AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1368770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1368770 MtrunA17_Chr3g0136911 95.157 1239 9 1 1 1239 1 1188 0.0 2431
Msa1368770 MtrunA17_Chr8g0375171 92.084 1238 44 3 2 1239 3 1186 0.0 2351
Msa1368770 MtrunA17_Chr1g0155911 33.979 1239 672 32 53 1237 36 1182 0.0 640
Msa1368770 MtrunA17_Chr3g0142441 94.257 296 17 0 613 908 2 297 0.0 578
Msa1368770 MtrunA17_Chr3g0142431 95.510 245 11 0 995 1239 1 245 1.00e-164 489
Msa1368770 MtrunA17_Chr8g0345421 28.664 1235 703 34 53 1237 24 1130 2.51e-130 428
Msa1368770 MtrunA17_Chr4g0069391 28.586 983 572 34 338 1235 258 1195 1.11e-87 310
Msa1368770 MtrunA17_Chr3g0142451 91.176 102 9 0 483 584 1 102 2.14e-60 201
Msa1368770 MtrunA17_Chr3g0142471 81.250 96 18 0 131 226 6 101 2.91e-48 168
Msa1368770 MtrunA17_Chr3g0142481 76.812 69 11 2 1 68 1 65 9.77e-29 109
Msa1368770 MtrunA17_Chr4g0016641 25.714 455 259 14 825 1232 636 1058 3.44e-28 123
Msa1368770 MtrunA17_CPg0493041 25.714 455 259 14 825 1232 636 1058 3.44e-28 123
Msa1368770 MtrunA17_Chr3g0142461 74.138 58 14 1 305 361 1 58 3.33e-21 88.2
Msa1368770 MtrunA17_Chr1g0159041 24.579 297 180 10 764 1059 61 314 1.68e-15 79.3
Msa1368770 MtrunA17_Chr1g0154941 25.000 180 97 6 53 226 23 170 1.36e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1368770 AT3G23780.1 64.843 1243 344 14 17 1239 3 1172 0.0 1610
Msa1368770 AT3G23780.2 64.843 1243 344 14 17 1239 3 1172 0.0 1610
Msa1368770 AT3G18090.1 65.419 1122 301 10 136 1239 3 1055 0.0 1482
Msa1368770 AT3G18090.2 62.148 959 276 10 136 1076 3 892 0.0 1187
Msa1368770 AT3G18090.3 62.238 956 274 10 136 1073 3 889 0.0 1186
Msa1368770 AT4G21710.1 34.113 1240 669 33 53 1237 33 1179 0.0 634
Msa1368770 AT5G45140.2 29.476 1279 702 39 19 1230 7 1152 1.23e-137 449
Msa1368770 AT5G45140.1 29.476 1279 702 39 19 1230 7 1152 1.23e-137 449
Msa1368770 AT1G29940.1 27.365 983 582 28 338 1235 234 1169 3.63e-82 294
Msa1368770 AT5G45140.3 27.158 869 473 29 53 878 39 790 8.33e-65 237
Msa1368770 ATCG00190.1 25.376 465 288 13 767 1186 577 1027 4.21e-27 120

Find 332 sgRNAs with CRISPR-Local

Find 535 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGAAGACATTGTTAATTT+TGG 0.067293 tig0018650:-223326 Msa1368770:CDS
AAAGCATCAACTCTTATATT+TGG 0.127597 tig0018650:+223632 None:intergenic
ACCACTTTGTGGTACATTTA+TGG 0.162808 tig0018650:+226887 None:intergenic
CTTGATATGTCATTCTTATT+AGG 0.167440 tig0018650:-223761 Msa1368770:CDS
CGGAGGCTACTTTCTGATTA+AGG 0.193770 tig0018650:-227217 Msa1368770:CDS
TGGTCAAAATTGCAGAAATT+TGG 0.199962 tig0018650:-226868 Msa1368770:CDS
GGTCCGATCGCTGATATTTA+TGG 0.227588 tig0018650:-221934 Msa1368770:CDS
TGTCGGGTCAGCGGGTGAAC+TGG 0.228681 tig0018650:+221846 None:intergenic
AAATAGGATGGTTGTTAAAT+TGG 0.238146 tig0018650:-226523 Msa1368770:CDS
CCAAAGTCTGAATTCTATAA+TGG 0.247666 tig0018650:-223512 Msa1368770:CDS
TTGAAGTCCTCTTCTTCTTC+AGG 0.252661 tig0018650:+223854 None:intergenic
AAAAGGATGGAAAGGATTTC+TGG 0.253506 tig0018650:-225865 Msa1368770:CDS
CCTCTGCAACCTGGCATGTC+TGG 0.253652 tig0018650:+227680 None:intergenic
AGTAATCTGCTCAAGATTAA+AGG 0.253696 tig0018650:-223941 Msa1368770:CDS
CGTTATGCTACGGTTAAGTT+TGG 0.257432 tig0018650:-227771 Msa1368770:CDS
TTGGAGACCATTTGTAATAA+TGG 0.265166 tig0018650:+225924 None:intergenic
GGAAAGATACAGAGTAAAAT+TGG 0.269746 tig0018650:-223305 Msa1368770:CDS
GCCCTGCAGAGAGACCTTTA+TGG 0.273489 tig0018650:-225988 Msa1368770:CDS
TACATTGATAAAGATATTAA+AGG 0.273662 tig0018650:-227342 Msa1368770:CDS
GCATGGACAGAAGGGTGTTT+TGG 0.274857 tig0018650:-222787 Msa1368770:CDS
GAAAAGAAGCTTAAGCTTAA+AGG 0.278424 tig0018650:-228158 Msa1368770:five_prime_UTR
TACAATCAATTCATCAATTC+TGG 0.294934 tig0018650:-227879 Msa1368770:CDS
CAAAGCTGAAATTGAGAATA+AGG 0.300709 tig0018650:-223372 Msa1368770:CDS
TCTGGTGTGGTTGCAACTCT+TGG 0.303936 tig0018650:-225847 Msa1368770:CDS
TTCTTAGAGGAACGTGTAAA+AGG 0.305968 tig0018650:-226261 Msa1368770:CDS
GGGTTTCAAATATTCCATAC+TGG 0.306856 tig0018650:-226575 Msa1368770:CDS
CGCTTGAGCGACCTAAGTTT+TGG 0.310792 tig0018650:-227740 Msa1368770:CDS
TACAAAAGCAGTATTGTCTA+TGG 0.311952 tig0018650:+226828 None:intergenic
CTCCAGTAGAAAACGCTCTT+TGG 0.314169 tig0018650:+225905 None:intergenic
TGATGATACTACAACTGTTC+TGG 0.316293 tig0018650:-224923 Msa1368770:CDS
ATCAAACAGCTGAGGAAGTA+TGG 0.318968 tig0018650:+224966 None:intergenic
TAGCCTGAGAAGAATGCTTC+TGG 0.321084 tig0018650:+223675 None:intergenic
TCATCAGCACCTTTCTTAGA+AGG 0.322385 tig0018650:+227801 None:intergenic
GGTCAAAATTGCAGAAATTT+GGG 0.323125 tig0018650:-226867 Msa1368770:CDS
ACCGAGTTCGTTGAGGATTT+CGG 0.334040 tig0018650:+227986 None:intergenic
CGATTTGGAGGTATCAAGTT+TGG 0.336084 tig0018650:-221804 Msa1368770:CDS
GACAATAACTTTGCACCATA+TGG 0.336139 tig0018650:+221567 None:intergenic
TAAATCTTTCCAGTCCCTAT+TGG 0.337687 tig0018650:-223903 Msa1368770:CDS
AAGCATCAACTCTTATATTT+GGG 0.338326 tig0018650:+223633 None:intergenic
CTTGGAAAACCTGGATATCT+TGG 0.343060 tig0018650:-223551 Msa1368770:CDS
TGTGCTTTAGCTTTATACTA+TGG 0.343766 tig0018650:+223183 None:intergenic
CTGAAGCACCATGAGCTATC+AGG 0.344112 tig0018650:+221763 None:intergenic
CCAAAATTAACAATGTCTTC+AGG 0.345264 tig0018650:+223326 None:intergenic
AAAAGAAGCTTAAGCTTAAA+GGG 0.348602 tig0018650:-228157 Msa1368770:five_prime_UTR
AAGCATTCTTCTCAGGCTAT+TGG 0.349703 tig0018650:-223671 Msa1368770:CDS
GACCACGCCGATGTGGTAAA+TGG 0.350558 tig0018650:-226934 Msa1368770:CDS
CAGGTTAGGAGCCCAGTTCT+TGG 0.351963 tig0018650:-222828 Msa1368770:CDS
AGTCGCAGATGAAGAGAAAT+AGG 0.352580 tig0018650:-226539 Msa1368770:CDS
TAGCTCTGCCACAAATGATA+TGG 0.355404 tig0018650:+224846 None:intergenic
CCATTACTGACCAGCTTCAT+AGG 0.355712 tig0018650:-222575 Msa1368770:intron
ATTGTTGATCTCATCGATTA+TGG 0.355906 tig0018650:-226381 Msa1368770:CDS
TGTGGATTTATAACAATATC+AGG 0.355965 tig0018650:+222714 None:intergenic
TTCCAGTCCCTATTGGATAA+TGG 0.357748 tig0018650:-223896 Msa1368770:CDS
CCTGAATTTGACTTTGTCTT+CGG 0.358897 tig0018650:+221878 None:intergenic
CTCCGACCCAGTCCCCATTT+AGG 0.359540 tig0018650:+224881 None:intergenic
GATACGAGGGAAATAACTAT+TGG 0.360774 tig0018650:-227315 Msa1368770:CDS
GATGATGGCTTTCCATTTGT+TGG 0.362742 tig0018650:-223263 Msa1368770:CDS
ATCGGGCGGTGTGCTGATTC+CGG 0.370475 tig0018650:-223212 Msa1368770:CDS
AGATCAGACTTGACCATAAC+AGG 0.371245 tig0018650:+227285 None:intergenic
TGAGTTAGCTGGTGAGCTGC+TGG 0.372168 tig0018650:-226061 Msa1368770:CDS
CAACGAACTCGGTGATGATA+TGG 0.374454 tig0018650:-227976 Msa1368770:CDS
AAAGAAATGCAAGGGCATTC+AGG 0.374525 tig0018650:+221355 None:intergenic
CAATCACGCCATTATCCAAT+AGG 0.374576 tig0018650:+223888 None:intergenic
CAAGGGCATTCAGGCAAATC+AGG 0.378023 tig0018650:+221364 None:intergenic
GGTTTATGGAGAAAGGGTTT+TGG 0.378201 tig0018650:+228124 None:intergenic
GTATATATCAGTTTGGTTCC+TGG 0.379323 tig0018650:-221429 Msa1368770:three_prime_UTR
TGCAAATTTGCTCCAACAAA+TGG 0.379930 tig0018650:+223251 None:intergenic
TGTCATAAATTACTCCTAAC+TGG 0.383412 tig0018650:+221392 None:intergenic
GAGAACTTATCTCCAAGAAC+TGG 0.386193 tig0018650:+222816 None:intergenic
CCGAAGACAAAGTCAAATTC+AGG 0.388621 tig0018650:-221878 Msa1368770:CDS
TGTTCAGATCTGAGCATATA+AGG 0.389042 tig0018650:-223400 Msa1368770:CDS
CGGACATGTGGTGCAGTCTC+TGG 0.392560 tig0018650:+221898 None:intergenic
CGAAGTGATAAGTTTAAGAC+TGG 0.396101 tig0018650:-227375 Msa1368770:CDS
GGAGGCTACTTTCTGATTAA+GGG 0.396161 tig0018650:-227216 Msa1368770:CDS
GTGATCTTGCGACCGGTATC+TGG 0.396475 tig0018650:-221660 Msa1368770:CDS
GTCGCTGACAGGAAGCGATT+TGG 0.397585 tig0018650:-221819 Msa1368770:CDS
TTCCTCAGCTGTTTGATTGT+GGG 0.401843 tig0018650:-224960 Msa1368770:CDS
TTCAGATTCCATATCATTTG+TGG 0.401910 tig0018650:-224854 Msa1368770:CDS
ACCCTTCTGTCCATGCATAC+TGG 0.403623 tig0018650:+222794 None:intergenic
ATAAGTGGAATGCTCATATC+CGG 0.403703 tig0018650:-221311 Msa1368770:three_prime_UTR
TGGGGTGTTCAGTATTTGTT+TGG 0.404123 tig0018650:-223824 Msa1368770:CDS
CTTCCTCAGCTGTTTGATTG+TGG 0.405684 tig0018650:-224961 Msa1368770:CDS
ATTGATTGTACGAGTTGATT+TGG 0.406359 tig0018650:+227892 None:intergenic
TAAATGGTGGTCAATATTGC+AGG 0.408289 tig0018650:-226918 Msa1368770:CDS
ACATTGATAAAGATATTAAA+GGG 0.408591 tig0018650:-227341 Msa1368770:CDS
TTGAAAGCAACAGCCCAGTA+TGG 0.411906 tig0018650:+226561 None:intergenic
TTCGTTGAGGATTTCGGCGT+TGG 0.412731 tig0018650:+227992 None:intergenic
AGAGGACTTCAAGACTGCTT+GGG 0.413762 tig0018650:-223843 Msa1368770:CDS
ATGTTTCCTTGATACCAGTT+AGG 0.415335 tig0018650:-221406 Msa1368770:three_prime_UTR
CAAAGTCTGAATTCTATAAT+GGG 0.419058 tig0018650:-223511 Msa1368770:CDS
CAACACCAACTACACAGAAA+TGG 0.421651 tig0018650:-228045 Msa1368770:CDS
ATTAGGTGTATATATCAGTT+TGG 0.422360 tig0018650:-221436 Msa1368770:three_prime_UTR
CTCCATAAAGGTCTCTCTGC+AGG 0.422980 tig0018650:+225986 None:intergenic
AAATTAGGGTTTATGGAGAA+AGG 0.424782 tig0018650:+228117 None:intergenic
TGCTGTTGTTTCGCTGAGAC+AGG 0.424938 tig0018650:-223102 Msa1368770:intron
CTGGTGTGGTTGCAACTCTT+GGG 0.425235 tig0018650:-225846 Msa1368770:CDS
TTTGGGATTTCTGGAGTCTC+AGG 0.425430 tig0018650:-222769 Msa1368770:CDS
TTTCCTTCGCGACAAACTCC+TGG 0.425956 tig0018650:-222687 Msa1368770:CDS
GTTGCAGGCATCCTTCTCAC+TGG 0.426530 tig0018650:-225086 Msa1368770:intron
GGTCAGCGGGTGAACTGGGC+CGG 0.426662 tig0018650:+221851 None:intergenic
