Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082010 | XP_039684256.1 | 98.367 | 245 | 4 | 0 | 1 | 245 | 1 | 245 | 4.10e-177 | 496 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082010 | sp|Q39244|RU1A_ARATH | 73.171 | 246 | 57 | 4 | 2 | 245 | 12 | 250 | 3.22e-123 | 353 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082010 | B7FJ52 | 97.959 | 245 | 5 | 0 | 1 | 245 | 1 | 245 | 7.98e-177 | 495 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1036880 | Msa1082010 | 0.864304 | 1.339308e-64 | -8.615850e-47 |
| Msa1082010 | Msa1115190 | 0.804881 | 1.745812e-49 | -8.615850e-47 |
| Msa1082010 | Msa1366590 | 0.879980 | 7.997371e-70 | -8.615850e-47 |
| Msa0563150 | Msa1082010 | 0.813406 | 2.600813e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082010 | MtrunA17_Chr4g0044291 | 97.551 | 245 | 5 | 1 | 1 | 245 | 1 | 244 | 3.82e-178 | 489 |
| Msa1082010 | MtrunA17_Chr7g0269401 | 98.742 | 159 | 2 | 0 | 87 | 245 | 3 | 161 | 5.49e-114 | 323 |
| Msa1082010 | MtrunA17_Chr5g0432171 | 60.338 | 237 | 83 | 4 | 11 | 245 | 7 | 234 | 1.99e-88 | 261 |
| Msa1082010 | MtrunA17_Chr1g0176901 | 58.065 | 186 | 68 | 3 | 61 | 245 | 2 | 178 | 2.28e-61 | 191 |
| Msa1082010 | MtrunA17_Chr7g0269411 | 94.505 | 91 | 5 | 0 | 1 | 91 | 1 | 91 | 3.90e-59 | 182 |
| Msa1082010 | MtrunA17_Chr4g0044321 | 88.298 | 94 | 11 | 0 | 1 | 94 | 1 | 94 | 4.86e-51 | 172 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1082010 | AT2G47580.1 | 73.171 | 246 | 57 | 4 | 2 | 245 | 12 | 250 | 3.27e-124 | 353 |
| Msa1082010 | AT2G30260.1 | 58.475 | 236 | 87 | 3 | 11 | 245 | 7 | 232 | 6.15e-98 | 286 |
| Msa1082010 | AT1G06960.1 | 57.203 | 236 | 87 | 3 | 11 | 245 | 7 | 229 | 1.72e-89 | 264 |
| Msa1082010 | AT1G06960.3 | 56.522 | 207 | 76 | 3 | 40 | 245 | 7 | 200 | 6.15e-75 | 226 |
| Msa1082010 | AT2G30260.2 | 59.504 | 121 | 49 | 0 | 11 | 131 | 7 | 127 | 2.95e-50 | 162 |
| Msa1082010 | AT1G06960.4 | 53.125 | 160 | 61 | 3 | 87 | 245 | 4 | 150 | 2.38e-47 | 154 |
| Msa1082010 | AT1G06960.2 | 58.120 | 117 | 40 | 1 | 11 | 118 | 7 | 123 | 1.58e-44 | 147 |
| Msa1082010 | AT1G06960.5 | 65.979 | 97 | 33 | 0 | 11 | 107 | 7 | 103 | 7.99e-44 | 145 |
| Msa1082010 | AT1G06960.6 | 57.471 | 87 | 28 | 1 | 40 | 117 | 7 | 93 | 3.26e-30 | 110 |
Find 79 sgRNAs with CRISPR-Local
Find 393 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAATAGTTTATCTTCTTAA+TGG | 0.142279 | 7_2:-81931190 | Msa1082010:three_prime_UTR |
| TATCATGGTAAATTACTATT+TGG | 0.200677 | 7_2:-81931066 | Msa1082010:three_prime_UTR |
| GGAATTGCCTTTGTGGAATA+TGG | 0.226538 | 7_2:-81931384 | Msa1082010:CDS |
| CACCGCCCGGATAAGGTATC+TGG | 0.248229 | 7_2:+81931556 | None:intergenic |
| TGAATAAAGAGAATATTATT+TGG | 0.260734 | 7_2:+81931501 | None:intergenic |
| AGCTTCTCCGGCTGGCTCAT+AGG | 0.273692 | 7_2:-81936216 | Msa1082010:five_prime_UTR |
| AGATAAACTATTGCATTAGA+TGG | 0.290629 | 7_2:+81931199 | None:intergenic |
| CTTCTGCTTCTAATGCTCTT+AGG | 0.307963 | 7_2:-81935848 | Msa1082010:CDS |
| GCCTTTCTTGCAACATTAGT+TGG | 0.336989 | 7_2:+81931255 | None:intergenic |
| TACCATGGGCTTATCATAGA+AGG | 0.348156 | 7_2:+81935809 | None:intergenic |
| ACCCGCAGCAGCCTTGGTTC+TGG | 0.361545 | 7_2:-81931161 | Msa1082010:three_prime_UTR |
| CAGCTAAATTAGCGTCGTTT+TGG | 0.367566 | 7_2:+81931911 | None:intergenic |
| TCCAACTAATGTTGCAAGAA+AGG | 0.373108 | 7_2:-81931256 | Msa1082010:three_prime_UTR |
| GATATCCCAGATACCTTATC+CGG | 0.378539 | 7_2:-81931562 | Msa1082010:CDS |
| CCTGCTTATGCTGGTGGTTA+CGG | 0.390910 | 7_2:-81931874 | Msa1082010:CDS |
| CACCAGCATAAGCAGGATTT+AGG | 0.401811 | 7_2:+81931881 | None:intergenic |
| TATTCCACAAAGGCAATTCC+TGG | 0.402314 | 7_2:+81931387 | None:intergenic |
| ATGCTGTTTCTTCAATATCC+TGG | 0.406930 | 7_2:-81931441 | Msa1082010:CDS |
| TTTCAAGACTCTGAAACATA+AGG | 0.428186 | 7_2:-81935901 | Msa1082010:CDS |
| GACTTTGCACCGCCCGGATA+AGG | 0.431492 | 7_2:+81931549 | None:intergenic |
| CTGTTTACCCGCAGCAGCCT+TGG | 0.433204 | 7_2:-81931167 | Msa1082010:three_prime_UTR |
| TTTGCATAAGTTATCAACAT+AGG | 0.436644 | 7_2:+81931297 | None:intergenic |
| TTTGGTGGTGCAGGAGCCTC+AGG | 0.448624 | 7_2:+81931519 | None:intergenic |
| GACGCTAATTTAGCTGGAAC+TGG | 0.449548 | 7_2:-81931904 | Msa1082010:CDS |
| CGGCAAAGGGTTAGCTTCTC+CGG | 0.456908 | 7_2:-81936228 | Msa1082010:five_prime_UTR |
| GCAATCCACAGTGGCTATGC+AGG | 0.457768 | 7_2:-81931352 | Msa1082010:CDS |
| AGAATATTATTTGGTGGTGC+AGG | 0.462021 | 7_2:+81931510 | None:intergenic |
| GCTTCTCCGGCTGGCTCATA+GGG | 0.470630 | 7_2:-81936215 | Msa1082010:five_prime_UTR |
| TCTTCAATATCCTGGATTCA+AGG | 0.474103 | 7_2:-81931433 | Msa1082010:CDS |
| GTTGAGGTTGTTGATGTAGA+TGG | 0.478062 | 7_2:+81936085 | None:intergenic |
| TTGCATAAGTTATCAACATA+GGG | 0.478071 | 7_2:+81931298 | None:intergenic |
| ATCATGGGAGTGGTCTCGTT+GGG | 0.478382 | 7_2:+81931471 | None:intergenic |
| CAAAACGACGCTAATTTAGC+TGG | 0.481431 | 7_2:-81931910 | Msa1082010:CDS |
| TAAGCCAGGAATTGCCTTTG+TGG | 0.487844 | 7_2:-81931391 | Msa1082010:CDS |
| TGGATTCAAGGAAGTTAGAA+TGG | 0.488429 | 7_2:-81931421 | Msa1082010:CDS |
| GAAACATAAGGGTCAAGCTT+GGG | 0.490093 | 7_2:-81935889 | Msa1082010:CDS |
| AAAGGGTTAGCTTCTCCGGC+TGG | 0.494890 | 7_2:-81936224 | Msa1082010:five_prime_UTR |
| TTCAAGACTCTGAAACATAA+GGG | 0.501324 | 7_2:-81935900 | Msa1082010:CDS |
| ATTCTAACTTCCTTGAATCC+AGG | 0.502372 | 7_2:+81931423 | None:intergenic |
| GGCCTAAATCCTGCTTATGC+TGG | 0.504297 | 7_2:-81931883 | Msa1082010:CDS |
| AGAGTGAGGTTCTTCACGAC+GGG | 0.507364 | 7_2:+81936181 | None:intergenic |
| TGCAGAGAATACAGTATGCC+AGG | 0.509126 | 7_2:-81932488 | Msa1082010:intron |
| AGAATGGTTGAAGCTAAGCC+AGG | 0.509824 | 7_2:-81931405 | Msa1082010:CDS |
| AGCAAGGACTTTGCACCGCC+CGG | 0.516963 | 7_2:+81931543 | None:intergenic |
