Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563730 | XP_003630495.1 | 84.305 | 223 | 31 | 2 | 1 | 220 | 1 | 222 | 1.50e-118 | 353 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563730 | sp|Q9C9U5|SIS8_ARATH | 43.089 | 123 | 67 | 2 | 238 | 357 | 270 | 392 | 5.01e-22 | 101 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563730 | G7LHA8 | 84.305 | 223 | 31 | 2 | 1 | 220 | 1 | 222 | 7.16e-119 | 353 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0563730 | Msa0564390 | 0.823889 | 1.085929e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563730 | MtrunA17_Chr8g0377581 | 84.305 | 223 | 31 | 2 | 1 | 220 | 1 | 222 | 1.38e-122 | 353 |
| Msa0563730 | MtrunA17_Chr1g0151511 | 47.727 | 264 | 86 | 8 | 2 | 218 | 3 | 261 | 1.43e-55 | 183 |
| Msa0563730 | MtrunA17_Chr1g0151541 | 73.485 | 132 | 30 | 3 | 239 | 365 | 222 | 353 | 1.07e-51 | 184 |
| Msa0563730 | MtrunA17_Chr1g0191171 | 49.123 | 114 | 55 | 2 | 242 | 352 | 230 | 343 | 1.54e-26 | 111 |
| Msa0563730 | MtrunA17_Chr6g0482711 | 43.548 | 124 | 67 | 2 | 238 | 358 | 233 | 356 | 5.93e-23 | 100 |
| Msa0563730 | MtrunA17_Chr8g0392871 | 40.000 | 130 | 75 | 2 | 230 | 358 | 230 | 357 | 4.25e-22 | 98.2 |
| Msa0563730 | MtrunA17_Chr5g0427651 | 36.792 | 106 | 62 | 1 | 245 | 345 | 367 | 472 | 7.08e-15 | 76.3 |
| Msa0563730 | MtrunA17_Chr1g0179331 | 35.345 | 116 | 73 | 2 | 233 | 347 | 270 | 384 | 1.74e-14 | 75.1 |
| Msa0563730 | MtrunA17_Chr3g0132791 | 35.200 | 125 | 73 | 3 | 238 | 357 | 323 | 444 | 2.31e-14 | 74.7 |
| Msa0563730 | MtrunA17_Chr8g0377571 | 80.000 | 45 | 8 | 1 | 245 | 288 | 72 | 116 | 2.57e-14 | 69.3 |
| Msa0563730 | MtrunA17_Chr1g0171451 | 42.683 | 82 | 46 | 1 | 265 | 345 | 208 | 289 | 6.20e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563730 | AT5G11850.1 | 59.504 | 121 | 46 | 2 | 238 | 355 | 231 | 351 | 1.58e-37 | 144 |
| Msa0563730 | AT1G18160.1 | 43.089 | 123 | 67 | 2 | 238 | 357 | 246 | 368 | 4.02e-23 | 101 |
| Msa0563730 | AT1G18160.2 | 43.089 | 123 | 67 | 2 | 238 | 357 | 246 | 368 | 4.46e-23 | 101 |
| Msa0563730 | AT1G73660.1 | 43.089 | 123 | 67 | 2 | 238 | 357 | 270 | 392 | 5.09e-23 | 101 |
| Msa0563730 | AT1G08720.2 | 36.134 | 119 | 73 | 2 | 240 | 355 | 216 | 334 | 1.01e-18 | 88.6 |
| Msa0563730 | AT1G08720.1 | 36.134 | 119 | 73 | 2 | 240 | 355 | 216 | 334 | 1.18e-18 | 88.2 |
| Msa0563730 | AT5G03730.2 | 39.316 | 117 | 66 | 4 | 233 | 347 | 299 | 412 | 2.91e-13 | 71.6 |
| Msa0563730 | AT5G03730.1 | 39.316 | 117 | 66 | 4 | 233 | 347 | 299 | 412 | 2.91e-13 | 71.6 |
| Msa0563730 | AT4G24480.3 | 35.955 | 89 | 52 | 1 | 262 | 345 | 396 | 484 | 6.39e-13 | 70.9 |
| Msa0563730 | AT4G24480.1 | 35.955 | 89 | 52 | 1 | 262 | 345 | 396 | 484 | 6.53e-13 | 70.9 |
| Msa0563730 | AT4G24480.2 | 35.955 | 89 | 52 | 1 | 262 | 345 | 396 | 484 | 6.82e-13 | 70.5 |
Find 72 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTGGTTTCATGCTGTTTA+TGG | 0.138541 | 4_1:-64197305 | Msa0563730:CDS |
| ATTCCCTGCATGCTTGTAAA+AGG | 0.204325 | 4_1:-64195760 | Msa0563730:CDS |
| GACAAAATTGGAGAAAATTT+TGG | 0.213621 | 4_1:+64199224 | None:intergenic |
| AAATTCAATCAAGAAGTTAA+TGG | 0.280474 | 4_1:-64198991 | Msa0563730:CDS |
| TTTGGTTTCATGCTGTTTAT+GGG | 0.288196 | 4_1:-64197304 | Msa0563730:CDS |
| GGAGGCTATGATGTTATTCT+TGG | 0.292173 | 4_1:-64199180 | Msa0563730:CDS |
| TCTGCTGACAATGGTGCTTC+AGG | 0.313597 | 4_1:-64199201 | Msa0563730:CDS |
| TGAAATTCGATGCCGATTAC+CGG | 0.359655 | 4_1:-64199288 | None:intergenic |
| ATGCTTAGTTACTTGCTCAT+AGG | 0.376479 | 4_1:-64195789 | Msa0563730:intron |
| TTCAATTTCCCATCAACATT+GGG | 0.379452 | 4_1:+64199027 | None:intergenic |
| GATTCACAACGACCGGTAAT+CGG | 0.388566 | 4_1:+64199276 | None:intergenic |
| AAAGAGTTTCCCAATGTTGA+TGG | 0.389992 | 4_1:-64199036 | Msa0563730:CDS |
| TGGAGGGCCGATGGGTCCTC+GGG | 0.410669 | 4_1:-64198743 | Msa0563730:CDS |
| GATTCAAAACTATGCTGGTT+GGG | 0.420742 | 4_1:-64195083 | Msa0563730:CDS |
| GTTTAAGTTCCTTGTGAAGC+TGG | 0.424424 | 4_1:+64199127 | None:intergenic |
| CTTGCTGATGTTAATATAAC+GGG | 0.432787 | 4_1:-64196897 | Msa0563730:CDS |
| GTCCTCGGGACATAGAAATT+AGG | 0.434748 | 4_1:-64198729 | Msa0563730:CDS |
| GTGGAGGGCCGATGGGTCCT+CGG | 0.438544 | 4_1:-64198744 | Msa0563730:CDS |
| ATTGTCAGCAGAGACAAAAT+TGG | 0.442188 | 4_1:+64199212 | None:intergenic |
| TTAAACTATCAAAATCTCAT+AGG | 0.445350 | 4_1:-64199110 | Msa0563730:CDS |
