Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563150 | XP_013446522.1 | 98.885 | 269 | 2 | 1 | 1 | 268 | 1 | 269 | 5.63e-172 | 485 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563150 | sp|Q55A45|RSMB_DICDI | 57.534 | 146 | 46 | 5 | 5 | 142 | 6 | 143 | 8.21e-43 | 150 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563150 | A0A072TSQ6 | 98.885 | 269 | 2 | 1 | 1 | 268 | 1 | 269 | 2.69e-172 | 485 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0563150 | Msa1082010 | 0.813406 | 2.600813e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563150 | MtrunA17_Chr8g0376981 | 98.885 | 269 | 2 | 1 | 1 | 268 | 1 | 269 | 5.18e-176 | 485 |
| Msa0563150 | MtrunA17_Chr5g0443581 | 93.956 | 182 | 8 | 3 | 1 | 181 | 1 | 180 | 7.37e-111 | 321 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563150 | AT5G44500.1 | 82.353 | 153 | 26 | 1 | 1 | 153 | 1 | 152 | 1.01e-85 | 256 |
| Msa0563150 | AT5G44500.2 | 82.353 | 153 | 26 | 1 | 1 | 153 | 1 | 152 | 1.01e-85 | 256 |
| Msa0563150 | AT4G20440.2 | 82.317 | 164 | 25 | 3 | 1 | 164 | 1 | 160 | 9.07e-79 | 239 |
| Msa0563150 | AT4G20440.1 | 82.317 | 164 | 25 | 3 | 1 | 164 | 1 | 160 | 9.07e-79 | 239 |
| Msa0563150 | AT4G20440.4 | 82.317 | 164 | 25 | 3 | 1 | 164 | 1 | 160 | 9.07e-79 | 239 |
| Msa0563150 | AT4G20440.5 | 82.317 | 164 | 25 | 3 | 1 | 164 | 1 | 160 | 9.07e-79 | 239 |
| Msa0563150 | AT4G20440.3 | 82.317 | 164 | 25 | 3 | 1 | 164 | 1 | 160 | 9.07e-79 | 239 |
Find 131 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGATGTATTGAAGCATTT+TGG | 0.195080 | 4_1:-63450456 | None:intergenic |
| GGTAGTGGTGTTCCTGTCTT+TGG | 0.265332 | 4_1:+63451166 | Msa0563150:CDS |
| CGCAAACTTCCACCGGTAAA+AGG | 0.268999 | 4_1:+63450581 | Msa0563150:CDS |
| TGTTGCTGCTGCTGCTGATT+TGG | 0.277019 | 4_1:-63451217 | None:intergenic |
| CAAGCTCAGCCTGGTCTTGC+TGG | 0.294341 | 4_1:+63450809 | Msa0563150:CDS |
| GGTCCTCCTCCGCCGCAATT+TGG | 0.303202 | 4_1:+63451022 | Msa0563150:CDS |
| CCTGGAATTGGTCGTGCTGC+TGG | 0.318434 | 4_1:+63450755 | Msa0563150:CDS |
| CGTCCGCCGGTTTCGTATCC+TGG | 0.326476 | 4_1:+63450887 | Msa0563150:CDS |
| GGACGAGGCCCCTGCATTCC+AGG | 0.329208 | 4_1:-63451124 | None:intergenic |
| GTTAATGCTGCTGCCATGGC+TGG | 0.351133 | 4_1:+63450731 | Msa0563150:CDS |
| CCACCTGGCATACCGGGATA+TGG | 0.364348 | 4_1:-63450947 | None:intergenic |
| TGCTGCTGATTTGGAGGAGG+GGG | 0.381635 | 4_1:-63451208 | None:intergenic |
| CCAGGAGGAGGAGGCATTCC+GGG | 0.384559 | 4_1:-63451145 | None:intergenic |
| GCCATGGCTGGTCCTGGAAT+TGG | 0.385194 | 4_1:+63450743 | Msa0563150:CDS |
| ACCAGGAGGAGGAGGCATTC+CGG | 0.385922 | 4_1:-63451146 | None:intergenic |
| TCCTCCTCATCCTGGAATGC+AGG | 0.390826 | 4_1:+63451114 | Msa0563150:CDS |
| GCTGCTGCTGATTTGGAGGA+GGG | 0.392365 | 4_1:-63451210 | None:intergenic |
| GCCTTGGAGCGAGATTCTTC+AGG | 0.398102 | 4_1:-63450707 | None:intergenic |
| TGCTGCTGCTGATTTGGAGG+AGG | 0.400474 | 4_1:-63451211 | None:intergenic |
| CTTCGCCACGGAGGAGTAGA+AGG | 0.412579 | 4_1:-63450649 | None:intergenic |
| ATCATCTGTCCAGGAGGAGG+TGG | 0.414307 | 4_1:-63451082 | None:intergenic |
| TGCTGCTGCTGCTGATTTGG+AGG | 0.415379 | 4_1:-63451214 | None:intergenic |
| GCCGCAGATTTCGCGTCCGC+CGG | 0.415808 | 4_1:+63450874 | Msa0563150:CDS |
| CCTCCTCATCCTGGAATGCA+GGG | 0.419349 | 4_1:+63451115 | Msa0563150:CDS |
| CCAGGCGGTGGACGCATCAC+TGG | 0.423398 | 4_1:-63450917 | None:intergenic |
| GCTGCTGCCATGGCTGGTCC+TGG | 0.429755 | 4_1:+63450737 | Msa0563150:CDS |
| GGCATACCAAATTGCGGCGG+AGG | 0.431083 | 4_1:-63451028 | None:intergenic |
| CCCGGAATGCCTCCTCCTCC+TGG | 0.431670 | 4_1:+63451145 | Msa0563150:CDS |
| GCTGGTCCTGTTCGTGGTGT+TGG | 0.434114 | 4_1:+63450827 | Msa0563150:CDS |
| CCAGCAGCACGACCAATTCC+AGG | 0.447795 | 4_1:-63450755 | None:intergenic |
| TCAACTCGTCGGAAAGTTCA+TGG | 0.449599 | 4_1:+63450511 | Msa0563150:CDS |
| CGCCACATGAATCTCGTTCT+CGG | 0.453535 | 4_1:+63450542 | Msa0563150:CDS |
| GGCAGCAGCATTAACAGCCT+TGG | 0.454031 | 4_1:-63450723 | None:intergenic |
| CGGAGGACCACCTGGCATAC+CGG | 0.454726 | 4_1:-63450954 | None:intergenic |
| GGCTGTTAATGCTGCTGCCA+TGG | 0.456266 | 4_1:+63450727 | Msa0563150:CDS |
| CCAGGAGGAGGTGGGCCCAT+AGG | 0.458526 | 4_1:-63451073 | None:intergenic |
| CGAGTGTGCGGCGGTCTTCA+CGG | 0.461195 | 4_1:-63450625 | None:intergenic |
| GTTGTTTCTATGACAGTTGA+AGG | 0.464977 | 4_1:+63450674 | Msa0563150:CDS |
| GGTCCACCAACACCACGAAC+AGG | 0.467407 | 4_1:-63450833 | None:intergenic |
| TCAGTTTGGACAGAGACCTA+TGG | 0.472156 | 4_1:+63451057 | Msa0563150:CDS |
| CTCATCATCTGTCCAGGAGG+AGG | 0.476906 | 4_1:-63451085 | None:intergenic |
| GGAGGAGGACCACCAGGTCT+CGG | 0.477467 | 4_1:-63451010 | None:intergenic |