| ACCATGGGCTTATCATAGAA+GGG | 0.521161 | 7_2:+81935810 | None:intergenic |
| ACTAATGTTGCAAGAAAGGC+AGG | 0.522718 | 7_2:-81931252 | Msa1082010:three_prime_UTR |
| AAACAGCATTTGAAGCATCA+TGG | 0.523248 | 7_2:+81931455 | None:intergenic |
| ACCAGAACCAAGGCTGCTGC+GGG | 0.528112 | 7_2:+81931160 | None:intergenic |
| AACAGCATTTGAAGCATCAT+GGG | 0.537484 | 7_2:+81931456 | None:intergenic |
| TGAAACATAAGGGTCAAGCT+TGG | 0.538887 | 7_2:-81935890 | Msa1082010:CDS |
| CATCATGGGAGTGGTCTCGT+TGG | 0.539108 | 7_2:+81931470 | None:intergenic |
| GTGGCTATGCAGGCGCTGCA+AGG | 0.546739 | 7_2:-81931342 | Msa1082010:CDS |
| CGAAGATGAAAGAGAGAGTG+AGG | 0.551277 | 7_2:+81936167 | None:intergenic |
| ATAAAGAGAATATTATTTGG+TGG | 0.560203 | 7_2:+81931504 | None:intergenic |
| TACCAGAACCAAGGCTGCTG+CGG | 0.562673 | 7_2:+81931159 | None:intergenic |
| CTAAATCCTGCTTATGCTGG+TGG | 0.563875 | 7_2:-81931880 | Msa1082010:CDS |
| CCGTAACCACCAGCATAAGC+AGG | 0.564623 | 7_2:+81931874 | None:intergenic |
| TGCAGGAGCCTCAGGTAGCA+AGG | 0.570195 | 7_2:+81931527 | None:intergenic |
| CATTTGAAGCATCATGGGAG+TGG | 0.573182 | 7_2:+81931461 | None:intergenic |
| TATGACATCAGATTTAGTCC+TGG | 0.590587 | 7_2:+81932470 | None:intergenic |
| CCCCTTCTATGATAAGCCCA+TGG | 0.593341 | 7_2:-81935811 | Msa1082010:intron |
| TCGAAATCTCAACACAAACA+TGG | 0.593765 | 7_2:-81936147 | Msa1082010:exon |
| TCAATTTGGGAAGATACTTG+AGG | 0.598924 | 7_2:-81935931 | Msa1082010:CDS |
| CGAAAGAGGCACGATGACAA+AGG | 0.607215 | 7_2:-81932411 | Msa1082010:intron |
| ACCGCCCGGATAAGGTATCT+GGG | 0.612135 | 7_2:+81931557 | None:intergenic |
| TGCAAAGTCCTTGCTACCTG+AGG | 0.615525 | 7_2:-81931535 | Msa1082010:CDS |
| AATGCTCTTAGGCAAATGCA+AGG | 0.618597 | 7_2:-81935837 | Msa1082010:CDS |
| GGTAAACCCTATGAGCCAGC+CGG | 0.619652 | 7_2:+81936209 | None:intergenic |
| ATATCCCAGATACCTTATCC+GGG | 0.627420 | 7_2:-81931561 | Msa1082010:CDS |
| GAGAGTGAGGTTCTTCACGA+CGG | 0.628296 | 7_2:+81936180 | None:intergenic |
| CAGCGCCTGCATAGCCACTG+TGG | 0.631864 | 7_2:+81931347 | None:intergenic |
| CCATGGGCTTATCATAGAAG+GGG | 0.644197 | 7_2:+81935811 | None:intergenic |
| CTCATCTCCATATTCCACAA+AGG | 0.648390 | 7_2:+81931377 | None:intergenic |
| CTACAATCATACCAGAACCA+AGG | 0.676209 | 7_2:+81931150 | None:intergenic |
| GATGTCATAGCAAAAGCAGA+CGG | 0.699134 | 7_2:-81932456 | Msa1082010:CDS |
| GAGTGAGGTTCTTCACGACG+GGG | 0.717694 | 7_2:+81936182 | None:intergenic |
| AGTGAGGTTCTTCACGACGG+GGG | 0.717916 | 7_2:+81936183 | None:intergenic |
| TCCCAGATACCTTATCCGGG+CGG | 0.737198 | 7_2:-81931558 | Msa1082010:CDS |
| AGATGAGATGCAATCCACAG+TGG | 0.772288 | 7_2:-81931361 | Msa1082010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAAAAATAAATAAATTA+CGG | - | chr7_2:81932952-81932971 | Msa1082010:intron | 0.0% |
| !!! | TGTATTTTTAATTTGATTTA+AGG | - | chr7_2:81931414-81931433 | Msa1082010:CDS | 10.0% |
| !! | CTAATGAAAAATTGATATTA+TGG | + | chr7_2:81931135-81931154 | None:intergenic | 15.0% |
| !!! | TTTTTTCTGTTAGAATTTTT+TGG | - | chr7_2:81931450-81931469 | Msa1082010:CDS | 15.0% |
| !!! | TTTTTCTGTTAGAATTTTTT+GGG | - | chr7_2:81931451-81931470 | Msa1082010:CDS | 15.0% |
| !!! | TTCTATCATAAAACATATTT+TGG | + | chr7_2:81931973-81931992 | None:intergenic | 15.0% |
| !! | ATTAAGTTACATAAATTTCA+AGG | + | chr7_2:81932288-81932307 | None:intergenic | 15.0% |
| !! | TTAAATTACATTTATAGTGA+AGG | + | chr7_2:81932890-81932909 | None:intergenic | 15.0% |
| !! | TTCACTATAAATGTAATTTA+AGG | - | chr7_2:81932889-81932908 | Msa1082010:intron | 15.0% |
| !! | TCACTATAAATGTAATTTAA+GGG | - | chr7_2:81932890-81932909 | Msa1082010:intron | 15.0% |
| !!! | TGATTTAACAAAACATTTTA+TGG | + | chr7_2:81932981-81933000 | None:intergenic | 15.0% |
| !! | ATATGTATATCTACTAAAAA+GGG | + | chr7_2:81933514-81933533 | None:intergenic | 15.0% |
| !! | AATATGTATATCTACTAAAA+AGG | + | chr7_2:81933515-81933534 | None:intergenic | 15.0% |
| !! | AAATAAAATTATGTGATGTA+TGG | - | chr7_2:81933791-81933810 | Msa1082010:intron | 15.0% |
| !!! | CTCTCTATATTTTTTTTTTA+AGG | - | chr7_2:81934787-81934806 | Msa1082010:intron | 15.0% |
| !! | AAAAAACCTAAGAAATATAT+TGG | + | chr7_2:81934927-81934946 | None:intergenic | 15.0% |
| !! | GCATAAAAAATATCATTTAT+TGG | + | chr7_2:81935064-81935083 | None:intergenic | 15.0% |
| !! | TGAATAAAGAGAATATTATT+TGG | + | chr7_2:81935663-81935682 | None:intergenic | 15.0% |
| !! | TTCTTATAAAAATCTGTATT+TGG | - | chr7_2:81936054-81936073 | Msa1082010:intron | 15.0% |
| !!! | ATTGTTATCTTTTTTTATCA+TGG | - | chr7_2:81936080-81936099 | Msa1082010:CDS | 15.0% |
| !!! | TTAATTTGATTTAAGGTAGT+AGG | - | chr7_2:81931421-81931440 | Msa1082010:CDS | 20.0% |
| !!! | GTTTCTCTTATAATTTTTCT+AGG | + | chr7_2:81931917-81931936 | None:intergenic | 20.0% |
| !!! | TTAACTAAGTGTTTTGTTTT+TGG | - | chr7_2:81932260-81932279 | Msa1082010:intron | 20.0% |
| !!! | TAACTAAGTGTTTTGTTTTT+GGG | - | chr7_2:81932261-81932280 | Msa1082010:intron | 20.0% |
| !! | GTAAGAAGAAGAATATATTT+AGG | + | chr7_2:81932466-81932485 | None:intergenic | 20.0% |
| !!! | AAATAGGAAGATATTTTTCT+TGG | - | chr7_2:81932649-81932668 | Msa1082010:intron | 20.0% |
| !!! | TATTTTTCTTGGAATGATAA+TGG | - | chr7_2:81932660-81932679 | Msa1082010:intron | 20.0% |
| !! | AGAAAAAAAGTCATGATAAA+TGG | + | chr7_2:81933031-81933050 | None:intergenic | 20.0% |
| !!! | ATACTCTTATTTGATGTTAA+GGG | + | chr7_2:81933107-81933126 | None:intergenic | 20.0% |
| !! | AATATATCTTGATGTACATT+TGG | - | chr7_2:81933148-81933167 | Msa1082010:intron | 20.0% |
| !! | ATATATCTTGATGTACATTT+GGG | - | chr7_2:81933149-81933168 | Msa1082010:intron | 20.0% |
| !! | ATTCAACAAAATTATAGTGA+AGG | + | chr7_2:81933378-81933397 | None:intergenic | 20.0% |
| !! | TACTAAAAAGGGAATATATT+GGG | + | chr7_2:81933503-81933522 | None:intergenic | 20.0% |
| !! | ACAAATCAAGCAATTATTAT+CGG | + | chr7_2:81933912-81933931 | None:intergenic | 20.0% |