| CGGAGGGTTAGTTGCTCCTC+GGG | 0.449386 | 4_1:-64198911 | Msa0563730:CDS |
| AACTTTATGCTGCAGAGAAA+AGG | 0.455632 | 4_1:-64198672 | Msa0563730:CDS |
| ATTCAATTTCCCATCAACAT+TGG | 0.464254 | 4_1:+64199026 | None:intergenic |
| GTTGGGATTTCAGAGATTGT+AGG | 0.464623 | 4_1:-64195066 | Msa0563730:CDS |
| ACTTGCTGATGTTAATATAA+CGG | 0.469178 | 4_1:-64196898 | Msa0563730:CDS |
| TGAATACATAATTGATATGA+TGG | 0.477230 | 4_1:-64195149 | Msa0563730:CDS |
| AGGAAGGACAAAAGCTCTAA+AGG | 0.482938 | 4_1:+64196806 | None:intergenic |
| TATTCTTGGAAAGACTTTCA+AGG | 0.486432 | 4_1:-64199166 | Msa0563730:CDS |
| TTCCCTGCATGCTTGTAAAA+GGG | 0.488544 | 4_1:-64195759 | Msa0563730:CDS |
| TATTACGCAGGAACTGATGA+TGG | 0.502476 | 4_1:-64195733 | Msa0563730:CDS |
| ACAAACAAGAAACTTGAAGT+AGG | 0.507231 | 4_1:-64198706 | Msa0563730:CDS |
| TTTAGATGATTCACAACGAC+CGG | 0.509528 | 4_1:+64199269 | None:intergenic |
| TGCGAAGAGTGGAGGGCCGA+TGG | 0.514612 | 4_1:-64198752 | Msa0563730:CDS |
| AAGAGTTTCCCAATGTTGAT+GGG | 0.523006 | 4_1:-64199035 | Msa0563730:CDS |
| AGATTCAAAACTATGCTGGT+TGG | 0.523399 | 4_1:-64195084 | Msa0563730:CDS |
| ATTCTTGGAAAGACTTTCAA+GGG | 0.523914 | 4_1:-64199165 | Msa0563730:CDS |
| GGGACAAGAACAACAGAAAG+AGG | 0.527695 | 4_1:-64198797 | Msa0563730:CDS |
| CTCCTCGGGATGTAGATGTC+AGG | 0.529289 | 4_1:-64198897 | Msa0563730:CDS |
| ATTGATATGATGGGTGCTCC+TGG | 0.534687 | 4_1:-64195139 | Msa0563730:CDS |
| GCGAAGAGTGGAGGGCCGAT+GGG | 0.536215 | 4_1:-64198751 | Msa0563730:CDS |
| GTAAAAGGGAACTATTACGC+AGG | 0.543286 | 4_1:-64195745 | Msa0563730:CDS |
| TTTAGAAGTTGAAAATGCGA+AGG | 0.547721 | 4_1:-64198818 | Msa0563730:CDS |
| GCGGAGGGTTAGTTGCTCCT+CGG | 0.558909 | 4_1:-64198912 | Msa0563730:CDS |
| CAAACAAGAAACTTGAAGTA+GGG | 0.559654 | 4_1:-64198705 | Msa0563730:CDS |
| AGCAATGATGCGAAGAGTGG+AGG | 0.563241 | 4_1:-64198760 | Msa0563730:CDS |
| AATATAACGGGTCGACCAGT+TGG | 0.565278 | 4_1:-64196885 | Msa0563730:CDS |
| ATTACGCAGGAACTGATGAT+GGG | 0.565777 | 4_1:-64195732 | Msa0563730:CDS |
| AGTCAGATTCAAAACTATGC+TGG | 0.566006 | 4_1:-64195088 | Msa0563730:CDS |
| GCAATGATGCGAAGAGTGGA+GGG | 0.571141 | 4_1:-64198759 | Msa0563730:CDS |
| CAACACAATCATCTGTTATG+TGG | 0.571672 | 4_1:+64199073 | None:intergenic |
| GAATGAAGCCGTGAGTGAGA+AGG | 0.573910 | 4_1:-64198863 | Msa0563730:CDS |
| CATTCATCAAACTATGCAAG+AGG | 0.580688 | 4_1:+64195691 | None:intergenic |
| GAGAAAAGGAAGAATCAAGA+TGG | 0.586276 | 4_1:-64198658 | Msa0563730:CDS |
| TGAGAAGGAGAAAATGCAAA+GGG | 0.591298 | 4_1:-64198848 | Msa0563730:CDS |
| GTCCTAATTTCTATGTCCCG+AGG | 0.595550 | 4_1:+64198727 | None:intergenic |
| TTCTAAGCAACAGAAAGAGA+TGG | 0.598515 | 4_1:-64198968 | Msa0563730:CDS |
| TCAGCATGAATAAGAGCACC+AGG | 0.600138 | 4_1:+64195121 | None:intergenic |
| CTAAGCAATGATGCGAAGAG+TGG | 0.602938 | 4_1:-64198763 | Msa0563730:CDS |
| CTTGCTCAACCAGCTTCACA+AGG | 0.605167 | 4_1:-64199136 | Msa0563730:CDS |
| AAAGATAAGTAACAATGCGA+AGG | 0.605305 | 4_1:-64198941 | Msa0563730:CDS |
| TCTATGTCCCGAGGACCCAT+CGG | 0.610923 | 4_1:+64198736 | None:intergenic |
| TTAGAAGTTGAAAATGCGAA+GGG | 0.610992 | 4_1:-64198817 | Msa0563730:CDS |
| GCTGACAATGGTGCTTCAGG+AGG | 0.622331 | 4_1:-64199198 | Msa0563730:CDS |
| CATCTAGACAGCCAAGAGGA+AGG | 0.629646 | 4_1:+64196790 | None:intergenic |
| GACCTGACATCTACATCCCG+AGG | 0.639732 | 4_1:+64198895 | None:intergenic |
| GTGAGAAGGAGAAAATGCAA+AGG | 0.641271 | 4_1:-64198849 | Msa0563730:CDS |
| AATGCGAAGGTTGAAAGCGG+AGG | 0.641854 | 4_1:-64198928 | Msa0563730:CDS |
| ATGCGAAGGTTGAAAGCGGA+GGG | 0.642455 | 4_1:-64198927 | Msa0563730:CDS |
| AACAATGCGAAGGTTGAAAG+CGG | 0.662379 | 4_1:-64198931 | Msa0563730:CDS |
| TTACGCAGGAACTGATGATG+GGG | 0.678345 | 4_1:-64195731 | Msa0563730:CDS |
| GAATACATAATTGATATGAT+GGG | 0.680231 | 4_1:-64195148 | Msa0563730:CDS |
| CTAACATCTAGACAGCCAAG+AGG | 0.680375 | 4_1:+64196786 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCATATATTCATTAATAAA+GGG | + | chr4_1:64198836-64198855 | None:intergenic | 10.0% |
| !! | TTTCATATATTCATTAATAA+AGG | + | chr4_1:64198837-64198856 | None:intergenic | 10.0% |
| !! | AATATAGTTTACAAAATACT+TGG | + | chr4_1:64196374-64196393 | None:intergenic | 15.0% |
| !!! | GATGTCTATATAATTTTTTT+TGG | - | chr4_1:64196907-64196926 | Msa0563730:intron | 15.0% |
| !!! | ATAATTTTTTTTGGTATTGT+TGG | - | chr4_1:64196916-64196935 | Msa0563730:intron | 15.0% |