| GGTGTTGGTGGACCTGCTCC+TGG | 0.479693 | 4_1:+63450842 | Msa0563150:CDS |
| GGTCTTGCTGGTCCTGTTCG+TGG | 0.480513 | 4_1:+63450821 | Msa0563150:CDS |
| CTGGAATTGGTCGTGCTGCT+GGG | 0.482553 | 4_1:+63450756 | Msa0563150:CDS |
| AGAGGACCTCCTCCTCATCC+TGG | 0.484171 | 4_1:+63451106 | Msa0563150:CDS |
| TGAATAACTGTCGCCGGAGG+AGG | 0.485871 | 4_1:-63450788 | None:intergenic |
| ATACCAAATTGCGGCGGAGG+AGG | 0.486511 | 4_1:-63451025 | None:intergenic |
| CGTGAAGACCGCCGCACACT+CGG | 0.489568 | 4_1:+63450626 | Msa0563150:CDS |
| ATGCCATATCCCGGTATGCC+AGG | 0.490273 | 4_1:+63450944 | Msa0563150:CDS |
| GGTGGCGGACCACCTGGTCT+CGG | 0.492011 | 4_1:-63450974 | None:intergenic |
| CTTGAATTGTTACGCGCATA+CGG | 0.496159 | 4_1:-63450481 | None:intergenic |
| CCTATGGGCCCACCTCCTCC+TGG | 0.497010 | 4_1:+63451073 | Msa0563150:CDS |
| GGAGGAGCAAATTGCGGTGG+CGG | 0.503465 | 4_1:-63450989 | None:intergenic |
| CCAGTGATGCGTCCACCGCC+TGG | 0.505301 | 4_1:+63450917 | Msa0563150:CDS |
| GGAGGAGGCATTCCGGGACG+AGG | 0.505939 | 4_1:-63451139 | None:intergenic |
| TGCGGCGGAGGAGGACCACC+AGG | 0.508853 | 4_1:-63451016 | None:intergenic |
| CTCTGTCCAAACTGAGGAGG+GGG | 0.509118 | 4_1:-63451049 | None:intergenic |
| GGAGGACCACCTGGCATACC+GGG | 0.510653 | 4_1:-63450953 | None:intergenic |
| ATGCCTCCTCCTCCTGGTAG+TGG | 0.510791 | 4_1:+63451151 | Msa0563150:CDS |
| AATTGCGGTGGCGGACCACC+TGG | 0.511941 | 4_1:-63450980 | None:intergenic |
| CTGCTGCTGATTTGGAGGAG+GGG | 0.512495 | 4_1:-63451209 | None:intergenic |
| GGACGAGGTGGACCAAAGAC+AGG | 0.514937 | 4_1:-63451178 | None:intergenic |
| GGCCCCTGCATTCCAGGATG+AGG | 0.515905 | 4_1:-63451118 | None:intergenic |
| GGTCCTGTTCGTGGTGTTGG+TGG | 0.516931 | 4_1:+63450830 | Msa0563150:CDS |
| GGAATGCAGGGGCCTCGTCC+CGG | 0.517571 | 4_1:+63451127 | Msa0563150:CDS |
| CCTGGTCTCGGAGGACCACC+TGG | 0.517685 | 4_1:-63450962 | None:intergenic |
| GGACCACCAGGATACGAAAC+CGG | 0.519951 | 4_1:-63450893 | None:intergenic |
| CAATTTGCTCCTCCGAGACC+TGG | 0.521655 | 4_1:+63450998 | Msa0563150:CDS |
| CGAGATTCTTCAGGAGGAGG+AGG | 0.523409 | 4_1:-63450698 | None:intergenic |
| CCGGGATATGGCATCTGACC+AGG | 0.523672 | 4_1:-63450935 | None:intergenic |
| GGTCCTCTCATCATCTGTCC+AGG | 0.524181 | 4_1:-63451091 | None:intergenic |
| GAGCGAGATTCTTCAGGAGG+AGG | 0.524910 | 4_1:-63450701 | None:intergenic |
| CCAGGTGGTCCTCCGAGACC+AGG | 0.525026 | 4_1:+63450962 | Msa0563150:CDS |
| TGCATTCCAGGATGAGGAGG+AGG | 0.529746 | 4_1:-63451112 | None:intergenic |
| GTCTCTGTCCAAACTGAGGA+GGG | 0.534002 | 4_1:-63451051 | None:intergenic |
| GGCTGCATCATACCAGGAGC+AGG | 0.537879 | 4_1:-63450854 | None:intergenic |
| CAGTTTGGACAGAGACCTAT+GGG | 0.538307 | 4_1:+63451058 | Msa0563150:CDS |
| ATTGGTCGTGCTGCTGGGAG+AGG | 0.539889 | 4_1:+63450761 | Msa0563150:CDS |
| GTCTTTGGTCCACCTCGTCC+CGG | 0.542041 | 4_1:+63451181 | Msa0563150:CDS |
| TATGGCATCTGACCAGGCGG+TGG | 0.542831 | 4_1:-63450929 | None:intergenic |
| GAGATTCATGTGGCGGTCGA+AGG | 0.548205 | 4_1:-63450534 | None:intergenic |
| CGCATCACTGGAGGACCACC+AGG | 0.549753 | 4_1:-63450905 | None:intergenic |
| ATCTGCGGCTGCATCATACC+AGG | 0.556260 | 4_1:-63450860 | None:intergenic |
| ACAGTTATTCAAGCTCAGCC+TGG | 0.558727 | 4_1:+63450800 | Msa0563150:CDS |
| CCCTGCATTCCAGGATGAGG+AGG | 0.561972 | 4_1:-63451115 | None:intergenic |
| TCATCTGTCCAGGAGGAGGT+GGG | 0.563438 | 4_1:-63451081 | None:intergenic |
| GTCTTCACGGTCACCGTCGG+TGG | 0.565080 | 4_1:-63450612 | None:intergenic |
| AAGACAGGAACACCACTACC+AGG | 0.567248 | 4_1:-63451163 | None:intergenic |
| CGAACAGGACCAGCAAGACC+AGG | 0.568021 | 4_1:-63450818 | None:intergenic |
| CTCCTCATCCTGGAATGCAG+GGG | 0.568754 | 4_1:+63451116 | Msa0563150:CDS |
| CCTGGTCAGATGCCATATCC+CGG | 0.573529 | 4_1:+63450935 | Msa0563150:CDS |
| TCCTGAAGAATCTCGCTCCA+AGG | 0.576058 | 4_1:+63450706 | Msa0563150:CDS |
| TGGGAGAGGTATTCCTCCTC+CGG | 0.576694 | 4_1:+63450775 | Msa0563150:CDS |
| GCGGTCTTCACGGTCACCGT+CGG | 0.576706 | 4_1:-63450615 | None:intergenic |
| AGAGTTTCGCAAACTTCCAC+CGG | 0.582618 | 4_1:+63450574 | Msa0563150:CDS |
| ACACCACTACCAGGAGGAGG+AGG | 0.583299 | 4_1:-63451154 | None:intergenic |
| TGAGCTTGAATAACTGTCGC+CGG | 0.590066 | 4_1:-63450794 | None:intergenic |
| ACCAATTCCAGGACCAGCCA+TGG | 0.591372 | 4_1:-63450744 | None:intergenic |
| GGAGTAGAAGGCCGAGTGTG+CGG | 0.601520 | 4_1:-63450637 | None:intergenic |
| GGCGGTGGACGCATCACTGG+AGG | 0.605634 | 4_1:-63450914 | None:intergenic |
| GGTCTCTGTCCAAACTGAGG+AGG | 0.612028 | 4_1:-63451052 | None:intergenic |
| TTGGAGCGAGATTCTTCAGG+AGG | 0.614975 | 4_1:-63450704 | None:intergenic |