TCTGATTAAGGGTGCTGAAA+AGG 0.428079 tig0018650:-227205 Msa1368770:intron
TCCTGTCAGCGACAGGCTGT+CGG 0.428603 tig0018650:+221829 None:intergenic
GTCCGATCGCTGATATTTAT+GGG 0.428946 tig0018650:-221933 Msa1368770:CDS
GTCGGGTCAGCGGGTGAACT+GGG 0.429792 tig0018650:+221847 None:intergenic
AAGGATTCTCCGTCCACTCT+TGG 0.429803 tig0018650:-223969 Msa1368770:CDS
GGTCAAAATCTGCCACCAAT+AGG 0.432835 tig0018650:+226953 None:intergenic
TCAGGTATATGTTATGAAGA+AGG 0.434148 tig0018650:-227400 Msa1368770:intron
AAATATTTCTGAAGAGACTC+TGG 0.434667 tig0018650:-226596 Msa1368770:CDS
GCATCCTTCTCACTGGGGTA+AGG 0.434903 tig0018650:-225079 Msa1368770:CDS
GAGAAGAATGCTTCTGGGAT+TGG 0.435150 tig0018650:+223681 None:intergenic
ACAACTACTAGAGGCTGCTT+TGG 0.435996 tig0018650:-222664 Msa1368770:CDS
GACGCTTCCATTATTACAAA+TGG 0.436306 tig0018650:-225931 Msa1368770:CDS
AATTCAGCCATGGTTTGTAA+TGG 0.438058 tig0018650:+225814 None:intergenic
AATGTCCATTTCTGTGTAGT+TGG 0.438246 tig0018650:+228040 None:intergenic
GTTCTTCTACTAGCATATAC+TGG 0.438779 tig0018650:-226129 Msa1368770:CDS
CAAGCCGCTTTCGATTCCTT+CGG 0.440812 tig0018650:-227852 Msa1368770:CDS
GGTGACTGATTAAACCGTAT+TGG 0.443432 tig0018650:+227913 None:intergenic
CTCTGCAACCTGGCATGTCT+GGG 0.444306 tig0018650:+227681 None:intergenic
GAACTTCTCGTTCTCCATAA+AGG 0.446635 tig0018650:+225974 None:intergenic
ATGGCAGTTATGGCGCCTAT+TGG 0.447339 tig0018650:-226968 Msa1368770:intron
AATTGCAGAAATTTGGGTCT+CGG 0.447548 tig0018650:-226861 Msa1368770:CDS
CTAATTCAAAAGTCTAGTCT+AGG 0.448338 tig0018650:+221454 None:intergenic
CGAAAGGGGTTATGTTCAAA+AGG 0.455941 tig0018650:-223159 Msa1368770:CDS
GAATTGTTTAAACTTATAAG+TGG 0.455984 tig0018650:-221326 Msa1368770:three_prime_UTR
TCGGGCGGTGTGCTGATTCC+GGG 0.456470 tig0018650:-223211 Msa1368770:CDS
CAACTACTAGAGGCTGCTTT+GGG 0.457722 tig0018650:-222663 Msa1368770:CDS
CCTGTCAGCGACAGGCTGTC+GGG 0.459295 tig0018650:+221830 None:intergenic
TATTGGGAGACTGCCTGTTA+TGG 0.459953 tig0018650:-227298 Msa1368770:CDS
AGCCATGGTTTGTAATGGAT+TGG 0.460916 tig0018650:+225819 None:intergenic
CTAGAGGCTGCTTTGGGAAA+GGG 0.461237 tig0018650:-222657 Msa1368770:CDS
GTTATGCTACGGTTAAGTTT+GGG 0.463498 tig0018650:-227770 Msa1368770:CDS
TTCAGTACACAGGAAAGGTC+GGG 0.465796 tig0018650:-225771 Msa1368770:CDS
CGACAGGCTGTCGGGTCAGC+GGG 0.468169 tig0018650:+221838 None:intergenic
AAGAGGACTTCAAGACTGCT+TGG 0.469345 tig0018650:-223844 Msa1368770:CDS
AATTAGGGTTTATGGAGAAA+GGG 0.470364 tig0018650:+228118 None:intergenic
GATGATACTACAACTGTTCT+GGG 0.472067 tig0018650:-224922 Msa1368770:CDS
GCAGTCTCTGGTAGAATGTT+GGG 0.473075 tig0018650:+221910 None:intergenic
TGCAGTCTCTGGTAGAATGT+TGG 0.474735 tig0018650:+221909 None:intergenic
CAGTATTTGTTTGGCAAAGA+GGG 0.476056 tig0018650:-223815 Msa1368770:CDS
CGAGTATACAACGGAAGGAC+CGG 0.476500 tig0018650:-221963 Msa1368770:CDS
GAGGAATGAGTTGCCTCATC+AGG 0.478810 tig0018650:-224809 Msa1368770:intron
TGGTGCAAAGTTATTGTCTC+AGG 0.481951 tig0018650:-221562 Msa1368770:CDS
GACACATCCTTTCAAAAGGA+TGG 0.483147 tig0018650:-225878 Msa1368770:CDS
GCACATGCTAGGAAGCGAAT+GGG 0.484646 tig0018650:-226015 Msa1368770:CDS
CCATTATAGAATTCAGACTT+TGG 0.484719 tig0018650:+223512 None:intergenic
CTTGGACACATCCTTTCAAA+AGG 0.485028 tig0018650:-225882 Msa1368770:CDS
TTACTCTGACCAAGATATCC+AGG 0.485264 tig0018650:+223542 None:intergenic
GCAGCCTCTAGTAGTTGTCC+AGG 0.486041 tig0018650:+222669 None:intergenic
ATACGAGGGAAATAACTATT+GGG 0.487034 tig0018650:-227314 Msa1368770:CDS
GGTGATCTCACTGTTACGCC+TGG 0.488355 tig0018650:-227831 Msa1368770:CDS
GTCTGAAAGAGTGGTCTTTG+TGG 0.490054 tig0018650:+223590 None:intergenic
GTCATGTTCTTCGACCAATA+CGG 0.490177 tig0018650:-227927 Msa1368770:CDS
CACATTTATCGTCTGCCTCA+CGG 0.490360 tig0018650:+226316 None:intergenic
ATCCCAGAAGCATTCTTCTC+AGG 0.490953 tig0018650:-223678 Msa1368770:CDS
CGCCATTATCCAATAGGGAC+TGG 0.492490 tig0018650:+223894 None:intergenic
TGTTCTTCTTAATTCAGCCA+TGG 0.493474 tig0018650:+225804 None:intergenic
TAGGATGGTTGTTAAATTGG+TGG 0.495089 tig0018650:-226520 Msa1368770:CDS
CAAAGTGGTGATATTATCAT+CGG 0.496605 tig0018650:-223230 Msa1368770:CDS
TTGCAGGCATCCTTCTCACT+GGG 0.496735 tig0018650:-225085 Msa1368770:intron
CCCGACAGCCTGTCGCTGAC+AGG 0.497438 tig0018650:-221830 Msa1368770:CDS
CCTTCACCACACCAAAACTT+AGG 0.497897 tig0018650:+227729 None:intergenic
AATCGCTTCCTGTCAGCGAC+AGG 0.499397 tig0018650:+221822 None:intergenic
AACAAGAGGCTTGAGTTAGC+TGG 0.506910 tig0018650:-226072 Msa1368770:CDS
AGTAGGGACCTCGAATCTTC+CGG 0.508469 tig0018650:+221634 None:intergenic
AGGTATCAAGTTTGGTGAGA+TGG 0.508789 tig0018650:-221796 Msa1368770:CDS
ATTACTCCTAACTGGTATCA+AGG 0.510113 tig0018650:+221400 None:intergenic
AATGGCTTCAACAGAGGAAG+TGG 0.510195 tig0018650:+222593 None:intergenic
GAAAGTTGATGTTCACATCC+AGG 0.510695 tig0018650:-227637 Msa1368770:intron
ATCTTCCGGCCACCAGATAC+CGG 0.512174 tig0018650:+221648 None:intergenic
GCATGGTCATGATTTGCAAA+TGG 0.512791 tig0018650:+223719 None:intergenic
ATCCTTTCAAAAGGATGGAA+AGG 0.513262 tig0018650:-225873 Msa1368770:CDS
TTGCAAATCATGACCATGCT+AGG 0.514874 tig0018650:-223715 Msa1368770:CDS
CTCCAGTATGCATGGACAGA+AGG 0.515563 tig0018650:-222796 Msa1368770:CDS
AATCACGCCATTATCCAATA+GGG 0.516901 tig0018650:+223889 None:intergenic
ACTAGAGGCTGCTTTGGGAA+AGG 0.518204 tig0018650:-222658 Msa1368770:CDS
GGAAAGGGCATCGCTTGTGT+TGG 0.523598 tig0018650:-222642 Msa1368770:CDS
GGTTTCAAATATTCCATACT+GGG 0.525085 tig0018650:-226574 Msa1368770:CDS
GCAGTTATGGCGCCTATTGG+TGG 0.526867 tig0018650:-226965 Msa1368770:intron
ATATAATCAAGAAGATTCCT+TGG 0.528881 tig0018650:-223453 Msa1368770:CDS
GTCTCAGGAGCTGTTCAGCA+TGG 0.529733 tig0018650:-221547 Msa1368770:CDS
AAAGCTAAAGCACACCGAAA+GGG 0.531794 tig0018650:-223174 Msa1368770:CDS
TCAACAGAGGAAGTGGAGAA+AGG 0.532899 tig0018650:+222600 None:intergenic
TCCATAAAGGTCTCTCTGCA+GGG 0.534372 tig0018650:+225987 None:intergenic
AGCCTGAGAAGAATGCTTCT+GGG 0.535263 tig0018650:+223676 None:intergenic
CCTATGAAGCTGGTCAGTAA+TGG 0.535807 tig0018650:+222575 None:intergenic
AGATGCTTCCCAGACATGCC+AGG 0.539702 tig0018650:-227689 Msa1368770:CDS
TGGTGAGCTGCTGGAGCGCG+AGG 0.542797 tig0018650:-226052 Msa1368770:CDS
AATATTTCTGAAGAGACTCT+GGG 0.543313 tig0018650:-226595 Msa1368770:CDS
TCTGATTGTCTTGGAAAACC+TGG 0.545916 tig0018650:-223560 Msa1368770:CDS
TGCGACCGGTATCTGGTGGC+CGG 0.547112 tig0018650:-221653 Msa1368770:CDS
GTTGATAGCCTTGATGATGA+TGG 0.547320 tig0018650:-223278 Msa1368770:CDS
TGGTCAAGTCTGATCTGTGT+TGG 0.547872 tig0018650:-227278 Msa1368770:CDS
ATGGTTGTTAAATTGGTGGA+AGG 0.549390 tig0018650:-226516 Msa1368770:CDS
TAAATGTGAAGCATTTCGTA+GGG 0.550339 tig0018650:-226301 Msa1368770:CDS
TGCTAGGAAGCGAATGGGGA+AGG 0.551816 tig0018650:-226010 Msa1368770:CDS
CTTTATACTATGGTCCGTCC+CGG 0.551918 tig0018650:+223193 None:intergenic
TTCAAAAGAAAAGAAATGCA+AGG 0.552475 tig0018650:+221346 None:intergenic
AATGGCGTGATTGAGCTGAT+TGG 0.554573 tig0018650:-223878 Msa1368770:CDS
TGGAAGATTACCTATGAAGC+TGG 0.555512 tig0018650:+222565 None:intergenic
GGCAAGGTATCTAGCTTACA+TGG 0.555841 tig0018650:-226157 Msa1368770:CDS
ATCGATTATGGAGAGGCAGA+TGG 0.558185 tig0018650:-226369 Msa1368770:CDS
GTGCGCATATTATCTGATGC+AGG 0.558870 tig0018650:-223992 Msa1368770:CDS
AAGTGCACTTTGCACATGCT+AGG 0.559850 tig0018650:-226026 Msa1368770:CDS
TTGGTGGAAGGTTCGACGGA+GGG 0.559939 tig0018650:-226504 Msa1368770:CDS
ATAAGTCATCCTCTGCAACC+TGG 0.560391 tig0018650:+227671 None:intergenic
GTGGTGGCCAGTGTTCCATA+TGG 0.561718 tig0018650:-221582 Msa1368770:CDS
CAACGGAAGGACCGGTGAGA+TGG 0.562507 tig0018650:-221955 Msa1368770:CDS
CAAACTTAACCGTAGCATAA+CGG 0.562948 tig0018650:+227772 None:intergenic
GCTGACAGGAAGCGATTTGG+AGG 0.563584 tig0018650:-221816 Msa1368770:CDS
GATTGGTCCTGAAGAAGAAG+AGG 0.564149 tig0018650:-223861 Msa1368770:CDS
TCAGTATTTGTTTGGCAAAG+AGG 0.564795 tig0018650:-223816 Msa1368770:CDS
TGAACCTATGTGTTCCATTG+TGG 0.566006 tig0018650:+228082 None:intergenic
TGCACATGCTAGGAAGCGAA+TGG 0.566559 tig0018650:-226016 Msa1368770:CDS
GCGACAGGCTGTCGGGTCAG+CGG 0.566910 tig0018650:+221837 None:intergenic
CTTTGCACCATATGGAACAC+TGG 0.567048 tig0018650:+221575 None:intergenic
TCTGGTGGCCGGAAGATTCG+AGG 0.567048 tig0018650:-221642 Msa1368770:CDS
CACTCGTCAATAGATTCTGC+GGG 0.567248 tig0018650:+226225 None:intergenic
GATGTCATTGTCTGAAAGAG+TGG 0.567955 tig0018650:+223581 None:intergenic
TGTCTGTCGAGATACCTGTA+TGG 0.568259 tig0018650:-226443 Msa1368770:CDS
TAAAGCTAAAGCACACCGAA+AGG 0.569174 tig0018650:-223175 Msa1368770:CDS
GTTCAGTACACAGGAAAGGT+CGG 0.569216 tig0018650:-225772 Msa1368770:CDS
AAGCTAAAGCACACCGAAAG+GGG 0.569664 tig0018650:-223173 Msa1368770:CDS
AATTTCCCCTTCACAAAACA+AGG 0.569701 tig0018650:-222744 Msa1368770:CDS
CATCGGCTGATTCACAGAAA+CGG 0.571228 tig0018650:+221610 None:intergenic
GTCAGTAATGGCTTCAACAG+AGG 0.571703 tig0018650:+222587 None:intergenic
CAGCGATCGGACCATCTCAC+CGG 0.571876 tig0018650:+221944 None:intergenic
GATAAGTTCTCCAGTATGCA+TGG 0.571930 tig0018650:-222804 Msa1368770:CDS
TAAATTGGTGGAAGGTTCGA+CGG 0.574279 tig0018650:-226508 Msa1368770:CDS
TCTCAGGAGCTGTTCAGCAT+GGG 0.574908 tig0018650:-221546 Msa1368770:CDS
ATGGAAAGCCATCATCATCA+AGG 0.577034 tig0018650:+223270 None:intergenic
ACTGGCCACCACAATGTCAT+CGG 0.577833 tig0018650:+221593 None:intergenic
ACCCCAGATGGTGAAAATTG+TGG 0.578472 tig0018650:-225042 Msa1368770:CDS
ATAAATGTGAAGCATTTCGT+AGG 0.579430 tig0018650:-226302 Msa1368770:CDS
