
AGAACTTATCTCCAAGAACT+GGG | - | chr4_1:61743781-61743800 | None:intergenic | 35.0% | |
AATTTCCCCTTCACAAAACA+AGG | + | chr4_1:61743851-61743870 | Msa0562120:CDS | 35.0% | |
!!! | ACAATGCCTTGTTTTGTGAA+GGG | - | chr4_1:61743860-61743879 | None:intergenic | 35.0% |
!!! | AACAATGCCTTGTTTTGTGA+AGG | - | chr4_1:61743861-61743880 | None:intergenic | 35.0% |
!! | TACTATTAAGCATTGGTCAC+CGG | - | chr4_1:61744230-61744249 | None:intergenic | 35.0% |
TCAATAACGTGTTCATTGCT+AGG | + | chr4_1:61744284-61744303 | Msa0562120:intron | 35.0% | |
! | GAAACGGTAATTGAGCATTT+TGG | + | chr4_1:61744742-61744761 | Msa0562120:intron | 35.0% |
ACATAAAATTAGGCCTGTCA+TGG | - | chr4_1:61744908-61744927 | None:intergenic | 35.0% | |
! | GGCCTAATTTTATGTTATGC+AGG | + | chr4_1:61744913-61744932 | Msa0562120:intron | 35.0% |
TATATTGTACATTGCAGAGC+TGG | + | chr4_1:61745131-61745150 | Msa0562120:intron | 35.0% | |
GGTGCGATCACTAATATTTA+TGG | + | chr4_1:61745205-61745224 | Msa0562120:CDS | 35.0% | |
! | CCTGAATTTGACTTTGTCTT+CGG | - | chr4_1:61745264-61745283 | None:intergenic | 35.0% |
AAAGTCAAATTCAGGAACAC+CGG | + | chr4_1:61745269-61745288 | Msa0562120:CDS | 35.0% | |
! | AGGTATCAAGTTTGGTGAAA+TGG | + | chr4_1:61745343-61745362 | Msa0562120:CDS | 35.0% |
GACAATAACTTTGCTCCATA+TGG | - | chr4_1:61745575-61745594 | None:intergenic | 35.0% | |
ACATGTCAAAAGTCTAGTCT+GGG | - | chr4_1:61745691-61745710 | None:intergenic | 35.0% | |
GACATGTGTACATATCAGTT+TGG | + | chr4_1:61745704-61745723 | Msa0562120:three_prime_UTR | 35.0% | |
! | GTACATATCAGTTTGGTTCA+TGG | + | chr4_1:61745711-61745730 | Msa0562120:three_prime_UTR | 35.0% |
GCATTCAAGAAAATCAGGTT+AGG | - | chr4_1:61745789-61745808 | None:intergenic | 35.0% | |
!!! | CCATCATTCGTTAGTTTTCT+GGG | - | chr4_1:61745879-61745898 | None:intergenic | 35.0% |
CCAGAAAACTAACGAATGAT+GGG | + | chr4_1:61745877-61745896 | Msa0562120:three_prime_UTR | 35.0% | |
AAACCAGTATGCAAAATTCC+TGG | - | chr4_1:61745971-61745990 | None:intergenic | 35.0% | |
ACTCTACCCTCCAAAATAAA+TGG | + | chr4_1:61746004-61746023 | Msa0562120:three_prime_UTR | 35.0% | |
TACCCTCCAAAATAAATGGT+TGG | + | chr4_1:61746008-61746027 | Msa0562120:three_prime_UTR | 35.0% | |
! | AGTGTGACTGTGAGTTTTTG+CGG | - | chr4_1:61738103-61738122 | None:intergenic | 40.0% |
! | GGTTTATGGAGAAAGGGTTT+TGG | - | chr4_1:61738154-61738173 | None:intergenic | 40.0% |
TTTCCATCTCCGTACAACAA+TGG | + | chr4_1:61738179-61738198 | Msa0562120:exon | 40.0% | |
TGTGATCCTCCATTGTTGTA+CGG | - | chr4_1:61738191-61738210 | None:intergenic | 40.0% | |
ACAACAATGGAGGATCACAT+AGG | + | chr4_1:61738192-61738211 | Msa0562120:exon | 40.0% | |
GATCTTCTTCTTCATCGTTG+AGG | - | chr4_1:61738263-61738282 | None:intergenic | 40.0% | |
TTCTTAGAAGGATCAAACCC+TGG | - | chr4_1:61738462-61738481 | None:intergenic | 40.0% | |
! | GGGTTTGATCCTTCTAAGAA+AGG | + | chr4_1:61738462-61738481 | Msa0562120:CDS | 40.0% |
TGAACCTTACCAATATGCCA+CGG | + | chr4_1:61738491-61738510 | Msa0562120:CDS | 40.0% | |
TTAACCGTGGCATATTGGTA+AGG | - | chr4_1:61738498-61738517 | None:intergenic | 40.0% | |
CAAACTTAACCGTGGCATAT+TGG | - | chr4_1:61738503-61738522 | None:intergenic | 40.0% | |
CAATATGCCACGGTTAAGTT+TGG | + | chr4_1:61738501-61738520 | Msa0562120:CDS | 40.0% | |
!!! | CTATGTTTTGGTGTGGTGAA+GGG | + | chr4_1:61738544-61738563 | Msa0562120:CDS | 40.0% |
TCAGGTATATGTTCCGAAGA+AGG | + | chr4_1:61739163-61739182 | Msa0562120:intron | 40.0% | |
TTATCACTCCGAACCTTCTT+CGG | - | chr4_1:61739179-61739198 | None:intergenic | 40.0% | |
! | CGGAGTGATAAGTTTAAGAC+TGG | + | chr4_1:61739188-61739207 | Msa0562120:CDS | 40.0% |
AGATGAAGTTGGATGTGACA+AGG | + | chr4_1:61739234-61739253 | Msa0562120:CDS | 40.0% | |
GATGAAGTTGGATGTGACAA+GGG | + | chr4_1:61739235-61739254 | Msa0562120:CDS | 40.0% | |
TATTGGTAGACTGCCTGTTA+TGG | + | chr4_1:61739265-61739284 | Msa0562120:CDS | 40.0% | |
AGATCAGACTTGACCATAAC+AGG | - | chr4_1:61739281-61739300 | None:intergenic | 40.0% | |
TGGATGAGTGAAGCTGAAAA+AGG | + | chr4_1:61739305-61739324 | Msa0562120:CDS | 40.0% | |