| GGAACACCACTACCAGGAGG+AGG | 0.616003 | 4_1:-63451157 | None:intergenic |
| ACCGGCGGACGCGAAATCTG+CGG | 0.616908 | 4_1:-63450875 | None:intergenic |
| CAAGACGGTCGTCAACTCGT+CGG | 0.618826 | 4_1:+63450500 | Msa0563150:CDS |
| TCTCTGTCCAAACTGAGGAG+GGG | 0.621232 | 4_1:-63451050 | None:intergenic |
| TCTACTCCTCCGTGGCGAAG+AGG | 0.623882 | 4_1:+63450652 | Msa0563150:CDS |
| TTTGCTCCTCCGAGACCTGG+TGG | 0.625587 | 4_1:+63451001 | Msa0563150:CDS |
| CTCGGAGGAGCAAATTGCGG+TGG | 0.627944 | 4_1:-63450992 | None:intergenic |
| CCTCCTGGACAGATGATGAG+AGG | 0.637519 | 4_1:+63451088 | Msa0563150:CDS |
| CGAGAACGAGATTCATGTGG+CGG | 0.654892 | 4_1:-63450541 | None:intergenic |
| GGTCTCGGAGGAGCAAATTG+CGG | 0.656856 | 4_1:-63450995 | None:intergenic |
| GGTGGTCCTCCGAGACCAGG+TGG | 0.664434 | 4_1:+63450965 | Msa0563150:CDS |
| GTAGAAGGCCGAGTGTGCGG+CGG | 0.664742 | 4_1:-63450634 | None:intergenic |
| CCTCTCATCATCTGTCCAGG+AGG | 0.666388 | 4_1:-63451088 | None:intergenic |
| TAGAAACAACCTCTTCGCCA+CGG | 0.670672 | 4_1:-63450661 | None:intergenic |
| GGCGGACCACCTGGTCTCGG+AGG | 0.672885 | 4_1:-63450971 | None:intergenic |
| CCACCAGGATACGAAACCGG+CGG | 0.674451 | 4_1:-63450890 | None:intergenic |
| CCATATCCCGGTATGCCAGG+TGG | 0.677559 | 4_1:+63450947 | Msa0563150:CDS |
| ATAGGTCTCTGTCCAAACTG+AGG | 0.679573 | 4_1:-63451055 | None:intergenic |
| CGCCGAGAACGAGATTCATG+TGG | 0.682544 | 4_1:-63450544 | None:intergenic |
| GCTTGAATAACTGTCGCCGG+AGG | 0.688958 | 4_1:-63450791 | None:intergenic |
| GGAGGACCACCAGGTCTCGG+AGG | 0.690122 | 4_1:-63451007 | None:intergenic |
| CTCGGCCTTCTACTCCTCCG+TGG | 0.699215 | 4_1:+63450644 | Msa0563150:CDS |
| CCGCCGGTTTCGTATCCTGG+TGG | 0.700251 | 4_1:+63450890 | Msa0563150:CDS |
| GGATATGGCATCTGACCAGG+CGG | 0.715982 | 4_1:-63450932 | None:intergenic |
| AAAGGTAAGAAAACCACCGA+CGG | 0.721265 | 4_1:+63450599 | Msa0563150:CDS |
| ATGCGCGTAACAATTCAAGA+CGG | 0.746228 | 4_1:+63450485 | Msa0563150:CDS |
| AAACAACCTCTTCGCCACGG+AGG | 0.752456 | 4_1:-63450658 | None:intergenic |
| ACAGGAACACCACTACCAGG+AGG | 0.753038 | 4_1:-63451160 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTGATGTATTGAAGCATTT+TGG | - | chr4_1:63450459-63450478 | None:intergenic | 30.0% |
| !! | GTTGATGTATTGAAGCATTT+TGG | - | chr4_1:63450459-63450478 | None:intergenic | 30.0% |
| ! | GTGGTTTTCTTACCTTTTAC+CGG | - | chr4_1:63450596-63450615 | None:intergenic | 35.0% |
| !! | GTTGTTTCTATGACAGTTGA+AGG | + | chr4_1:63450674-63450693 | Msa0563150:CDS | 35.0% |
| ! | GTGGTTTTCTTACCTTTTAC+CGG | - | chr4_1:63450596-63450615 | None:intergenic | 35.0% |
| !! | GTTGTTTCTATGACAGTTGA+AGG | + | chr4_1:63450674-63450693 | Msa0563150:CDS | 35.0% |
| CTTGAATTGTTACGCGCATA+CGG | - | chr4_1:63450484-63450503 | None:intergenic | 40.0% | |
| ATGCGCGTAACAATTCAAGA+CGG | + | chr4_1:63450485-63450504 | Msa0563150:CDS | 40.0% | |
| ! | GTTTTCTTACCTTTTACCGG+TGG | - | chr4_1:63450593-63450612 | None:intergenic | 40.0% |
| AAAGGTAAGAAAACCACCGA+CGG | + | chr4_1:63450599-63450618 | Msa0563150:CDS | 40.0% | |
| CTTGAATTGTTACGCGCATA+CGG | - | chr4_1:63450484-63450503 | None:intergenic | 40.0% | |
| ATGCGCGTAACAATTCAAGA+CGG | + | chr4_1:63450485-63450504 | Msa0563150:CDS | 40.0% | |
| ! | GTTTTCTTACCTTTTACCGG+TGG | - | chr4_1:63450593-63450612 | None:intergenic | 40.0% |
| AAAGGTAAGAAAACCACCGA+CGG | + | chr4_1:63450599-63450618 | Msa0563150:CDS | 40.0% | |
| TCAACTCGTCGGAAAGTTCA+TGG | + | chr4_1:63450511-63450530 | Msa0563150:CDS | 45.0% | |
| AGAGTTTCGCAAACTTCCAC+CGG | + | chr4_1:63450574-63450593 | Msa0563150:CDS | 45.0% | |
| TAGAAACAACCTCTTCGCCA+CGG | - | chr4_1:63450664-63450683 | None:intergenic | 45.0% | |
| TGAGCTTGAATAACTGTCGC+CGG | - | chr4_1:63450797-63450816 | None:intergenic | 45.0% | |
| ACAGTTATTCAAGCTCAGCC+TGG | + | chr4_1:63450800-63450819 | Msa0563150:CDS | 45.0% | |
| ATAGGTCTCTGTCCAAACTG+AGG | - | chr4_1:63451058-63451077 | None:intergenic | 45.0% | |
| TCAGTTTGGACAGAGACCTA+TGG | + | chr4_1:63451057-63451076 | Msa0563150:CDS | 45.0% | |
| CAGTTTGGACAGAGACCTAT+GGG | + | chr4_1:63451058-63451077 | Msa0563150:CDS | 45.0% | |
| TCAACTCGTCGGAAAGTTCA+TGG | + | chr4_1:63450511-63450530 | Msa0563150:CDS | 45.0% | |
| AGAGTTTCGCAAACTTCCAC+CGG | + | chr4_1:63450574-63450593 | Msa0563150:CDS | 45.0% | |
| TAGAAACAACCTCTTCGCCA+CGG | - | chr4_1:63450664-63450683 | None:intergenic | 45.0% | |
| TGAGCTTGAATAACTGTCGC+CGG | - | chr4_1:63450797-63450816 | None:intergenic | 45.0% | |
| ACAGTTATTCAAGCTCAGCC+TGG | + | chr4_1:63450800-63450819 | Msa0563150:CDS | 45.0% | |
| ATAGGTCTCTGTCCAAACTG+AGG | - | chr4_1:63451058-63451077 | None:intergenic | 45.0% | |