CATCATCAAGGCTATCAACT+CGG 0.579816 tig0018650:+223282 None:intergenic
ACAATGACATCTGATTGTCT+TGG 0.579927 tig0018650:-223569 Msa1368770:CDS
TCCAGTATGCATGGACAGAA+GGG 0.580759 tig0018650:-222795 Msa1368770:CDS
TAATTCAAAAGTCTAGTCTA+GGG 0.580816 tig0018650:+221455 None:intergenic
TACCGCGCTGCAACGAAGCA+CGG 0.580917 tig0018650:+223423 None:intergenic
GTATCTGAGACGAATCACTC+AGG 0.581128 tig0018650:+221715 None:intergenic
GCCGAAATCCTCAACGAACT+CGG 0.582900 tig0018650:-227987 Msa1368770:CDS
AACCAATCCATTACAAACCA+TGG 0.584723 tig0018650:-225821 Msa1368770:CDS
TCAGCTGTTTGATTGTGGGA+TGG 0.584783 tig0018650:-224956 Msa1368770:CDS
TTCCTAAATGGGGACTGGGT+CGG 0.585134 tig0018650:-224883 Msa1368770:CDS
ACGAATCACTCAGGGTGAAG+AGG 0.588585 tig0018650:+221724 None:intergenic
GTATCTAGCTTACATGGTGA+AGG 0.589191 tig0018650:-226151 Msa1368770:CDS
TGCTACGGTTAAGTTTGGGA+AGG 0.589935 tig0018650:-227766 Msa1368770:CDS
TCAAAAGAAAAGAAATGCAA+GGG 0.590781 tig0018650:+221347 None:intergenic
GGCCCATAAATATCAGCGAT+CGG 0.593035 tig0018650:+221931 None:intergenic
TAAGTGGAATGCTCATATCC+GGG 0.593595 tig0018650:-221310 Msa1368770:three_prime_UTR
TGTCCAGGAGTTTGTCGCGA+AGG 0.593618 tig0018650:+222684 None:intergenic
GTCTTTGTGGATAAAACAGT+TGG 0.594545 tig0018650:+223603 None:intergenic
GCCATAAATGTACCACAAAG+TGG 0.595357 tig0018650:-226888 Msa1368770:CDS
TGATTCACAGAAACGGCAGT+AGG 0.595950 tig0018650:+221617 None:intergenic
GAGGACTTCAAGACTGCTTG+GGG 0.598252 tig0018650:-223842 Msa1368770:CDS
CCAGACATGCCAGGTTGCAG+AGG 0.599813 tig0018650:-227680 Msa1368770:CDS
AAAGTGGTGATATTATCATC+GGG 0.600046 tig0018650:-223229 Msa1368770:CDS
TACTAACAACCAAGAGTGGA+CGG 0.601761 tig0018650:+223960 None:intergenic
GCACTCGTCAATAGATTCTG+CGG 0.603702 tig0018650:+226224 None:intergenic
TTTATCGTCTGCCTCACGGA+TGG 0.604454 tig0018650:+226320 None:intergenic
TGAACATTACCGTTATGCTA+CGG 0.604890 tig0018650:-227781 Msa1368770:CDS
TCAACCACAATGGAACACAT+AGG 0.605155 tig0018650:-228086 Msa1368770:exon
TTCTTAGAAGGATCAAAACC+AGG 0.605160 tig0018650:+227813 None:intergenic
GATTAAAAGTGAACCTGATG+AGG 0.605290 tig0018650:+224796 None:intergenic
TGACTTTGTCTTCGGACATG+TGG 0.610967 tig0018650:+221886 None:intergenic
AGAACTTATCTCCAAGAACT+GGG 0.614017 tig0018650:+222817 None:intergenic
TTGACCACCATTTACCACAT+CGG 0.614388 tig0018650:+226927 None:intergenic
GTGCTGTCTTCGAATGATGA+GGG 0.614672 tig0018650:-223134 Msa1368770:CDS
CGTGATTGCCTGATAGCTCA+TGG 0.615327 tig0018650:-221771 Msa1368770:CDS
CTGGTATCAAGGAAACATCC+AGG 0.618423 tig0018650:+221411 None:intergenic
TATTAAAGGGGAGGATACGA+GGG 0.623722 tig0018650:-227328 Msa1368770:CDS
CAAACCTTACCCCAGTGAGA+AGG 0.623788 tig0018650:+225075 None:intergenic
TGATAAAGATATTAAAGGGG+AGG 0.623822 tig0018650:-227337 Msa1368770:CDS
ATATTAAAGGGGAGGATACG+AGG 0.624427 tig0018650:-227329 Msa1368770:CDS
GATTCACAGAAACGGCAGTA+GGG 0.625924 tig0018650:+221618 None:intergenic
TGCAAATGTGATCTTGCGAC+CGG 0.628861 tig0018650:-221667 Msa1368770:CDS
GGTACAACACTCTCCTAGCA+TGG 0.629214 tig0018650:+223702 None:intergenic
CATTGATAAAGATATTAAAG+GGG 0.630419 tig0018650:-227340 Msa1368770:CDS
TATCATCACCGAGTTCGTTG+AGG 0.631249 tig0018650:+227979 None:intergenic
TAATGGGCAGAATGCAATTG+TGG 0.631335 tig0018650:-223495 Msa1368770:CDS
AACTCCTGGACAACTACTAG+AGG 0.636159 tig0018650:-222673 Msa1368770:CDS
TCGTCAATAGATTCTGCGGG+TGG 0.637226 tig0018650:+226228 None:intergenic
GCATATTATCTGATGCAGGA+AGG 0.637268 tig0018650:-223988 Msa1368770:CDS
TCAGTACACAGGAAAGGTCG+GGG 0.637306 tig0018650:-225770 Msa1368770:CDS
GCGGTGTGCTGATTCCGGGA+CGG 0.638296 tig0018650:-223207 Msa1368770:CDS
AAAGTCAAATTCAGGAACAC+CGG 0.640672 tig0018650:-221870 Msa1368770:CDS
GTATTGTCTATGGCATATTG+TGG 0.643347 tig0018650:+226838 None:intergenic
ACGAACGAGTATACAACGGA+AGG 0.643362 tig0018650:-221968 Msa1368770:CDS
GCAGATGAAGAGAAATAGGA+TGG 0.645163 tig0018650:-226535 Msa1368770:CDS
ATCGGTACTTACTACTCCTG+TGG 0.646742 tig0018650:+224999 None:intergenic
AAGTATGGATTCAGTTACAT+CGG 0.648107 tig0018650:+224981 None:intergenic
GATGGAAAGGATTTCTGGTG+TGG 0.648670 tig0018650:-225860 Msa1368770:CDS
GTGGCTGTCAATGTGCATCT+CGG 0.649101 tig0018650:-223476 Msa1368770:CDS
TGATCTCATCGATTATGGAG+AGG 0.650177 tig0018650:-226376 Msa1368770:CDS
GAAGTGATAAGTTTAAGACT+GGG 0.651148 tig0018650:-227374 Msa1368770:CDS
TGGATGAGTGAAACTGAGAA+AGG 0.652651 tig0018650:-227258 Msa1368770:CDS
ACAAGTTCAGTACACAGGAA+AGG 0.656004 tig0018650:-225776 Msa1368770:CDS
CGAAGCACGGTTCATAACCA+AGG 0.659189 tig0018650:+223436 None:intergenic
ATCCCACAATCAAACAGCTG+AGG 0.660109 tig0018650:+224958 None:intergenic
TGTGCTGTCTTCGAATGATG+AGG 0.662109 tig0018650:-223135 Msa1368770:CDS
TGAATCAGCCGATGACATTG+TGG 0.662510 tig0018650:-221601 Msa1368770:CDS
CACATGCTAGGAAGCGAATG+GGG 0.662806 tig0018650:-226014 Msa1368770:CDS
CAGAGCTACGAACTAGAAGA+CGG 0.663373 tig0018650:-224831 Msa1368770:CDS
TGTCGCGAAGGAAATGCATG+TGG 0.663756 tig0018650:+222696 None:intergenic
ATTGATCTTCATCGTCGTCG+AGG 0.665163 tig0018650:+228015 None:intergenic
ATGATACTACAACTGTTCTG+GGG 0.665902 tig0018650:-224921 Msa1368770:CDS
TATCTGAGACGAATCACTCA+GGG 0.666324 tig0018650:+221716 None:intergenic
TCGACGGAGGGAATTACACA+TGG 0.668026 tig0018650:-226492 Msa1368770:CDS
CGTAACAGTGAGATCACCGA+AGG 0.669550 tig0018650:+227836 None:intergenic
ATTGGTGGAAGGTTCGACGG+AGG 0.669687 tig0018650:-226505 Msa1368770:CDS
ATCACCGAAGGAATCGAAAG+CGG 0.675536 tig0018650:+227848 None:intergenic
TGCTGTCTTCGAATGATGAG+GGG 0.676097 tig0018650:-223133 Msa1368770:CDS
AGATTACTAACAACCAAGAG+TGG 0.676652 tig0018650:+223956 None:intergenic
AGGCAACAAGTTCAGTACAC+AGG 0.677661 tig0018650:-225781 Msa1368770:CDS
AAAGAAGCTTAAGCTTAAAG+GGG 0.678252 tig0018650:-228156 Msa1368770:five_prime_UTR
TCGCTTGTGTTGGTTCACTG+AGG 0.682522 tig0018650:-222632 Msa1368770:CDS
GGTGATTGTGAATTTGACCA+CGG 0.685666 tig0018650:-227237 Msa1368770:CDS
TGCAGGCATCCTTCTCACTG+GGG 0.689696 tig0018650:-225084 Msa1368770:intron
GTTGGAGCAAATTTGCAAAG+TGG 0.689728 tig0018650:-223245 Msa1368770:CDS
TAATCAGAAAGTAGCCTCCG+TGG 0.691875 tig0018650:+227220 None:intergenic
ATCAGCCGATGACATTGTGG+TGG 0.700098 tig0018650:-221598 Msa1368770:CDS
CACCATTTACCACATCGGCG+TGG 0.703620 tig0018650:+226932 None:intergenic
ATCTTGCGACCGGTATCTGG+TGG 0.706820 tig0018650:-221657 Msa1368770:CDS
AACCGTGCTTCGTTGCAGCG+CGG 0.708946 tig0018650:-223425 Msa1368770:CDS
AAATGTGAAGCATTTCGTAG+GGG 0.709518 tig0018650:-226300 Msa1368770:CDS
TCTCTTTGCATCCATCCGTG+AGG 0.721646 tig0018650:-226331 Msa1368770:CDS
GTGGTGATATTATCATCGGG+CGG 0.734436 tig0018650:-223226 Msa1368770:CDS
TGGCTGAATTAAGAAGAACA+AGG 0.738169 tig0018650:-225801 Msa1368770:CDS
AGCTACGAACTAGAAGACGG+AGG 0.741616 tig0018650:-224828 Msa1368770:CDS
CACGCCGATGTGGTAAATGG+TGG 0.760187 tig0018650:-226931 Msa1368770:CDS
GGGAACGAACGAGTATACAA+CGG 0.771797 tig0018650:-221972 Msa1368770:CDS
GATTGTGAATTTGACCACGG+AGG 0.779801 tig0018650:-227234 Msa1368770:CDS
GTATTGGTCGAAGAACATGA+CGG 0.801822 tig0018650:+227929 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATATATATATTCAGTTT+TGG - tig0018650:225184-225203 Msa1368770:intron 10.0%
!! TACATTGATAAAGATATTAA+AGG - tig0018650:222225-222244 Msa1368770:intron 15.0%
!! ACATTGATAAAGATATTAAA+GGG - tig0018650:222226-222245 Msa1368770:intron 15.0%
!!! TTGTAAAATGTTTTCAAAAT+AGG - tig0018650:222757-222776 Msa1368770:CDS 15.0%
!!! TGTAAAATGTTTTCAAAATA+GGG - tig0018650:222758-222777 Msa1368770:CDS 15.0%
!!! TAAAAAAATTGCATTTTGAT+TGG - tig0018650:222806-222825 Msa1368770:CDS 15.0%
!!! AAAAAAATTGCATTTTGATT+GGG - tig0018650:222807-222826 Msa1368770:CDS 15.0%
!! TAAAACTAAATAAAATTACC+TGG - tig0018650:224014-224033 Msa1368770:CDS 15.0%
!! TAAATAAGAGATTAATTTAC+AGG + tig0018650:224240-224259 None:intergenic 15.0%
!!! TTTATTTTAATAGAAGCTTA+TGG - tig0018650:224459-224478 Msa1368770:intron 15.0%
!! TCTTATGGATAAAAAAATTT+GGG - tig0018650:226531-226550 Msa1368770:CDS 15.0%
!! TGTAATGTACAAAATAAATA+GGG + tig0018650:227555-227574 None:intergenic 15.0%
!!! TTCAATAATCAGCATTTTTT+TGG + tig0018650:221250-221269 None:intergenic 20.0%
!! AAATGAAAAATTAGGGTTTA+TGG + tig0018650:221460-221479 None:intergenic 20.0%
!! CATTGATAAAGATATTAAAG+GGG - tig0018650:222227-222246 Msa1368770:intron 20.0%
!!! AAACAATTGTGAATTTTACA+GGG + tig0018650:222483-222502 None:intergenic 20.0%
!!! TAAACAATTGTGAATTTTAC+AGG + tig0018650:222484-222503 None:intergenic 20.0%
!!! CTTTTTAATCCTTTAATGTT+CGG + tig0018650:223387-223406 None:intergenic 20.0%
!! CATTAAAGGATTAAAAAGAA+AGG - tig0018650:223389-223408 Msa1368770:CDS 20.0%
!! TAGAAGTTAAAAGTAACTTA+CGG + tig0018650:223834-223853 None:intergenic 20.0%
!! CTAGGATAAAATAATTCTAT+TGG + tig0018650:223880-223899 None:intergenic 20.0%
!!! ATTGATAGCAATATTATAAG+GGG + tig0018650:223982-224001 None:intergenic 20.0%
!!! GATTGATAGCAATATTATAA+GGG + tig0018650:223983-224002 None:intergenic 20.0%
!!! TGATTGATAGCAATATTATA+AGG + tig0018650:223984-224003 None:intergenic 20.0%
!!! ATAGTTATGTTTTAAGTATC+TGG - tig0018650:224974-224993 Msa1368770:CDS 20.0%
!! ATGTCTAACATATGATTAAA+TGG - tig0018650:225040-225059 Msa1368770:CDS 20.0%
!! GTCTTATGGATAAAAAAATT+TGG - tig0018650:226530-226549 Msa1368770:CDS 20.0%
!! AAAAAATTAGATTTCAGTTG+TGG + tig0018650:226663-226682 None:intergenic 20.0%
!! TAAAGTAAACTAAATCATGA+TGG + tig0018650:227025-227044 None:intergenic 20.0%