| !!! | GATTTTGTTTATATATGTTT+TGG | - | chr4_1:64196996-64197015 | Msa0563730:intron | 15.0% |
| !! | TAGTTATACTTATATCATAT+TGG | - | chr4_1:64197115-64197134 | Msa0563730:intron | 15.0% |
| !! | AGTTATACTTATATCATATT+GGG | - | chr4_1:64197116-64197135 | Msa0563730:intron | 15.0% |
| !!! | TTTTGATTATGAAATAATCT+CGG | - | chr4_1:64197314-64197333 | Msa0563730:intron | 15.0% |
| !!! | TAATTTGAAATTTCCATTTT+TGG | - | chr4_1:64198333-64198352 | Msa0563730:intron | 15.0% |
| !! | TCATATATTCATTAATAAAG+GGG | + | chr4_1:64198835-64198854 | None:intergenic | 15.0% |
| !! | AAATTAAGTATATGAATTTG+TGG | - | chr4_1:64198870-64198889 | Msa0563730:CDS | 15.0% |
| !!! | TTTTAATTGCATTATTTGAA+TGG | - | chr4_1:64199002-64199021 | Msa0563730:CDS | 15.0% |
| !! | TTAAACTATCAAAATCTCAT+AGG | - | chr4_1:64195226-64195245 | Msa0563730:intron | 20.0% |
| !! | AAATTCAATCAAGAAGTTAA+TGG | - | chr4_1:64195345-64195364 | Msa0563730:intron | 20.0% |
| !!! | ATTAGTAATTTTCACTTGAA+AGG | - | chr4_1:64195824-64195843 | Msa0563730:intron | 20.0% |
| !! | AAACTTTCTACATTAGTTAT+TGG | + | chr4_1:64196339-64196358 | None:intergenic | 20.0% |
| !! | ATAATGAGAAAAATCAGTAA+TGG | - | chr4_1:64196547-64196566 | Msa0563730:intron | 20.0% |
| !! | TAATGAGAAAAATCAGTAAT+GGG | - | chr4_1:64196548-64196567 | Msa0563730:intron | 20.0% |
| !!! | ATAAATACCAGTTTTAATGT+AGG | - | chr4_1:64196591-64196610 | Msa0563730:intron | 20.0% |
| !!! | ATTTTTTGGACAAATTACAA+TGG | + | chr4_1:64196653-64196672 | None:intergenic | 20.0% |
| !! | TCCAAAAAATTATCAAATAG+TGG | - | chr4_1:64196663-64196682 | Msa0563730:intron | 20.0% |
| !!! | ACCACTATTTGATAATTTTT+TGG | + | chr4_1:64196667-64196686 | None:intergenic | 20.0% |
| !!! | TTTATCATCTTTTAATAGTC+AGG | + | chr4_1:64196878-64196897 | None:intergenic | 20.0% |
| !! | GAAGATTATAGTTGAAAAAT+TGG | - | chr4_1:64196974-64196993 | Msa0563730:intron | 20.0% |
| !! | TATGATATAAGTATAACTAC+CGG | + | chr4_1:64197114-64197133 | None:intergenic | 20.0% |
| !! | TTCATAATCAAAATTTCATG+AGG | + | chr4_1:64197307-64197326 | None:intergenic | 20.0% |
| !! | AAATCTTACCTTAAAAAGTA+GGG | + | chr4_1:64197593-64197612 | None:intergenic | 20.0% |
| !! | AAAATCTTACCTTAAAAAGT+AGG | + | chr4_1:64197594-64197613 | None:intergenic | 20.0% |
| !!! | TAGCTATGTATATTGTTTTT+GGG | + | chr4_1:64198398-64198417 | None:intergenic | 20.0% |
| !!! | TTAGCTATGTATATTGTTTT+TGG | + | chr4_1:64198399-64198418 | None:intergenic | 20.0% |
| !! | AGTTTGAAAATTCAAATTCA+AGG | + | chr4_1:64198472-64198491 | None:intergenic | 20.0% |
| !!! | TGAATTTGAATTTTCAAACT+TGG | - | chr4_1:64198472-64198491 | Msa0563730:intron | 20.0% |
| !!! | AATGTCAAATTAATTGCTTT+TGG | + | chr4_1:64198754-64198773 | None:intergenic | 20.0% |
| !!! | TTTGACATTTTCCATTATTT+TGG | - | chr4_1:64198765-64198784 | Msa0563730:CDS | 20.0% |
| !! | ATATATTCATTAATAAAGGG+GGG | + | chr4_1:64198833-64198852 | None:intergenic | 20.0% |
| !! | CATATATTCATTAATAAAGG+GGG | + | chr4_1:64198834-64198853 | None:intergenic | 20.0% |
| !! | AATGATATAAGATAAACTGT+TGG | + | chr4_1:64199052-64199071 | None:intergenic | 20.0% |
| !! | TGAATACATAATTGATATGA+TGG | - | chr4_1:64199187-64199206 | Msa0563730:CDS | 20.0% |
| !! | GAATACATAATTGATATGAT+GGG | - | chr4_1:64199188-64199207 | Msa0563730:CDS | 20.0% |
| !! | GACAAAATTGGAGAAAATTT+TGG | + | chr4_1:64195115-64195134 | None:intergenic | 25.0% |
| ! | TAAGAAGAAAATGAAACACT+AGG | - | chr4_1:64195737-64195756 | Msa0563730:CDS | 25.0% |
| ! | AAGAAGAAAATGAAACACTA+GGG | - | chr4_1:64195738-64195757 | Msa0563730:CDS | 25.0% |
| ! | TAGTATTACCCAAAAAATGT+AGG | + | chr4_1:64196100-64196119 | None:intergenic | 25.0% |
| !!! | TACATTTTTTGGGTAATACT+AGG | - | chr4_1:64196099-64196118 | Msa0563730:intron | 25.0% |
| !!! | ACATTTTTTGGGTAATACTA+GGG | - | chr4_1:64196100-64196119 | Msa0563730:intron | 25.0% |
| ! | TAGAAAAATACTTGGCAATT+TGG | + | chr4_1:64196409-64196428 | None:intergenic | 25.0% |
| ! | CTGTAGTTTAGAAAAATACT+TGG | + | chr4_1:64196417-64196436 | None:intergenic | 25.0% |
| ! | AAGACAAAAATAAGCAAAAG+AGG | + | chr4_1:64196481-64196500 | None:intergenic | 25.0% |
| ! | TTCTAACCACATATATATAC+TGG | + | chr4_1:64196617-64196636 | None:intergenic | 25.0% |
| !!! | ATGTGATATAGCTTTATGAA+CGG | - | chr4_1:64196759-64196778 | Msa0563730:CDS | 25.0% |
| ! | TCTTCATTGTATATCATTCA+TGG | + | chr4_1:64196959-64196978 | None:intergenic | 25.0% |