| TCAGTTTGGACAGAGACCTA+TGG | + | chr4_1:63451057-63451076 | Msa0563150:CDS | 45.0% | |
| CAGTTTGGACAGAGACCTAT+GGG | + | chr4_1:63451058-63451077 | Msa0563150:CDS | 45.0% | |
| CGAGAACGAGATTCATGTGG+CGG | - | chr4_1:63450544-63450563 | None:intergenic | 50.0% | |
| CGCCACATGAATCTCGTTCT+CGG | + | chr4_1:63450542-63450561 | Msa0563150:CDS | 50.0% | |
| CGCAAACTTCCACCGGTAAA+AGG | + | chr4_1:63450581-63450600 | Msa0563150:CDS | 50.0% | |
| TTGGAGCGAGATTCTTCAGG+AGG | - | chr4_1:63450707-63450726 | None:intergenic | 50.0% | |
| TCCTGAAGAATCTCGCTCCA+AGG | + | chr4_1:63450706-63450725 | Msa0563150:CDS | 50.0% | |
| TCTCTGTCCAAACTGAGGAG+GGG | - | chr4_1:63451053-63451072 | None:intergenic | 50.0% | |
| GTCTCTGTCCAAACTGAGGA+GGG | - | chr4_1:63451054-63451073 | None:intergenic | 50.0% | |
| AAGACAGGAACACCACTACC+AGG | - | chr4_1:63451166-63451185 | None:intergenic | 50.0% | |
| ! | GGTAGTGGTGTTCCTGTCTT+TGG | + | chr4_1:63451166-63451185 | Msa0563150:CDS | 50.0% |
| ! | TGTTGCTGCTGCTGCTGATT+TGG | - | chr4_1:63451220-63451239 | None:intergenic | 50.0% |
| CGAGAACGAGATTCATGTGG+CGG | - | chr4_1:63450544-63450563 | None:intergenic | 50.0% | |
| CGCCACATGAATCTCGTTCT+CGG | + | chr4_1:63450542-63450561 | Msa0563150:CDS | 50.0% | |
| CGCAAACTTCCACCGGTAAA+AGG | + | chr4_1:63450581-63450600 | Msa0563150:CDS | 50.0% | |
| TTGGAGCGAGATTCTTCAGG+AGG | - | chr4_1:63450707-63450726 | None:intergenic | 50.0% | |
| TCCTGAAGAATCTCGCTCCA+AGG | + | chr4_1:63450706-63450725 | Msa0563150:CDS | 50.0% | |
| TCTCTGTCCAAACTGAGGAG+GGG | - | chr4_1:63451053-63451072 | None:intergenic | 50.0% | |
| GTCTCTGTCCAAACTGAGGA+GGG | - | chr4_1:63451054-63451073 | None:intergenic | 50.0% | |
| AAGACAGGAACACCACTACC+AGG | - | chr4_1:63451166-63451185 | None:intergenic | 50.0% | |
| ! | GGTAGTGGTGTTCCTGTCTT+TGG | + | chr4_1:63451166-63451185 | Msa0563150:CDS | 50.0% |
| ! | TGTTGCTGCTGCTGCTGATT+TGG | - | chr4_1:63451220-63451239 | None:intergenic | 50.0% |
| CAAGACGGTCGTCAACTCGT+CGG | + | chr4_1:63450500-63450519 | Msa0563150:CDS | 55.0% | |
| GAGATTCATGTGGCGGTCGA+AGG | - | chr4_1:63450537-63450556 | None:intergenic | 55.0% | |
| CGCCGAGAACGAGATTCATG+TGG | - | chr4_1:63450547-63450566 | None:intergenic | 55.0% | |
| AAACAACCTCTTCGCCACGG+AGG | - | chr4_1:63450661-63450680 | None:intergenic | 55.0% | |
| CGAGATTCTTCAGGAGGAGG+AGG | - | chr4_1:63450701-63450720 | None:intergenic | 55.0% | |
| GAGCGAGATTCTTCAGGAGG+AGG | - | chr4_1:63450704-63450723 | None:intergenic | 55.0% | |
| GCCTTGGAGCGAGATTCTTC+AGG | - | chr4_1:63450710-63450729 | None:intergenic | 55.0% | |
| GGCAGCAGCATTAACAGCCT+TGG | - | chr4_1:63450726-63450745 | None:intergenic | 55.0% | |
| GGCTGTTAATGCTGCTGCCA+TGG | + | chr4_1:63450727-63450746 | Msa0563150:CDS | 55.0% | |
| GTTAATGCTGCTGCCATGGC+TGG | + | chr4_1:63450731-63450750 | Msa0563150:CDS | 55.0% | |
| ACCAATTCCAGGACCAGCCA+TGG | - | chr4_1:63450747-63450766 | None:intergenic | 55.0% | |
| ! | CTGGAATTGGTCGTGCTGCT+GGG | + | chr4_1:63450756-63450775 | Msa0563150:CDS | 55.0% |
| !! | TGGGAGAGGTATTCCTCCTC+CGG | + | chr4_1:63450775-63450794 | Msa0563150:CDS | 55.0% |
| TGAATAACTGTCGCCGGAGG+AGG | - | chr4_1:63450791-63450810 | None:intergenic | 55.0% | |
| GCTTGAATAACTGTCGCCGG+AGG | - | chr4_1:63450794-63450813 | None:intergenic | 55.0% | |
| ATCTGCGGCTGCATCATACC+AGG | - | chr4_1:63450863-63450882 | None:intergenic | 55.0% | |
| GGACCACCAGGATACGAAAC+CGG | - | chr4_1:63450896-63450915 | None:intergenic | 55.0% | |
| GGATATGGCATCTGACCAGG+CGG | - | chr4_1:63450935-63450954 | None:intergenic | 55.0% | |
| CCTGGTCAGATGCCATATCC+CGG | + | chr4_1:63450935-63450954 | Msa0563150:CDS | 55.0% | |
| ATGCCATATCCCGGTATGCC+AGG | + | chr4_1:63450944-63450963 | Msa0563150:CDS | 55.0% | |
| GGTCTCGGAGGAGCAAATTG+CGG | - | chr4_1:63450998-63451017 | None:intergenic | 55.0% | |
| ! | CAATTTGCTCCTCCGAGACC+TGG | + | chr4_1:63450998-63451017 | Msa0563150:CDS | 55.0% |
| ATACCAAATTGCGGCGGAGG+AGG | - | chr4_1:63451028-63451047 | None:intergenic | 55.0% | |
| ! | GGAGGGGGCATACCAAATTG+CGG | - | chr4_1:63451037-63451056 | None:intergenic | 55.0% |
| CTCTGTCCAAACTGAGGAGG+GGG | - | chr4_1:63451052-63451071 | None:intergenic | 55.0% | |
| GGTCTCTGTCCAAACTGAGG+AGG | - | chr4_1:63451055-63451074 | None:intergenic | 55.0% | |
| TCATCTGTCCAGGAGGAGGT+GGG | - | chr4_1:63451084-63451103 | None:intergenic | 55.0% | |
| ATCATCTGTCCAGGAGGAGG+TGG | - | chr4_1:63451085-63451104 | None:intergenic | 55.0% | |
| CTCATCATCTGTCCAGGAGG+AGG | - | chr4_1:63451088-63451107 | None:intergenic | 55.0% | |
| CCTCTCATCATCTGTCCAGG+AGG | - | chr4_1:63451091-63451110 | None:intergenic | 55.0% | |