!!! TTTTTTAATGAATCTTGAAC+AGG + tig0018650:227081-227100 None:intergenic 20.0%
!! ACAACTTAAAATGAAACTTT+GGG + tig0018650:227510-227529 None:intergenic 20.0%
!! CTGTAATGTACAAAATAAAT+AGG + tig0018650:227556-227575 None:intergenic 20.0%
!! GAATTGTTTAAACTTATAAG+TGG - tig0018650:228241-228260 Msa1368770:intron 20.0%
! AAAAGAAGCTTAAGCTTAAA+GGG - tig0018650:221410-221429 Msa1368770:three_prime_UTR 25.0%
! GGTTGAGAAATGAAAAATTA+GGG + tig0018650:221467-221486 None:intergenic 25.0%
! TGGTTGAGAAATGAAAAATT+AGG + tig0018650:221468-221487 None:intergenic 25.0%
! TACAATCAATTCATCAATTC+TGG - tig0018650:221688-221707 Msa1368770:CDS 25.0%
! AATTTCAAATCATACTAACC+TGG + tig0018650:221951-221970 None:intergenic 25.0%
! TTAACACAAAACCATCAAAT+AGG + tig0018650:221981-222000 None:intergenic 25.0%
! AAAACACACACAAAAATCAA+AGG + tig0018650:222041-222060 None:intergenic 25.0%
!!! TATTTTGATGTTCAGATAAC+AGG - tig0018650:222128-222147 Msa1368770:intron 25.0%
! ATAAAAATCTGCAACAAAAG+CGG + tig0018650:222940-222959 None:intergenic 25.0%
! AAATAGGATGGTTGTTAAAT+TGG - tig0018650:223044-223063 Msa1368770:intron 25.0%
!! TATGTTTTTCCGAACATTAA+AGG - tig0018650:223375-223394 Msa1368770:CDS 25.0%
! AGAAGTTAAAAGTAACTTAC+GGG + tig0018650:223833-223852 None:intergenic 25.0%
! TTCACATGTATAAGTAGTTT+AGG + tig0018650:223957-223976 None:intergenic 25.0%
! TAAACTACTTATACATGTGA+AGG - tig0018650:223956-223975 Msa1368770:CDS 25.0%
! TTGTGGACTTGTAAAAAATT+TGG - tig0018650:224542-224561 Msa1368770:intron 25.0%
!! AAAGACAAAGTTTTCCTAAA+TGG - tig0018650:224672-224691 Msa1368770:intron 25.0%
!! AAGACAAAGTTTTCCTAAAT+GGG - tig0018650:224673-224692 Msa1368770:intron 25.0%
!!! AGTGCTTTAAAATATGACAA+AGG + tig0018650:224825-224844 None:intergenic 25.0%
!! TTTGTTTGAAATTTGCTTTC+TGG - tig0018650:225080-225099 Msa1368770:CDS 25.0%
!! TTGTTTGAAATTTGCTTTCT+GGG - tig0018650:225081-225100 Msa1368770:CDS 25.0%
!!! TGTTCTCTATTTCTACAAAA+AGG + tig0018650:225242-225261 None:intergenic 25.0%
! AATAGAGAACAACAAATGAA+AGG - tig0018650:225251-225270 Msa1368770:intron 25.0%
! ATAGAGAACAACAAATGAAA+GGG - tig0018650:225252-225271 Msa1368770:intron 25.0%
!! ATATTATTTTCAACAAGGGT+CGG + tig0018650:225446-225465 None:intergenic 25.0%
!! TGGCATATTATTTTCAACAA+GGG + tig0018650:225450-225469 None:intergenic 25.0%
! CAAATTTATTGCAATTACTG+TGG + tig0018650:225470-225489 None:intergenic 25.0%
! CTTGATATGTCATTCTTATT+AGG - tig0018650:225806-225825 Msa1368770:CDS 25.0%
! AAGCATCAACTCTTATATTT+GGG + tig0018650:225937-225956 None:intergenic 25.0%
!! AAAGCATCAACTCTTATATT+TGG + tig0018650:225938-225957 None:intergenic 25.0%
! CAAAGTCTGAATTCTATAAT+GGG - tig0018650:226056-226075 Msa1368770:CDS 25.0%
! ATATAATCAAGAAGATTCCT+TGG - tig0018650:226114-226133 Msa1368770:CDS 25.0%
! ATCATAATTGAAGTAGTTCT+TGG + tig0018650:226503-226522 None:intergenic 25.0%
! TGTTGTATGATAAAATTTGC+AGG - tig0018650:226720-226739 Msa1368770:intron 25.0%
! TATGATAAAATTTGCAGGTT+AGG - tig0018650:226725-226744 Msa1368770:intron 25.0%
! TGTGGATTTATAACAATATC+AGG + tig0018650:226856-226875 None:intergenic 25.0%
!! GTTTACTTTAATTGCAGTTT+TGG - tig0018650:227035-227054 Msa1368770:intron 25.0%
!! TGGTTACTTGTATTTTATGT+AGG - tig0018650:227055-227074 Msa1368770:intron 25.0%
!!! TTTACTTTAAAACCCAGTTT+GGG - tig0018650:227224-227243 Msa1368770:CDS 25.0%
!! GAATATTTTATTGTAGATCC+AGG - tig0018650:227366-227385 Msa1368770:CDS 25.0%
! TATTGAGACATGTTATTGTT+AGG + tig0018650:227440-227459 None:intergenic 25.0%
! GACAACTTAAAATGAAACTT+TGG + tig0018650:227511-227530 None:intergenic 25.0%
! TAATTCAAAAGTCTAGTCTA+GGG + tig0018650:228115-228134 None:intergenic 25.0%
! ATTAGGTGTATATATCAGTT+TGG - tig0018650:228131-228150 Msa1368770:five_prime_UTR 25.0%
! TCAAAAGAAAAGAAATGCAA+GGG + tig0018650:228223-228242 None:intergenic 25.0%
! TTCAAAAGAAAAGAAATGCA+AGG + tig0018650:228224-228243 None:intergenic 25.0%
GAAAAGAAGCTTAAGCTTAA+AGG - tig0018650:221409-221428 Msa1368770:three_prime_UTR 30.0%
AAAGAAGCTTAAGCTTAAAG+GGG - tig0018650:221411-221430 Msa1368770:three_prime_UTR 30.0%
AATTAGGGTTTATGGAGAAA+GGG + tig0018650:221452-221471 None:intergenic 30.0%
AAATTAGGGTTTATGGAGAA+AGG + tig0018650:221453-221472 None:intergenic 30.0%
! TTTTCATTTCTCAACCACAA+TGG - tig0018650:221471-221490 Msa1368770:three_prime_UTR 30.0%
!! ATTGATTGTACGAGTTGATT+TGG + tig0018650:221678-221697 None:intergenic 30.0%
AATTCGTAGTTCCTATTTGA+TGG - tig0018650:221967-221986 Msa1368770:CDS 30.0%
!!! TTGTGTGTGTTTTTGAAATG+TGG - tig0018650:222048-222067 Msa1368770:intron 30.0%
!!! TGTGTGTGTTTTTGAAATGT+GGG - tig0018650:222049-222068 Msa1368770:intron 30.0%
TCAGGTATATGTTATGAAGA+AGG - tig0018650:222167-222186 Msa1368770:intron 30.0%
! GAAGTGATAAGTTTAAGACT+GGG - tig0018650:222193-222212 Msa1368770:intron 30.0%
TGATAAAGATATTAAAGGGG+AGG - tig0018650:222230-222249 Msa1368770:intron 30.0%
ATACGAGGGAAATAACTATT+GGG - tig0018650:222253-222272 Msa1368770:intron 30.0%
!!! TTACCGATTTTGTACGTTTT+AGG - tig0018650:222430-222449 Msa1368770:intron 30.0%
!!! TACCGATTTTGTACGTTTTA+GGG - tig0018650:222431-222450 Msa1368770:intron 30.0%
AACCCTAAAACGTACAAAAT+CGG + tig0018650:222436-222455 None:intergenic 30.0%
!!! TTTAGTCCCTTTTTTGCTTT+AGG - tig0018650:222540-222559 Msa1368770:intron 30.0%
!!! TTAGTCCCTTTTTTGCTTTA+GGG - tig0018650:222541-222560 Msa1368770:intron 30.0%
TTTGTCCCTAAAGCAAAAAA+GGG + tig0018650:222549-222568 None:intergenic 30.0%
! TTTTGTCCCTAAAGCAAAAA+AGG + tig0018650:222550-222569 None:intergenic 30.0%
GATAACACTGAACAAAAAAC+AGG + tig0018650:222577-222596 None:intergenic 30.0%
! TTTTGTTCAGTGTTATCCAA+TGG - tig0018650:222580-222599 Msa1368770:CDS 30.0%
TGGTCAAAATTGCAGAAATT+TGG - tig0018650:222699-222718 Msa1368770:CDS 30.0%
GGTCAAAATTGCAGAAATTT+GGG - tig0018650:222700-222719 Msa1368770:CDS 30.0%
TACAAAAGCAGTATTGTCTA+TGG + tig0018650:222742-222761 None:intergenic 30.0%
! AAATATTTCTGAAGAGACTC+TGG - tig0018650:222971-222990 Msa1368770:intron 30.0%
! AATATTTCTGAAGAGACTCT+GGG - tig0018650:222972-222991 Msa1368770:intron 30.0%
GGTTTCAAATATTCCATACT+GGG - tig0018650:222993-223012 Msa1368770:intron 30.0%
GCAAAAAACAATATCCATAC+AGG + tig0018650:223141-223160 None:intergenic 30.0%
!!! TGGATATTGTTTTTTGCTCT+TGG - tig0018650:223144-223163 Msa1368770:CDS 30.0%
! ATTGTTGATCTCATCGATTA+TGG - tig0018650:223186-223205 Msa1368770:CDS 30.0%
! ATAAATGTGAAGCATTTCGT+AGG - tig0018650:223265-223284 Msa1368770:CDS 30.0%
! TAAATGTGAAGCATTTCGTA+GGG - tig0018650:223266-223285 Msa1368770:CDS 30.0%
AAGGATTAAAAAGAAAGGCA+AGG - tig0018650:223394-223413 Msa1368770:CDS 30.0%
TTGGAGACCATTTGTAATAA+TGG + tig0018650:223646-223665 None:intergenic 30.0%
! TCAGTACGTTCTAAATGAAA+TGG - tig0018650:224193-224212 Msa1368770:intron 30.0%
AAGTATGGATTCAGTTACAT+CGG + tig0018650:224589-224608 None:intergenic 30.0%
! AGACAAAGTTTTCCTAAATG+GGG - tig0018650:224674-224693 Msa1368770:intron 30.0%
TTCAGATTCCATATCATTTG+TGG - tig0018650:224713-224732 Msa1368770:intron 30.0%
! ACAACCTTTTTCCACTATAT+GGG + tig0018650:224873-224892 None:intergenic 30.0%
! AACAACCTTTTTCCACTATA+TGG + tig0018650:224874-224893 None:intergenic 30.0%
!! GTTTTAAGTATCTGGAAACT+TGG - tig0018650:224982-225001 Msa1368770:CDS 30.0%
TATAAACCAATCTTTGACAG+AGG + tig0018650:225170-225189 None:intergenic 30.0%
! GTGGCATATTATTTTCAACA+AGG + tig0018650:225451-225470 None:intergenic 30.0%
AAACAGAAATGGTTAACACA+AGG + tig0018650:225520-225539 None:intergenic 30.0%
TGTGTTAACCATTTCTGTTT+AGG - tig0018650:225520-225539 Msa1368770:intron 30.0%
AGTAATCTGCTCAAGATTAA+AGG - tig0018650:225626-225645 Msa1368770:intron 30.0%
CCATTATAGAATTCAGACTT+TGG + tig0018650:226058-226077 None:intergenic 30.0%
CCAAAGTCTGAATTCTATAA+TGG - tig0018650:226055-226074 Msa1368770:CDS 30.0%
CAAAGCTGAAATTGAGAATA+AGG - tig0018650:226195-226214 Msa1368770:CDS 30.0%
CCAAAATTAACAATGTCTTC+AGG + tig0018650:226244-226263 None:intergenic 30.0%
! CCTGAAGACATTGTTAATTT+TGG - tig0018650:226241-226260 Msa1368770:CDS 30.0%
GGAAAGATACAGAGTAAAAT+TGG - tig0018650:226262-226281 Msa1368770:CDS 30.0%
CAAAGTGGTGATATTATCAT+CGG - tig0018650:226337-226356 Msa1368770:CDS 30.0%
AAAGTGGTGATATTATCATC+GGG - tig0018650:226338-226357 Msa1368770:CDS 30.0%
!! TGTGCTTTAGCTTTATACTA+TGG + tig0018650:226387-226406 None:intergenic 30.0%
TTATGATGCATCTTGTCTTA+TGG - tig0018650:226516-226535 Msa1368770:CDS 30.0%
! CATACAACAGTTTTTCTTAG+CGG + tig0018650:226709-226728 None:intergenic 30.0%
AACTGAACTGAACTTTAAGT+TGG + tig0018650:227206-227225 None:intergenic 30.0%
!! GTTTACTTTAAAACCCAGTT+TGG - tig0018650:227223-227242 Msa1368770:CDS 30.0%
CAATAACATGTCTCAATATG+TGG - tig0018650:227442-227461 Msa1368770:intron 30.0%
! TATTTTGTACATTACAGAGC+TGG - tig0018650:227559-227578 Msa1368770:intron 30.0%
CTAATTCAAAAGTCTAGTCT+AGG + tig0018650:228116-228135 None:intergenic 30.0%
! CTAGACTAGACTTTTGAATT+AGG - tig0018650:228114-228133 Msa1368770:five_prime_UTR 30.0%
TGTCATAAATTACTCCTAAC+TGG + tig0018650:228178-228197 None:intergenic 30.0%
!!! CCATCATTCGTTAGTTTTTT+GGG + tig0018650:228292-228311 None:intergenic 30.0%
CCAAAAAACTAACGAATGAT+GGG - tig0018650:228290-228309 Msa1368770:intron 30.0%
! CAAAACCTTGTGAGTTTTTG+CGG + tig0018650:221310-221329 None:intergenic 35.0%
AATGTCCATTTCTGTGTAGT+TGG + tig0018650:221530-221549 None:intergenic 35.0%
TTCTTAGAAGGATCAAAACC+AGG + tig0018650:221757-221776 None:intergenic 35.0%