| !! | AGATTTGAAAAATATCAAAC+AGG | + | chr7_2:81934018-81934037 | None:intergenic | 20.0% |
| !!! | AAACAAATCTATTTTAGCAT+GGG | + | chr7_2:81934081-81934100 | None:intergenic | 20.0% |
| !!! | ATAGATTAGAGATTTGTTAT+GGG | + | chr7_2:81934282-81934301 | None:intergenic | 20.0% |
| !!! | AATAGATTAGAGATTTGTTA+TGG | + | chr7_2:81934283-81934302 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTGTTGATGTTGT+CGG | - | chr7_2:81934950-81934969 | Msa1082010:intron | 20.0% |
| !! | TAATACATTAACAATGAAGA+AGG | - | chr7_2:81935031-81935050 | Msa1082010:intron | 20.0% |
| !!! | TTGTAGTTTATTTTAGACAA+TGG | - | chr7_2:81935339-81935358 | Msa1082010:intron | 20.0% |
| !!! | TCATAATTTTAACCGTTTTA+TGG | - | chr7_2:81935417-81935436 | Msa1082010:intron | 20.0% |
| !! | ATAAAGAGAATATTATTTGG+TGG | + | chr7_2:81935660-81935679 | None:intergenic | 20.0% |
| !! | TATCATGGTAAATTACTATT+TGG | - | chr7_2:81936095-81936114 | Msa1082010:CDS | 20.0% |
| !!! | CAGATTTATTTTACATTTTC+TGG | - | chr7_2:81936135-81936154 | Msa1082010:exon | 20.0% |
| ! | AACGAAAAAATCAAAATCGA+CGG | - | chr7_2:81931096-81931115 | Msa1082010:three_prime_UTR | 25.0% |
| !!! | TTTTGTTTTCTCAAATCCAA+TGG | + | chr7_2:81931606-81931625 | None:intergenic | 25.0% |
| ! | TTGGATTTGAGAAAACAAAA+AGG | - | chr7_2:81931606-81931625 | Msa1082010:intron | 25.0% |
| ! | GAAAACAAAAAGGAATGTTT+CGG | - | chr7_2:81931616-81931635 | Msa1082010:intron | 25.0% |
| !! | ATTGTGTTCTATGCTATTTA+TGG | - | chr7_2:81931794-81931813 | Msa1082010:intron | 25.0% |
| ! | AGATTTAGAGATTAATGAGT+TGG | - | chr7_2:81931946-81931965 | Msa1082010:intron | 25.0% |
| !!! | AACTAAGTGTTTTGTTTTTG+GGG | - | chr7_2:81932262-81932281 | Msa1082010:intron | 25.0% |
| ! | ATTCAACAAAATTATAGCGA+AGG | + | chr7_2:81932336-81932355 | None:intergenic | 25.0% |
| ! | AGAAGAAGAATATATTTAGG+TGG | + | chr7_2:81932463-81932482 | None:intergenic | 25.0% |
| ! | AACAAAGAGAATTTATTCCA+CGG | + | chr7_2:81932591-81932610 | None:intergenic | 25.0% |
| !! | TATTTTGTTCATTGAGTGTA+GGG | + | chr7_2:81932634-81932653 | None:intergenic | 25.0% |
| ! | TTGATCAAAATTGAACTTGA+TGG | + | chr7_2:81932786-81932805 | None:intergenic | 25.0% |
| !! | ATGTAATTTAAGGGTATGTT+AGG | - | chr7_2:81932899-81932918 | Msa1082010:intron | 25.0% |
| !! | CATACTCTTATTTGATGTTA+AGG | + | chr7_2:81933108-81933127 | None:intergenic | 25.0% |
| ! | CTTAACATCAAATAAGAGTA+TGG | - | chr7_2:81933106-81933125 | Msa1082010:intron | 25.0% |
| !! | AAATAAGAGTATGGTTTAGA+GGG | - | chr7_2:81933115-81933134 | Msa1082010:intron | 25.0% |
| ! | AAGATTGACCATTAATACAT+AGG | - | chr7_2:81933441-81933460 | Msa1082010:intron | 25.0% |
| ! | ACTAAAAAGGGAATATATTG+GGG | + | chr7_2:81933502-81933521 | None:intergenic | 25.0% |
| ! | CTACTAAAAAGGGAATATAT+TGG | + | chr7_2:81933504-81933523 | None:intergenic | 25.0% |
| !! | AAAAAATTGTTGTGTTGTTG+TGG | - | chr7_2:81933567-81933586 | Msa1082010:intron | 25.0% |
| ! | CAATTAAAATAAAGCTCCAA+CGG | + | chr7_2:81933936-81933955 | None:intergenic | 25.0% |
| !!! | ATTTTAATTGGTCATATGCA+TGG | - | chr7_2:81933946-81933965 | Msa1082010:intron | 25.0% |
| ! | ACGAAAAATAACACATATCA+CGG | + | chr7_2:81933985-81934004 | None:intergenic | 25.0% |
| !!! | AACAAATCTATTTTAGCATG+GGG | + | chr7_2:81934080-81934099 | None:intergenic | 25.0% |
| !!! | CAAACAAATCTATTTTAGCA+TGG | + | chr7_2:81934082-81934101 | None:intergenic | 25.0% |
| !! | CATGCTAAAATAGATTTGTT+TGG | - | chr7_2:81934080-81934099 | Msa1082010:intron | 25.0% |
| !!! | TAGATTAGAGATTTGTTATG+GGG | + | chr7_2:81934281-81934300 | None:intergenic | 25.0% |
| ! | TTATTAATTGGTATCACAAC+TGG | + | chr7_2:81934379-81934398 | None:intergenic | 25.0% |
| ! | GTGCTTAGATACTTATTAAT+TGG | + | chr7_2:81934391-81934410 | None:intergenic | 25.0% |
| !! | CTTTGATAGATAGCTTTTAA+GGG | + | chr7_2:81934426-81934445 | None:intergenic | 25.0% |
| ! | CTTAAAAGCTATCTATCAAA+GGG | - | chr7_2:81934425-81934444 | Msa1082010:intron | 25.0% |
| ! | TTAAAAGCTATCTATCAAAG+GGG | - | chr7_2:81934426-81934445 | Msa1082010:intron | 25.0% |
| ! | TTGTCTATATCACAATATGA+GGG | + | chr7_2:81934539-81934558 | None:intergenic | 25.0% |
| !!! | AACTTTTTGTTTTGTCTGTT+TGG | - | chr7_2:81934562-81934581 | Msa1082010:intron | 25.0% |
| ! | ATTTCCATAAAACTATTCTC+AGG | - | chr7_2:81934621-81934640 | Msa1082010:intron | 25.0% |
| ! | TGTTAAGTTTAAGCTCATAT+TGG | - | chr7_2:81934819-81934838 | Msa1082010:intron | 25.0% |
| !!! | TTTTTTTTGTTGATGTTGTC+GGG | - | chr7_2:81934951-81934970 | Msa1082010:intron | 25.0% |
| !! | GCAACTCTTTTAATGAATAT+CGG | - | chr7_2:81935147-81935166 | Msa1082010:intron | 25.0% |
| !!! | TATCCAATTACATTTTTCAG+CGG | - | chr7_2:81935211-81935230 | Msa1082010:intron | 25.0% |
| ! | TTAGACAATGGTCATATTAT+AGG | - | chr7_2:81935351-81935370 | Msa1082010:intron | 25.0% |
| ! | CGAGAAAAAATACCATAAAA+CGG | + | chr7_2:81935432-81935451 | None:intergenic | 25.0% |
| ! | TTGCATAAGTTATCAACATA+GGG | + | chr7_2:81935866-81935885 | None:intergenic | 25.0% |
| ! | TTTGCATAAGTTATCAACAT+AGG | + | chr7_2:81935867-81935886 | None:intergenic | 25.0% |
| ! | AGATAAACTATTGCATTAGA+TGG | + | chr7_2:81935965-81935984 | None:intergenic | 25.0% |
| ! | GCAATAGTTTATCTTCTTAA+TGG | - | chr7_2:81935971-81935990 | Msa1082010:intron | 25.0% |
| !!! | CGATTTTGATTTTTTCGTTG+AGG | + | chr7_2:81931095-81931114 | None:intergenic | 30.0% |
| !! | TTTCAAGACTCTGAAACATA+AGG | - | chr7_2:81931260-81931279 | Msa1082010:three_prime_UTR | 30.0% |
| !! | TTCAAGACTCTGAAACATAA+GGG | - | chr7_2:81931261-81931280 | Msa1082010:three_prime_UTR | 30.0% |
| AACAATCTTCAACATGACAT+AGG | - | chr7_2:81931535-81931554 | Msa1082010:CDS | 30.0% | |
| ! | TTCTCTAGCTGAATTTTGTT+TGG | - | chr7_2:81931559-81931578 | Msa1082010:CDS | 30.0% |