| CCTCCTGGACAGATGATGAG+AGG | + | chr4_1:63451088-63451107 | Msa0563150:CDS | 55.0% | |
| GGTCCTCTCATCATCTGTCC+AGG | - | chr4_1:63451094-63451113 | None:intergenic | 55.0% | |
| TGCATTCCAGGATGAGGAGG+AGG | - | chr4_1:63451115-63451134 | None:intergenic | 55.0% | |
| TCCTCCTCATCCTGGAATGC+AGG | + | chr4_1:63451114-63451133 | Msa0563150:CDS | 55.0% | |
| CCTCCTCATCCTGGAATGCA+GGG | + | chr4_1:63451115-63451134 | Msa0563150:CDS | 55.0% | |
| CTCCTCATCCTGGAATGCAG+GGG | + | chr4_1:63451116-63451135 | Msa0563150:CDS | 55.0% | |
| ACAGGAACACCACTACCAGG+AGG | - | chr4_1:63451163-63451182 | None:intergenic | 55.0% | |
| !! | TGCTGCTGATTTGGAGGAGG+GGG | - | chr4_1:63451211-63451230 | None:intergenic | 55.0% |
| !! | CTGCTGCTGATTTGGAGGAG+GGG | - | chr4_1:63451212-63451231 | None:intergenic | 55.0% |
| !! | GCTGCTGCTGATTTGGAGGA+GGG | - | chr4_1:63451213-63451232 | None:intergenic | 55.0% |
| !! | TGCTGCTGCTGATTTGGAGG+AGG | - | chr4_1:63451214-63451233 | None:intergenic | 55.0% |
| !! | TGCTGCTGCTGCTGATTTGG+AGG | - | chr4_1:63451217-63451236 | None:intergenic | 55.0% |
| CAAGACGGTCGTCAACTCGT+CGG | + | chr4_1:63450500-63450519 | Msa0563150:CDS | 55.0% | |
| GAGATTCATGTGGCGGTCGA+AGG | - | chr4_1:63450537-63450556 | None:intergenic | 55.0% | |
| CGCCGAGAACGAGATTCATG+TGG | - | chr4_1:63450547-63450566 | None:intergenic | 55.0% | |
| AAACAACCTCTTCGCCACGG+AGG | - | chr4_1:63450661-63450680 | None:intergenic | 55.0% | |
| CGAGATTCTTCAGGAGGAGG+AGG | - | chr4_1:63450701-63450720 | None:intergenic | 55.0% | |
| GAGCGAGATTCTTCAGGAGG+AGG | - | chr4_1:63450704-63450723 | None:intergenic | 55.0% | |
| GCCTTGGAGCGAGATTCTTC+AGG | - | chr4_1:63450710-63450729 | None:intergenic | 55.0% | |
| GGCAGCAGCATTAACAGCCT+TGG | - | chr4_1:63450726-63450745 | None:intergenic | 55.0% | |
| GGCTGTTAATGCTGCTGCCA+TGG | + | chr4_1:63450727-63450746 | Msa0563150:CDS | 55.0% | |
| GTTAATGCTGCTGCCATGGC+TGG | + | chr4_1:63450731-63450750 | Msa0563150:CDS | 55.0% | |
| ACCAATTCCAGGACCAGCCA+TGG | - | chr4_1:63450747-63450766 | None:intergenic | 55.0% | |
| ! | CTGGAATTGGTCGTGCTGCT+GGG | + | chr4_1:63450756-63450775 | Msa0563150:CDS | 55.0% |
| !! | TGGGAGAGGTATTCCTCCTC+CGG | + | chr4_1:63450775-63450794 | Msa0563150:CDS | 55.0% |
| TGAATAACTGTCGCCGGAGG+AGG | - | chr4_1:63450791-63450810 | None:intergenic | 55.0% | |
| GCTTGAATAACTGTCGCCGG+AGG | - | chr4_1:63450794-63450813 | None:intergenic | 55.0% | |
| ATCTGCGGCTGCATCATACC+AGG | - | chr4_1:63450863-63450882 | None:intergenic | 55.0% | |
| GGACCACCAGGATACGAAAC+CGG | - | chr4_1:63450896-63450915 | None:intergenic | 55.0% | |
| GGATATGGCATCTGACCAGG+CGG | - | chr4_1:63450935-63450954 | None:intergenic | 55.0% | |
| CCTGGTCAGATGCCATATCC+CGG | + | chr4_1:63450935-63450954 | Msa0563150:CDS | 55.0% | |
| ATGCCATATCCCGGTATGCC+AGG | + | chr4_1:63450944-63450963 | Msa0563150:CDS | 55.0% | |
| GGTCTCGGAGGAGCAAATTG+CGG | - | chr4_1:63450998-63451017 | None:intergenic | 55.0% | |
| ! | CAATTTGCTCCTCCGAGACC+TGG | + | chr4_1:63450998-63451017 | Msa0563150:CDS | 55.0% |
| ATACCAAATTGCGGCGGAGG+AGG | - | chr4_1:63451028-63451047 | None:intergenic | 55.0% | |
| ! | GGAGGGGGCATACCAAATTG+CGG | - | chr4_1:63451037-63451056 | None:intergenic | 55.0% |
| CTCTGTCCAAACTGAGGAGG+GGG | - | chr4_1:63451052-63451071 | None:intergenic | 55.0% | |
| GGTCTCTGTCCAAACTGAGG+AGG | - | chr4_1:63451055-63451074 | None:intergenic | 55.0% | |
| TCATCTGTCCAGGAGGAGGT+GGG | - | chr4_1:63451084-63451103 | None:intergenic | 55.0% | |
| ATCATCTGTCCAGGAGGAGG+TGG | - | chr4_1:63451085-63451104 | None:intergenic | 55.0% | |
| CTCATCATCTGTCCAGGAGG+AGG | - | chr4_1:63451088-63451107 | None:intergenic | 55.0% | |
| CCTCTCATCATCTGTCCAGG+AGG | - | chr4_1:63451091-63451110 | None:intergenic | 55.0% | |
| CCTCCTGGACAGATGATGAG+AGG | + | chr4_1:63451088-63451107 | Msa0563150:CDS | 55.0% | |
| GGTCCTCTCATCATCTGTCC+AGG | - | chr4_1:63451094-63451113 | None:intergenic | 55.0% | |
| TGCATTCCAGGATGAGGAGG+AGG | - | chr4_1:63451115-63451134 | None:intergenic | 55.0% | |
| TCCTCCTCATCCTGGAATGC+AGG | + | chr4_1:63451114-63451133 | Msa0563150:CDS | 55.0% | |
| CCTCCTCATCCTGGAATGCA+GGG | + | chr4_1:63451115-63451134 | Msa0563150:CDS | 55.0% | |
| CTCCTCATCCTGGAATGCAG+GGG | + | chr4_1:63451116-63451135 | Msa0563150:CDS | 55.0% | |
| ACAGGAACACCACTACCAGG+AGG | - | chr4_1:63451163-63451182 | None:intergenic | 55.0% | |
| !! | TGCTGCTGATTTGGAGGAGG+GGG | - | chr4_1:63451211-63451230 | None:intergenic | 55.0% |
| !! | CTGCTGCTGATTTGGAGGAG+GGG | - | chr4_1:63451212-63451231 | None:intergenic | 55.0% |