!! GGTTTTGATCCTTCTAAGAA+AGG - tig0018650:221757-221776 Msa1368770:CDS 35.0%
TGAACATTACCGTTATGCTA+CGG - tig0018650:221786-221805 Msa1368770:CDS 35.0%
CAAACTTAACCGTAGCATAA+CGG + tig0018650:221798-221817 None:intergenic 35.0%
GTTATGCTACGGTTAAGTTT+GGG - tig0018650:221797-221816 Msa1368770:CDS 35.0%
! CGAAGTGATAAGTTTAAGAC+TGG - tig0018650:222192-222211 Msa1368770:intron 35.0%
GATACGAGGGAAATAACTAT+TGG - tig0018650:222252-222271 Msa1368770:intron 35.0%
CAAGTAACAAAACTCATGCA+GGG + tig0018650:222515-222534 None:intergenic 35.0%
ACAAGTAACAAAACTCATGC+AGG + tig0018650:222516-222535 None:intergenic 35.0%
TAAATGGTGGTCAATATTGC+AGG - tig0018650:222649-222668 Msa1368770:CDS 35.0%
ACCACTTTGTGGTACATTTA+TGG + tig0018650:222683-222702 None:intergenic 35.0%
AATTGCAGAAATTTGGGTCT+CGG - tig0018650:222706-222725 Msa1368770:CDS 35.0%
GTATTGTCTATGGCATATTG+TGG + tig0018650:222732-222751 None:intergenic 35.0%
GGGTTTCAAATATTCCATAC+TGG - tig0018650:222992-223011 Msa1368770:intron 35.0%
TAGGATGGTTGTTAAATTGG+TGG - tig0018650:223047-223066 Msa1368770:intron 35.0%
ATGGTTGTTAAATTGGTGGA+AGG - tig0018650:223051-223070 Msa1368770:intron 35.0%
! AAATGTGAAGCATTTCGTAG+GGG - tig0018650:223267-223286 Msa1368770:CDS 35.0%
TTCTTAGAGGAACGTGTAAA+AGG - tig0018650:223306-223325 Msa1368770:CDS 35.0%
GTTCTTCTACTAGCATATAC+TGG - tig0018650:223438-223457 Msa1368770:CDS 35.0%
GACGCTTCCATTATTACAAA+TGG - tig0018650:223636-223655 Msa1368770:CDS 35.0%
ATCCTTTCAAAAGGATGGAA+AGG - tig0018650:223694-223713 Msa1368770:CDS 35.0%
! ATCCTTTCCATCCTTTTGAA+AGG + tig0018650:223699-223718 None:intergenic 35.0%
AAAAGGATGGAAAGGATTTC+TGG - tig0018650:223702-223721 Msa1368770:CDS 35.0%
AACCAATCCATTACAAACCA+TGG - tig0018650:223746-223765 Msa1368770:CDS 35.0%
! AATTCAGCCATGGTTTGTAA+TGG + tig0018650:223756-223775 None:intergenic 35.0%
TGTTCTTCTTAATTCAGCCA+TGG + tig0018650:223766-223785 None:intergenic 35.0%
TGGCTGAATTAAGAAGAACA+AGG - tig0018650:223766-223785 Msa1368770:CDS 35.0%
TACCTGGTCATTAAAACTCA+CGG - tig0018650:224030-224049 Msa1368770:intron 35.0%
TGAAATGGAAGAAACAGAGA+TGG + tig0018650:224118-224137 None:intergenic 35.0%
AGCTGATACTGAACATGAAA+TGG + tig0018650:224133-224152 None:intergenic 35.0%
ATTGTCTTAGTAGCTTCAGA+TGG - tig0018650:224334-224353 Msa1368770:intron 35.0%
TAATAGAAGCTTATGGTTGC+AGG - tig0018650:224466-224485 Msa1368770:intron 35.0%
TGATGATACTACAACTGTTC+TGG - tig0018650:224644-224663 Msa1368770:intron 35.0%
GATGATACTACAACTGTTCT+GGG - tig0018650:224645-224664 Msa1368770:intron 35.0%
ATGATACTACAACTGTTCTG+GGG - tig0018650:224646-224665 Msa1368770:intron 35.0%
GATTAAAAGTGAACCTGATG+AGG + tig0018650:224774-224793 None:intergenic 35.0%
CACTTACTTTACATGAGTCA+TGG - tig0018650:224841-224860 Msa1368770:CDS 35.0%
! AGAACCCATATAGTGGAAAA+AGG - tig0018650:224866-224885 Msa1368770:CDS 35.0%
CAATGTGAAAAGAGCAGTAT+TGG + tig0018650:225407-225426 None:intergenic 35.0%
GTTAACCATTTCTGTTTAGG+TGG - tig0018650:225523-225542 Msa1368770:intron 35.0%
GATTTCCACCTAAACAGAAA+TGG + tig0018650:225531-225550 None:intergenic 35.0%
AGATTACTAACAACCAAGAG+TGG + tig0018650:225614-225633 None:intergenic 35.0%
TAAATCTTTCCAGTCCCTAT+TGG - tig0018650:225664-225683 Msa1368770:intron 35.0%
AATCACGCCATTATCCAATA+GGG + tig0018650:225681-225700 None:intergenic 35.0%
TCAGTATTTGTTTGGCAAAG+AGG - tig0018650:225751-225770 Msa1368770:intron 35.0%
CAGTATTTGTTTGGCAAAGA+GGG - tig0018650:225752-225771 Msa1368770:intron 35.0%
GTCTTTGTGGATAAAACAGT+TGG + tig0018650:225967-225986 None:intergenic 35.0%
ACAATGACATCTGATTGTCT+TGG - tig0018650:225998-226017 Msa1368770:CDS 35.0%
TGTTCAGATCTGAGCATATA+AGG - tig0018650:226167-226186 Msa1368770:CDS 35.0%
! TGCAAATTTGCTCCAACAAA+TGG + tig0018650:226319-226338 None:intergenic 35.0%
! CTTTTGAACATAACCCCTTT+CGG + tig0018650:226410-226429 None:intergenic 35.0%
AGAACTTATCTCCAAGAACT+GGG + tig0018650:226753-226772 None:intergenic 35.0%
AATTTCCCCTTCACAAAACA+AGG - tig0018650:226823-226842 Msa1368770:intron 35.0%
!!! ACAATGCCTTGTTTTGTGAA+GGG + tig0018650:226832-226851 None:intergenic 35.0%
!!! AACAATGCCTTGTTTTGTGA+AGG + tig0018650:226833-226852 None:intergenic 35.0%
ACTGAACTGTGTCAAAAGTT+CGG + tig0018650:227147-227166 None:intergenic 35.0%
!! TGAACTGAACTTTAAGTTGG+CGG + tig0018650:227203-227222 None:intergenic 35.0%
! CTAACATGCTTTCAAGCTTT+TGG + tig0018650:227346-227365 None:intergenic 35.0%
! CAAAAGCTTGAAAGCATGTT+AGG - tig0018650:227344-227363 Msa1368770:CDS 35.0%
!! TTCAGGCTCGCTTTAAAAAT+AGG - tig0018650:227476-227495 Msa1368770:intron 35.0%
! CCTGAATTTGACTTTGTCTT+CGG + tig0018650:227692-227711 None:intergenic 35.0%
AAAGTCAAATTCAGGAACAC+CGG - tig0018650:227697-227716 Msa1368770:CDS 35.0%
GACAATAACTTTGCACCATA+TGG + tig0018650:228003-228022 None:intergenic 35.0%
! GTATATATCAGTTTGGTTCC+TGG - tig0018650:228138-228157 Msa1368770:five_prime_UTR 35.0%
ATGTTTCCTTGATACCAGTT+AGG - tig0018650:228161-228180 Msa1368770:five_prime_UTR 35.0%
ATTACTCCTAACTGGTATCA+AGG + tig0018650:228170-228189 None:intergenic 35.0%
ATAAGTGGAATGCTCATATC+CGG - tig0018650:228256-228275 Msa1368770:intron 35.0%
!!! ATTCGTTAGTTTTTTGGGAG+AGG + tig0018650:228287-228306 None:intergenic 35.0%
CCCAAAAAACTAACGAATGA+TGG - tig0018650:228289-228308 Msa1368770:intron 35.0%
!!! CCCATCATTCGTTAGTTTTT+TGG + tig0018650:228293-228312 None:intergenic 35.0%
CATTTCCGCAAAAACTCACA+AGG - tig0018650:221302-221321 Msa1368770:three_prime_UTR 40.0%
! CGCAAAAACTCACAAGGTTT+TGG - tig0018650:221308-221327 Msa1368770:three_prime_UTR 40.0%
! GGTTTATGGAGAAAGGGTTT+TGG + tig0018650:221446-221465 None:intergenic 40.0%
TCAACCACAATGGAACACAT+AGG - tig0018650:221481-221500 Msa1368770:three_prime_UTR 40.0%
TGAACCTATGTGTTCCATTG+TGG + tig0018650:221488-221507 None:intergenic 40.0%
CAACACCAACTACACAGAAA+TGG - tig0018650:221522-221541 Msa1368770:CDS 40.0%
! GTATTGGTCGAAGAACATGA+CGG + tig0018650:221641-221660 None:intergenic 40.0%
GTCATGTTCTTCGACCAATA+CGG - tig0018650:221640-221659 Msa1368770:CDS 40.0%
GGTGACTGATTAAACCGTAT+TGG + tig0018650:221657-221676 None:intergenic 40.0%
TCATCAGCACCTTTCTTAGA+AGG + tig0018650:221769-221788 None:intergenic 40.0%
CGTTATGCTACGGTTAAGTT+TGG - tig0018650:221796-221815 Msa1368770:CDS 40.0%
!! CTAAGTTTTGGTGTGGTGAA+GGG - tig0018650:221839-221858 Msa1368770:CDS 40.0%
!! GAAAGTTGATGTTCACATCC+AGG - tig0018650:221930-221949 Msa1368770:CDS 40.0%
GGACTGTGTGTGTTAATTTC+AGG - tig0018650:222149-222168 Msa1368770:intron 40.0%
ATATTAAAGGGGAGGATACG+AGG - tig0018650:222238-222257 Msa1368770:intron 40.0%
TATTAAAGGGGAGGATACGA+GGG - tig0018650:222239-222258 Msa1368770:intron 40.0%
AGATCAGACTTGACCATAAC+AGG + tig0018650:222285-222304 None:intergenic 40.0%
TGGATGAGTGAAACTGAGAA+AGG - tig0018650:222309-222328 Msa1368770:intron 40.0%
GGTGATTGTGAATTTGACCA+CGG - tig0018650:222330-222349 Msa1368770:intron 40.0%
! GGAGGCTACTTTCTGATTAA+GGG - tig0018650:222351-222370 Msa1368770:intron 40.0%
!! TCTGATTAAGGGTGCTGAAA+AGG - tig0018650:222362-222381 Msa1368770:intron 40.0%
GTGTTATCCAATGGCAGTTA+TGG - tig0018650:222589-222608 Msa1368770:CDS 40.0%
TTGACCACCATTTACCACAT+CGG + tig0018650:222643-222662 None:intergenic 40.0%
GCCATAAATGTACCACAAAG+TGG - tig0018650:222679-222698 Msa1368770:CDS 40.0%
!! CTGCAATTTTGACCACTTTG+TGG + tig0018650:222694-222713 None:intergenic 40.0%
AATGCGCTGCGTTAAAATGT+AGG + tig0018650:222850-222869 None:intergenic 40.0%
AGTCGCAGATGAAGAGAAAT+AGG - tig0018650:223028-223047 Msa1368770:intron 40.0%
GCAGATGAAGAGAAATAGGA+TGG - tig0018650:223032-223051 Msa1368770:intron 40.0%
TAAATTGGTGGAAGGTTCGA+CGG - tig0018650:223059-223078 Msa1368770:intron 40.0%
! TGATCTCATCGATTATGGAG+AGG - tig0018650:223191-223210 Msa1368770:CDS 40.0%
! GAACGCTCTTCTTTTCTTAG+AGG - tig0018650:223293-223312 Msa1368770:CDS 40.0%
! GTATCTAGCTTACATGGTGA+AGG - tig0018650:223416-223435 Msa1368770:CDS 40.0%
!! CCCTGTTATCAGTTTTTCGA+CGG + tig0018650:223464-223483 None:intergenic 40.0%
CCGTCGAAAAACTGATAACA+GGG - tig0018650:223461-223480 Msa1368770:CDS 40.0%
GAACTTCTCGTTCTCCATAA+AGG + tig0018650:223596-223615 None:intergenic 40.0%
CTTGGACACATCCTTTCAAA+AGG - tig0018650:223685-223704 Msa1368770:CDS 40.0%
GACACATCCTTTCAAAAGGA+TGG - tig0018650:223689-223708 Msa1368770:CDS 40.0%
!! AGCCATGGTTTGTAATGGAT+TGG + tig0018650:223751-223770 None:intergenic 40.0%
ACAAGTTCAGTACACAGGAA+AGG - tig0018650:223791-223810 Msa1368770:CDS 40.0%
TATCCTAGCTGACTGAATGA+AGG - tig0018650:223892-223911 Msa1368770:CDS 40.0%
TAACCTTCATTCAGTCAGCT+AGG + tig0018650:223898-223917 None:intergenic 40.0%
!! AACCGTGAGTTTTAATGACC+AGG + tig0018650:224035-224054 None:intergenic 40.0%
! GACTAGATGCCGAGTTTTTA+TGG - tig0018650:224089-224108 Msa1368770:intron 40.0%
! TAGATGCCGAGTTTTTATGG+TGG - tig0018650:224092-224111 Msa1368770:intron 40.0%
AGATGGCCACCATAAAAACT+CGG + tig0018650:224101-224120 None:intergenic 40.0%
CATTTACATCCCCTCAATGA+AGG + tig0018650:224167-224186 None:intergenic 40.0%
GATCAATCCCTGAAAAGGTT+GGG + tig0018650:224303-224322 None:intergenic 40.0%
AGATCAATCCCTGAAAAGGT+TGG + tig0018650:224304-224323 None:intergenic 40.0%
GACTAGATCAATCCCTGAAA+AGG + tig0018650:224308-224327 None:intergenic 40.0%
! TCCACAATTTTCACCATCTG+GGG + tig0018650:224529-224548 None:intergenic 40.0%
! GTCCACAATTTTCACCATCT+GGG + tig0018650:224530-224549 None:intergenic 40.0%