GCCACTATATGGCACATTTA+TGG | - | chr4_1:61739639-61739658 | None:intergenic | 40.0% | |
!! | CTGCAATTTTGGCCACTATA+TGG | - | chr4_1:61739650-61739669 | None:intergenic | 40.0% |
GTATTGTCTATGGCATACTG+TGG | - | chr4_1:61739688-61739707 | None:intergenic | 40.0% | |
! | AAGTATTTCTGAAGAGGCTC+TGG | + | chr4_1:61739945-61739964 | Msa0562120:CDS | 40.0% |
! | AGTATTTCTGAAGAGGCTCT+GGG | + | chr4_1:61739946-61739965 | Msa0562120:CDS | 40.0% |
TTGAAAGCAACAGCCCAATA+CGG | - | chr4_1:61739983-61740002 | None:intergenic | 40.0% | |
TCCACAGAGGGAATTACAAA+CGG | + | chr4_1:61740049-61740068 | Msa0562120:CDS | 40.0% | |
TGTCTGTTGAGATACCTGTA+TGG | + | chr4_1:61740098-61740117 | Msa0562120:CDS | 40.0% | |
! | AAATGTGAAGCATTTCGTCG+GGG | + | chr4_1:61740241-61740260 | Msa0562120:CDS | 40.0% |
! | GAACGCTCTTCTTTTCTTAG+AGG | + | chr4_1:61740267-61740286 | Msa0562120:CDS | 40.0% |
GTTCTTCTACTAGCGTATAC+TGG | + | chr4_1:61740412-61740431 | Msa0562120:CDS | 40.0% | |
TCGAAATAAGAGGCTTGAGT+TGG | + | chr4_1:61740465-61740484 | Msa0562120:CDS | 40.0% | |
GAACATCTCGATCTCCATAA+AGG | - | chr4_1:61740570-61740589 | None:intergenic | 40.0% | |
CATGGACACATCCTTTCAAA+AGG | + | chr4_1:61740659-61740678 | Msa0562120:CDS | 40.0% | |
GACACATCCTTTCAAAAGGA+TGG | + | chr4_1:61740663-61740682 | Msa0562120:CDS | 40.0% | |
!! | AGCCATGGTTTGTAATGGAT+TGG | - | chr4_1:61740725-61740744 | None:intergenic | 40.0% |
ACAAGTTCAGTACACAGGAA+AGG | + | chr4_1:61740765-61740784 | Msa0562120:CDS | 40.0% | |
TAACTTTCATTCGGTCAGCT+AGG | - | chr4_1:61740872-61740891 | None:intergenic | 40.0% | |
TCAACTTCCCAACCTTTACA+TGG | + | chr4_1:61741240-61741259 | Msa0562120:intron | 40.0% | |
! | ACATGGATTGATCTAGTCTC+TGG | + | chr4_1:61741257-61741276 | Msa0562120:intron | 40.0% |
TAATGGAAGCTTATGGTTGC+AGG | + | chr4_1:61741415-61741434 | Msa0562120:intron | 40.0% | |
! | TCCACAATTTTCACCATCTG+GGG | - | chr4_1:61741478-61741497 | None:intergenic | 40.0% |
! | GTCCACAATTTTCACCATCT+GGG | - | chr4_1:61741479-61741498 | None:intergenic | 40.0% |
! | AGTCCACAATTTTCACCATC+TGG | - | chr4_1:61741480-61741499 | None:intergenic | 40.0% |
AGATGGTGAAAATTGTGGAC+TGG | + | chr4_1:61741479-61741498 | Msa0562120:CDS | 40.0% | |
TTCCTCAGCTGTTTGATTGT+GGG | + | chr4_1:61741556-61741575 | Msa0562120:CDS | 40.0% | |
TGATGATACTATGACCGTTC+TGG | + | chr4_1:61741593-61741612 | Msa0562120:CDS | 40.0% | |
GATGATACTATGACCGTTCT+GGG | + | chr4_1:61741594-61741613 | Msa0562120:CDS | 40.0% | |
ATGATACTATGACCGTTCTG+GGG | + | chr4_1:61741595-61741614 | Msa0562120:CDS | 40.0% | |
! | TAGCTCTGCTACAAATGATG+TGG | - | chr4_1:61741673-61741692 | None:intergenic | 40.0% |
CAGAGCTACGAAATAGAAGA+CGG | + | chr4_1:61741685-61741704 | Msa0562120:CDS | 40.0% | |
GATTAAAAGCGAACCTGATG+AGG | - | chr4_1:61741723-61741742 | None:intergenic | 40.0% | |
! | AGAACCCATATGGTGGAAAA+AGG | + | chr4_1:61741800-61741819 | Msa0562120:intron | 40.0% |
TCAATCTTTGACAGAGGAGA+GGG | - | chr4_1:61742101-61742120 | None:intergenic | 40.0% | |
ATCAATCTTTGACAGAGGAG+AGG | - | chr4_1:61742102-61742121 | None:intergenic | 40.0% | |
TATTGGAAGCTTCTCACAAG+GGG | - | chr4_1:61742331-61742350 | None:intergenic | 40.0% | |
GTATTGGAAGCTTCTCACAA+GGG | - | chr4_1:61742332-61742351 | None:intergenic | 40.0% | |
! | AGTATTGGAAGCTTCTCACA+AGG | - | chr4_1:61742333-61742352 | None:intergenic | 40.0% |
GCATATTATCTGATGCAGGA+AGG | + | chr4_1:61742609-61742628 | Msa0562120:CDS | 40.0% | |
TACTAACAACCAAGAGTGGA+CGG | - | chr4_1:61742640-61742659 | None:intergenic | 40.0% | |
TTCCAGTCCCTATTGGATAA+TGG | + | chr4_1:61742701-61742720 | Msa0562120:CDS | 40.0% | |
CAATCACGCCATTATCCAAT+AGG | - | chr4_1:61742712-61742731 | None:intergenic | 40.0% | |
TTGAAGTCCTCTTCTTCTTC+AGG | - | chr4_1:61742746-61742765 | None:intergenic | 40.0% | |
! | TGGGGTGTTCAGTATTTGTT+TGG | + | chr4_1:61742773-61742792 | Msa0562120:CDS | 40.0% |
! | GCATGGTCATGATTTGCAAA+TGG | - | chr4_1:61742881-61742900 | None:intergenic | 40.0% |