| !! | GCTGCTGCTGATTTGGAGGA+GGG | - | chr4_1:63451213-63451232 | None:intergenic | 55.0% |
| !! | TGCTGCTGCTGATTTGGAGG+AGG | - | chr4_1:63451214-63451233 | None:intergenic | 55.0% |
| !! | TGCTGCTGCTGCTGATTTGG+AGG | - | chr4_1:63451217-63451236 | None:intergenic | 55.0% |
| GGAGTAGAAGGCCGAGTGTG+CGG | - | chr4_1:63450640-63450659 | None:intergenic | 60.0% | |
| CTTCGCCACGGAGGAGTAGA+AGG | - | chr4_1:63450652-63450671 | None:intergenic | 60.0% | |
| TCTACTCCTCCGTGGCGAAG+AGG | + | chr4_1:63450652-63450671 | Msa0563150:CDS | 60.0% | |
| ! | GCCATGGCTGGTCCTGGAAT+TGG | + | chr4_1:63450743-63450762 | Msa0563150:CDS | 60.0% |
| CCAGCAGCACGACCAATTCC+AGG | - | chr4_1:63450758-63450777 | None:intergenic | 60.0% | |
| CCTGGAATTGGTCGTGCTGC+TGG | + | chr4_1:63450755-63450774 | Msa0563150:CDS | 60.0% | |
| ! | ATTGGTCGTGCTGCTGGGAG+AGG | + | chr4_1:63450761-63450780 | Msa0563150:CDS | 60.0% |
| !! | CAAGCTCAGCCTGGTCTTGC+TGG | + | chr4_1:63450809-63450828 | Msa0563150:CDS | 60.0% |
| CGAACAGGACCAGCAAGACC+AGG | - | chr4_1:63450821-63450840 | None:intergenic | 60.0% | |
| GGTCTTGCTGGTCCTGTTCG+TGG | + | chr4_1:63450821-63450840 | Msa0563150:CDS | 60.0% | |
| GCTGGTCCTGTTCGTGGTGT+TGG | + | chr4_1:63450827-63450846 | Msa0563150:CDS | 60.0% | |
| ! | GGTCCTGTTCGTGGTGTTGG+TGG | + | chr4_1:63450830-63450849 | Msa0563150:CDS | 60.0% |
| GGTCCACCAACACCACGAAC+AGG | - | chr4_1:63450836-63450855 | None:intergenic | 60.0% | |
| GGCTGCATCATACCAGGAGC+AGG | - | chr4_1:63450857-63450876 | None:intergenic | 60.0% | |
| CCACCAGGATACGAAACCGG+CGG | - | chr4_1:63450893-63450912 | None:intergenic | 60.0% | |
| TATGGCATCTGACCAGGCGG+TGG | - | chr4_1:63450932-63450951 | None:intergenic | 60.0% | |
| CCGGGATATGGCATCTGACC+AGG | - | chr4_1:63450938-63450957 | None:intergenic | 60.0% | |
| CCACCTGGCATACCGGGATA+TGG | - | chr4_1:63450950-63450969 | None:intergenic | 60.0% | |
| CCATATCCCGGTATGCCAGG+TGG | + | chr4_1:63450947-63450966 | Msa0563150:CDS | 60.0% | |
| GGAGGAGCAAATTGCGGTGG+CGG | - | chr4_1:63450992-63451011 | None:intergenic | 60.0% | |
| CTCGGAGGAGCAAATTGCGG+TGG | - | chr4_1:63450995-63451014 | None:intergenic | 60.0% | |
| TTTGCTCCTCCGAGACCTGG+TGG | + | chr4_1:63451001-63451020 | Msa0563150:CDS | 60.0% | |
| GGCATACCAAATTGCGGCGG+AGG | - | chr4_1:63451031-63451050 | None:intergenic | 60.0% | |
| ! | GGGGGCATACCAAATTGCGG+CGG | - | chr4_1:63451034-63451053 | None:intergenic | 60.0% |
| GGTATGCCCCCTCCTCAGTT+TGG | + | chr4_1:63451043-63451062 | Msa0563150:CDS | 60.0% | |
| AGAGGACCTCCTCCTCATCC+TGG | + | chr4_1:63451106-63451125 | Msa0563150:CDS | 60.0% | |
| CCCTGCATTCCAGGATGAGG+AGG | - | chr4_1:63451118-63451137 | None:intergenic | 60.0% | |
| !! | ACCAGGAGGAGGAGGCATTC+CGG | - | chr4_1:63451149-63451168 | None:intergenic | 60.0% |
| ATGCCTCCTCCTCCTGGTAG+TGG | + | chr4_1:63451151-63451170 | Msa0563150:CDS | 60.0% | |
| ACACCACTACCAGGAGGAGG+AGG | - | chr4_1:63451157-63451176 | None:intergenic | 60.0% | |
| GGAACACCACTACCAGGAGG+AGG | - | chr4_1:63451160-63451179 | None:intergenic | 60.0% | |
| GGACGAGGTGGACCAAAGAC+AGG | - | chr4_1:63451181-63451200 | None:intergenic | 60.0% | |
| GTCTTTGGTCCACCTCGTCC+CGG | + | chr4_1:63451181-63451200 | Msa0563150:CDS | 60.0% | |
| ! | ATTTGGAGGAGGGGGCATGC+CGG | - | chr4_1:63451203-63451222 | None:intergenic | 60.0% |
| GGAGTAGAAGGCCGAGTGTG+CGG | - | chr4_1:63450640-63450659 | None:intergenic | 60.0% | |
| CTTCGCCACGGAGGAGTAGA+AGG | - | chr4_1:63450652-63450671 | None:intergenic | 60.0% | |
| TCTACTCCTCCGTGGCGAAG+AGG | + | chr4_1:63450652-63450671 | Msa0563150:CDS | 60.0% | |
| ! | GCCATGGCTGGTCCTGGAAT+TGG | + | chr4_1:63450743-63450762 | Msa0563150:CDS | 60.0% |
| CCAGCAGCACGACCAATTCC+AGG | - | chr4_1:63450758-63450777 | None:intergenic | 60.0% | |
| CCTGGAATTGGTCGTGCTGC+TGG | + | chr4_1:63450755-63450774 | Msa0563150:CDS | 60.0% | |
| ! | ATTGGTCGTGCTGCTGGGAG+AGG | + | chr4_1:63450761-63450780 | Msa0563150:CDS | 60.0% |
| !! | CAAGCTCAGCCTGGTCTTGC+TGG | + | chr4_1:63450809-63450828 | Msa0563150:CDS | 60.0% |
| CGAACAGGACCAGCAAGACC+AGG | - | chr4_1:63450821-63450840 | None:intergenic | 60.0% | |
| GGTCTTGCTGGTCCTGTTCG+TGG | + | chr4_1:63450821-63450840 | Msa0563150:CDS | 60.0% | |
| GCTGGTCCTGTTCGTGGTGT+TGG | + | chr4_1:63450827-63450846 | Msa0563150:CDS | 60.0% | |
| ! | GGTCCTGTTCGTGGTGTTGG+TGG | + | chr4_1:63450830-63450849 | Msa0563150:CDS | 60.0% |
| GGTCCACCAACACCACGAAC+AGG | - | chr4_1:63450836-63450855 | None:intergenic | 60.0% | |
| GGCTGCATCATACCAGGAGC+AGG | - | chr4_1:63450857-63450876 | None:intergenic | 60.0% | |
| CCACCAGGATACGAAACCGG+CGG | - | chr4_1:63450893-63450912 | None:intergenic | 60.0% | |