! AGTCCACAATTTTCACCATC+TGG + tig0018650:224531-224550 None:intergenic 40.0%
GTAAAAAATTTGGCTGCCAC+AGG - tig0018650:224552-224571 Msa1368770:intron 40.0%
ATCAAACAGCTGAGGAAGTA+TGG + tig0018650:224604-224623 None:intergenic 40.0%
TTCCTCAGCTGTTTGATTGT+GGG - tig0018650:224607-224626 Msa1368770:intron 40.0%
! AAGTTTTCCTAAATGGGGAC+TGG - tig0018650:224679-224698 Msa1368770:intron 40.0%
! AGTTTTCCTAAATGGGGACT+GGG - tig0018650:224680-224699 Msa1368770:intron 40.0%
! TAGCTCTGCCACAAATGATA+TGG + tig0018650:224724-224743 None:intergenic 40.0%
AGGTAGTGTACATAGAGACA+TGG + tig0018650:225116-225135 None:intergenic 40.0%
CACTTCACTATTCTAGTGCA+AGG + tig0018650:225358-225377 None:intergenic 40.0%
GCATATTATCTGATGCAGGA+AGG - tig0018650:225579-225598 Msa1368770:intron 40.0%
TACTAACAACCAAGAGTGGA+CGG + tig0018650:225610-225629 None:intergenic 40.0%
TTCCAGTCCCTATTGGATAA+TGG - tig0018650:225671-225690 Msa1368770:intron 40.0%
CAATCACGCCATTATCCAAT+AGG + tig0018650:225682-225701 None:intergenic 40.0%
TTGAAGTCCTCTTCTTCTTC+AGG + tig0018650:225716-225735 None:intergenic 40.0%
! TGGGGTGTTCAGTATTTGTT+TGG - tig0018650:225743-225762 Msa1368770:intron 40.0%
! GCATGGTCATGATTTGCAAA+TGG + tig0018650:225851-225870 None:intergenic 40.0%
TTGCAAATCATGACCATGCT+AGG - tig0018650:225852-225871 Msa1368770:CDS 40.0%
AAGCATTCTTCTCAGGCTAT+TGG - tig0018650:225896-225915 Msa1368770:CDS 40.0%
GATGTCATTGTCTGAAAGAG+TGG + tig0018650:225989-226008 None:intergenic 40.0%
TCTGATTGTCTTGGAAAACC+TGG - tig0018650:226007-226026 Msa1368770:CDS 40.0%
CTTGGAAAACCTGGATATCT+TGG - tig0018650:226016-226035 Msa1368770:CDS 40.0%
TTACTCTGACCAAGATATCC+AGG + tig0018650:226028-226047 None:intergenic 40.0%
! TAATGGGCAGAATGCAATTG+TGG - tig0018650:226072-226091 Msa1368770:CDS 40.0%
CATCATCAAGGCTATCAACT+CGG + tig0018650:226288-226307 None:intergenic 40.0%
!! GTTGATAGCCTTGATGATGA+TGG - tig0018650:226289-226308 Msa1368770:CDS 40.0%
ATGGAAAGCCATCATCATCA+AGG + tig0018650:226300-226319 None:intergenic 40.0%
! GATGATGGCTTTCCATTTGT+TGG - tig0018650:226304-226323 Msa1368770:CDS 40.0%
GTTGGAGCAAATTTGCAAAG+TGG - tig0018650:226322-226341 Msa1368770:CDS 40.0%
TAAAGCTAAAGCACACCGAA+AGG - tig0018650:226392-226411 Msa1368770:CDS 40.0%
AAAGCTAAAGCACACCGAAA+GGG - tig0018650:226393-226412 Msa1368770:CDS 40.0%
CGAAAGGGGTTATGTTCAAA+AGG - tig0018650:226408-226427 Msa1368770:CDS 40.0%
GTTTGTTCGTAATCTGCACA+TGG - tig0018650:226622-226641 Msa1368770:intron 40.0%
AGCGGTCAAATACAACTTAG+AGG + tig0018650:226691-226710 None:intergenic 40.0%
GAGAACTTATCTCCAAGAAC+TGG + tig0018650:226754-226773 None:intergenic 40.0%
GATAAGTTCTCCAGTATGCA+TGG - tig0018650:226763-226782 Msa1368770:intron 40.0%
!!! CAATGCCTTGTTTTGTGAAG+GGG + tig0018650:226831-226850 None:intergenic 40.0%
TGGAAGATTACCTATGAAGC+TGG + tig0018650:227005-227024 None:intergenic 40.0%
TTCAAGCTCTTTCCCAAACT+GGG + tig0018650:227239-227258 None:intergenic 40.0%
TTTCAAGCTCTTTCCCAAAC+TGG + tig0018650:227240-227259 None:intergenic 40.0%
TGGGAAAGAGCTTGAAATAC+CGG - tig0018650:227243-227262 Msa1368770:CDS 40.0%
ACGCTAGCACTATTAAGCAT+CGG + tig0018650:227272-227291 None:intergenic 40.0%
! ATGTGGATTGCATTAGCTTC+AGG - tig0018650:227459-227478 Msa1368770:intron 40.0%
GTCCGATCGCTGATATTTAT+GGG - tig0018650:227634-227653 Msa1368770:intron 40.0%
CCGAAGACAAAGTCAAATTC+AGG - tig0018650:227689-227708 Msa1368770:CDS 40.0%
!! CGATTTGGAGGTATCAAGTT+TGG - tig0018650:227763-227782 Msa1368770:CDS 40.0%
! AGGTATCAAGTTTGGTGAGA+TGG - tig0018650:227771-227790 Msa1368770:CDS 40.0%
! TATCTGAGACGAATCACTCA+GGG + tig0018650:227854-227873 None:intergenic 40.0%
TGGTGCAAAGTTATTGTCTC+AGG - tig0018650:228005-228024 Msa1368770:CDS 40.0%
!! AAAGAAATGCAAGGGCATTC+AGG + tig0018650:228215-228234 None:intergenic 40.0%
TAAGTGGAATGCTCATATCC+GGG - tig0018650:228257-228276 Msa1368770:intron 40.0%
ATTGATCTTCATCGTCGTCG+AGG + tig0018650:221555-221574 None:intergenic 45.0%
ACCGAGTTCGTTGAGGATTT+CGG + tig0018650:221584-221603 None:intergenic 45.0%
TATCATCACCGAGTTCGTTG+AGG + tig0018650:221591-221610 None:intergenic 45.0%
! CAACGAACTCGGTGATGATA+TGG - tig0018650:221591-221610 Msa1368770:CDS 45.0%
ATCACCGAAGGAATCGAAAG+CGG + tig0018650:221722-221741 None:intergenic 45.0%
TGCTACGGTTAAGTTTGGGA+AGG - tig0018650:221801-221820 Msa1368770:CDS 45.0%
CCTTCACCACACCAAAACTT+AGG + tig0018650:221841-221860 None:intergenic 45.0%
!! CCTAAGTTTTGGTGTGGTGA+AGG - tig0018650:221838-221857 Msa1368770:CDS 45.0%
ATAAGTCATCCTCTGCAACC+TGG + tig0018650:221899-221918 None:intergenic 45.0%
TATTGGGAGACTGCCTGTTA+TGG - tig0018650:222269-222288 Msa1368770:intron 45.0%
TGGTCAAGTCTGATCTGTGT+TGG - tig0018650:222289-222308 Msa1368770:intron 45.0%
GATTGTGAATTTGACCACGG+AGG - tig0018650:222333-222352 Msa1368770:intron 45.0%
TAATCAGAAAGTAGCCTCCG+TGG + tig0018650:222350-222369 None:intergenic 45.0%
! CGGAGGCTACTTTCTGATTA+AGG - tig0018650:222350-222369 Msa1368770:intron 45.0%
GGTCAAAATCTGCCACCAAT+AGG + tig0018650:222617-222636 None:intergenic 45.0%
TTGAAAGCAACAGCCCAGTA+TGG + tig0018650:223009-223028 None:intergenic 45.0%
TGTCTGTCGAGATACCTGTA+TGG - tig0018650:223124-223143 Msa1368770:CDS 45.0%
ATCGATTATGGAGAGGCAGA+TGG - tig0018650:223198-223217 Msa1368770:CDS 45.0%
CACATTTATCGTCTGCCTCA+CGG + tig0018650:223254-223273 None:intergenic 45.0%
CACTCGTCAATAGATTCTGC+GGG + tig0018650:223345-223364 None:intergenic 45.0%
GCACTCGTCAATAGATTCTG+CGG + tig0018650:223346-223365 None:intergenic 45.0%
! GGCAAGGTATCTAGCTTACA+TGG - tig0018650:223410-223429 Msa1368770:CDS 45.0%
GCCGTCGAAAAACTGATAAC+AGG - tig0018650:223460-223479 Msa1368770:CDS 45.0%
! GGGACGATTTTCGAAACAAG+AGG - tig0018650:223481-223500 Msa1368770:CDS 45.0%
AACAAGAGGCTTGAGTTAGC+TGG - tig0018650:223495-223514 Msa1368770:CDS 45.0%
AAGTGCACTTTGCACATGCT+AGG - tig0018650:223541-223560 Msa1368770:CDS 45.0%
TCCATAAAGGTCTCTCTGCA+GGG + tig0018650:223583-223602 None:intergenic 45.0%
!!! CTCCAAAGAGCGTTTTCTAC+TGG - tig0018650:223660-223679 Msa1368770:CDS 45.0%
CTCCAGTAGAAAACGCTCTT+TGG + tig0018650:223665-223684 None:intergenic 45.0%
!! GATGGAAAGGATTTCTGGTG+TGG - tig0018650:223707-223726 Msa1368770:CDS 45.0%
AGGCAACAAGTTCAGTACAC+AGG - tig0018650:223786-223805 Msa1368770:CDS 45.0%
GTTCAGTACACAGGAAAGGT+CGG - tig0018650:223795-223814 Msa1368770:CDS 45.0%
TTCAGTACACAGGAAAGGTC+GGG - tig0018650:223796-223815 Msa1368770:CDS 45.0%
TCTGTAATGCGCCTTCATTG+AGG - tig0018650:224153-224172 Msa1368770:intron 45.0%
CTGTAATGCGCCTTCATTGA+GGG - tig0018650:224154-224173 Msa1368770:intron 45.0%
TGTAATGCGCCTTCATTGAG+GGG - tig0018650:224155-224174 Msa1368770:intron 45.0%
! ATCAACGTCCCAACCTTTTC+AGG - tig0018650:224292-224311 Msa1368770:intron 45.0%
! TCAACGTCCCAACCTTTTCA+GGG - tig0018650:224293-224312 Msa1368770:intron 45.0%
TCAGGGATTGATCTAGTCTC+TGG - tig0018650:224310-224329 Msa1368770:intron 45.0%
! TGTTTTCTTTCCACCCCAGA+TGG - tig0018650:224513-224532 Msa1368770:intron 45.0%
! ACAATTTTCACCATCTGGGG+TGG + tig0018650:224526-224545 None:intergenic 45.0%
ACCCCAGATGGTGAAAATTG+TGG - tig0018650:224525-224544 Msa1368770:intron 45.0%
ATCGGTACTTACTACTCCTG+TGG + tig0018650:224571-224590 None:intergenic 45.0%
CTTCCTCAGCTGTTTGATTG+TGG - tig0018650:224606-224625 Msa1368770:intron 45.0%
ATCCCACAATCAAACAGCTG+AGG + tig0018650:224612-224631 None:intergenic 45.0%
TCAGCTGTTTGATTGTGGGA+TGG - tig0018650:224611-224630 Msa1368770:intron 45.0%
CAGAGCTACGAACTAGAAGA+CGG - tig0018650:224736-224755 Msa1368770:intron 45.0%
CATGGAGAGAACCCATATAG+TGG - tig0018650:224859-224878 Msa1368770:CDS 45.0%
! TAAGTGACAGCGTTTTGCAG+AGG + tig0018650:225136-225155 None:intergenic 45.0%
CCAATCTTTGACAGAGGAGA+GGG + tig0018650:225164-225183 None:intergenic 45.0%
ACCAATCTTTGACAGAGGAG+AGG + tig0018650:225165-225184 None:intergenic 45.0%
ACAACTCACAAGGGGAAAGT+GGG + tig0018650:225333-225352 None:intergenic 45.0%
TGCAAGGTCACAACTCACAA+GGG + tig0018650:225342-225361 None:intergenic 45.0%
GTGCGCATATTATCTGATGC+AGG - tig0018650:225575-225594 Msa1368770:intron 45.0%
AATGGCGTGATTGAGCTGAT+TGG - tig0018650:225689-225708 Msa1368770:intron 45.0%
! GATTGGTCCTGAAGAAGAAG+AGG - tig0018650:225706-225725 Msa1368770:intron 45.0%
AAGAGGACTTCAAGACTGCT+TGG - tig0018650:225723-225742 Msa1368770:intron 45.0%
AGAGGACTTCAAGACTGCTT+GGG - tig0018650:225724-225743 Msa1368770:intron 45.0%
!! GAGAAGAATGCTTCTGGGAT+TGG + tig0018650:225889-225908 None:intergenic 45.0%
!! ATCCCAGAAGCATTCTTCTC+AGG - tig0018650:225889-225908 Msa1368770:CDS 45.0%
AGCCTGAGAAGAATGCTTCT+GGG + tig0018650:225894-225913 None:intergenic 45.0%
TAGCCTGAGAAGAATGCTTC+TGG + tig0018650:225895-225914 None:intergenic 45.0%
GTCTGAAAGAGTGGTCTTTG+TGG + tig0018650:225980-225999 None:intergenic 45.0%
GTGGTGATATTATCATCGGG+CGG - tig0018650:226341-226360 Msa1368770:CDS 45.0%
CTTTATACTATGGTCCGTCC+CGG + tig0018650:226377-226396 None:intergenic 45.0%
AAGCTAAAGCACACCGAAAG+GGG - tig0018650:226394-226413 Msa1368770:CDS 45.0%
TGTGCTGTCTTCGAATGATG+AGG - tig0018650:226432-226451 Msa1368770:CDS 45.0%
GTGCTGTCTTCGAATGATGA+GGG - tig0018650:226433-226452 Msa1368770:CDS 45.0%
TGCTGTCTTCGAATGATGAG+GGG - tig0018650:226434-226453 Msa1368770:CDS 45.0%
TCCAGTATGCATGGACAGAA+GGG - tig0018650:226772-226791 Msa1368770:intron 45.0%
!!! CATGGACAGAAGGGTGTTTT+GGG - tig0018650:226781-226800 Msa1368770:intron 45.0%