| TAGAATAGTTAACATGCCAT+TGG | - | chr7_2:81931587-81931606 | Msa1082010:intron | 30.0% | |
| CTCCTCTATAGATATTATGT+TGG | - | chr7_2:81931676-81931695 | Msa1082010:intron | 30.0% | |
| GACCAACATAATATCTATAG+AGG | + | chr7_2:81931681-81931700 | None:intergenic | 30.0% | |
| TTGCTAAATGAAAATGCAGA+AGG | - | chr7_2:81931701-81931720 | Msa1082010:intron | 30.0% | |
| ! | GAATAGGGAGATATTTTTCT+TGG | - | chr7_2:81932115-81932134 | Msa1082010:intron | 30.0% |
| ! | TATTTTTCTTGGAAGGATAG+TGG | - | chr7_2:81932126-81932145 | Msa1082010:intron | 30.0% |
| TATTCTTCTTCTTACTGTGA+AGG | - | chr7_2:81932471-81932490 | Msa1082010:CDS | 30.0% | |
| ! | ATTTTGTTCATTGAGTGTAG+GGG | + | chr7_2:81932633-81932652 | None:intergenic | 30.0% |
| ! | CTATTTTGTTCATTGAGTGT+AGG | + | chr7_2:81932635-81932654 | None:intergenic | 30.0% |
| CTACACTCAATGAACAAAAT+AGG | - | chr7_2:81932633-81932652 | Msa1082010:intron | 30.0% | |
| AAATAGTAAAACTGATGCCA+AGG | - | chr7_2:81932715-81932734 | Msa1082010:intron | 30.0% | |
| TAAATATGACAAGTCGTACT+CGG | + | chr7_2:81932746-81932765 | None:intergenic | 30.0% | |
| ! | AATTTAAGGGTATGTTAGGA+TGG | - | chr7_2:81932903-81932922 | Msa1082010:intron | 30.0% |
| ! | CAAATAAGAGTATGGTTTAG+AGG | - | chr7_2:81933114-81933133 | Msa1082010:intron | 30.0% |
| !! | TTAGCCTTTTTGTCTTTGAT+TGG | - | chr7_2:81933397-81933416 | Msa1082010:intron | 30.0% |
| ! | TAGCCTTTTTGTCTTTGATT+GGG | - | chr7_2:81933398-81933417 | Msa1082010:intron | 30.0% |
| TTACCCAATCAAAGACAAAA+AGG | + | chr7_2:81933404-81933423 | None:intergenic | 30.0% | |
| TGTATTAATGGTCAATCTTG+TGG | + | chr7_2:81933440-81933459 | None:intergenic | 30.0% | |
| ATTGACCATTAATACATAGG+CGG | - | chr7_2:81933444-81933463 | Msa1082010:intron | 30.0% | |
| AATCTTTGAATCACGACTTT+GGG | + | chr7_2:81933644-81933663 | None:intergenic | 30.0% | |
| AAATCTTTGAATCACGACTT+TGG | + | chr7_2:81933645-81933664 | None:intergenic | 30.0% | |
| TGTTGTGAACAACTACTAAT+AGG | - | chr7_2:81933703-81933722 | Msa1082010:intron | 30.0% | |
| TGATGTATGGTCTATCTTAA+TGG | - | chr7_2:81933804-81933823 | Msa1082010:intron | 30.0% | |
| !!! | CGTTGGAGCTTTATTTTAAT+TGG | - | chr7_2:81933934-81933953 | Msa1082010:intron | 30.0% |
| CGAAAAATAACACATATCAC+GGG | + | chr7_2:81933984-81934003 | None:intergenic | 30.0% | |
| !!! | ATATGTGTTATTTTTCGTGC+TGG | - | chr7_2:81933987-81934006 | Msa1082010:intron | 30.0% |
| AGAGAAAAAATTCATGTTGC+TGG | + | chr7_2:81934041-81934060 | None:intergenic | 30.0% | |
| !!! | ACAAATCTATTTTAGCATGG+GGG | + | chr7_2:81934079-81934098 | None:intergenic | 30.0% |
| AGACAAGTATCTAAGTACTT+AGG | - | chr7_2:81934162-81934181 | Msa1082010:intron | 30.0% | |
| GACAAGTATCTAAGTACTTA+GGG | - | chr7_2:81934163-81934182 | Msa1082010:intron | 30.0% | |
| ATCAAGTAGTATGGAATGTT+TGG | + | chr7_2:81934244-81934263 | None:intergenic | 30.0% | |
| ! | CCTTTGATAGATAGCTTTTA+AGG | + | chr7_2:81934427-81934446 | None:intergenic | 30.0% |
| CCTTAAAAGCTATCTATCAA+AGG | - | chr7_2:81934424-81934443 | Msa1082010:intron | 30.0% | |
| AGGGATTATGATAGAGATTT+GGG | + | chr7_2:81934520-81934539 | None:intergenic | 30.0% | |
| GTTGTCTATATCACAATATG+AGG | + | chr7_2:81934540-81934559 | None:intergenic | 30.0% | |
| ! | ACGTTTTCTCTTCAAAATGA+GGG | - | chr7_2:81934864-81934883 | Msa1082010:intron | 30.0% |
| !!! | TTTTTTTGTTGATGTTGTCG+GGG | - | chr7_2:81934952-81934971 | Msa1082010:intron | 30.0% |
| !! | ATCCAATTACATTTTTCAGC+GGG | - | chr7_2:81935212-81935231 | Msa1082010:intron | 30.0% |
| !!! | TATGGTATTTTTTCTCGAAC+TGG | - | chr7_2:81935435-81935454 | Msa1082010:intron | 30.0% |
| ! | GTATGTTTTCTGATAAAAGC+TGG | - | chr7_2:81935457-81935476 | Msa1082010:intron | 30.0% |
| TTCTATAATACACAGAAGCA+CGG | - | chr7_2:81935531-81935550 | Msa1082010:intron | 30.0% | |
| !! | TTATCAACATAGGGTTTTGT+GGG | + | chr7_2:81935857-81935876 | None:intergenic | 30.0% |
| ! | TGTCATGCATTTTTCTTGTT+TGG | - | chr7_2:81936168-81936187 | Msa1082010:five_prime_UTR | 30.0% |
| !! | GTCATGCATTTTTCTTGTTT+GGG | - | chr7_2:81936169-81936188 | Msa1082010:five_prime_UTR | 30.0% |
| !! | TCATGCATTTTTCTTGTTTG+GGG | - | chr7_2:81936170-81936189 | Msa1082010:five_prime_UTR | 30.0% |
| AAAAAAGAGATCATGTGTCT+GGG | + | chr7_2:81936204-81936223 | None:intergenic | 30.0% | |
| TCGAAATCTCAACACAAACA+TGG | - | chr7_2:81931014-81931033 | Msa1082010:three_prime_UTR | 35.0% | |
| !! | TGTAGATGGTCATGTTTTGA+GGG | + | chr7_2:81931065-81931084 | None:intergenic | 35.0% |
| ! | ATGTAGATGGTCATGTTTTG+AGG | + | chr7_2:81931066-81931085 | None:intergenic | 35.0% |
| !! | ACGCTGTTTTCAGTCAATTT+GGG | - | chr7_2:81931217-81931236 | Msa1082010:three_prime_UTR | 35.0% |
| TCAATTTGGGAAGATACTTG+AGG | - | chr7_2:81931230-81931249 | Msa1082010:three_prime_UTR | 35.0% | |
| AGAGCATATGATAGTACCAT+GGG | + | chr7_2:81931369-81931388 | None:intergenic | 35.0% | |
| ! | AAGAGCATATGATAGTACCA+TGG | + | chr7_2:81931370-81931389 | None:intergenic | 35.0% |
| GCTATTTATCAGATCACTAG+AGG | - | chr7_2:81931881-81931900 | Msa1082010:CDS | 35.0% | |
| ATTTATCAGATCACTAGAGG+TGG | - | chr7_2:81931884-81931903 | Msa1082010:CDS | 35.0% | |
| AAACTTTATCCCACTAGATG+GGG | + | chr7_2:81932027-81932046 | None:intergenic | 35.0% | |
| CAAACTTTATCCCACTAGAT+GGG | + | chr7_2:81932028-81932047 | None:intergenic | 35.0% | |
| TATTCTGTTCAATGAGGGAA+GGG | + | chr7_2:81932100-81932119 | None:intergenic | 35.0% | |
| TTCCCTCATTGAACAGAATA+GGG | - | chr7_2:81932100-81932119 | Msa1082010:intron | 35.0% | |
| ! | AGGGAGATATTTTTCTTGGA+AGG | - | chr7_2:81932119-81932138 | Msa1082010:intron | 35.0% |
| ! | GTGGATTTTAGACATAGTGT+AGG | - | chr7_2:81932145-81932164 | Msa1082010:intron | 35.0% |
| AAATAGCAAAACTGATGCCA+AGG | - | chr7_2:81932176-81932195 | Msa1082010:intron | 35.0% | |
| AGCTAAGTTAACTATATCCG+TGG | - | chr7_2:81932571-81932590 | Msa1082010:intron | 35.0% | |