| TATGGCATCTGACCAGGCGG+TGG | - | chr4_1:63450932-63450951 | None:intergenic | 60.0% | |
| CCGGGATATGGCATCTGACC+AGG | - | chr4_1:63450938-63450957 | None:intergenic | 60.0% | |
| CCACCTGGCATACCGGGATA+TGG | - | chr4_1:63450950-63450969 | None:intergenic | 60.0% | |
| CCATATCCCGGTATGCCAGG+TGG | + | chr4_1:63450947-63450966 | Msa0563150:CDS | 60.0% | |
| GGAGGAGCAAATTGCGGTGG+CGG | - | chr4_1:63450992-63451011 | None:intergenic | 60.0% | |
| CTCGGAGGAGCAAATTGCGG+TGG | - | chr4_1:63450995-63451014 | None:intergenic | 60.0% | |
| TTTGCTCCTCCGAGACCTGG+TGG | + | chr4_1:63451001-63451020 | Msa0563150:CDS | 60.0% | |
| GGCATACCAAATTGCGGCGG+AGG | - | chr4_1:63451031-63451050 | None:intergenic | 60.0% | |
| ! | GGGGGCATACCAAATTGCGG+CGG | - | chr4_1:63451034-63451053 | None:intergenic | 60.0% |
| GGTATGCCCCCTCCTCAGTT+TGG | + | chr4_1:63451043-63451062 | Msa0563150:CDS | 60.0% | |
| AGAGGACCTCCTCCTCATCC+TGG | + | chr4_1:63451106-63451125 | Msa0563150:CDS | 60.0% | |
| CCCTGCATTCCAGGATGAGG+AGG | - | chr4_1:63451118-63451137 | None:intergenic | 60.0% | |
| !! | ACCAGGAGGAGGAGGCATTC+CGG | - | chr4_1:63451149-63451168 | None:intergenic | 60.0% |
| ATGCCTCCTCCTCCTGGTAG+TGG | + | chr4_1:63451151-63451170 | Msa0563150:CDS | 60.0% | |
| ACACCACTACCAGGAGGAGG+AGG | - | chr4_1:63451157-63451176 | None:intergenic | 60.0% | |
| GGAACACCACTACCAGGAGG+AGG | - | chr4_1:63451160-63451179 | None:intergenic | 60.0% | |
| GGACGAGGTGGACCAAAGAC+AGG | - | chr4_1:63451181-63451200 | None:intergenic | 60.0% | |
| GTCTTTGGTCCACCTCGTCC+CGG | + | chr4_1:63451181-63451200 | Msa0563150:CDS | 60.0% | |
| ! | ATTTGGAGGAGGGGGCATGC+CGG | - | chr4_1:63451203-63451222 | None:intergenic | 60.0% |
| GTCTTCACGGTCACCGTCGG+TGG | - | chr4_1:63450615-63450634 | None:intergenic | 65.0% | |
| GCGGTCTTCACGGTCACCGT+CGG | - | chr4_1:63450618-63450637 | None:intergenic | 65.0% | |
| CGAGTGTGCGGCGGTCTTCA+CGG | - | chr4_1:63450628-63450647 | None:intergenic | 65.0% | |
| CGTGAAGACCGCCGCACACT+CGG | + | chr4_1:63450626-63450645 | Msa0563150:CDS | 65.0% | |
| GTAGAAGGCCGAGTGTGCGG+CGG | - | chr4_1:63450637-63450656 | None:intergenic | 65.0% | |
| CTCGGCCTTCTACTCCTCCG+TGG | + | chr4_1:63450644-63450663 | Msa0563150:CDS | 65.0% | |
| !! | GGTGTTGGTGGACCTGCTCC+TGG | + | chr4_1:63450842-63450861 | Msa0563150:CDS | 65.0% |
| ACCGGCGGACGCGAAATCTG+CGG | - | chr4_1:63450878-63450897 | None:intergenic | 65.0% | |
| !! | CGTCCGCCGGTTTCGTATCC+TGG | + | chr4_1:63450887-63450906 | Msa0563150:CDS | 65.0% |
| !! | CCGCCGGTTTCGTATCCTGG+TGG | + | chr4_1:63450890-63450909 | Msa0563150:CDS | 65.0% |
| CGCATCACTGGAGGACCACC+AGG | - | chr4_1:63450908-63450927 | None:intergenic | 65.0% | |
| GGAGGACCACCTGGCATACC+GGG | - | chr4_1:63450956-63450975 | None:intergenic | 65.0% | |
| CGGAGGACCACCTGGCATAC+CGG | - | chr4_1:63450957-63450976 | None:intergenic | 65.0% | |
| !! | AATTGCGGTGGCGGACCACC+TGG | - | chr4_1:63450983-63451002 | None:intergenic | 65.0% |
| GGAGGAGGACCACCAGGTCT+CGG | - | chr4_1:63451013-63451032 | None:intergenic | 65.0% | |
| GGTCCTCCTCCGCCGCAATT+TGG | + | chr4_1:63451022-63451041 | Msa0563150:CDS | 65.0% | |
| GGCCCCTGCATTCCAGGATG+AGG | - | chr4_1:63451121-63451140 | None:intergenic | 65.0% | |
| !! | CCAGGAGGAGGAGGCATTCC+GGG | - | chr4_1:63451148-63451167 | None:intergenic | 65.0% |
| ! | TTTGGAGGAGGGGGCATGCC+GGG | - | chr4_1:63451202-63451221 | None:intergenic | 65.0% |
| GTCTTCACGGTCACCGTCGG+TGG | - | chr4_1:63450615-63450634 | None:intergenic | 65.0% | |
| GCGGTCTTCACGGTCACCGT+CGG | - | chr4_1:63450618-63450637 | None:intergenic | 65.0% | |
| CGAGTGTGCGGCGGTCTTCA+CGG | - | chr4_1:63450628-63450647 | None:intergenic | 65.0% | |
| CGTGAAGACCGCCGCACACT+CGG | + | chr4_1:63450626-63450645 | Msa0563150:CDS | 65.0% | |
| GTAGAAGGCCGAGTGTGCGG+CGG | - | chr4_1:63450637-63450656 | None:intergenic | 65.0% | |
| CTCGGCCTTCTACTCCTCCG+TGG | + | chr4_1:63450644-63450663 | Msa0563150:CDS | 65.0% | |
| !! | GGTGTTGGTGGACCTGCTCC+TGG | + | chr4_1:63450842-63450861 | Msa0563150:CDS | 65.0% |
| ACCGGCGGACGCGAAATCTG+CGG | - | chr4_1:63450878-63450897 | None:intergenic | 65.0% | |
| !! | CGTCCGCCGGTTTCGTATCC+TGG | + | chr4_1:63450887-63450906 | Msa0563150:CDS | 65.0% |
| !! | CCGCCGGTTTCGTATCCTGG+TGG | + | chr4_1:63450890-63450909 | Msa0563150:CDS | 65.0% |
| CGCATCACTGGAGGACCACC+AGG | - | chr4_1:63450908-63450927 | None:intergenic | 65.0% | |
| GGAGGACCACCTGGCATACC+GGG | - | chr4_1:63450956-63450975 | None:intergenic | 65.0% | |
| CGGAGGACCACCTGGCATAC+CGG | - | chr4_1:63450957-63450976 | None:intergenic | 65.0% | |
| !! | AATTGCGGTGGCGGACCACC+TGG | - | chr4_1:63450983-63451002 | None:intergenic | 65.0% |