TTGCAAATCATGACCATGCT+AGG | + | chr4_1:61742882-61742901 | Msa0562120:CDS | 40.0% | |
!! | GTTTGTTGTAGCAAAGCCAA+TGG | - | chr4_1:61742945-61742964 | None:intergenic | 40.0% |
TTACTCTGACCTAGATATCC+AGG | - | chr4_1:61743058-61743077 | None:intergenic | 40.0% | |
! | TAATGGGCAGAATGCAATTG+TGG | + | chr4_1:61743102-61743121 | Msa0562120:CDS | 40.0% |
CAGAGTGGCGATATTATCAT+CGG | + | chr4_1:61743367-61743386 | Msa0562120:CDS | 40.0% | |
AGAGTGGCGATATTATCATC+GGG | + | chr4_1:61743368-61743387 | Msa0562120:CDS | 40.0% | |
CTTTATACTATGGTCCATCC+CGG | - | chr4_1:61743407-61743426 | None:intergenic | 40.0% | |
TAAAGCTAAAGCACACCGAA+AGG | + | chr4_1:61743422-61743441 | Msa0562120:CDS | 40.0% | |
AAAGCTAAAGCACACCGAAA+GGG | + | chr4_1:61743423-61743442 | Msa0562120:CDS | 40.0% | |
CGAAAGGGGTTATGTTCAAA+AGG | + | chr4_1:61743438-61743457 | Msa0562120:CDS | 40.0% | |
!! | TGCTGTTGTTTCGTTAAGAC+AGG | + | chr4_1:61743495-61743514 | Msa0562120:CDS | 40.0% |
GTTTCGTTAAGACAGGTAAC+TGG | + | chr4_1:61743502-61743521 | Msa0562120:intron | 40.0% | |
! | TGATGATGCATGCTGTCTTA+TGG | + | chr4_1:61743546-61743565 | Msa0562120:intron | 40.0% |
GAGAACTTATCTCCAAGAAC+TGG | - | chr4_1:61743782-61743801 | None:intergenic | 40.0% | |
GATAAGTTCTCCAGTATGCA+TGG | + | chr4_1:61743791-61743810 | Msa0562120:CDS | 40.0% | |
!!! | TTTGGGTTTTCTGGAATCTC+AGG | + | chr4_1:61743826-61743845 | Msa0562120:CDS | 40.0% |
!!! | CAATGCCTTGTTTTGTGAAG+GGG | - | chr4_1:61743859-61743878 | None:intergenic | 40.0% |
AGATTACCTATGAAGCTGGT+CGG | - | chr4_1:61744029-61744048 | None:intergenic | 40.0% | |
TGGAAGATTACCTATGAAGC+TGG | - | chr4_1:61744033-61744052 | None:intergenic | 40.0% | |
AAGTTAGCGGTTAGTGAAGT+TGG | - | chr4_1:61744152-61744171 | None:intergenic | 40.0% | |
TTCAAGCTCATTCCCAAACT+GGG | - | chr4_1:61744204-61744223 | None:intergenic | 40.0% | |
TTTCAAGCTCATTCCCAAAC+TGG | - | chr4_1:61744205-61744224 | None:intergenic | 40.0% | |
TGGGAATGAGCTTGAAATAC+CGG | + | chr4_1:61744208-61744227 | Msa0562120:intron | 40.0% | |
TCACTGCTTCTTTGTTGCAT+TGG | - | chr4_1:61744344-61744363 | None:intergenic | 40.0% | |
CAGTGTACTACACTTCACAA+TGG | + | chr4_1:61744767-61744786 | Msa0562120:intron | 40.0% | |
GCAATTATGCAGTCAATCGT+TGG | - | chr4_1:61744810-61744829 | None:intergenic | 40.0% | |
ACTGCATAATTGCAGCAGTT+TGG | + | chr4_1:61744817-61744836 | Msa0562120:intron | 40.0% | |
TCTCTTAACTGAACCATGAC+AGG | + | chr4_1:61744892-61744911 | Msa0562120:intron | 40.0% | |
TGCAGGTCATTTCTCTATCA+AGG | + | chr4_1:61744930-61744949 | Msa0562120:intron | 40.0% | |
AGGTCATTTCTCTATCAAGG+AGG | + | chr4_1:61744933-61744952 | Msa0562120:intron | 40.0% | |
TTGTAGATTGCATTAGCTCC+AGG | + | chr4_1:61745031-61745050 | Msa0562120:intron | 40.0% | |
! | TCCAGGCTCGCTTTAAATTT+AGG | + | chr4_1:61745048-61745067 | Msa0562120:intron | 40.0% |
! | TCCTAAATTTAAAGCGAGCC+TGG | - | chr4_1:61745052-61745071 | None:intergenic | 40.0% |
CCGAAGACAAAGTCAAATTC+AGG | + | chr4_1:61745261-61745280 | Msa0562120:CDS | 40.0% | |
!! | CGATTTGGAGGTATCAAGTT+TGG | + | chr4_1:61745335-61745354 | Msa0562120:CDS | 40.0% |
! | TATCTGAGACGAATCACTCA+GGG | - | chr4_1:61745426-61745445 | None:intergenic | 40.0% |
GATTCACAGAAACGGCAATA+CGG | - | chr4_1:61745524-61745543 | None:intergenic | 40.0% | |
TGGAGCAAAGTTATTGTCTC+AGG | + | chr4_1:61745577-61745596 | Msa0562120:CDS | 40.0% | |
CATGTCAAAAGTCTAGTCTG+GGG | - | chr4_1:61745690-61745709 | None:intergenic | 40.0% | |
CACATGTCAAAAGTCTAGTC+TGG | - | chr4_1:61745692-61745711 | None:intergenic | 40.0% | |
!! | CAAGGGCATTCAAGAAAATC+AGG | - | chr4_1:61745794-61745813 | None:intergenic | 40.0% |
!!! | ATTCGTTAGTTTTCTGGGAG+AGG | - | chr4_1:61745874-61745893 | None:intergenic | 40.0% |
CCCAGAAAACTAACGAATGA+TGG | + | chr4_1:61745876-61745895 | Msa0562120:three_prime_UTR | 40.0% | |
!!! | CCCATCATTCGTTAGTTTTC+TGG | - | chr4_1:61745880-61745899 | None:intergenic | 40.0% |
! | TTGCCAGGAATTTTGCATAC+TGG | + | chr4_1:61745965-61745984 | Msa0562120:three_prime_UTR | 40.0% |