| CATATTTATCCCCAATGTCA+AGG | - | chr7_2:81932758-81932777 | Msa1082010:intron | 35.0% | |
| ACTAAATACAGACTTGTACG+TGG | - | chr7_2:81932820-81932839 | Msa1082010:intron | 35.0% | |
| TTGACTGTGTCTGATGTTTA+GGG | - | chr7_2:81932863-81932882 | Msa1082010:intron | 35.0% | |
| TTGATGTTAAGGGTCTGTTT+AGG | + | chr7_2:81933097-81933116 | None:intergenic | 35.0% | |
| ! | TATGTTTGGGAATTGGGTTT+TGG | + | chr7_2:81933315-81933334 | None:intergenic | 35.0% |
| TAATCTCATGGCCATTCTTA+CGG | + | chr7_2:81933351-81933370 | None:intergenic | 35.0% | |
| AAGATCCGCCTATGTATTAA+TGG | + | chr7_2:81933452-81933471 | None:intergenic | 35.0% | |
| GAATCAATTCCTGAAACTCT+GGG | + | chr7_2:81933611-81933630 | None:intergenic | 35.0% | |
| AGAATCAATTCCTGAAACTC+TGG | + | chr7_2:81933612-81933631 | None:intergenic | 35.0% | |
| ATCTTTGAATCACGACTTTG+GGG | + | chr7_2:81933643-81933662 | None:intergenic | 35.0% | |
| GTATGGTCTATCTTAATGGA+TGG | - | chr7_2:81933808-81933827 | Msa1082010:intron | 35.0% | |
| !! | TGTTTGGTGGTGTAATTAAG+TGG | + | chr7_2:81934228-81934247 | None:intergenic | 35.0% |
| AAGTAGTATGGAATGTTTGG+TGG | + | chr7_2:81934241-81934260 | None:intergenic | 35.0% | |
| ACATTCCATACTACTTGATG+TGG | - | chr7_2:81934245-81934264 | Msa1082010:intron | 35.0% | |
| CATTCCATACTACTTGATGT+GGG | - | chr7_2:81934246-81934265 | Msa1082010:intron | 35.0% | |
| !! | GATAGATAGCTTTTAAGGGA+TGG | + | chr7_2:81934422-81934441 | None:intergenic | 35.0% |
| ATAGAGATTTGGGCATTATG+GGG | + | chr7_2:81934510-81934529 | None:intergenic | 35.0% | |
| GATAGAGATTTGGGCATTAT+GGG | + | chr7_2:81934511-81934530 | None:intergenic | 35.0% | |
| TGATAGAGATTTGGGCATTA+TGG | + | chr7_2:81934512-81934531 | None:intergenic | 35.0% | |
| GAGGGATTATGATAGAGATT+TGG | + | chr7_2:81934521-81934540 | None:intergenic | 35.0% | |
| !! | CTTGCCTGAGAATAGTTTTA+TGG | + | chr7_2:81934628-81934647 | None:intergenic | 35.0% |
| TATGACATCAGATTTAGTCC+TGG | + | chr7_2:81934694-81934713 | None:intergenic | 35.0% | |
| ! | CACGTTTTCTCTTCAAAATG+AGG | - | chr7_2:81934863-81934882 | Msa1082010:intron | 35.0% |
| ! | TTGACTTTTAGTGTCCAGTA+CGG | - | chr7_2:81935122-81935141 | Msa1082010:intron | 35.0% |
| !! | ATTTTTCAGCGGGCAAAAAA+AGG | - | chr7_2:81935222-81935241 | Msa1082010:intron | 35.0% |
| !! | AGAATATTATTTGGTGGTGC+AGG | + | chr7_2:81935654-81935673 | None:intergenic | 35.0% |
| ! | AACAGCATTTGAAGCATCAT+GGG | + | chr7_2:81935708-81935727 | None:intergenic | 35.0% |
| ! | AAACAGCATTTGAAGCATCA+TGG | + | chr7_2:81935709-81935728 | None:intergenic | 35.0% |
| !! | ATGCTGTTTCTTCAATATCC+TGG | - | chr7_2:81935720-81935739 | Msa1082010:intron | 35.0% |
| TCTTCAATATCCTGGATTCA+AGG | - | chr7_2:81935728-81935747 | Msa1082010:intron | 35.0% | |
| ATTCTAACTTCCTTGAATCC+AGG | + | chr7_2:81935741-81935760 | None:intergenic | 35.0% | |
| TGGATTCAAGGAAGTTAGAA+TGG | - | chr7_2:81935740-81935759 | Msa1082010:intron | 35.0% | |
| !! | TATCAACATAGGGTTTTGTG+GGG | + | chr7_2:81935856-81935875 | None:intergenic | 35.0% |
| ! | GTTATCAACATAGGGTTTTG+TGG | + | chr7_2:81935858-81935877 | None:intergenic | 35.0% |
| TCCAACTAATGTTGCAAGAA+AGG | - | chr7_2:81935905-81935924 | Msa1082010:CDS | 35.0% | |
| !! | CATGCATTTTTCTTGTTTGG+GGG | - | chr7_2:81936171-81936190 | Msa1082010:five_prime_UTR | 35.0% |
| AAAAAGAGATCATGTGTCTG+GGG | + | chr7_2:81936203-81936222 | None:intergenic | 35.0% | |
| CAAAAAAGAGATCATGTGTC+TGG | + | chr7_2:81936205-81936224 | None:intergenic | 35.0% | |
| !!! | TAGATGGTCATGTTTTGAGG+GGG | + | chr7_2:81931063-81931082 | None:intergenic | 40.0% |
| !! | GTAGATGGTCATGTTTTGAG+GGG | + | chr7_2:81931064-81931083 | None:intergenic | 40.0% |
| GTTGAGGTTGTTGATGTAGA+TGG | + | chr7_2:81931079-81931098 | None:intergenic | 40.0% | |
| !! | CACGCTGTTTTCAGTCAATT+TGG | - | chr7_2:81931216-81931235 | Msa1082010:three_prime_UTR | 40.0% |
| TGAAACATAAGGGTCAAGCT+TGG | - | chr7_2:81931271-81931290 | Msa1082010:exon | 40.0% | |
| GAAACATAAGGGTCAAGCTT+GGG | - | chr7_2:81931272-81931291 | Msa1082010:exon | 40.0% | |
| ! | TCAAGCTTGGGTGATTTTTG+AGG | - | chr7_2:81931284-81931303 | Msa1082010:exon | 40.0% |
| CTTCTGCTTCTAATGCTCTT+AGG | - | chr7_2:81931313-81931332 | Msa1082010:CDS | 40.0% | |
| AATGCTCTTAGGCAAATGCA+AGG | - | chr7_2:81931324-81931343 | Msa1082010:CDS | 40.0% | |
| ACCATGGGCTTATCATAGAA+GGG | + | chr7_2:81931354-81931373 | None:intergenic | 40.0% | |
| TACCATGGGCTTATCATAGA+AGG | + | chr7_2:81931355-81931374 | None:intergenic | 40.0% | |
| TCTTGTGATGATTGACACTG+TGG | - | chr7_2:81931760-81931779 | Msa1082010:intron | 40.0% | |
| CCAAACTTTATCCCACTAGA+TGG | + | chr7_2:81932029-81932048 | None:intergenic | 40.0% | |
| CCATCTAGTGGGATAAAGTT+TGG | - | chr7_2:81932026-81932045 | Msa1082010:intron | 40.0% | |
| ATTCTGTTCAATGAGGGAAG+GGG | + | chr7_2:81932099-81932118 | None:intergenic | 40.0% | |
| CTATTCTGTTCAATGAGGGA+AGG | + | chr7_2:81932101-81932120 | None:intergenic | 40.0% | |
| CTTCCCTCATTGAACAGAAT+AGG | - | chr7_2:81932099-81932118 | Msa1082010:intron | 40.0% | |
| CTCCCTATTCTGTTCAATGA+GGG | + | chr7_2:81932105-81932124 | None:intergenic | 40.0% | |
| TCTCCCTATTCTGTTCAATG+AGG | + | chr7_2:81932106-81932125 | None:intergenic | 40.0% | |
| TAGACATAGTGTAGGACACT+AGG | - | chr7_2:81932153-81932172 | Msa1082010:intron | 40.0% | |
| TTTATCCCCAAGTGTTCAAG+TGG | - | chr7_2:81932223-81932242 | Msa1082010:intron | 40.0% | |
| AAACGACCACTTGAACACTT+GGG | + | chr7_2:81932232-81932251 | None:intergenic | 40.0% | |
| AAAACGACCACTTGAACACT+TGG | + | chr7_2:81932233-81932252 | None:intergenic | 40.0% | |
| ! | AGTCTCATGGCTATGCTTTT+GGG | + | chr7_2:81932393-81932412 | None:intergenic | 40.0% |
| AAGATCAGCCTATGGATCAA+TGG | + | chr7_2:81932418-81932437 | None:intergenic | 40.0% | |