!!! GAAGGGTGTTTTGGGATTTC+TGG - tig0018650:226789-226808 Msa1368770:intron 45.0%
!! TTTGGGATTTCTGGAGTCTC+AGG - tig0018650:226798-226817 Msa1368770:intron 45.0%
AACTCCTGGACAACTACTAG+AGG - tig0018650:226894-226913 Msa1368770:CDS 45.0%
ACAACTACTAGAGGCTGCTT+TGG - tig0018650:226903-226922 Msa1368770:CDS 45.0%
! CAACTACTAGAGGCTGCTTT+GGG - tig0018650:226904-226923 Msa1368770:CDS 45.0%
TCAACAGAGGAAGTGGAGAA+AGG + tig0018650:226970-226989 None:intergenic 45.0%
AATGGCTTCAACAGAGGAAG+TGG + tig0018650:226977-226996 None:intergenic 45.0%
GTCAGTAATGGCTTCAACAG+AGG + tig0018650:226983-227002 None:intergenic 45.0%
CCTATGAAGCTGGTCAGTAA+TGG + tig0018650:226995-227014 None:intergenic 45.0%
CCATTACTGACCAGCTTCAT+AGG - tig0018650:226992-227011 Msa1368770:intron 45.0%
GATCAGTGCAGTGCATAGTT+CGG + tig0018650:227109-227128 None:intergenic 45.0%
! AGTTCGGCTCTTTTCCAGTT+CGG + tig0018650:227131-227150 None:intergenic 45.0%
!! CACTATTAAGCATCGGTCAC+CGG + tig0018650:227265-227284 None:intergenic 45.0%
! GGAACTGGAAAGAGCATGTT+AGG - tig0018650:227406-227425 Msa1368770:intron 45.0%
!!! ACAGAGCTGGCTTTTCAAGA+TGG - tig0018650:227572-227591 Msa1368770:intron 45.0%
!!! CAGAGCTGGCTTTTCAAGAT+GGG - tig0018650:227573-227592 Msa1368770:intron 45.0%
!!! AGAGCTGGCTTTTCAAGATG+GGG - tig0018650:227574-227593 Msa1368770:intron 45.0%
GGGAACGAACGAGTATACAA+CGG - tig0018650:227595-227614 Msa1368770:intron 45.0%
ACGAACGAGTATACAACGGA+AGG - tig0018650:227599-227618 Msa1368770:intron 45.0%
GGTCCGATCGCTGATATTTA+TGG - tig0018650:227633-227652 Msa1368770:intron 45.0%
GGCCCATAAATATCAGCGAT+CGG + tig0018650:227639-227658 None:intergenic 45.0%
GCAGTCTCTGGTAGAATGTT+GGG + tig0018650:227660-227679 None:intergenic 45.0%
TGCAGTCTCTGGTAGAATGT+TGG + tig0018650:227661-227680 None:intergenic 45.0%
TGACTTTGTCTTCGGACATG+TGG + tig0018650:227684-227703 None:intergenic 45.0%
! GTATCTGAGACGAATCACTC+AGG + tig0018650:227855-227874 None:intergenic 45.0%
TGCAAATGTGATCTTGCGAC+CGG - tig0018650:227900-227919 Msa1368770:CDS 45.0%
GATTCACAGAAACGGCAGTA+GGG + tig0018650:227952-227971 None:intergenic 45.0%
TGATTCACAGAAACGGCAGT+AGG + tig0018650:227953-227972 None:intergenic 45.0%
! CATCGGCTGATTCACAGAAA+CGG + tig0018650:227960-227979 None:intergenic 45.0%
TGAATCAGCCGATGACATTG+TGG - tig0018650:227966-227985 Msa1368770:CDS 45.0%
CTTTGCACCATATGGAACAC+TGG + tig0018650:227995-228014 None:intergenic 45.0%
CTGGTATCAAGGAAACATCC+AGG + tig0018650:228159-228178 None:intergenic 45.0%
GAGTGAGAGTGAGAGTGAGT+GGG + tig0018650:221379-221398 None:intergenic 50.0%
TGAGTGAGAGTGAGAGTGAG+TGG + tig0018650:221380-221399 None:intergenic 50.0%
TTCGTTGAGGATTTCGGCGT+TGG + tig0018650:221578-221597 None:intergenic 50.0%
GCCGAAATCCTCAACGAACT+CGG - tig0018650:221580-221599 Msa1368770:CDS 50.0%
! CAAGCCGCTTTCGATTCCTT+CGG - tig0018650:221715-221734 Msa1368770:CDS 50.0%
CGTAACAGTGAGATCACCGA+AGG + tig0018650:221734-221753 None:intergenic 50.0%
! CGCTTGAGCGACCTAAGTTT+TGG - tig0018650:221827-221846 Msa1368770:CDS 50.0%
!! GAGCGACCTAAGTTTTGGTG+TGG - tig0018650:221832-221851 Msa1368770:CDS 50.0%
ATAGGCGCCATAACTGCCAT+TGG + tig0018650:222599-222618 None:intergenic 50.0%
ATGGCAGTTATGGCGCCTAT+TGG - tig0018650:222599-222618 Msa1368770:CDS 50.0%
!! AGATTTTGACCACGCCGATG+TGG - tig0018650:222626-222645 Msa1368770:CDS 50.0%
TCGACGGAGGGAATTACACA+TGG - tig0018650:223075-223094 Msa1368770:intron 50.0%
TCTCTTTGCATCCATCCGTG+AGG - tig0018650:223236-223255 Msa1368770:CDS 50.0%
TTTATCGTCTGCCTCACGGA+TGG + tig0018650:223250-223269 None:intergenic 50.0%
TCGTCAATAGATTCTGCGGG+TGG + tig0018650:223342-223361 None:intergenic 50.0%
TGCACATGCTAGGAAGCGAA+TGG - tig0018650:223551-223570 Msa1368770:CDS 50.0%
GCACATGCTAGGAAGCGAAT+GGG - tig0018650:223552-223571 Msa1368770:CDS 50.0%
CACATGCTAGGAAGCGAATG+GGG - tig0018650:223553-223572 Msa1368770:CDS 50.0%
CTCCATAAAGGTCTCTCTGC+AGG + tig0018650:223584-223603 None:intergenic 50.0%
! GAGCGTTTTCTACTGGAGCT+TGG - tig0018650:223667-223686 Msa1368770:CDS 50.0%
TCTGGTGTGGTTGCAACTCT+TGG - tig0018650:223720-223739 Msa1368770:CDS 50.0%
CTGGTGTGGTTGCAACTCTT+GGG - tig0018650:223721-223740 Msa1368770:CDS 50.0%
TCAGTACACAGGAAAGGTCG+GGG - tig0018650:223797-223816 Msa1368770:CDS 50.0%
ACTCGGCATCTAGTCTACAC+AGG + tig0018650:224084-224103 None:intergenic 50.0%
TTGCAGGCATCCTTCTCACT+GGG - tig0018650:224482-224501 Msa1368770:intron 50.0%
CAAACCTTACCCCAGTGAGA+AGG + tig0018650:224495-224514 None:intergenic 50.0%
TTCCTAAATGGGGACTGGGT+CGG - tig0018650:224684-224703 Msa1368770:intron 50.0%
AGCTACGAACTAGAAGACGG+AGG - tig0018650:224739-224758 Msa1368770:intron 50.0%
GAGGAATGAGTTGCCTCATC+AGG - tig0018650:224758-224777 Msa1368770:intron 50.0%
CCCTCTCCTCTGTCAAAGAT+TGG - tig0018650:225161-225180 Msa1368770:intron 50.0%
CACAACTCACAAGGGGAAAG+TGG + tig0018650:225334-225353 None:intergenic 50.0%
GCAAGGTCACAACTCACAAG+GGG + tig0018650:225341-225360 None:intergenic 50.0%
GTGCAAGGTCACAACTCACA+AGG + tig0018650:225343-225362 None:intergenic 50.0%
AAGGATTCTCCGTCCACTCT+TGG - tig0018650:225598-225617 Msa1368770:intron 50.0%
CGCCATTATCCAATAGGGAC+TGG + tig0018650:225676-225695 None:intergenic 50.0%
GAGGACTTCAAGACTGCTTG+GGG - tig0018650:225725-225744 Msa1368770:intron 50.0%
GGTACAACACTCTCCTAGCA+TGG + tig0018650:225868-225887 None:intergenic 50.0%
GTGGCTGTCAATGTGCATCT+CGG - tig0018650:226091-226110 Msa1368770:CDS 50.0%
CGAAGCACGGTTCATAACCA+AGG + tig0018650:226134-226153 None:intergenic 50.0%
!! TGCTGTTGTTTCGCTGAGAC+AGG - tig0018650:226465-226484 Msa1368770:CDS 50.0%
CTCCAGTATGCATGGACAGA+AGG - tig0018650:226771-226790 Msa1368770:intron 50.0%
ACCCTTCTGTCCATGCATAC+TGG + tig0018650:226776-226795 None:intergenic 50.0%
!!! GCATGGACAGAAGGGTGTTT+TGG - tig0018650:226780-226799 Msa1368770:intron 50.0%
TGTCGCGAAGGAAATGCATG+TGG + tig0018650:226874-226893 None:intergenic 50.0%
TTTCCTTCGCGACAAACTCC+TGG - tig0018650:226880-226899 Msa1368770:CDS 50.0%
!! ACTAGAGGCTGCTTTGGGAA+AGG - tig0018650:226909-226928 Msa1368770:CDS 50.0%
!! CTAGAGGCTGCTTTGGGAAA+GGG - tig0018650:226910-226929 Msa1368770:CDS 50.0%
!! TCGCTTGTGTTGGTTCACTG+AGG - tig0018650:226935-226954 Msa1368770:CDS 50.0%
CTCAATCGCGTCTCATTGCT+AGG - tig0018650:227318-227337 Msa1368770:CDS 50.0%
!!! GAGCTGGCTTTTCAAGATGG+GGG - tig0018650:227575-227594 Msa1368770:intron 50.0%
CGAGTATACAACGGAAGGAC+CGG - tig0018650:227604-227623 Msa1368770:intron 50.0%
CGTGATTGCCTGATAGCTCA+TGG - tig0018650:227796-227815 Msa1368770:CDS 50.0%
! CTGAAGCACCATGAGCTATC+AGG + tig0018650:227807-227826 None:intergenic 50.0%
ACGAATCACTCAGGGTGAAG+AGG + tig0018650:227846-227865 None:intergenic 50.0%
AGTAGGGACCTCGAATCTTC+CGG + tig0018650:227936-227955 None:intergenic 50.0%
ATCAGCCGATGACATTGTGG+TGG - tig0018650:227969-227988 Msa1368770:CDS 50.0%
ACTGGCCACCACAATGTCAT+CGG + tig0018650:227977-227996 None:intergenic 50.0%
TCTCAGGAGCTGTTCAGCAT+GGG - tig0018650:228021-228040 Msa1368770:CDS 50.0%
!! CAAGGGCATTCAGGCAAATC+AGG + tig0018650:228206-228225 None:intergenic 50.0%
!!! TTTTTTGGGAGAGGAGCTCC+CGG + tig0018650:228278-228297 None:intergenic 50.0%
GGTGATCTCACTGTTACGCC+TGG - tig0018650:221736-221755 Msa1368770:CDS 55.0%
AGATGCTTCCCAGACATGCC+AGG - tig0018650:221878-221897 Msa1368770:CDS 55.0%
CTCTGCAACCTGGCATGTCT+GGG + tig0018650:221889-221908 None:intergenic 55.0%
GCAGTTATGGCGCCTATTGG+TGG - tig0018650:222602-222621 Msa1368770:CDS 55.0%
GACCACGCCGATGTGGTAAA+TGG - tig0018650:222633-222652 Msa1368770:CDS 55.0%
CACCATTTACCACATCGGCG+TGG + tig0018650:222638-222657 None:intergenic 55.0%
CACGCCGATGTGGTAAATGG+TGG - tig0018650:222636-222655 Msa1368770:CDS 55.0%
ATTGGTGGAAGGTTCGACGG+AGG - tig0018650:223062-223081 Msa1368770:intron 55.0%
TTGGTGGAAGGTTCGACGGA+GGG - tig0018650:223063-223082 Msa1368770:intron 55.0%
TGAGTTAGCTGGTGAGCTGC+TGG - tig0018650:223506-223525 Msa1368770:CDS 55.0%
TGCTAGGAAGCGAATGGGGA+AGG - tig0018650:223557-223576 Msa1368770:CDS 55.0%
GCCCTGCAGAGAGACCTTTA+TGG - tig0018650:223579-223598 Msa1368770:CDS 55.0%
GTTGCAGGCATCCTTCTCAC+TGG - tig0018650:224481-224500 Msa1368770:intron 55.0%
TGCAGGCATCCTTCTCACTG+GGG - tig0018650:224483-224502 Msa1368770:intron 55.0%
GCATCCTTCTCACTGGGGTA+AGG - tig0018650:224488-224507 Msa1368770:intron 55.0%
CAGGTTAGGAGCCCAGTTCT+TGG - tig0018650:226739-226758 Msa1368770:intron 55.0%
TGTCCAGGAGTTTGTCGCGA+AGG + tig0018650:226886-226905 None:intergenic 55.0%
GCAGCCTCTAGTAGTTGTCC+AGG + tig0018650:226901-226920 None:intergenic 55.0%
!! GGAAAGGGCATCGCTTGTGT+TGG - tig0018650:226925-226944 Msa1368770:CDS 55.0%
! TGCACTGCACTGATCCGAAC+TGG - tig0018650:227114-227133 Msa1368770:intron 55.0%
GTAGATCCAGGCTCGCTTTC+AGG - tig0018650:227378-227397 Msa1368770:CDS 55.0%
CAGGCTCGCTTTCAGGCTTT+CGG - tig0018650:227385-227404 Msa1368770:CDS 55.0%
CGCTTTCAGGCTTTCGGAAC+TGG - tig0018650:227391-227410 Msa1368770:CDS 55.0%
AATCGCTTCCTGTCAGCGAC+AGG + tig0018650:227748-227767 None:intergenic 55.0%
GTCGCTGACAGGAAGCGATT+TGG - tig0018650:227748-227767 Msa1368770:CDS 55.0%
! GCTGACAGGAAGCGATTTGG+AGG - tig0018650:227751-227770 Msa1368770:CDS 55.0%
GTGATCTTGCGACCGGTATC+TGG - tig0018650:227907-227926 Msa1368770:CDS 55.0%
ATCTTGCGACCGGTATCTGG+TGG - tig0018650:227910-227929 Msa1368770:CDS 55.0%
ATCTTCCGGCCACCAGATAC+CGG + tig0018650:227922-227941 None:intergenic 55.0%
GTGGTGGCCAGTGTTCCATA+TGG - tig0018650:227985-228004 Msa1368770:CDS 55.0%