CAAAAGCAACTTTCCACGGT+GGG | - | chr4_1:61738040-61738059 | None:intergenic | 45.0% | |
TGGGCAAAAGCAACTTTCCA+CGG | - | chr4_1:61738044-61738063 | None:intergenic | 45.0% | |
CACACTCCACAGTACACTAA+TGG | + | chr4_1:61738117-61738136 | Msa0562120:five_prime_UTR | 45.0% | |
AGTTCGTTGAGGATTTCGGA+TGG | - | chr4_1:61738285-61738304 | None:intergenic | 45.0% | |
TCCGAAATCCTCAACGAACT+CGG | + | chr4_1:61738285-61738304 | Msa0562120:CDS | 45.0% | |
CAATCCGCTTTCGATTCCTT+CGG | + | chr4_1:61738420-61738439 | Msa0562120:CDS | 45.0% | |
ATCACCGAAGGAATCGAAAG+CGG | - | chr4_1:61738427-61738446 | None:intergenic | 45.0% | |
CACATTCCCAAACTTAACCG+TGG | - | chr4_1:61738511-61738530 | None:intergenic | 45.0% | |
! | CGCTTGATCGACCTATGTTT+TGG | + | chr4_1:61738532-61738551 | Msa0562120:CDS | 45.0% |
!!! | GATCGACCTATGTTTTGGTG+TGG | + | chr4_1:61738537-61738556 | Msa0562120:CDS | 45.0% |
CCTTCACCACACCAAAACAT+AGG | - | chr4_1:61738546-61738565 | None:intergenic | 45.0% | |
!!! | CCTATGTTTTGGTGTGGTGA+AGG | + | chr4_1:61738543-61738562 | Msa0562120:CDS | 45.0% |
AGATGCTTCCTAGACATGCT+AGG | + | chr4_1:61738583-61738602 | Msa0562120:CDS | 45.0% | |
! | AATAGTGGGAAAAGGTTCGG+TGG | + | chr4_1:61738804-61738823 | Msa0562120:intron | 45.0% |
TGGTCAAGTCTGATCTTTGC+TGG | + | chr4_1:61739285-61739304 | Msa0562120:CDS | 45.0% | |
GGTGACTGTGAATTTGACCA+TGG | + | chr4_1:61739326-61739345 | Msa0562120:CDS | 45.0% | |
GACTGTGAATTTGACCATGG+AGG | + | chr4_1:61739329-61739348 | Msa0562120:CDS | 45.0% | |
ATAGGCGCCATAACTTCCAT+TGG | - | chr4_1:61739555-61739574 | None:intergenic | 45.0% | |
ATGGAAGTTATGGCGCCTAT+TGG | + | chr4_1:61739555-61739574 | Msa0562120:CDS | 45.0% | |
TTGTCTATGGCATACTGTGG+CGG | - | chr4_1:61739685-61739704 | None:intergenic | 45.0% | |
TCCGTTTGTAATTCCCTCTG+TGG | - | chr4_1:61740053-61740072 | None:intergenic | 45.0% | |
TCTATTTGCATCCATCCGTG+AGG | + | chr4_1:61740210-61740229 | Msa0562120:CDS | 45.0% | |
CACATTTATCGTCTGCCTCA+CGG | - | chr4_1:61740228-61740247 | None:intergenic | 45.0% | |
CACTCGTCAATAGATTCTGC+GGG | - | chr4_1:61740319-61740338 | None:intergenic | 45.0% | |
GCACTCGTCAATAGATTCTG+CGG | - | chr4_1:61740320-61740339 | None:intergenic | 45.0% | |
GTACCTAGCTTACATGGTGA+AGG | + | chr4_1:61740390-61740409 | Msa0562120:CDS | 45.0% | |
GAACCTTCACCATGTAAGCT+AGG | - | chr4_1:61740396-61740415 | None:intergenic | 45.0% | |
!! | CCCTGTTATCAGTTTTTCGG+CGG | - | chr4_1:61740438-61740457 | None:intergenic | 45.0% |
CCGCCGAAAAACTGATAACA+GGG | + | chr4_1:61740435-61740454 | Msa0562120:CDS | 45.0% | |
!! | AATAAGAGGCTTGAGTTGGC+TGG | + | chr4_1:61740469-61740488 | Msa0562120:CDS | 45.0% |
AAGTGCACTTTGCACATGCT+CGG | + | chr4_1:61740515-61740534 | Msa0562120:CDS | 45.0% | |
!!! | CTCCAAAGAGCGTTTTCTAC+TGG | + | chr4_1:61740634-61740653 | Msa0562120:CDS | 45.0% |
CTCCAGTAGAAAACGCTCTT+TGG | - | chr4_1:61740639-61740658 | None:intergenic | 45.0% | |
GATGGAAAGGATATCTGGTG+TGG | + | chr4_1:61740681-61740700 | Msa0562120:CDS | 45.0% | |
AGGCAACAAGTTCAGTACAC+AGG | + | chr4_1:61740760-61740779 | Msa0562120:CDS | 45.0% | |
GTTCAGTACACAGGAAAGGT+CGG | + | chr4_1:61740769-61740788 | Msa0562120:CDS | 45.0% | |
TTCAGTACACAGGAAAGGTC+GGG | + | chr4_1:61740770-61740789 | Msa0562120:CDS | 45.0% | |
ACTCAGCATCTAGTCTACAC+AGG | - | chr4_1:61741058-61741077 | None:intergenic | 45.0% | |
TGTTTCCTTTCTACCCCAGA+TGG | + | chr4_1:61741462-61741481 | Msa0562120:CDS | 45.0% | |
! | TTTCACCATCTGGGGTAGAA+AGG | - | chr4_1:61741470-61741489 | None:intergenic | 45.0% |
ACCCCAGATGGTGAAAATTG+TGG | + | chr4_1:61741474-61741493 | Msa0562120:CDS | 45.0% | |
CTTCCTCAGCTGTTTGATTG+TGG | + | chr4_1:61741555-61741574 | Msa0562120:CDS | 45.0% | |
ATCCCACAATCAAACAGCTG+AGG | - | chr4_1:61741561-61741580 | None:intergenic | 45.0% | |
TCAGCTGTTTGATTGTGGGA+TGG | + | chr4_1:61741560-61741579 | Msa0562120:CDS | 45.0% | |
AAGTCTTCCTAAATGGGGAC+TGG | + | chr4_1:61741628-61741647 | Msa0562120:CDS | 45.0% | |
AGTCTTCCTAAATGGGGACT+GGG | + | chr4_1:61741629-61741648 | Msa0562120:CDS | 45.0% | |