| ! | TTTGGATGTGAAATTTAGTT+TGG | - | chr4_1:64197014-64197033 | Msa0563730:intron | 25.0% |
| !!! | TGATGATGTGTTTTCTTATT+TGG | - | chr4_1:64197075-64197094 | Msa0563730:intron | 25.0% |
| ! | AACTCAAGTTTAATTGAACA+GGG | - | chr4_1:64197243-64197262 | Msa0563730:intron | 25.0% |
| ! | TAATCAAAATTTCATGAGGT+GGG | + | chr4_1:64197303-64197322 | None:intergenic | 25.0% |
| ! | ATAATCAAAATTTCATGAGG+TGG | + | chr4_1:64197304-64197323 | None:intergenic | 25.0% |
| !! | ACTTGCTGATGTTAATATAA+CGG | - | chr4_1:64197438-64197457 | Msa0563730:intron | 25.0% |
| ! | TGCTAAAATCATGAAAAAGT+GGG | - | chr4_1:64197480-64197499 | Msa0563730:intron | 25.0% |
| ! | TTGAACAGAACAAATCAAAT+GGG | + | chr4_1:64197746-64197765 | None:intergenic | 25.0% |
| ! | ATTGAACAGAACAAATCAAA+TGG | + | chr4_1:64197747-64197766 | None:intergenic | 25.0% |
| !!! | TGATTTGTTCTGTTCAATTT+TGG | - | chr4_1:64197749-64197768 | Msa0563730:intron | 25.0% |
| ! | AAGATATCTTGTAGAACTTA+TGG | + | chr4_1:64198062-64198081 | None:intergenic | 25.0% |
| ! | AGGCGTATATTAAAAAACAA+TGG | - | chr4_1:64198201-64198220 | Msa0563730:intron | 25.0% |
| ! | GGCGTATATTAAAAAACAAT+GGG | - | chr4_1:64198202-64198221 | Msa0563730:intron | 25.0% |
| ! | CAGTTGAACTCAAATAAATT+GGG | + | chr4_1:64198507-64198526 | None:intergenic | 25.0% |
| ! | TCAGTTGAACTCAAATAAAT+TGG | + | chr4_1:64198508-64198527 | None:intergenic | 25.0% |
| ! | TAAAAGTCATACAAAGATCA+AGG | + | chr4_1:64198987-64199006 | None:intergenic | 25.0% |
| TATTCTTGGAAAGACTTTCA+AGG | - | chr4_1:64195170-64195189 | Msa0563730:intron | 30.0% | |
| ATTCTTGGAAAGACTTTCAA+GGG | - | chr4_1:64195171-64195190 | Msa0563730:intron | 30.0% | |
| TTCAATTTCCCATCAACATT+GGG | + | chr4_1:64195312-64195331 | None:intergenic | 30.0% | |
| ATTCAATTTCCCATCAACAT+TGG | + | chr4_1:64195313-64195332 | None:intergenic | 30.0% | |
| AAAGATAAGTAACAATGCGA+AGG | - | chr4_1:64195395-64195414 | Msa0563730:intron | 30.0% | |
| TTTAGAAGTTGAAAATGCGA+AGG | - | chr4_1:64195518-64195537 | Msa0563730:intron | 30.0% | |
| TTAGAAGTTGAAAATGCGAA+GGG | - | chr4_1:64195519-64195538 | Msa0563730:intron | 30.0% | |
| ACAAACAAGAAACTTGAAGT+AGG | - | chr4_1:64195630-64195649 | Msa0563730:intron | 30.0% | |
| CAAACAAGAAACTTGAAGTA+GGG | - | chr4_1:64195631-64195650 | Msa0563730:intron | 30.0% | |
| ATACTATCTTAGAGCATAAG+AGG | - | chr4_1:64195873-64195892 | Msa0563730:intron | 30.0% | |
| ! | TTGAAGATTTTTCACCTGTA+AGG | - | chr4_1:64195997-64196016 | Msa0563730:intron | 30.0% |
| AAAAATGTAAGCAACCTTAC+AGG | + | chr4_1:64196014-64196033 | None:intergenic | 30.0% | |
| !!! | ATTCCTGTCCTACATTTTTT+GGG | - | chr4_1:64196089-64196108 | Msa0563730:intron | 30.0% |
| TTGTAAAGTTGTGTACATTG+TGG | - | chr4_1:64196184-64196203 | Msa0563730:intron | 30.0% | |
| TTGCTTCTTGATTTCTTTGT+AGG | - | chr4_1:64196242-64196261 | Msa0563730:intron | 30.0% | |
| TGATTGCAACCATTAGTTAT+TGG | - | chr4_1:64196307-64196326 | Msa0563730:intron | 30.0% | |
| TTATCAACCATTCTTATCCA+TGG | + | chr4_1:64196531-64196550 | None:intergenic | 30.0% | |
| ATATATGTGGTTAGAAACCT+TGG | - | chr4_1:64196621-64196640 | Msa0563730:intron | 30.0% | |
| AATTACAATGGATAATGCCA+AGG | + | chr4_1:64196641-64196660 | None:intergenic | 30.0% | |
| CTCATGAATGATATTGTTGA+AGG | - | chr4_1:64196819-64196838 | Msa0563730:CDS | 30.0% | |
| TTAATAGTCAGGTTTCAACA+TGG | + | chr4_1:64196867-64196886 | None:intergenic | 30.0% | |
| ! | TTTGGTTTCATGCTGTTTAT+GGG | - | chr4_1:64197032-64197051 | Msa0563730:intron | 30.0% |
| !! | CAGACTATGTTTTTATCTCT+GGG | - | chr4_1:64197155-64197174 | Msa0563730:intron | 30.0% |
| !! | ATGGGTTTTATGATGTCTAT+GGG | - | chr4_1:64197217-64197236 | Msa0563730:intron | 30.0% |
| CAACTCAAGTTTAATTGAAC+AGG | - | chr4_1:64197242-64197261 | Msa0563730:intron | 30.0% | |
| TATTAACATCAGCAAGTTTC+TGG | + | chr4_1:64197435-64197454 | None:intergenic | 30.0% | |
| CTTGCTGATGTTAATATAAC+GGG | - | chr4_1:64197439-64197458 | Msa0563730:intron | 30.0% | |
| CTGCTAAAATCATGAAAAAG+TGG | - | chr4_1:64197479-64197498 | Msa0563730:intron | 30.0% | |
| ! | AATGCTTTTCATTTGTCCAA+TGG | - | chr4_1:64197803-64197822 | Msa0563730:intron | 30.0% |
| TTTAATGTGAATGTTGCCAT+TGG | + | chr4_1:64197822-64197841 | None:intergenic | 30.0% | |
| AATGGCAACATTCACATTAA+AGG | - | chr4_1:64197821-64197840 | Msa0563730:intron | 30.0% | |
| ! | ATTCACATTAAAGGCATGTT+TGG | - | chr4_1:64197830-64197849 | Msa0563730:intron | 30.0% |