| !!! | AACACGAAAGTCACTTTTGC+CGG | + | chr7_2:81932549-81932568 | None:intergenic | 40.0% |
| ! | TTGATGGATCCTTGACATTG+GGG | + | chr7_2:81932770-81932789 | None:intergenic | 40.0% |
| ! | CTTGATGGATCCTTGACATT+GGG | + | chr7_2:81932771-81932790 | None:intergenic | 40.0% |
| ! | ACTTGATGGATCCTTGACAT+TGG | + | chr7_2:81932772-81932791 | None:intergenic | 40.0% |
| GTTGACTGTGTCTGATGTTT+AGG | - | chr7_2:81932862-81932881 | Msa1082010:intron | 40.0% | |
| TGACTGTGTCTGATGTTTAG+GGG | - | chr7_2:81932864-81932883 | Msa1082010:intron | 40.0% | |
| ! | TTAAGGGTATGTTAGGATGG+AGG | - | chr7_2:81932906-81932925 | Msa1082010:intron | 40.0% |
| ! | TAAGGGTATGTTAGGATGGA+GGG | - | chr7_2:81932907-81932926 | Msa1082010:intron | 40.0% |
| TATGTTAGGATGGAGGGTTT+AGG | - | chr7_2:81932913-81932932 | Msa1082010:intron | 40.0% | |
| TGTTAAGGGTCTGTTTAGGA+GGG | + | chr7_2:81933093-81933112 | None:intergenic | 40.0% | |
| ATGTTAAGGGTCTGTTTAGG+AGG | + | chr7_2:81933094-81933113 | None:intergenic | 40.0% | |
| !!! | AATTGGGTTTTGGAGGGAAA+GGG | + | chr7_2:81933305-81933324 | None:intergenic | 40.0% |
| !!! | TTTGGGAATTGGGTTTTGGA+GGG | + | chr7_2:81933311-81933330 | None:intergenic | 40.0% |
| GTAGGCTATGTTTGGGAATT+GGG | + | chr7_2:81933321-81933340 | None:intergenic | 40.0% | |
| CAATTCCCAAACATAGCCTA+CGG | - | chr7_2:81933320-81933339 | Msa1082010:intron | 40.0% | |
| AATTCCCAAACATAGCCTAC+GGG | - | chr7_2:81933321-81933340 | Msa1082010:intron | 40.0% | |
| AATCTCATGGCCATTCTTAC+GGG | + | chr7_2:81933350-81933369 | None:intergenic | 40.0% | |
| AGTGAAGGAAGCTAATCTCA+TGG | + | chr7_2:81933363-81933382 | None:intergenic | 40.0% | |
| CAATCTTGTGGCTATGCTTA+TGG | + | chr7_2:81933428-81933447 | None:intergenic | 40.0% | |
| !! | CTAGCTTTGTCACAAGTTTG+TGG | - | chr7_2:81933736-81933755 | Msa1082010:intron | 40.0% |
| ! | GTCTATCTTAATGGATGGTG+TGG | - | chr7_2:81933813-81933832 | Msa1082010:intron | 40.0% |
| ! | TCTTAATGGATGGTGTGGTA+TGG | - | chr7_2:81933818-81933837 | Msa1082010:intron | 40.0% |
| !! | AATTGCTTGATTTGTGCCGT+TGG | - | chr7_2:81933917-81933936 | Msa1082010:intron | 40.0% |
| !!! | CTATTTTAGCATGGGGGAAA+TGG | + | chr7_2:81934073-81934092 | None:intergenic | 40.0% |
| TTCCCTTAGCTAGCAATCAA+GGG | - | chr7_2:81934190-81934209 | Msa1082010:intron | 40.0% | |
| GGTGGTGTAATTAAGTGGTT+TGG | + | chr7_2:81934223-81934242 | None:intergenic | 40.0% | |
| AAGTCCCACATCAAGTAGTA+TGG | + | chr7_2:81934253-81934272 | None:intergenic | 40.0% | |
| ATACTACTTGATGTGGGACT+TGG | - | chr7_2:81934252-81934271 | Msa1082010:intron | 40.0% | |
| TACTACTTGATGTGGGACTT+GGG | - | chr7_2:81934253-81934272 | Msa1082010:intron | 40.0% | |
| TCTATCAAAGGGGAAGAACA+AGG | - | chr7_2:81934436-81934455 | Msa1082010:intron | 40.0% | |
| ATTGAGTAGTATGGGATGCT+CGG | + | chr7_2:81934478-81934497 | None:intergenic | 40.0% | |
| CATCCCATACTACTCAATGT+GGG | - | chr7_2:81934480-81934499 | Msa1082010:intron | 40.0% | |
| ! | TTTTGTCTGTTTGGACCCAT+CGG | - | chr7_2:81934571-81934590 | Msa1082010:intron | 40.0% |
| CAAACTATTGCACATCCGAT+GGG | + | chr7_2:81934589-81934608 | None:intergenic | 40.0% | |
| ACAAACTATTGCACATCCGA+TGG | + | chr7_2:81934590-81934609 | None:intergenic | 40.0% | |
| GATGTCATAGCAAAAGCAGA+CGG | - | chr7_2:81934705-81934724 | Msa1082010:intron | 40.0% | |
| GAGCTTAAACTTAACAGTGC+AGG | + | chr7_2:81934815-81934834 | None:intergenic | 40.0% | |
| !!! | TGTTGTCGGGGTTTTTTGTT+TGG | - | chr7_2:81934964-81934983 | Msa1082010:intron | 40.0% |
| !!! | TCGGGGTTTTTTGTTTGGTT+TGG | - | chr7_2:81934969-81934988 | Msa1082010:intron | 40.0% |
| !! | TTGTTTGGTTTGGTTGCCAA+AGG | - | chr7_2:81934979-81934998 | Msa1082010:intron | 40.0% |
| !! | TGTTTGGTTTGGTTGCCAAA+GGG | - | chr7_2:81934980-81934999 | Msa1082010:intron | 40.0% |
| AGTCTGTTCTTTGCTGATGA+AGG | + | chr7_2:81935090-81935109 | None:intergenic | 40.0% | |
| TAAAAGAGTTGCATCCGTAC+TGG | + | chr7_2:81935139-81935158 | None:intergenic | 40.0% | |
| TGCCCGCTGAAAAATGTAAT+TGG | + | chr7_2:81935217-81935236 | None:intergenic | 40.0% | |
| ! | CAGCTAAATTAGCGTCGTTT+TGG | + | chr7_2:81935253-81935272 | None:intergenic | 40.0% |
| CAAAACGACGCTAATTTAGC+TGG | - | chr7_2:81935251-81935270 | Msa1082010:intron | 40.0% | |
| GATATCCCAGATACCTTATC+CGG | - | chr7_2:81935599-81935618 | Msa1082010:intron | 40.0% | |
| ATATCCCAGATACCTTATCC+GGG | - | chr7_2:81935600-81935619 | Msa1082010:intron | 40.0% | |
| TATTCCACAAAGGCAATTCC+TGG | + | chr7_2:81935777-81935796 | None:intergenic | 40.0% | |
| GGAATTGCCTTTGTGGAATA+TGG | - | chr7_2:81935777-81935796 | Msa1082010:intron | 40.0% | |
| CTCATCTCCATATTCCACAA+AGG | + | chr7_2:81935787-81935806 | None:intergenic | 40.0% | |
| GCCTTTCTTGCAACATTAGT+TGG | + | chr7_2:81935909-81935928 | None:intergenic | 40.0% | |
| ACTAATGTTGCAAGAAAGGC+AGG | - | chr7_2:81935909-81935928 | Msa1082010:CDS | 40.0% | |
| CTACAATCATACCAGAACCA+AGG | + | chr7_2:81936014-81936033 | None:intergenic | 40.0% | |
| CGAAGATGAAAGAGAGAGTG+AGG | + | chr7_2:81930997-81931016 | None:intergenic | 45.0% | |
| CCATGGGCTTATCATAGAAG+GGG | + | chr7_2:81931353-81931372 | None:intergenic | 45.0% | |
| ATCTATAGAGGAGACACGAC+TGG | + | chr7_2:81931669-81931688 | None:intergenic | 45.0% | |
| TATCAGATCACTAGAGGTGG+AGG | - | chr7_2:81931887-81931906 | Msa1082010:CDS | 45.0% | |
| TTTATCCCACTAGATGGGGT+TGG | + | chr7_2:81932023-81932042 | None:intergenic | 45.0% | |
| ACTAGAACTGAGTCAGTCCT+TGG | + | chr7_2:81932196-81932215 | None:intergenic | 45.0% | |
| ! | AAGGACTGACTCAGTTCTAG+TGG | - | chr7_2:81932195-81932214 | Msa1082010:intron | 45.0% |
| AACGACCACTTGAACACTTG+GGG | + | chr7_2:81932231-81932250 | None:intergenic | 45.0% | |
| AGCGAAGGAAGCTAATCTCT+TGG | + | chr7_2:81932321-81932340 | None:intergenic | 45.0% | |