GAGAAATGAGTTGCCTCATC+AGG | + | chr4_1:61741707-61741726 | Msa0562120:CDS | 45.0% | |
AGTCATGGAGAGAACCCATA+TGG | + | chr4_1:61741790-61741809 | Msa0562120:intron | 45.0% | |
GTGCGCATATTATCTGATGC+AGG | + | chr4_1:61742605-61742624 | Msa0562120:CDS | 45.0% | |
AATGGCGTGATTGAGCTGAT+TGG | + | chr4_1:61742719-61742738 | Msa0562120:CDS | 45.0% | |
! | GATTGGTCCTGAAGAAGAAG+AGG | + | chr4_1:61742736-61742755 | Msa0562120:CDS | 45.0% |
AAGAGGACTTCAAGACTGCT+TGG | + | chr4_1:61742753-61742772 | Msa0562120:CDS | 45.0% | |
AGAGGACTTCAAGACTGCTT+GGG | + | chr4_1:61742754-61742773 | Msa0562120:CDS | 45.0% | |
!! | GAGAAGAATGCTTCTGGGAT+TGG | - | chr4_1:61742919-61742938 | None:intergenic | 45.0% |
!! | ATCCCAGAAGCATTCTTCTC+AGG | + | chr4_1:61742919-61742938 | Msa0562120:CDS | 45.0% |
AAGCATTCTTCTCAGGCCAT+TGG | + | chr4_1:61742926-61742945 | Msa0562120:CDS | 45.0% | |
TCTGATTGTCTCGGAAAACC+TGG | + | chr4_1:61743037-61743056 | Msa0562120:CDS | 45.0% | |
CTCGGAAAACCTGGATATCT+AGG | + | chr4_1:61743046-61743065 | Msa0562120:CDS | 45.0% | |
GTGGCTGTCAATGTACATCT+CGG | + | chr4_1:61743121-61743140 | Msa0562120:CDS | 45.0% | |
! | AGAAGCACGGTTCATAACCA+AGG | - | chr4_1:61743164-61743183 | None:intergenic | 45.0% |
TACCTCGTTGCAAAGAAGCA+CGG | - | chr4_1:61743177-61743196 | None:intergenic | 45.0% | |
!! | GTTGATAGCCTTGATGACGA+TGG | + | chr4_1:61743319-61743338 | Msa0562120:CDS | 45.0% |
ATGGAAAGCCATCGTCATCA+AGG | - | chr4_1:61743330-61743349 | None:intergenic | 45.0% | |
GACGATGGCTTTCCATTTGT+TGG | + | chr4_1:61743334-61743353 | Msa0562120:CDS | 45.0% | |
GTTGGAGCAAATTTGCAGAG+TGG | + | chr4_1:61743352-61743371 | Msa0562120:CDS | 45.0% | |
AAGCTAAAGCACACCGAAAG+GGG | + | chr4_1:61743424-61743443 | Msa0562120:CDS | 45.0% | |
TGTGCTGTCTTCGAATGATG+AGG | + | chr4_1:61743462-61743481 | Msa0562120:CDS | 45.0% | |
GTGCTGTCTTCGAATGATGA+GGG | + | chr4_1:61743463-61743482 | Msa0562120:CDS | 45.0% | |
TGCTGTCTTCGAATGATGAG+GGG | + | chr4_1:61743464-61743483 | Msa0562120:CDS | 45.0% | |
TCGTTAAGACAGGTAACTGG+TGG | + | chr4_1:61743505-61743524 | Msa0562120:intron | 45.0% | |
TCCAGTATGCATGGACAGAA+GGG | + | chr4_1:61743800-61743819 | Msa0562120:CDS | 45.0% | |
!!! | CATGGACAGAAGGGTGTTTT+GGG | + | chr4_1:61743809-61743828 | Msa0562120:CDS | 45.0% |
!!! | GAAGGGTGTTTTGGGTTTTC+TGG | + | chr4_1:61743817-61743836 | Msa0562120:CDS | 45.0% |
AACTCCTGGACAACTACTAG+AGG | + | chr4_1:61743922-61743941 | Msa0562120:CDS | 45.0% | |
ACAACTACTAGAGGCTGCTT+TGG | + | chr4_1:61743931-61743950 | Msa0562120:CDS | 45.0% | |
! | CAACTACTAGAGGCTGCTTT+GGG | + | chr4_1:61743932-61743951 | Msa0562120:CDS | 45.0% |
TCAACAGAGGAAGTGGAGAA+AGG | - | chr4_1:61743998-61744017 | None:intergenic | 45.0% | |
AATGGCTTCAACAGAGGAAG+TGG | - | chr4_1:61744005-61744024 | None:intergenic | 45.0% | |
CTGACATGCTTTCAGGCTTT+CGG | - | chr4_1:61744312-61744331 | None:intergenic | 45.0% | |
!! | ACCAGTACTGACATGCTTTC+AGG | - | chr4_1:61744319-61744338 | None:intergenic | 45.0% |
!!! | CAGAGCTGGCTTTTCAAGAT+GGG | + | chr4_1:61745145-61745164 | Msa0562120:intron | 45.0% |
!!! | AGAGCTGGCTTTTCAAGATG+GGG | + | chr4_1:61745146-61745165 | Msa0562120:intron | 45.0% |
GGGAACGAACGAGTATACAA+CGG | + | chr4_1:61745167-61745186 | Msa0562120:CDS | 45.0% | |
GGAACGAACGAGTATACAAC+GGG | + | chr4_1:61745168-61745187 | Msa0562120:CDS | 45.0% | |
TGACTTTGTCTTCGGACATG+TGG | - | chr4_1:61745256-61745275 | None:intergenic | 45.0% | |
! | GTATCTGAGACGAATCACTC+AGG | - | chr4_1:61745427-61745446 | None:intergenic | 45.0% |
TGCAAATGTGATCTTGCGAC+CGG | + | chr4_1:61745472-61745491 | Msa0562120:CDS | 45.0% | |
! | CATCGGCTGATTCACAGAAA+CGG | - | chr4_1:61745532-61745551 | None:intergenic | 45.0% |
ATCAGCCGATGACATTGTTG+TGG | + | chr4_1:61745541-61745560 | Msa0562120:CDS | 45.0% | |
ACTGGCCACAACAATGTCAT+CGG | - | chr4_1:61745549-61745568 | None:intergenic | 45.0% | |
CTTTGCTCCATATGGAACAC+TGG | - | chr4_1:61745567-61745586 | None:intergenic | 45.0% | |