| !!! | TAAGTACTTTTGAGACTGTT+TGG | - | chr4_1:64197882-64197901 | Msa0563730:intron | 30.0% |
| !!! | AAGTACTTTTGAGACTGTTT+GGG | - | chr4_1:64197883-64197902 | Msa0563730:intron | 30.0% |
| TTGTAGAACTTATGGAAATC+AGG | + | chr4_1:64198054-64198073 | None:intergenic | 30.0% | |
| ! | TTAAGTCTTTTATCCAAGCA+AGG | - | chr4_1:64198181-64198200 | Msa0563730:intron | 30.0% |
| ! | TTTTTAATATACGCCTTGCT+TGG | + | chr4_1:64198197-64198216 | None:intergenic | 30.0% |
| AAACAATGGGAAATGTTAAC+CGG | - | chr4_1:64198215-64198234 | Msa0563730:intron | 30.0% | |
| AATATAGTAGTATCTTGCCT+TGG | - | chr4_1:64198266-64198285 | Msa0563730:intron | 30.0% | |
| ! | TGAACTTCTTTTATCTCTCT+CGG | - | chr4_1:64198421-64198440 | Msa0563730:intron | 30.0% |
| GTTTGATGAATGATGACAAT+TGG | - | chr4_1:64198656-64198675 | Msa0563730:CDS | 30.0% | |
| TTGCAATGCATCCAAAATAA+TGG | + | chr4_1:64198779-64198798 | None:intergenic | 30.0% | |
| ! | AACTCTTCATGTCATTTAGA+TGG | - | chr4_1:64198799-64198818 | Msa0563730:CDS | 30.0% |
| TTAATTTATCGCAGACTAGT+TGG | - | chr4_1:64198924-64198943 | Msa0563730:CDS | 30.0% | |
| GATATAAGATAAACTGTTGG+TGG | + | chr4_1:64199049-64199068 | None:intergenic | 30.0% | |
| ATCCAACATTAACACAAGAT+CGG | + | chr4_1:64199130-64199149 | None:intergenic | 30.0% | |
| TTTAGATGATTCACAACGAC+CGG | + | chr4_1:64195070-64195089 | None:intergenic | 35.0% | |
| ATTGTCAGCAGAGACAAAAT+TGG | + | chr4_1:64195127-64195146 | None:intergenic | 35.0% | |
| ! | AATTTTGTCTCTGCTGACAA+TGG | - | chr4_1:64195126-64195145 | Msa0563730:CDS | 35.0% |
| CAACACAATCATCTGTTATG+TGG | + | chr4_1:64195266-64195285 | None:intergenic | 35.0% | |
| AAAGAGTTTCCCAATGTTGA+TGG | - | chr4_1:64195300-64195319 | Msa0563730:intron | 35.0% | |
| AAGAGTTTCCCAATGTTGAT+GGG | - | chr4_1:64195301-64195320 | Msa0563730:intron | 35.0% | |
| TTCTAAGCAACAGAAAGAGA+TGG | - | chr4_1:64195368-64195387 | Msa0563730:intron | 35.0% | |
| TAGATGTCAGGTCAAAAAAG+AGG | - | chr4_1:64195451-64195470 | Msa0563730:intron | 35.0% | |
| TGAGAAGGAGAAAATGCAAA+GGG | - | chr4_1:64195488-64195507 | Msa0563730:intron | 35.0% | |
| AACTTTATGCTGCAGAGAAA+AGG | - | chr4_1:64195664-64195683 | Msa0563730:intron | 35.0% | |
| GAGAAAAGGAAGAATCAAGA+TGG | - | chr4_1:64195678-64195697 | Msa0563730:intron | 35.0% | |
| ! | AGAGAGAATTGAAAGTACGT+CGG | - | chr4_1:64195704-64195723 | Msa0563730:CDS | 35.0% |
| GAAAATGAAACACTAGGGTT+AGG | - | chr4_1:64195743-64195762 | Msa0563730:CDS | 35.0% | |
| CTAGGGTTAGGCTTAAATTT+AGG | - | chr4_1:64195755-64195774 | Msa0563730:CDS | 35.0% | |
| TTGAAAGGTTGCTTACATTG+TGG | - | chr4_1:64195839-64195858 | Msa0563730:intron | 35.0% | |
| TCTCCTACACTGTTATACTA+GGG | - | chr4_1:64195914-64195933 | Msa0563730:intron | 35.0% | |
| TAACCCTAGTATAACAGTGT+AGG | + | chr4_1:64195920-64195939 | None:intergenic | 35.0% | |
| !!! | GATTCCTGTCCTACATTTTT+TGG | - | chr4_1:64196088-64196107 | Msa0563730:intron | 35.0% |
| TTACCCAAAAAATGTAGGAC+AGG | + | chr4_1:64196095-64196114 | None:intergenic | 35.0% | |
| TGGCTATCACCAATAACTAA+TGG | + | chr4_1:64196319-64196338 | None:intergenic | 35.0% | |
| TTGGCAATTTGGAAATTGAG+TGG | + | chr4_1:64196398-64196417 | None:intergenic | 35.0% | |
| ! | ATACTGGCCTACATTAAAAC+TGG | + | chr4_1:64196601-64196620 | None:intergenic | 35.0% |
| TGTAGGCCAGTATATATATG+TGG | - | chr4_1:64196608-64196627 | Msa0563730:intron | 35.0% | |
| ! | GTTTGGTTTCATGCTGTTTA+TGG | - | chr4_1:64197031-64197050 | Msa0563730:intron | 35.0% |
| ATTTGGCGAAAGTGAAAAAC+CGG | - | chr4_1:64197092-64197111 | Msa0563730:intron | 35.0% | |
| !! | GCAGACTATGTTTTTATCTC+TGG | - | chr4_1:64197154-64197173 | Msa0563730:intron | 35.0% |
| !! | GATGGGTTTTATGATGTCTA+TGG | - | chr4_1:64197216-64197235 | Msa0563730:intron | 35.0% |
| AACAGAACACTCTTCAAACA+AGG | + | chr4_1:64197391-64197410 | None:intergenic | 35.0% | |
| !! | ATTTTAGCAGCATTACCAAC+TGG | + | chr4_1:64197469-64197488 | None:intergenic | 35.0% |
| TTTAGACATCATCCTGTTGT+AGG | - | chr4_1:64197690-64197709 | Msa0563730:intron | 35.0% | |
| AAATGTATTCCACCTACAAC+AGG | + | chr4_1:64197705-64197724 | None:intergenic | 35.0% | |
| !!! | GTTCAATTTTGGAGTGTGTA+TGG | - | chr4_1:64197760-64197779 | Msa0563730:intron | 35.0% |
| CAATGACAACACAATTTCCA+AGG | + | chr4_1:64198286-64198305 | None:intergenic | 35.0% | |
| ! | GAACTTCTTTTATCTCTCTC+GGG | - | chr4_1:64198422-64198441 | Msa0563730:intron | 35.0% |