| GGAGGAGGACCACCAGGTCT+CGG | - | chr4_1:63451013-63451032 | None:intergenic | 65.0% | |
| GGTCCTCCTCCGCCGCAATT+TGG | + | chr4_1:63451022-63451041 | Msa0563150:CDS | 65.0% | |
| GGCCCCTGCATTCCAGGATG+AGG | - | chr4_1:63451121-63451140 | None:intergenic | 65.0% | |
| !! | CCAGGAGGAGGAGGCATTCC+GGG | - | chr4_1:63451148-63451167 | None:intergenic | 65.0% |
| ! | TTTGGAGGAGGGGGCATGCC+GGG | - | chr4_1:63451202-63451221 | None:intergenic | 65.0% |
| ! | GCTGCTGCCATGGCTGGTCC+TGG | + | chr4_1:63450737-63450756 | Msa0563150:CDS | 70.0% |
| GCCGCAGATTTCGCGTCCGC+CGG | + | chr4_1:63450874-63450893 | Msa0563150:CDS | 70.0% | |
| GGCGGTGGACGCATCACTGG+AGG | - | chr4_1:63450917-63450936 | None:intergenic | 70.0% | |
| CCAGGCGGTGGACGCATCAC+TGG | - | chr4_1:63450920-63450939 | None:intergenic | 70.0% | |
| CCAGTGATGCGTCCACCGCC+TGG | + | chr4_1:63450917-63450936 | Msa0563150:CDS | 70.0% | |
| CCTGGTCTCGGAGGACCACC+TGG | - | chr4_1:63450965-63450984 | None:intergenic | 70.0% | |
| CCAGGTGGTCCTCCGAGACC+AGG | + | chr4_1:63450962-63450981 | Msa0563150:CDS | 70.0% | |
| GGTGGTCCTCCGAGACCAGG+TGG | + | chr4_1:63450965-63450984 | Msa0563150:CDS | 70.0% | |
| !! | GGTGGCGGACCACCTGGTCT+CGG | - | chr4_1:63450977-63450996 | None:intergenic | 70.0% |
| GGAGGACCACCAGGTCTCGG+AGG | - | chr4_1:63451010-63451029 | None:intergenic | 70.0% | |
| CCAGGAGGAGGTGGGCCCAT+AGG | - | chr4_1:63451076-63451095 | None:intergenic | 70.0% | |
| CCTATGGGCCCACCTCCTCC+TGG | + | chr4_1:63451073-63451092 | Msa0563150:CDS | 70.0% | |
| GGACGAGGCCCCTGCATTCC+AGG | - | chr4_1:63451127-63451146 | None:intergenic | 70.0% | |
| GGAATGCAGGGGCCTCGTCC+CGG | + | chr4_1:63451127-63451146 | Msa0563150:CDS | 70.0% | |
| !! | GGAGGAGGCATTCCGGGACG+AGG | - | chr4_1:63451142-63451161 | None:intergenic | 70.0% |
| CCCGGAATGCCTCCTCCTCC+TGG | + | chr4_1:63451145-63451164 | Msa0563150:CDS | 70.0% | |
| ! | GCTGCTGCCATGGCTGGTCC+TGG | + | chr4_1:63450737-63450756 | Msa0563150:CDS | 70.0% |
| GCCGCAGATTTCGCGTCCGC+CGG | + | chr4_1:63450874-63450893 | Msa0563150:CDS | 70.0% | |
| GGCGGTGGACGCATCACTGG+AGG | - | chr4_1:63450917-63450936 | None:intergenic | 70.0% | |
| CCAGGCGGTGGACGCATCAC+TGG | - | chr4_1:63450920-63450939 | None:intergenic | 70.0% | |
| CCAGTGATGCGTCCACCGCC+TGG | + | chr4_1:63450917-63450936 | Msa0563150:CDS | 70.0% | |
| CCTGGTCTCGGAGGACCACC+TGG | - | chr4_1:63450965-63450984 | None:intergenic | 70.0% | |
| CCAGGTGGTCCTCCGAGACC+AGG | + | chr4_1:63450962-63450981 | Msa0563150:CDS | 70.0% | |
| GGTGGTCCTCCGAGACCAGG+TGG | + | chr4_1:63450965-63450984 | Msa0563150:CDS | 70.0% | |
| !! | GGTGGCGGACCACCTGGTCT+CGG | - | chr4_1:63450977-63450996 | None:intergenic | 70.0% |
| GGAGGACCACCAGGTCTCGG+AGG | - | chr4_1:63451010-63451029 | None:intergenic | 70.0% | |
| CCAGGAGGAGGTGGGCCCAT+AGG | - | chr4_1:63451076-63451095 | None:intergenic | 70.0% | |
| CCTATGGGCCCACCTCCTCC+TGG | + | chr4_1:63451073-63451092 | Msa0563150:CDS | 70.0% | |
| GGACGAGGCCCCTGCATTCC+AGG | - | chr4_1:63451127-63451146 | None:intergenic | 70.0% | |
| GGAATGCAGGGGCCTCGTCC+CGG | + | chr4_1:63451127-63451146 | Msa0563150:CDS | 70.0% | |
| !! | GGAGGAGGCATTCCGGGACG+AGG | - | chr4_1:63451142-63451161 | None:intergenic | 70.0% |
| CCCGGAATGCCTCCTCCTCC+TGG | + | chr4_1:63451145-63451164 | Msa0563150:CDS | 70.0% | |
| GGCGGACCACCTGGTCTCGG+AGG | - | chr4_1:63450974-63450993 | None:intergenic | 75.0% | |
| TGCGGCGGAGGAGGACCACC+AGG | - | chr4_1:63451019-63451038 | None:intergenic | 75.0% | |
| GGCGGACCACCTGGTCTCGG+AGG | - | chr4_1:63450974-63450993 | None:intergenic | 75.0% | |
| TGCGGCGGAGGAGGACCACC+AGG | - | chr4_1:63451019-63451038 | None:intergenic | 75.0% | |
| !! | GGGGGCATGCCGGGACGAGG+TGG | - | chr4_1:63451193-63451212 | None:intergenic | 80.0% |
| !! | GGAGGGGGCATGCCGGGACG+AGG | - | chr4_1:63451196-63451215 | None:intergenic | 80.0% |
| !! | GGGGGCATGCCGGGACGAGG+TGG | - | chr4_1:63451193-63451212 | None:intergenic | 80.0% |
| !! | GGAGGGGGCATGCCGGGACG+AGG | - | chr4_1:63451196-63451215 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 63450437 | 63451246 | 63450437 | ID=Msa0563150;Name=Msa0563150 |
| chr4_1 | mRNA | 63450437 | 63451246 | 63450437 | ID=Msa0563150-mRNA-1;Parent=Msa0563150;Name=Msa0563150-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|-1|0|1|-1|1|1|0|269 |
| chr4_1 | exon | 63450437 | 63451246 | 63450437 | ID=Msa0563150-mRNA-1:exon:20116;Parent=Msa0563150-mRNA-1 |
| chr4_1 | CDS | 63450437 | 63451246 | 63450437 | ID=Msa0563150-mRNA-1:cds;Parent=Msa0563150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