GCAAAAGCAACTTTCCACGG+TGG | - | chr4_1:61738041-61738060 | None:intergenic | 50.0% | |
CCTCCATTGTTGTACGGAGA+TGG | - | chr4_1:61738185-61738204 | None:intergenic | 50.0% | |
CCATCTCCGTACAACAATGG+AGG | + | chr4_1:61738182-61738201 | Msa0562120:exon | 50.0% | |
GCCGAGTTCGTTGAGGATTT+CGG | - | chr4_1:61738289-61738308 | None:intergenic | 50.0% | |
TATCTTCGCCGAGTTCGTTG+AGG | - | chr4_1:61738296-61738315 | None:intergenic | 50.0% | |
CAACGAACTCGGCGAAGATA+TGG | + | chr4_1:61738296-61738315 | Msa0562120:CDS | 50.0% | |
CGTAACAGTGAGATCACCGA+AGG | - | chr4_1:61738439-61738458 | None:intergenic | 50.0% | |
GTGATCTCACTGTTACGCCA+GGG | + | chr4_1:61738442-61738461 | Msa0562120:CDS | 50.0% | |
CTCTGCAACCTAGCATGTCT+AGG | - | chr4_1:61738594-61738613 | None:intergenic | 50.0% | |
CTAGACATGCTAGGTTGCAG+AGG | + | chr4_1:61738592-61738611 | Msa0562120:CDS | 50.0% | |
TGATCAGGAAGTAGCCTCCA+TGG | - | chr4_1:61739346-61739365 | None:intergenic | 50.0% | |
TGGAGGCTACTTCCTGATCA+AGG | + | chr4_1:61739346-61739365 | Msa0562120:CDS | 50.0% | |
GGAGGCTACTTCCTGATCAA+GGG | + | chr4_1:61739347-61739366 | Msa0562120:CDS | 50.0% | |
GAAGTTATGGCGCCTATTGG+TGG | + | chr4_1:61739558-61739577 | Msa0562120:CDS | 50.0% | |
GGTCAAAATCCGCCACCAAT+AGG | - | chr4_1:61739573-61739592 | None:intergenic | 50.0% | |
!! | GGATTTTGACCTCGTCGATG+TGG | + | chr4_1:61739582-61739601 | Msa0562120:CDS | 50.0% |
GTGAATGGCGGTCGATATTG+CGG | + | chr4_1:61739604-61739623 | Msa0562120:intron | 50.0% | |
TGAATGGCGGTCGATATTGC+GGG | + | chr4_1:61739605-61739624 | Msa0562120:intron | 50.0% | |
ATTGGTGGAAGGTTCCACAG+AGG | + | chr4_1:61740036-61740055 | Msa0562120:CDS | 50.0% | |
TTGGTGGAAGGTTCCACAGA+GGG | + | chr4_1:61740037-61740056 | Msa0562120:CDS | 50.0% | |
TTTATCGTCTGCCTCACGGA+TGG | - | chr4_1:61740224-61740243 | None:intergenic | 50.0% | |
TCGTCAATAGATTCTGCGGG+TGG | - | chr4_1:61740316-61740335 | None:intergenic | 50.0% | |
GGCTAGGTACCTAGCTTACA+TGG | + | chr4_1:61740384-61740403 | Msa0562120:CDS | 50.0% | |
GCCGCCGAAAAACTGATAAC+AGG | + | chr4_1:61740434-61740453 | Msa0562120:CDS | 50.0% | |
GCTCTGCAGAGAGACCTTTA+TGG | + | chr4_1:61740553-61740572 | Msa0562120:CDS | 50.0% | |
! | GAGCGTTTTCTACTGGAGCA+TGG | + | chr4_1:61740641-61740660 | Msa0562120:CDS | 50.0% |
TCTGGTGTGGTTGCAACTCT+TGG | + | chr4_1:61740694-61740713 | Msa0562120:CDS | 50.0% | |
CTGGTGTGGTTGCAACTCTT+GGG | + | chr4_1:61740695-61740714 | Msa0562120:CDS | 50.0% | |
TCAGTACACAGGAAAGGTCG+GGG | + | chr4_1:61740771-61740790 | Msa0562120:CDS | 50.0% | |
TTGCAGGCATCCTTCTCACT+GGG | + | chr4_1:61741431-61741450 | Msa0562120:intron | 50.0% | |
CAAACCTTACCCCAGTGAGA+AGG | - | chr4_1:61741444-61741463 | None:intergenic | 50.0% | |
TTCCTAAATGGGGACTGGGT+TGG | + | chr4_1:61741633-61741652 | Msa0562120:CDS | 50.0% | |
CATGGAGAGAACCCATATGG+TGG | + | chr4_1:61741793-61741812 | Msa0562120:intron | 50.0% | |
TTCTCACAAGGGGAAAGTGG+GGG | - | chr4_1:61742321-61742340 | None:intergenic | 50.0% | |
CTTCTCACAAGGGGAAAGTG+GGG | - | chr4_1:61742322-61742341 | None:intergenic | 50.0% | |
GCTTCTCACAAGGGGAAAGT+GGG | - | chr4_1:61742323-61742342 | None:intergenic | 50.0% | |
AGCTTCTCACAAGGGGAAAG+TGG | - | chr4_1:61742324-61742343 | None:intergenic | 50.0% | |
AAGGATTCTCCGTCCACTCT+TGG | + | chr4_1:61742628-61742647 | Msa0562120:CDS | 50.0% | |
CGCCATTATCCAATAGGGAC+TGG | - | chr4_1:61742706-61742725 | None:intergenic | 50.0% | |
GAGGACTTCAAGACTGCTTG+GGG | + | chr4_1:61742755-61742774 | Msa0562120:CDS | 50.0% | |
GGTACAACACTCTCCTAGCA+TGG | - | chr4_1:61742898-61742917 | None:intergenic | 50.0% | |
GGCCTGAGAAGAATGCTTCT+GGG | - | chr4_1:61742924-61742943 | None:intergenic | 50.0% | |
TGGCCTGAGAAGAATGCTTC+TGG | - | chr4_1:61742925-61742944 | None:intergenic | 50.0% | |
AACCGTGCTTCTTTGCAACG+AGG | + | chr4_1:61743172-61743191 | Msa0562120:CDS | 50.0% | |
GTGGCGATATTATCATCGGG+CGG | + | chr4_1:61743371-61743390 | Msa0562120:CDS | 50.0% | |
CAGGTTAGAAGCCCAGTTCT+TGG | + | chr4_1:61743767-61743786 | Msa0562120:intron | 50.0% | |