| ATGCTTAGTTACTTGCTCAT+AGG | - | chr4_1:64198547-64198566 | Msa0563730:intron | 35.0% | |
| CATTCATCAAACTATGCAAG+AGG | + | chr4_1:64198648-64198667 | None:intergenic | 35.0% | |
| ATTAAACGATTGTTCCCTCA+CGG | + | chr4_1:64198909-64198928 | None:intergenic | 35.0% | |
| ! | CATTTTGCTCCTCTCATATT+TGG | - | chr4_1:64199075-64199094 | Msa0563730:CDS | 35.0% |
| !!! | TAGTTTTGAATCTGACTGCT+GGG | + | chr4_1:64199245-64199264 | None:intergenic | 35.0% |
| !!! | ATAGTTTTGAATCTGACTGC+TGG | + | chr4_1:64199246-64199265 | None:intergenic | 35.0% |
| AGTCAGATTCAAAACTATGC+TGG | - | chr4_1:64199248-64199267 | Msa0563730:CDS | 35.0% | |
| AGATTCAAAACTATGCTGGT+TGG | - | chr4_1:64199252-64199271 | Msa0563730:CDS | 35.0% | |
| ! | GATTCAAAACTATGCTGGTT+GGG | - | chr4_1:64199253-64199272 | Msa0563730:CDS | 35.0% |
| GGAGGCTATGATGTTATTCT+TGG | - | chr4_1:64195156-64195175 | Msa0563730:intron | 40.0% | |
| ! | GTTTAAGTTCCTTGTGAAGC+TGG | + | chr4_1:64195212-64195231 | None:intergenic | 40.0% |
| AACAATGCGAAGGTTGAAAG+CGG | - | chr4_1:64195405-64195424 | Msa0563730:intron | 40.0% | |
| ! | CATTTTCTCCTTCTCACTCA+CGG | + | chr4_1:64195484-64195503 | None:intergenic | 40.0% |
| GTGAGAAGGAGAAAATGCAA+AGG | - | chr4_1:64195487-64195506 | Msa0563730:intron | 40.0% | |
| ! | GAGAGAATTGAAAGTACGTC+GGG | - | chr4_1:64195705-64195724 | Msa0563730:CDS | 40.0% |
| CTAGTATAACAGTGTAGGAG+AGG | + | chr4_1:64195915-64195934 | None:intergenic | 40.0% | |
| CTCTCCTACACTGTTATACT+AGG | - | chr4_1:64195913-64195932 | Msa0563730:intron | 40.0% | |
| GAAGAAGCAAAAGAGAACAG+AGG | + | chr4_1:64196450-64196469 | None:intergenic | 40.0% | |
| ! | TTCTCTTTTGCTTCTTCCTC+TGG | - | chr4_1:64196453-64196472 | Msa0563730:intron | 40.0% |
| ATAAGCAAAAGAGGAACCAG+AGG | + | chr4_1:64196472-64196491 | None:intergenic | 40.0% | |
| AACACAGCCATGGATAAGAA+TGG | - | chr4_1:64196521-64196540 | Msa0563730:intron | 40.0% | |
| AAAAGTGGGATAGCGTATAG+CGG | + | chr4_1:64196695-64196714 | None:intergenic | 40.0% | |
| !! | CTATACGCTATCCCACTTTT+GGG | - | chr4_1:64196695-64196714 | Msa0563730:intron | 40.0% |
| !! | TATACGCTATCCCACTTTTG+GGG | - | chr4_1:64196696-64196715 | Msa0563730:intron | 40.0% |
| ACATCCATAGTAGTTAACCC+CGG | + | chr4_1:64196743-64196762 | None:intergenic | 40.0% | |
| TGCTTATGACGAGAAAGTGA+TGG | - | chr4_1:64197194-64197213 | Msa0563730:intron | 40.0% | |
| ! | TATGACGAGAAAGTGATGGA+TGG | - | chr4_1:64197198-64197217 | Msa0563730:intron | 40.0% |
| !! | ATGACGAGAAAGTGATGGAT+GGG | - | chr4_1:64197199-64197218 | Msa0563730:intron | 40.0% |
| ! | GTTTTCAGATCCACCAACAA+TGG | + | chr4_1:64197276-64197295 | None:intergenic | 40.0% |
| ! | TTGTTGGTGGATCTGAAAAC+TGG | - | chr4_1:64197276-64197295 | Msa0563730:CDS | 40.0% |
| ! | TGTTGGTGGATCTGAAAACT+GGG | - | chr4_1:64197277-64197296 | Msa0563730:CDS | 40.0% |
| AACACTCTTCAAACAAGGCA+CGG | + | chr4_1:64197386-64197405 | None:intergenic | 40.0% | |
| !! | GAGTGTTCTGTTTCTGAACT+AGG | - | chr4_1:64197399-64197418 | Msa0563730:intron | 40.0% |
| !! | TCATGAAAAAGTGGGCTATG+AGG | - | chr4_1:64197488-64197507 | Msa0563730:intron | 40.0% |
| ! | AGGAAGGACAAAAGCTCTAA+AGG | + | chr4_1:64197533-64197552 | None:intergenic | 40.0% |
| !!! | TCACAGAGCCCTACTTTTTA+AGG | - | chr4_1:64197582-64197601 | Msa0563730:intron | 40.0% |
| !!! | CCATTTTTGGCTTCCTTAAC+CGG | - | chr4_1:64198346-64198365 | Msa0563730:intron | 40.0% |
| ATTCCCTGCATGCTTGTAAA+AGG | - | chr4_1:64198576-64198595 | Msa0563730:intron | 40.0% | |
| TTCCCTGCATGCTTGTAAAA+GGG | - | chr4_1:64198577-64198596 | Msa0563730:intron | 40.0% | |
| ! | TTCCCTTTTACAAGCATGCA+GGG | + | chr4_1:64198582-64198601 | None:intergenic | 40.0% |
| GTAAAAGGGAACTATTACGC+AGG | - | chr4_1:64198591-64198610 | Msa0563730:intron | 40.0% | |
| TATTACGCAGGAACTGATGA+TGG | - | chr4_1:64198603-64198622 | Msa0563730:intron | 40.0% | |
| ATTACGCAGGAACTGATGAT+GGG | - | chr4_1:64198604-64198623 | Msa0563730:intron | 40.0% | |
| TGCGGCGACAAAGTATAATA+AGG | + | chr4_1:64198704-64198723 | None:intergenic | 40.0% | |
| GTAGATGTGATTATCCGTGA+GGG | - | chr4_1:64198892-64198911 | Msa0563730:CDS | 40.0% | |
| ! | CAGACTAGTTGGTACATTCT+TGG | - | chr4_1:64198935-64198954 | Msa0563730:CDS | 40.0% |
| ATCAAGGCAAGTGTAAGTTG+CGG | + | chr4_1:64198971-64198990 | None:intergenic | 40.0% | |
| CTCCTCTCATATTTGGCAAA+CGG | - | chr4_1:64199082-64199101 | Msa0563730:CDS | 40.0% | |