GTCTCAGGAGCTGTTCAGCA+TGG - tig0018650:228020-228039 Msa1368770:CDS 55.0%
CCTCTGCAACCTGGCATGTC+TGG + tig0018650:221890-221909 None:intergenic 60.0%
CCAGACATGCCAGGTTGCAG+AGG - tig0018650:221887-221906 Msa1368770:CDS 60.0%
CTCCGACCCAGTCCCCATTT+AGG + tig0018650:224689-224708 None:intergenic 60.0%
AACCGTGCTTCGTTGCAGCG+CGG - tig0018650:226142-226161 Msa1368770:CDS 60.0%
TACCGCGCTGCAACGAAGCA+CGG + tig0018650:226147-226166 None:intergenic 60.0%
!! ATCGGGCGGTGTGCTGATTC+CGG - tig0018650:226355-226374 Msa1368770:CDS 60.0%
CGAAAGCCTGAAAGCGAGCC+TGG + tig0018650:227387-227406 None:intergenic 60.0%
CAACGGAAGGACCGGTGAGA+TGG - tig0018650:227612-227631 Msa1368770:intron 60.0%
CAGCGATCGGACCATCTCAC+CGG + tig0018650:227626-227645 None:intergenic 60.0%
CGGACATGTGGTGCAGTCTC+TGG + tig0018650:227672-227691 None:intergenic 60.0%
TCCTGTCAGCGACAGGCTGT+CGG + tig0018650:227741-227760 None:intergenic 60.0%
TCTGGTGGCCGGAAGATTCG+AGG - tig0018650:227925-227944 Msa1368770:CDS 60.0%
!! TCGGGCGGTGTGCTGATTCC+GGG - tig0018650:226356-226375 Msa1368770:CDS 65.0%
!! GCGGTGTGCTGATTCCGGGA+CGG - tig0018650:226360-226379 Msa1368770:CDS 65.0%
GTCGGGTCAGCGGGTGAACT+GGG + tig0018650:227723-227742 None:intergenic 65.0%
TGTCGGGTCAGCGGGTGAAC+TGG + tig0018650:227724-227743 None:intergenic 65.0%
CCTGTCAGCGACAGGCTGTC+GGG + tig0018650:227740-227759 None:intergenic 65.0%
TGCGACCGGTATCTGGTGGC+CGG - tig0018650:227914-227933 Msa1368770:CDS 65.0%
TGGTGAGCTGCTGGAGCGCG+AGG - tig0018650:223515-223534 Msa1368770:CDS 70.0%
GGTCAGCGGGTGAACTGGGC+CGG + tig0018650:227719-227738 None:intergenic 70.0%
CGACAGGCTGTCGGGTCAGC+GGG + tig0018650:227732-227751 None:intergenic 70.0%
GCGACAGGCTGTCGGGTCAG+CGG + tig0018650:227733-227752 None:intergenic 70.0%
CCCGACAGCCTGTCGCTGAC+AGG - tig0018650:227737-227756 Msa1368770:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0018650 gene 221232 228357 221232 ID=Msa1368770;Name=Msa1368770
tig0018650 mRNA 221232 228357 221232 ID=Msa1368770-mRNA-1;Parent=Msa1368770;Name=Msa1368770-mRNA-1;_AED=0.05;_eAED=0.05;_QI=156|0.77|0.9|0.9|0.77|0.7|10|280|1239
tig0018650 exon 221232 222013 221232 ID=Msa1368770-mRNA-1:exon:605;Parent=Msa1368770-mRNA-1
tig0018650 exon 222576 222847 222576 ID=Msa1368770-mRNA-1:exon:604;Parent=Msa1368770-mRNA-1
tig0018650 exon 223103 224047 223103 ID=Msa1368770-mRNA-1:exon:603;Parent=Msa1368770-mRNA-1
tig0018650 exon 224810 225101 224810 ID=Msa1368770-mRNA-1:exon:602;Parent=Msa1368770-mRNA-1
tig0018650 exon 225757 226637 225757 ID=Msa1368770-mRNA-1:exon:601;Parent=Msa1368770-mRNA-1
tig0018650 exon 226831 226983 226831 ID=Msa1368770-mRNA-1:exon:600;Parent=Msa1368770-mRNA-1
tig0018650 exon 227206 227418 227206 ID=Msa1368770-mRNA-1:exon:599;Parent=Msa1368770-mRNA-1
tig0018650 exon 227638 228186 227638 ID=Msa1368770-mRNA-1:exon:598;Parent=Msa1368770-mRNA-1
tig0018650 exon 228266 228284 228266 ID=Msa1368770-mRNA-1:exon:597;Parent=Msa1368770-mRNA-1
tig0018650 exon 228308 228357 228308 ID=Msa1368770-mRNA-1:exon:596;Parent=Msa1368770-mRNA-1
tig0018650 five_prime_UTR 228308 228357 228308 ID=Msa1368770-mRNA-1:five_prime_utr;Parent=Msa1368770-mRNA-1
tig0018650 five_prime_UTR 228266 228284 228266 ID=Msa1368770-mRNA-1:five_prime_utr;Parent=Msa1368770-mRNA-1
tig0018650 five_prime_UTR 228100 228186 228100 ID=Msa1368770-mRNA-1:five_prime_utr;Parent=Msa1368770-mRNA-1
tig0018650 CDS 227638 228099 227638 ID=Msa1368770-mRNA-1:cds;Parent=Msa1368770-mRNA-1
tig0018650 CDS 227206 227418 227206 ID=Msa1368770-mRNA-1:cds;Parent=Msa1368770-mRNA-1
tig0018650 CDS 226831 226983 226831 ID=Msa1368770-mRNA-1:cds;Parent=Msa1368770-mRNA-1
tig0018650 CDS 225757 226637 225757 ID=Msa1368770-mRNA-1:cds;Parent=Msa1368770-mRNA-1
tig0018650 CDS 224810 225101 224810 ID=Msa1368770-mRNA-1:cds;Parent=Msa1368770-mRNA-1
tig0018650 CDS 223103 224047 223103 ID=Msa1368770-mRNA-1:cds;Parent=Msa1368770-mRNA-1
tig0018650 CDS 222576 222847 222576 ID=Msa1368770-mRNA-1:cds;Parent=Msa1368770-mRNA-1
tig0018650 CDS 221512 222013 221512 ID=Msa1368770-mRNA-1:cds;Parent=Msa1368770-mRNA-1
tig0018650 three_prime_UTR 221232 221511 221232 ID=Msa1368770-mRNA-1:three_prime_utr;Parent=Msa1368770-mRNA-1
Gene Sequence

>Msa1368770

ATGGAACACATAGGTTCAAGCAAAGATGCTAACAACACCAACTACACAGAAATGGACATTGACCTCGACGACGATGAAGATCAATCCAACGCCGAAATCCTCAACGAACTCGGTGATGATATGGTCAAATACTTTTGCAAGAAAGCTTCCGTCATGTTCTTCGACCAATACGGTTTAATCAGTCACCAAATCAACTCGTACAATCAATTCATCAATTCTGGTCTTCAAGCCGCTTTCGATTCCTTCGGTGATCTCACTGTTACGCCTGGTTTTGATCCTTCTAAGAAAGGTGCTGATGAACATTACCGTTATGCTACGGTTAAGTTTGGGAAGGTTACGCTTGAGCGACCTAAGTTTTGGTGTGGTGAAGGGAATGCTCAAGAGTTGAAGATGCTTCCCAGACATGCCAGGTTGCAGAGGATGACTTATGCTTCTAAGATGAAAGTTGATGTTCACATCCAGGTATATGTTATGAAGAAGGTTCGAAGTGATAAGTTTAAGACTGGGAAAGAAGAATACATTGATAAAGATATTAAAGGGGAGGATACGAGGGAAATAACTATTGGGAGACTGCCTGTTATGGTCAAGTCTGATCTGTGTTGGATGAGTGAAACTGAGAAAGGTGATTGTGAATTTGACCACGGAGGCTACTTTCTGATTAAGGGTGCTGAAAAGTTATGGCGCCTATTGGTGGCAGATTTTGACCACGCCGATGTGGTAAATGGTGGTCAATATTGCAGGTTTTTCTGCCATAAATGTACCACAAAGTGGTCAAAATTGCAGAAATTTGGGTCTCGGCCACAATATGCCATAGACAATACTGCTTTTATTTTTATCGCACAAGAGCAAATATTTCTGAAGAGACTCTGGGTTTCAAATATTCCATACTGGGCTGTTGCTTTCAAGTCGCAGATGAAGAGAAATAGGATGGTTGTTAAATTGGTGGAAGGTTCGACGGAGGGAATTACACATGGAGAGAAGCTGCTCACAGTGTATTTTCTGTCTGTCGAGATACCTGTATGGATATTGTTTTTTGCTCTTGGTGTCACATCAGATAAAGAAATTGTTGATCTCATCGATTATGGAGAGGCAGATGGAAGAATTGAAAACATTCTCTTTGCATCCATCCGTGAGGCAGACGATAAATGTGAAGCATTTCGTAGGGGAAAGAACGCTCTTCTTTTCTTAGAGGAACGTGTAAAAGGCGTACAGTTTCCACCCGCAGAATCTATTGACGAGTGCTTTAACATGTATGTTTTTCCGAACATTAAAGGATTAAAAAGAAAGGCAAGGTATCTAGCTTACATGGTGAAGGTTCTTCTACTAGCATATACTGGCCGTCGAAAAACTGATAACAGGGACGATTTTCGAAACAAGAGGCTTGAGTTAGCTGGTGAGCTGCTGGAGCGCGAGGTTAAAGTGCACTTTGCACATGCTAGGAAGCGAATGGGGAAGGCCCTGCAGAGAGACCTTTATGGAGAACGAGAAGTTCGTCAAATTGAGCACTATCTTGACGCTTCCATTATTACAAATGGTCTCCAAAGAGCGTTTTCTACTGGAGCTTGGACACATCCTTTCAAAAGGATGGAAAGGATTTCTGGTGTGGTTGCAACTCTTGGGCGAACCAATCCATTACAAACCATGGCTGAATTAAGAAGAACAAGGCAACAAGTTCAGTACACAGGAAAGGTCGGGGATGCTAGATACCCGCATCCTTCTCACTGGGGTAAGGTTTGTTTTCTTTCCACCCCAGATGGTGAAAATTGTGGACTTGTAAAAAATTTGGCTGCCACAGGAGTAGTAAGTACCGATGTAACTGAATCCATACTTCCTCAGCTGTTTGATTGTGGGATGGAAGAACTTGTTGATGATACTACAACTGTTCTGGGGAAAAAAGACAAAGTTTTCCTAAATGGGGACTGGGTCGGAGTTTGTTCAGATTCCATATCATTTGTGGCAGAGCTACGAACTAGAAGACGGAGGAATGAGTTGCCTCATCAGGTGGAAATCAAAAGAGATCAGTGTCAACAAGAAGTGCGCATATTATCTGATGCAGGAAGGATTCTCCGTCCACTCTTGGTTGTTAGTAATCTGCTCAAGATTAAAGGATCTAAGTCTGAGCATAAATCTTTCCAGTCCCTATTGGATAATGGCGTGATTGAGCTGATTGGTCCTGAAGAAGAAGAGGACTTCAAGACTGCTTGGGGTGTTCAGTATTTGTTTGGCAAAGAGGGAAAATCTTCTGTGAAGTACACACATTGTGAACTTGATATGTCATTCTTATTAGGTCTAAGCTGCTCACTTGTTCCATTTGCAAATCATGACCATGCTAGGAGAGTGTTGTACCAATCCCAGAAGCATTCTTCTCAGGCTATTGGCTTTGCTACGACAAACCCAAATATAAGAGTTGATGCTTTGTCTCACCAACTGTTTTATCCACAAAGACCACTCTTTCAGACAATGACATCTGATTGTCTTGGAAAACCTGGATATCTTGGTCAGAGTAAAGTTGTTCCAAAGTCTGAATTCTATAATGGGCAGAATGCAATTGTGGCTGTCAATGTGCATCTCGGATATAATCAAGAAGATTCCTTGGTTATGAACCGTGCTTCGTTGCAGCGCGGTATGTTCAGATCTGAGCATATAAGGAGTTACAAAGCTGAAATTGAGAATAAGGAATCTTCAGAAAAGAGAAAGAAACCTGAAGACATTGTTAATTTTGGAAAGATACAGAGTAAAATTGGCCGAGTTGATAGCCTTGATGATGATGGCTTTCCATTTGTTGGAGCAAATTTGCAAAGTGGTGATATTATCATCGGGCGGTGTGCTGATTCCGGGACGGACCATAGTATAAAGCTAAAGCACACCGAAAGGGGTTATGTTCAAAAGGTTGTGCTGTCTTCGAATGATGAGGGGAAGAATTTTGCTGTTGTTTCGCTGAGACAGGTTAGGAGCCCAGTTCTTGGAGATAAGTTCTCCAGTATGCATGGACAGAAGGGTGTTTTGGGATTTCTGGAGTCTCAGGAAAATTTCCCCTTCACAAAACAAGGCATTGTTCCTGATATTGTTATAAATCCACATGCATTTCCTTCGCGACAAACTCCTGGACAACTACTAGAGGCTGCTTTGGGAAAGGGCATCGCTTGTGTTGGTTCACTGAGGAATGCTACTCCTTTCTCCACTTCCTCTGTTGAAGCCATTACTGACCAGCTTCATAGAGCTGGCTTTTCAAGATGGGGGAACGAACGAGTATACAACGGAAGGACCGGTGAGATGGTCCGATCGCTGATATTTATGGGCCCAACATTCTACCAGAGACTGCACCACATGTCCGAAGACAAAGTCAAATTCAGGAACACCGGCCCAGTTCACCCGCTGACCCGACAGCCTGTCGCTGACAGGAAGCGATTTGGAGGTATCAAGTTTGGTGAGATGGAGCGTGATTGCCTGATAGCTCATGGTGCTTCAGCAAATTTGTATGAACGCCTCTTCACCCTGAGTGATTCGTCTCAGATACACATTTGTAGTAAATGCAAGAATGTTGCAAATGTGATCTTGCGACCGGTATCTGGTGGCCGGAAGATTCGAGGTCCCTACTGCCGTTTCTGTGAATCAGCCGATGACATTGTGGTGGCCAGTGTTCCATATGGTGCAAAGTTATTGTCTCAGGAGCTGTTCAGCATGGGCATTAATCTCAAATTTGAAACTGAGCTTTGCTAG
Protein sequence

>Msa1368770

MEHIGSSKDANNTNYTEMDIDLDDDEDQSNAEILNELGDDMVKYFCKKASVMFFDQYGLISHQINSYNQFINSGLQAAFDSFGDLTVTPGFDPSKKGADEHYRYATVKFGKVTLERPKFWCGEGNAQELKMLPRHARLQRMTYASKMKVDVHIQVYVMKKVRSDKFKTGKEEYIDKDIKGEDTREITIGRLPVMVKSDLCWMSETEKGDCEFDHGGYFLIKGAEKLWRLLVADFDHADVVNGGQYCRFFCHKCTTKWSKLQKFGSRPQYAIDNTAFIFIAQEQIFLKRLWVSNIPYWAVAFKSQMKRNRMVVKLVEGSTEGITHGEKLLTVYFLSVEIPVWILFFALGVTSDKEIVDLIDYGEADGRIENILFASIREADDKCEAFRRGKNALLFLEERVKGVQFPPAESIDECFNMYVFPNIKGLKRKARYLAYMVKVLLLAYTGRRKTDNRDDFRNKRLELAGELLEREVKVHFAHARKRMGKALQRDLYGEREVRQIEHYLDASIITNGLQRAFSTGAWTHPFKRMERISGVVATLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAATGVVSTDVTESILPQLFDCGMEELVDDTTTVLGKKDKVFLNGDWVGVCSDSISFVAELRTRRRRNELPHQVEIKRDQCQQEVRILSDAGRILRPLLVVSNLLKIKGSKSEHKSFQSLLDNGVIELIGPEEEEDFKTAWGVQYLFGKEGKSSVKYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIGFATTNPNIRVDALSHQLFYPQRPLFQTMTSDCLGKPGYLGQSKVVPKSEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLQRGMFRSEHIRSYKAEIENKESSEKRKKPEDIVNFGKIQSKIGRVDSLDDDGFPFVGANLQSGDIIIGRCADSGTDHSIKLKHTERGYVQKVVLSSNDEGKNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACVGSLRNATPFSTSSVEAITDQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLYERLFTLSDSSQIHICSKCKNVANVILRPVSGGRKIRGPYCRFCESADDIVVASVPYGAKLLSQELFSMGINLKFETELC*