CTCCAGTATGCATGGACAGA+AGG | + | chr4_1:61743799-61743818 | Msa0562120:CDS | 50.0% | |
ACCCTTCTGTCCATGCATAC+TGG | - | chr4_1:61743804-61743823 | None:intergenic | 50.0% | |
!!! | GCATGGACAGAAGGGTGTTT+TGG | + | chr4_1:61743808-61743827 | Msa0562120:CDS | 50.0% |
TTTCCCTCACGACAAACTCC+TGG | + | chr4_1:61743908-61743927 | Msa0562120:CDS | 50.0% | |
TGTCCAGGAGTTTGTCGTGA+GGG | - | chr4_1:61743914-61743933 | None:intergenic | 50.0% | |
TTGTCCAGGAGTTTGTCGTG+AGG | - | chr4_1:61743915-61743934 | None:intergenic | 50.0% | |
!! | ACTAGAGGCTGCTTTGGGAA+AGG | + | chr4_1:61743937-61743956 | Msa0562120:CDS | 50.0% |
!! | CTAGAGGCTGCTTTGGGAAA+GGG | + | chr4_1:61743938-61743957 | Msa0562120:CDS | 50.0% |
! | GTCGGTAATGGCTTCAACAG+AGG | - | chr4_1:61744011-61744030 | None:intergenic | 50.0% |
CCTATGAAGCTGGTCGGTAA+TGG | - | chr4_1:61744023-61744042 | None:intergenic | 50.0% | |
CCATTACCGACCAGCTTCAT+AGG | + | chr4_1:61744020-61744039 | Msa0562120:CDS | 50.0% | |
! | GCCTGAAAGCATGTCAGTAC+TGG | + | chr4_1:61744315-61744334 | Msa0562120:intron | 50.0% |
!!! | GCAGAGCTGGCTTTTCAAGA+TGG | + | chr4_1:61745144-61745163 | Msa0562120:intron | 50.0% |
!!! | GAGCTGGCTTTTCAAGATGG+GGG | + | chr4_1:61745147-61745166 | Msa0562120:intron | 50.0% |
ACGAACGAGTATACAACGGG+AGG | + | chr4_1:61745171-61745190 | Msa0562120:CDS | 50.0% | |
TAGTGATCGCACCATCTCAC+CGG | - | chr4_1:61745198-61745217 | None:intergenic | 50.0% | |
GCAGACGCTGGTAGAATGTT+GGG | - | chr4_1:61745232-61745251 | None:intergenic | 50.0% | |
TGCAGACGCTGGTAGAATGT+TGG | - | chr4_1:61745233-61745252 | None:intergenic | 50.0% | |
CGTGATTGCCTGATAGCTCA+CGG | + | chr4_1:61745368-61745387 | Msa0562120:CDS | 50.0% | |
ACGAATCACTCAGGGTGAAG+AGG | - | chr4_1:61745418-61745437 | None:intergenic | 50.0% | |
ATCTTCCGTCCACCAGATAC+CGG | - | chr4_1:61745494-61745513 | None:intergenic | 50.0% | |
GTTGTGGCCAGTGTTCCATA+TGG | + | chr4_1:61745557-61745576 | Msa0562120:CDS | 50.0% | |
TCTCAGGAGCTGTTCAGCAT+GGG | + | chr4_1:61745593-61745612 | Msa0562120:CDS | 50.0% | |
!! | GTCTGGGGAAAGCATTAGAG+AGG | - | chr4_1:61745675-61745694 | None:intergenic | 50.0% |
!! | TTTTCTGGGAGAGGAGCTTC+CGG | - | chr4_1:61745865-61745884 | None:intergenic | 50.0% |
GGTGATCTCACTGTTACGCC+AGG | + | chr4_1:61738441-61738460 | Msa0562120:CDS | 55.0% | |
CCTTCTCAGCACCCTTGATC+AGG | - | chr4_1:61739361-61739380 | None:intergenic | 55.0% | |
!! | CCTGATCAAGGGTGCTGAGA+AGG | + | chr4_1:61739358-61739377 | Msa0562120:CDS | 55.0% |
GTTATGGCGCCTATTGGTGG+CGG | + | chr4_1:61739561-61739580 | Msa0562120:CDS | 55.0% | |
GACCTCGTCGATGTGGTGAA+TGG | + | chr4_1:61739589-61739608 | Msa0562120:intron | 55.0% | |
CTCGTCGATGTGGTGAATGG+CGG | + | chr4_1:61739592-61739611 | Msa0562120:intron | 55.0% | |
TGCACATGCTCGGAAGCGAA+TGG | + | chr4_1:61740525-61740544 | Msa0562120:CDS | 55.0% | |
GCACATGCTCGGAAGCGAAT+GGG | + | chr4_1:61740526-61740545 | Msa0562120:CDS | 55.0% | |
TGCTCGGAAGCGAATGGGAA+AGG | + | chr4_1:61740531-61740550 | Msa0562120:CDS | 55.0% | |
GTTGCAGGCATCCTTCTCAC+TGG | + | chr4_1:61741430-61741449 | Msa0562120:intron | 55.0% | |
TGCAGGCATCCTTCTCACTG+GGG | + | chr4_1:61741432-61741451 | Msa0562120:intron | 55.0% | |
GCATCCTTCTCACTGGGGTA+AGG | + | chr4_1:61741437-61741456 | Msa0562120:CDS | 55.0% | |
CTCCAACCCAGTCCCCATTT+AGG | - | chr4_1:61741638-61741657 | None:intergenic | 55.0% | |
TGTCGTGAGGGAAATGCGTG+AGG | - | chr4_1:61743902-61743921 | None:intergenic | 55.0% | |
GCAGCCTCTAGTAGTTGTCC+AGG | - | chr4_1:61743929-61743948 | None:intergenic | 55.0% | |
!! | GGAAAGGGCATCGCTTGTGT+TGG | + | chr4_1:61743953-61743972 | Msa0562120:CDS | 55.0% |
CGAGTATACAACGGGAGGAC+CGG | + | chr4_1:61745176-61745195 | Msa0562120:CDS | 55.0% | |
GGTCAATGGGTGAACTGGAC+CGG | - | chr4_1:61745291-61745310 | None:intergenic | 55.0% | |
TGTCGGGTCAATGGGTGAAC+TGG | - | chr4_1:61745296-61745315 | None:intergenic | 55.0% | |
AATCGCTTCCTGTCAGCGAC+AGG | - | chr4_1:61745320-61745339 | None:intergenic | 55.0% | |