| ! | GCACAGTTAGCCTAAATAGA+AGG | + | chr4_1:64199108-64199127 | None:intergenic | 40.0% |
| TGCCGATCTTGTGTTAATGT+TGG | - | chr4_1:64199125-64199144 | Msa0563730:CDS | 40.0% | |
| GTTGGGATTTCAGAGATTGT+AGG | - | chr4_1:64199270-64199289 | Msa0563730:CDS | 40.0% | |
| GATTCACAACGACCGGTAAT+CGG | + | chr4_1:64195063-64195082 | None:intergenic | 45.0% | |
| !! | GGAGAAAATTTTGGCAGCTC+TGG | + | chr4_1:64195106-64195125 | None:intergenic | 45.0% |
| GGGACAAGAACAACAGAAAG+AGG | - | chr4_1:64195539-64195558 | Msa0563730:intron | 45.0% | |
| CTAAGCAATGATGCGAAGAG+TGG | - | chr4_1:64195573-64195592 | Msa0563730:intron | 45.0% | |
| GTCCTCGGGACATAGAAATT+AGG | - | chr4_1:64195607-64195626 | Msa0563730:intron | 45.0% | |
| GTCCTAATTTCTATGTCCCG+AGG | + | chr4_1:64195612-64195631 | None:intergenic | 45.0% | |
| GTTTGTGTACAACACAGCCA+TGG | - | chr4_1:64196511-64196530 | Msa0563730:intron | 45.0% | |
| GGGTGAAATATACGCAGCAA+TGG | - | chr4_1:64196568-64196587 | Msa0563730:intron | 45.0% | |
| AAAGTGGGATAGCGTATAGC+GGG | + | chr4_1:64196694-64196713 | None:intergenic | 45.0% | |
| ! | GCTATACGCTATCCCACTTT+TGG | - | chr4_1:64196694-64196713 | Msa0563730:intron | 45.0% |
| TAGTAGTTAACCCCGGATAG+CGG | + | chr4_1:64196736-64196755 | None:intergenic | 45.0% | |
| CTATCCGGGGTTAACTACTA+TGG | - | chr4_1:64196736-64196755 | Msa0563730:intron | 45.0% | |
| GGTTTCAACATGGCAAAGAC+AGG | + | chr4_1:64196857-64196876 | None:intergenic | 45.0% | |
| ACAGGGAAAGATGCCATTGT+TGG | - | chr4_1:64197260-64197279 | Msa0563730:CDS | 45.0% | |
| ACACTCTTCAAACAAGGCAC+GGG | + | chr4_1:64197385-64197404 | None:intergenic | 45.0% | |
| !! | AATATAACGGGTCGACCAGT+TGG | - | chr4_1:64197451-64197470 | Msa0563730:intron | 45.0% |
| ! | AGAGCTTTTGTCCTTCCTCT+TGG | - | chr4_1:64197535-64197554 | Msa0563730:intron | 45.0% |
| CTAACATCTAGACAGCCAAG+AGG | + | chr4_1:64197553-64197572 | None:intergenic | 45.0% | |
| AGACATCATCCTGTTGTAGG+TGG | - | chr4_1:64197693-64197712 | Msa0563730:intron | 45.0% | |
| CCGGTTAAGGAAGCCAAAAA+TGG | + | chr4_1:64198349-64198368 | None:intergenic | 45.0% | |
| GGCAGAGAACATTTACTTGC+AGG | - | chr4_1:64198443-64198462 | Msa0563730:intron | 45.0% | |
| ! | GTTCCCTTTTACAAGCATGC+AGG | + | chr4_1:64198583-64198602 | None:intergenic | 45.0% |
| ! | TTACGCAGGAACTGATGATG+GGG | - | chr4_1:64198605-64198624 | Msa0563730:intron | 45.0% |
| GGTAGATGTGATTATCCGTG+AGG | - | chr4_1:64198891-64198910 | Msa0563730:CDS | 45.0% | |
| TGGCAAACGGCCTTCTATTT+AGG | - | chr4_1:64199095-64199114 | Msa0563730:CDS | 45.0% | |
| !! | ATTGATATGATGGGTGCTCC+TGG | - | chr4_1:64199197-64199216 | Msa0563730:CDS | 45.0% |
| !! | TCAGCATGAATAAGAGCACC+AGG | + | chr4_1:64199218-64199237 | None:intergenic | 45.0% |
| !! | AATAAATATCAAATAAATTT+AGG | + | chr4_1:64196131-64196150 | None:intergenic | 5.0% |
| TCTGCTGACAATGGTGCTTC+AGG | - | chr4_1:64195135-64195154 | Msa0563730:CDS | 50.0% | |
| CTTGCTCAACCAGCTTCACA+AGG | - | chr4_1:64195200-64195219 | Msa0563730:intron | 50.0% | |
| AATGCGAAGGTTGAAAGCGG+AGG | - | chr4_1:64195408-64195427 | Msa0563730:intron | 50.0% | |
| ATGCGAAGGTTGAAAGCGGA+GGG | - | chr4_1:64195409-64195428 | Msa0563730:intron | 50.0% | |
| GAATGAAGCCGTGAGTGAGA+AGG | - | chr4_1:64195473-64195492 | Msa0563730:intron | 50.0% | |
| AGCAATGATGCGAAGAGTGG+AGG | - | chr4_1:64195576-64195595 | Msa0563730:intron | 50.0% | |
| GCAATGATGCGAAGAGTGGA+GGG | - | chr4_1:64195577-64195596 | Msa0563730:intron | 50.0% | |
| TAGCAGCCAACCCCAAAAGT+GGG | + | chr4_1:64196709-64196728 | None:intergenic | 50.0% | |
| GGGAAAGATGCCATTGTTGG+TGG | - | chr4_1:64197263-64197282 | Msa0563730:CDS | 50.0% | |
| CATCTAGACAGCCAAGAGGA+AGG | + | chr4_1:64197549-64197568 | None:intergenic | 50.0% | |
| CTCAAGAGTCTGGACTACTG+CGG | + | chr4_1:64198722-64198741 | None:intergenic | 50.0% | |
| AGTAGTCCAGACTCTTGAGG+CGG | - | chr4_1:64198723-64198742 | Msa0563730:CDS | 50.0% | |
| GGCCGTTTGCCAAATATGAG+AGG | + | chr4_1:64199087-64199106 | None:intergenic | 50.0% | |
| GCTGACAATGGTGCTTCAGG+AGG | - | chr4_1:64195138-64195157 | Msa0563730:CDS | 55.0% | |
| CTCCTCGGGATGTAGATGTC+AGG | - | chr4_1:64195439-64195458 | Msa0563730:intron | 55.0% | |
| GACCTGACATCTACATCCCG+AGG | + | chr4_1:64195444-64195463 | None:intergenic | 55.0% | |
| TCTATGTCCCGAGGACCCAT+CGG | + | chr4_1:64195603-64195622 | None:intergenic | 55.0% | |