| ! | CAGTCTCATGGCTATGCTTT+TGG | + | chr7_2:81932394-81932413 | None:intergenic | 45.0% |
| TGGATCAATGGTCAGTCTCA+TGG | + | chr7_2:81932406-81932425 | None:intergenic | 45.0% | |
| GAGACTGACCATTGATCCAT+AGG | - | chr7_2:81932407-81932426 | Msa1082010:intron | 45.0% | |
| TGCTCTTGTCTTGTGATGAC+CGG | - | chr7_2:81932527-81932546 | Msa1082010:intron | 45.0% | |
| TTGAGTGTAGGGGAAGGATT+TGG | + | chr7_2:81932623-81932642 | None:intergenic | 45.0% | |
| TGTTCATTGAGTGTAGGGGA+AGG | + | chr7_2:81932629-81932648 | None:intergenic | 45.0% | |
| GTAAAACTGATGCCAAGGAC+TGG | - | chr7_2:81932720-81932739 | Msa1082010:intron | 45.0% | |
| TTAGGATGGAGGGTTTAGGA+GGG | - | chr7_2:81932917-81932936 | Msa1082010:intron | 45.0% | |
| !! | CTGTTTAGGAGGGCTTTAGA+GGG | + | chr7_2:81933083-81933102 | None:intergenic | 45.0% |
| ! | TCTGTTTAGGAGGGCTTTAG+AGG | + | chr7_2:81933084-81933103 | None:intergenic | 45.0% |
| !!! | GAATTGGGTTTTGGAGGGAA+AGG | + | chr7_2:81933306-81933325 | None:intergenic | 45.0% |
| !! | GTTTGGGAATTGGGTTTTGG+AGG | + | chr7_2:81933312-81933331 | None:intergenic | 45.0% |
| CGTAGGCTATGTTTGGGAAT+TGG | + | chr7_2:81933322-81933341 | None:intergenic | 45.0% | |
| GATACCCGTAGGCTATGTTT+GGG | + | chr7_2:81933328-81933347 | None:intergenic | 45.0% | |
| ! | GTTTTGCAACCCAGAGTTTC+AGG | - | chr7_2:81933599-81933618 | Msa1082010:intron | 45.0% |
| ! | TTTGAATCACGACTTTGGGG+AGG | + | chr7_2:81933640-81933659 | None:intergenic | 45.0% |
| CTTGATTGCTAGCTAAGGGA+AGG | + | chr7_2:81934191-81934210 | None:intergenic | 45.0% | |
| CTTCCCTTAGCTAGCAATCA+AGG | - | chr7_2:81934189-81934208 | Msa1082010:intron | 45.0% | |
| TCCCTTAGCTAGCAATCAAG+GGG | - | chr7_2:81934191-81934210 | Msa1082010:intron | 45.0% | |
| TTGTAAAGAGCTACCGACAG+AGG | + | chr7_2:81934345-81934364 | None:intergenic | 45.0% | |
| TTGGTATCACAACTGGTCGT+CGG | + | chr7_2:81934372-81934391 | None:intergenic | 45.0% | |
| GCATCCCATACTACTCAATG+TGG | - | chr7_2:81934479-81934498 | Msa1082010:intron | 45.0% | |
| GGTCCCACATTGAGTAGTAT+GGG | + | chr7_2:81934486-81934505 | None:intergenic | 45.0% | |
| TGGTCCCACATTGAGTAGTA+TGG | + | chr7_2:81934487-81934506 | None:intergenic | 45.0% | |
| TGCAGAGAATACAGTATGCC+AGG | - | chr7_2:81934673-81934692 | Msa1082010:intron | 45.0% | |
| ! | CAGACGGTACTTTTGTTCCT+CGG | - | chr7_2:81934721-81934740 | Msa1082010:intron | 45.0% |
| ! | AGACGGTACTTTTGTTCCTC+GGG | - | chr7_2:81934722-81934741 | Msa1082010:intron | 45.0% |
| TTCCTCGGGAAAAACGAAAG+AGG | - | chr7_2:81934736-81934755 | Msa1082010:intron | 45.0% | |
| ! | TTTGGTTGCCAAAGGGCTTT+TGG | - | chr7_2:81934987-81935006 | Msa1082010:intron | 45.0% |
| ! | TTGGTTGCCAAAGGGCTTTT+GGG | - | chr7_2:81934988-81935007 | Msa1082010:intron | 45.0% |
| TTCAGCGGGCAAAAAAAGGA+AGG | - | chr7_2:81935226-81935245 | Msa1082010:intron | 45.0% | |
| GACGCTAATTTAGCTGGAAC+TGG | - | chr7_2:81935257-81935276 | Msa1082010:intron | 45.0% | |
| CACCAGCATAAGCAGGATTT+AGG | + | chr7_2:81935283-81935302 | None:intergenic | 45.0% | |
| CTAAATCCTGCTTATGCTGG+TGG | - | chr7_2:81935281-81935300 | Msa1082010:intron | 45.0% | |
| ACAGCAGAGAAACTTACAGC+TGG | + | chr7_2:81935320-81935339 | None:intergenic | 45.0% | |
| ! | CATTTGAAGCATCATGGGAG+TGG | + | chr7_2:81935703-81935722 | None:intergenic | 45.0% |
| AGAATGGTTGAAGCTAAGCC+AGG | - | chr7_2:81935756-81935775 | Msa1082010:intron | 45.0% | |
| TAAGCCAGGAATTGCCTTTG+TGG | - | chr7_2:81935770-81935789 | Msa1082010:intron | 45.0% | |
| AGATGAGATGCAATCCACAG+TGG | - | chr7_2:81935800-81935819 | Msa1082010:intron | 45.0% | |
| AGAGTGAGGTTCTTCACGAC+GGG | + | chr7_2:81930983-81931002 | None:intergenic | 50.0% | |
| GAGAGTGAGGTTCTTCACGA+CGG | + | chr7_2:81930984-81931003 | None:intergenic | 50.0% | |
| TTTGAGGGGGTTCGGGATTA+GGG | + | chr7_2:81931050-81931069 | None:intergenic | 50.0% | |
| !! | TTTTGAGGGGGTTCGGGATT+AGG | + | chr7_2:81931051-81931070 | None:intergenic | 50.0% |
| !!! | GTCATGTTTTGAGGGGGTTC+GGG | + | chr7_2:81931057-81931076 | None:intergenic | 50.0% |
| !!! | GGTCATGTTTTGAGGGGGTT+CGG | + | chr7_2:81931058-81931077 | None:intergenic | 50.0% |
| CCCCTTCTATGATAAGCCCA+TGG | - | chr7_2:81931350-81931369 | Msa1082010:CDS | 50.0% | |
| !! | ACTAGATGGGGTTGGCTACA+TGG | + | chr7_2:81932015-81932034 | None:intergenic | 50.0% |
| ATGTAGCCAACCCCATCTAG+TGG | - | chr7_2:81932014-81932033 | Msa1082010:intron | 50.0% | |
| TGTAGCCAACCCCATCTAGT+GGG | - | chr7_2:81932015-81932034 | Msa1082010:intron | 50.0% | |
| TGTTCAATGAGGGAAGGGGA+GGG | + | chr7_2:81932095-81932114 | None:intergenic | 50.0% | |
| TCCATAGGCTGATCTTCCGA+TGG | - | chr7_2:81932422-81932441 | Msa1082010:CDS | 50.0% | |
| TCCATCGGAAGATCAGCCTA+TGG | + | chr7_2:81932426-81932445 | None:intergenic | 50.0% | |
| TAGGCTGATCTTCCGATGGA+CGG | - | chr7_2:81932426-81932445 | Msa1082010:CDS | 50.0% | |
| GTCACGATATCTCCGTCCAT+CGG | + | chr7_2:81932441-81932460 | None:intergenic | 50.0% | |
| GTTAGGATGGAGGGTTTAGG+AGG | - | chr7_2:81932916-81932935 | Msa1082010:intron | 50.0% | |
| TAGGATGGAGGGTTTAGGAG+GGG | - | chr7_2:81932918-81932937 | Msa1082010:intron | 50.0% | |
| GGATACCCGTAGGCTATGTT+TGG | + | chr7_2:81933329-81933348 | None:intergenic | 50.0% | |
| CATTCTTACGGGATACCCGT+AGG | + | chr7_2:81933339-81933358 | None:intergenic | 50.0% | |
| CTACGGGTATCCCGTAAGAA+TGG | - | chr7_2:81933337-81933356 | Msa1082010:intron | 50.0% | |
| CCCCCTTGATTGCTAGCTAA+GGG | + | chr7_2:81934195-81934214 | None:intergenic | 50.0% | |
| CCCTTAGCTAGCAATCAAGG+GGG | - | chr7_2:81934192-81934211 | Msa1082010:intron | 50.0% | |
| TCCCCCTTGATTGCTAGCTA+AGG | + | chr7_2:81934196-81934215 | None:intergenic | 50.0% | |
| GAGATTTGGGCATTATGGGG+TGG | + | chr7_2:81934507-81934526 | None:intergenic | 50.0% | |
| !! | TGCCTCTTTCGTTTTTCCCG+AGG | + | chr7_2:81934741-81934760 | None:intergenic | 50.0% |