GTCGCTGACAGGAAGCGATT+TGG | + | chr4_1:61745320-61745339 | Msa0562120:CDS | 55.0% | |
! | GCTGACAGGAAGCGATTTGG+AGG | + | chr4_1:61745323-61745342 | Msa0562120:CDS | 55.0% |
CTGATGCACCGTGAGCTATC+AGG | - | chr4_1:61745379-61745398 | None:intergenic | 55.0% | |
GTGATCTTGCGACCGGTATC+TGG | + | chr4_1:61745479-61745498 | Msa0562120:CDS | 55.0% | |
ATCTTGCGACCGGTATCTGG+TGG | + | chr4_1:61745482-61745501 | Msa0562120:CDS | 55.0% | |
! | TCTGGTGGACGGAAGATTCG+AGG | + | chr4_1:61745497-61745516 | Msa0562120:CDS | 55.0% |
GTCTCAGGAGCTGTTCAGCA+TGG | + | chr4_1:61745592-61745611 | Msa0562120:CDS | 55.0% | |
CGCCATTCACCACATCGACG+AGG | - | chr4_1:61739594-61739613 | None:intergenic | 60.0% | |
! | TGAGTTGGCTGGTGAGCTGC+TGG | + | chr4_1:61740480-61740499 | Msa0562120:CDS | 60.0% |
!! | ATCGGGCGGTGTGCTGATTC+CGG | + | chr4_1:61743385-61743404 | Msa0562120:CDS | 60.0% |
CGACAGGCTGTCGGGTCAAT+GGG | - | chr4_1:61745304-61745323 | None:intergenic | 60.0% | |
TCCTGTCAGCGACAGGCTGT+CGG | - | chr4_1:61745313-61745332 | None:intergenic | 60.0% | |
TGCGACCGGTATCTGGTGGA+CGG | + | chr4_1:61745486-61745505 | Msa0562120:CDS | 60.0% | |
!! | TCGGGCGGTGTGCTGATTCC+GGG | + | chr4_1:61743386-61743405 | Msa0562120:CDS | 65.0% |
!! | GCGGTGTGCTGATTCCGGGA+TGG | + | chr4_1:61743390-61743409 | Msa0562120:CDS | 65.0% |
CAACGGGAGGACCGGTGAGA+TGG | + | chr4_1:61745184-61745203 | Msa0562120:CDS | 65.0% | |
CGGACATGTGGTGCAGACGC+TGG | - | chr4_1:61745244-61745263 | None:intergenic | 65.0% | |
GCGACAGGCTGTCGGGTCAA+TGG | - | chr4_1:61745305-61745324 | None:intergenic | 65.0% | |
CCTGTCAGCGACAGGCTGTC+GGG | - | chr4_1:61745312-61745331 | None:intergenic | 65.0% | |
CCCGACAGCCTGTCGCTGAC+AGG | + | chr4_1:61745309-61745328 | Msa0562120:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_1 | gene | 61738023 | 61746035 | 61738023 | ID=Msa0562120;Name=Msa0562120 |
chr4_1 | mRNA | 61738023 | 61746035 | 61738023 | ID=Msa0562120-mRNA-1;Parent=Msa0562120;Name=Msa0562120-mRNA-1;_AED=0.02;_eAED=0.02;_QI=175|0.71|0.87|0.87|1|1|8|386|1208 |
chr4_1 | exon | 61738023 | 61738656 | 61738023 | ID=Msa0562120-mRNA-1:exon:19432;Parent=Msa0562120-mRNA-1 |
chr4_1 | exon | 61739167 | 61739379 | 61739167 | ID=Msa0562120-mRNA-1:exon:19433;Parent=Msa0562120-mRNA-1 |
chr4_1 | exon | 61739541 | 61739603 | 61739541 | ID=Msa0562120-mRNA-1:exon:19434;Parent=Msa0562120-mRNA-1 |
chr4_1 | exon | 61739926 | 61740806 | 61739926 | ID=Msa0562120-mRNA-1:exon:19435;Parent=Msa0562120-mRNA-1 |
chr4_1 | exon | 61741437 | 61741728 | 61741437 | ID=Msa0562120-mRNA-1:exon:19436;Parent=Msa0562120-mRNA-1 |
chr4_1 | exon | 61742572 | 61743516 | 61742572 | ID=Msa0562120-mRNA-1:exon:19437;Parent=Msa0562120-mRNA-1 |
chr4_1 | exon | 61743770 | 61744041 | 61743770 | ID=Msa0562120-mRNA-1:exon:19438;Parent=Msa0562120-mRNA-1 |
chr4_1 | exon | 61745148 | 61746035 | 61745148 | ID=Msa0562120-mRNA-1:exon:19439;Parent=Msa0562120-mRNA-1 |
chr4_1 | five_prime_UTR | 61738023 | 61738197 | 61738023 | ID=Msa0562120-mRNA-1:five_prime_utr;Parent=Msa0562120-mRNA-1 |
chr4_1 | CDS | 61738198 | 61738656 | 61738198 | ID=Msa0562120-mRNA-1:cds;Parent=Msa0562120-mRNA-1 |
chr4_1 | CDS | 61739167 | 61739379 | 61739167 | ID=Msa0562120-mRNA-1:cds;Parent=Msa0562120-mRNA-1 |
chr4_1 | CDS | 61739541 | 61739603 | 61739541 | ID=Msa0562120-mRNA-1:cds;Parent=Msa0562120-mRNA-1 |
chr4_1 | CDS | 61739926 | 61740806 | 61739926 | ID=Msa0562120-mRNA-1:cds;Parent=Msa0562120-mRNA-1 |
chr4_1 | CDS | 61741437 | 61741728 | 61741437 | ID=Msa0562120-mRNA-1:cds;Parent=Msa0562120-mRNA-1 |
chr4_1 | CDS | 61742572 | 61743516 | 61742572 | ID=Msa0562120-mRNA-1:cds;Parent=Msa0562120-mRNA-1 |
chr4_1 | CDS | 61743770 | 61744041 | 61743770 | ID=Msa0562120-mRNA-1:cds;Parent=Msa0562120-mRNA-1 |
chr4_1 | CDS | 61745148 | 61745649 | 61745148 | ID=Msa0562120-mRNA-1:cds;Parent=Msa0562120-mRNA-1 |
chr4_1 | three_prime_UTR | 61745650 | 61746035 | 61745650 | ID=Msa0562120-mRNA-1:three_prime_utr;Parent=Msa0562120-mRNA-1 |
Gene Sequence |
Protein sequence |