| !!! | CGCTATCCCACTTTTGGGGT+TGG | - | chr4_1:64196700-64196719 | Msa0563730:intron | 55.0% |
| GTAGCAGCCAACCCCAAAAG+TGG | + | chr4_1:64196710-64196729 | None:intergenic | 55.0% | |
| GAAATGTTAACCGGTGCCCC+CGG | - | chr4_1:64198224-64198243 | Msa0563730:intron | 55.0% | |
| AAATGTTAACCGGTGCCCCC+GGG | - | chr4_1:64198225-64198244 | Msa0563730:intron | 55.0% | |
| TGACTCCTTAACCAGTGCCC+CGG | + | chr4_1:64198246-64198265 | None:intergenic | 55.0% | |
| TCATGTTAACCAGTGCCCCG+GGG | + | chr4_1:64198375-64198394 | None:intergenic | 55.0% | |
| GTCATGTTAACCAGTGCCCC+GGG | + | chr4_1:64198376-64198395 | None:intergenic | 55.0% | |
| GGTCATGTTAACCAGTGCCC+CGG | + | chr4_1:64198377-64198396 | None:intergenic | 55.0% | |
| CGCAGTAGTCCAGACTCTTG+AGG | - | chr4_1:64198720-64198739 | Msa0563730:CDS | 55.0% | |
| GAATCTCCGCCTCAAGAGTC+TGG | + | chr4_1:64198732-64198751 | None:intergenic | 55.0% | |
| !! | GCGGAGGGTTAGTTGCTCCT+CGG | - | chr4_1:64195424-64195443 | Msa0563730:intron | 60.0% |
| !! | CGGAGGGTTAGTTGCTCCTC+GGG | - | chr4_1:64195425-64195444 | Msa0563730:intron | 60.0% |
| AATGTTAACCGGTGCCCCCG+GGG | - | chr4_1:64198226-64198245 | Msa0563730:intron | 60.0% | |
| ACTCCTTAACCAGTGCCCCG+GGG | + | chr4_1:64198244-64198263 | None:intergenic | 60.0% | |
| GACTCCTTAACCAGTGCCCC+GGG | + | chr4_1:64198245-64198264 | None:intergenic | 60.0% | |
| CATGTTAACCAGTGCCCCGG+GGG | + | chr4_1:64198374-64198393 | None:intergenic | 60.0% | |
| TGCGAAGAGTGGAGGGCCGA+TGG | - | chr4_1:64195584-64195603 | Msa0563730:intron | 65.0% | |
| GCGAAGAGTGGAGGGCCGAT+GGG | - | chr4_1:64195585-64195604 | Msa0563730:intron | 65.0% | |
| GGCTGCTACGCACCGCTATC+CGG | - | chr4_1:64196721-64196740 | Msa0563730:intron | 65.0% | |
| GCTGCTACGCACCGCTATCC+GGG | - | chr4_1:64196722-64196741 | Msa0563730:intron | 65.0% | |
| CTGCTACGCACCGCTATCCG+GGG | - | chr4_1:64196723-64196742 | Msa0563730:intron | 65.0% | |
| CTCCTTAACCAGTGCCCCGG+GGG | + | chr4_1:64198243-64198262 | None:intergenic | 65.0% | |
| GCTTCCTTAACCGGTGCCCC+CGG | - | chr4_1:64198355-64198374 | Msa0563730:intron | 65.0% | |
| CTTCCTTAACCGGTGCCCCC+GGG | - | chr4_1:64198356-64198375 | Msa0563730:intron | 65.0% | |
| TTCCTTAACCGGTGCCCCCG+GGG | - | chr4_1:64198357-64198376 | Msa0563730:intron | 65.0% | |
| GTGGAGGGCCGATGGGTCCT+CGG | - | chr4_1:64195592-64195611 | Msa0563730:intron | 70.0% | |
| TGGAGGGCCGATGGGTCCTC+GGG | - | chr4_1:64195593-64195612 | Msa0563730:intron | 70.0% | |
| !! | TGCCCCCGGGGCACTGGTTA+AGG | - | chr4_1:64198238-64198257 | Msa0563730:intron | 70.0% |
| ! | AACCAGTGCCCCGGGGGCAC+CGG | + | chr4_1:64198237-64198256 | None:intergenic | 75.0% |
| !! | TGCCCCGGGGGCACCGGTTA+AGG | + | chr4_1:64198231-64198250 | None:intergenic | 75.0% |
| ! | AACCAGTGCCCCGGGGGCAC+CGG | + | chr4_1:64198237-64198256 | None:intergenic | 75.0% |
| ! | AACCGGTGCCCCCGGGGCAC+TGG | - | chr4_1:64198232-64198251 | Msa0563730:intron | 80.0% |
| ! | AACCGGTGCCCCCGGGGCAC+TGG | - | chr4_1:64198232-64198251 | Msa0563730:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 64195057 | 64199301 | 64195057 | ID=Msa0563730;Name=Msa0563730 |
| chr4_1 | mRNA | 64195057 | 64199301 | 64195057 | ID=Msa0563730-mRNA-1;Parent=Msa0563730;Name=Msa0563730-mRNA-1;_AED=0.21;_eAED=0.26;_QI=0|0|0|0.8|1|1|5|0|371 |
| chr4_1 | exon | 64198641 | 64199301 | 64198641 | ID=Msa0563730-mRNA-1:exon:20517;Parent=Msa0563730-mRNA-1 |
| chr4_1 | exon | 64197256 | 64197326 | 64197256 | ID=Msa0563730-mRNA-1:exon:20516;Parent=Msa0563730-mRNA-1 |
| chr4_1 | exon | 64196755 | 64196922 | 64196755 | ID=Msa0563730-mRNA-1:exon:20515;Parent=Msa0563730-mRNA-1 |
| chr4_1 | exon | 64195703 | 64195803 | 64195703 | ID=Msa0563730-mRNA-1:exon:20514;Parent=Msa0563730-mRNA-1 |
| chr4_1 | exon | 64195057 | 64195171 | 64195057 | ID=Msa0563730-mRNA-1:exon:20513;Parent=Msa0563730-mRNA-1 |
| chr4_1 | CDS | 64198641 | 64199301 | 64198641 | ID=Msa0563730-mRNA-1:cds;Parent=Msa0563730-mRNA-1 |
| chr4_1 | CDS | 64197256 | 64197326 | 64197256 | ID=Msa0563730-mRNA-1:cds;Parent=Msa0563730-mRNA-1 |
| chr4_1 | CDS | 64196755 | 64196922 | 64196755 | ID=Msa0563730-mRNA-1:cds;Parent=Msa0563730-mRNA-1 |
| chr4_1 | CDS | 64195703 | 64195803 | 64195703 | ID=Msa0563730-mRNA-1:cds;Parent=Msa0563730-mRNA-1 |
| chr4_1 | CDS | 64195057 | 64195171 | 64195057 | ID=Msa0563730-mRNA-1:cds;Parent=Msa0563730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