| ! | CGAAAGAGGCACGATGACAA+AGG | - | chr7_2:81934750-81934769 | Msa1082010:intron | 50.0% |
| TTATTGGGCACTCAGTGGGT+TGG | + | chr7_2:81934891-81934910 | None:intergenic | 50.0% | |
| ACCCACTGAGTGCCCAATAA+TGG | - | chr7_2:81934891-81934910 | Msa1082010:intron | 50.0% | |
| GCCATTATTGGGCACTCAGT+GGG | + | chr7_2:81934895-81934914 | None:intergenic | 50.0% | |
| TGCCATTATTGGGCACTCAG+TGG | + | chr7_2:81934896-81934915 | None:intergenic | 50.0% | |
| ! | TGGTTGCCAAAGGGCTTTTG+GGG | - | chr7_2:81934989-81935008 | Msa1082010:intron | 50.0% |
| TCATGACCCCAAAAGCCCTT+TGG | + | chr7_2:81934998-81935017 | None:intergenic | 50.0% | |
| GGCCTAAATCCTGCTTATGC+TGG | - | chr7_2:81935278-81935297 | Msa1082010:intron | 50.0% | |
| CCTGCTTATGCTGGTGGTTA+CGG | - | chr7_2:81935287-81935306 | Msa1082010:intron | 50.0% | |
| TGCAAAGTCCTTGCTACCTG+AGG | - | chr7_2:81935626-81935645 | Msa1082010:intron | 50.0% | |
| ATCATGGGAGTGGTCTCGTT+GGG | + | chr7_2:81935693-81935712 | None:intergenic | 50.0% | |
| !! | CGGCAAAGGGTTAGCTTCTC+CGG | - | chr7_2:81930933-81930952 | Msa1082010:three_prime_UTR | 55.0% |
| !! | AAAGGGTTAGCTTCTCCGGC+TGG | - | chr7_2:81930937-81930956 | Msa1082010:three_prime_UTR | 55.0% |
| GGTAAACCCTATGAGCCAGC+CGG | + | chr7_2:81930955-81930974 | None:intergenic | 55.0% | |
| AGTGAGGTTCTTCACGACGG+GGG | + | chr7_2:81930981-81931000 | None:intergenic | 55.0% | |
| GAGTGAGGTTCTTCACGACG+GGG | + | chr7_2:81930982-81931001 | None:intergenic | 55.0% | |
| CTGTTCAATGAGGGAAGGGG+AGG | + | chr7_2:81932096-81932115 | None:intergenic | 55.0% | |
| !!! | GGTTTTGGAGGGAAAGGGAG+GGG | + | chr7_2:81933300-81933319 | None:intergenic | 55.0% |
| !!! | GGGTTTTGGAGGGAAAGGGA+GGG | + | chr7_2:81933301-81933320 | None:intergenic | 55.0% |
| !!! | TGGGTTTTGGAGGGAAAGGG+AGG | + | chr7_2:81933302-81933321 | None:intergenic | 55.0% |
| GGCGGATCTTCTCATGCACA+CGG | - | chr7_2:81933462-81933481 | Msa1082010:intron | 55.0% | |
| TTTCCGCTCTGCTCCTCTGT+CGG | - | chr7_2:81934329-81934348 | Msa1082010:intron | 55.0% | |
| GAGTAGTATGGGATGCTCGG+TGG | + | chr7_2:81934475-81934494 | None:intergenic | 55.0% | |
| CCGTAACCACCAGCATAAGC+AGG | + | chr7_2:81935290-81935309 | None:intergenic | 55.0% | |
| TCCCAGATACCTTATCCGGG+CGG | - | chr7_2:81935603-81935622 | Msa1082010:intron | 55.0% | |
| ! | ACCGCCCGGATAAGGTATCT+GGG | + | chr7_2:81935607-81935626 | None:intergenic | 55.0% |
| CATCATGGGAGTGGTCTCGT+TGG | + | chr7_2:81935694-81935713 | None:intergenic | 55.0% | |
| GCAATCCACAGTGGCTATGC+AGG | - | chr7_2:81935809-81935828 | Msa1082010:intron | 55.0% | |
| TACCAGAACCAAGGCTGCTG+CGG | + | chr7_2:81936005-81936024 | None:intergenic | 55.0% | |
| ! | AGCTTCTCCGGCTGGCTCAT+AGG | - | chr7_2:81930945-81930964 | Msa1082010:three_prime_UTR | 60.0% |
| ! | GCTTCTCCGGCTGGCTCATA+GGG | - | chr7_2:81930946-81930965 | Msa1082010:three_prime_UTR | 60.0% |
| GGTTCTTCACGACGGGGGTA+AGG | + | chr7_2:81930976-81930995 | None:intergenic | 60.0% | |
| AGTCGTACTCGGCCAGTCCT+TGG | + | chr7_2:81932735-81932754 | None:intergenic | 60.0% | |
| GACAGAGGAGCAGAGCGGAA+AGG | + | chr7_2:81934330-81934349 | None:intergenic | 60.0% | |
| CTACCGACAGAGGAGCAGAG+CGG | + | chr7_2:81934335-81934354 | None:intergenic | 60.0% | |
| ! | CACCGCCCGGATAAGGTATC+TGG | + | chr7_2:81935608-81935627 | None:intergenic | 60.0% |
| GACTTTGCACCGCCCGGATA+AGG | + | chr7_2:81935615-81935634 | None:intergenic | 60.0% | |
| AGCAAGGACTTTGCACCGCC+CGG | + | chr7_2:81935621-81935640 | None:intergenic | 60.0% | |
| TGCAGGAGCCTCAGGTAGCA+AGG | + | chr7_2:81935637-81935656 | None:intergenic | 60.0% | |
| !! | TTTGGTGGTGCAGGAGCCTC+AGG | + | chr7_2:81935645-81935664 | None:intergenic | 60.0% |
| CTGTTTACCCGCAGCAGCCT+TGG | - | chr7_2:81935994-81936013 | Msa1082010:intron | 60.0% | |
| ACCAGAACCAAGGCTGCTGC+GGG | + | chr7_2:81936004-81936023 | None:intergenic | 60.0% | |
| CAGCGCCTGCATAGCCACTG+TGG | + | chr7_2:81935817-81935836 | None:intergenic | 65.0% | |
| ! | GTGGCTATGCAGGCGCTGCA+AGG | - | chr7_2:81935819-81935838 | Msa1082010:CDS | 65.0% |
| ACCCGCAGCAGCCTTGGTTC+TGG | - | chr7_2:81936000-81936019 | Msa1082010:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 81930921 | 81936262 | 81930921 | ID=Msa1082010;Name=Msa1082010 |
| chr7_2 | mRNA | 81930921 | 81936262 | 81930921 | ID=Msa1082010-mRNA-1;Parent=Msa1082010;Name=Msa1082010-mRNA-1;_AED=0.09;_eAED=0.09;_QI=112|1|1|1|0.75|1|5|369|245 |
| chr7_2 | exon | 81930921 | 81931583 | 81930921 | ID=Msa1082010-mRNA-1:exon:21114;Parent=Msa1082010-mRNA-1 |
| chr7_2 | exon | 81931861 | 81931952 | 81931861 | ID=Msa1082010-mRNA-1:exon:21113;Parent=Msa1082010-mRNA-1 |
| chr7_2 | exon | 81932412 | 81932505 | 81932412 | ID=Msa1082010-mRNA-1:exon:21112;Parent=Msa1082010-mRNA-1 |
| chr7_2 | exon | 81935812 | 81935984 | 81935812 | ID=Msa1082010-mRNA-1:exon:21111;Parent=Msa1082010-mRNA-1 |
| chr7_2 | exon | 81936066 | 81936262 | 81936066 | ID=Msa1082010-mRNA-1:exon:21110;Parent=Msa1082010-mRNA-1 |
| chr7_2 | five_prime_UTR | 81936151 | 81936262 | 81936151 | ID=Msa1082010-mRNA-1:five_prime_utr;Parent=Msa1082010-mRNA-1 |
| chr7_2 | CDS | 81936066 | 81936150 | 81936066 | ID=Msa1082010-mRNA-1:cds;Parent=Msa1082010-mRNA-1 |
| chr7_2 | CDS | 81935812 | 81935984 | 81935812 | ID=Msa1082010-mRNA-1:cds;Parent=Msa1082010-mRNA-1 |
| chr7_2 | CDS | 81932412 | 81932505 | 81932412 | ID=Msa1082010-mRNA-1:cds;Parent=Msa1082010-mRNA-1 |
| chr7_2 | CDS | 81931861 | 81931952 | 81931861 | ID=Msa1082010-mRNA-1:cds;Parent=Msa1082010-mRNA-1 |
| chr7_2 | CDS | 81931290 | 81931583 | 81931290 | ID=Msa1082010-mRNA-1:cds;Parent=Msa1082010-mRNA-1 |
| chr7_2 | three_prime_UTR | 81930921 | 81931289 | 81930921 | ID=Msa1082010-mRNA-1:three_prime_utr;Parent=Msa1082010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
