Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0564390 | XP_003629679.1 | 98.039 | 408 | 8 | 0 | 1 | 408 | 1 | 408 | 0.0 | 801 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0564390 | sp|Q6GL77|UBXN1_XENTR | 33.195 | 241 | 126 | 5 | 114 | 327 | 7 | 239 | 6.33e-16 | 80.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0564390 | G7LHW1 | 98.039 | 408 | 8 | 0 | 1 | 408 | 1 | 408 | 0.0 | 801 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0564390 | 0.822995 | 1.757778e-53 | -8.615850e-47 |
| Msa0006110 | Msa0564390 | 0.820355 | 7.166996e-53 | -8.615850e-47 |
| Msa0021510 | Msa0564390 | 0.802703 | 4.947645e-49 | -8.615850e-47 |
| Msa0032430 | Msa0564390 | 0.806899 | 6.574650e-50 | -8.615850e-47 |
| Msa0037570 | Msa0564390 | -0.812443 | 4.229008e-51 | -8.615850e-47 |
| Msa0044000 | Msa0564390 | 0.801128 | 1.041941e-48 | -8.615850e-47 |
| Msa0044260 | Msa0564390 | 0.810551 | 1.089543e-50 | -8.615850e-47 |
| Msa0044330 | Msa0564390 | 0.811758 | 5.965331e-51 | -8.615850e-47 |
| Msa0045790 | Msa0564390 | 0.808651 | 2.789583e-50 | -8.615850e-47 |
| Msa0046160 | Msa0564390 | 0.805444 | 1.330936e-49 | -8.615850e-47 |
| Msa0054480 | Msa0564390 | 0.800447 | 1.435402e-48 | -8.615850e-47 |
| Msa0056530 | Msa0564390 | 0.805255 | 1.458090e-49 | -8.615850e-47 |
| Msa0068740 | Msa0564390 | -0.810677 | 1.023350e-50 | -8.615850e-47 |
| Msa0079180 | Msa0564390 | 0.823328 | 1.469231e-53 | -8.615850e-47 |
| Msa0079380 | Msa0564390 | 0.812675 | 3.762396e-51 | -8.615850e-47 |
| Msa0084380 | Msa0564390 | 0.845918 | 3.009377e-59 | -8.615850e-47 |
| Msa0116850 | Msa0564390 | 0.811289 | 7.543389e-51 | -8.615850e-47 |
| Msa0127800 | Msa0564390 | 0.805647 | 1.206607e-49 | -8.615850e-47 |
| Msa0131330 | Msa0564390 | 0.810396 | 1.176969e-50 | -8.615850e-47 |
| Msa0165210 | Msa0564390 | 0.802523 | 5.387147e-49 | -8.615850e-47 |
| Msa0172070 | Msa0564390 | 0.805827 | 1.106081e-49 | -8.615850e-47 |
| Msa0179430 | Msa0564390 | 0.801109 | 1.051539e-48 | -8.615850e-47 |
| Msa0208090 | Msa0564390 | 0.826997 | 1.994784e-54 | -8.615850e-47 |
| Msa0211150 | Msa0564390 | 0.811206 | 7.860702e-51 | -8.615850e-47 |
| Msa0212990 | Msa0564390 | 0.809754 | 1.618365e-50 | -8.615850e-47 |
| Msa0220580 | Msa0564390 | 0.802738 | 4.866231e-49 | -8.615850e-47 |
| Msa0222620 | Msa0564390 | 0.800328 | 1.517343e-48 | -8.615850e-47 |
| Msa0388950 | Msa0564390 | 0.846053 | 2.765864e-59 | -8.615850e-47 |
| Msa0390070 | Msa0564390 | 0.829851 | 4.083664e-55 | -8.615850e-47 |
| Msa0398790 | Msa0564390 | 0.804816 | 1.801318e-49 | -8.615850e-47 |
| Msa0435230 | Msa0564390 | 0.800424 | 1.450540e-48 | -8.615850e-47 |
| Msa0440400 | Msa0564390 | 0.809919 | 1.491360e-50 | -8.615850e-47 |
| Msa0440750 | Msa0564390 | 0.812469 | 4.172938e-51 | -8.615850e-47 |
| Msa0452710 | Msa0564390 | 0.816614 | 5.049521e-52 | -8.615850e-47 |
| Msa0457960 | Msa0564390 | 0.853019 | 3.150975e-61 | -8.615850e-47 |
| Msa0257460 | Msa0564390 | 0.832565 | 8.791962e-56 | -8.615850e-47 |
| Msa0267370 | Msa0564390 | 0.826404 | 2.763832e-54 | -8.615850e-47 |
| Msa0275000 | Msa0564390 | 0.838747 | 2.393671e-57 | -8.615850e-47 |
| Msa0280090 | Msa0564390 | 0.822014 | 2.970279e-53 | -8.615850e-47 |
| Msa0321310 | Msa0564390 | 0.831423 | 1.683701e-55 | -8.615850e-47 |
| Msa0339250 | Msa0564390 | 0.808031 | 3.781587e-50 | -8.615850e-47 |
| Msa0342310 | Msa0564390 | 0.802011 | 6.869810e-49 | -8.615850e-47 |
| Msa0345970 | Msa0564390 | 0.802369 | 5.798030e-49 | -8.615850e-47 |
| Msa0512750 | Msa0564390 | 0.803725 | 3.038975e-49 | -8.615850e-47 |
| Msa0529040 | Msa0564390 | 0.800963 | 1.126047e-48 | -8.615850e-47 |
| Msa0541130 | Msa0564390 | 0.819161 | 1.342779e-52 | -8.615850e-47 |
| Msa0545210 | Msa0564390 | 0.837832 | 4.117747e-57 | -8.615850e-47 |
| Msa0562030 | Msa0564390 | 0.820840 | 5.545985e-53 | -8.615850e-47 |
| Msa0562570 | Msa0564390 | 0.820974 | 5.164823e-53 | -8.615850e-47 |
| Msa0562590 | Msa0564390 | 0.821687 | 3.536385e-53 | -8.615850e-47 |
| Msa0563560 | Msa0564390 | 0.856906 | 2.342630e-62 | -8.615850e-47 |
| Msa0563730 | Msa0564390 | 0.823889 | 1.085929e-53 | -8.615850e-47 |
| Msa0564390 | Msa0569200 | 0.819917 | 9.027068e-53 | -8.615850e-47 |
| Msa0564390 | Msa0569500 | 0.802272 | 6.070850e-49 | -8.615850e-47 |
| Msa0564390 | Msa0570760 | 0.803394 | 3.560391e-49 | -8.615850e-47 |
| Msa0564390 | Msa0585560 | 0.804544 | 2.053359e-49 | -8.615850e-47 |
| Msa0564390 | Msa0602390 | 0.801897 | 7.247182e-49 | -8.615850e-47 |
| Msa0564390 | Msa0610430 | 0.803549 | 3.306662e-49 | -8.615850e-47 |
| Msa0564390 | Msa0610840 | -0.802059 | 6.714889e-49 | -8.615850e-47 |
| Msa0564390 | Msa0616160 | 0.824938 | 6.153679e-54 | -8.615850e-47 |
| Msa0564390 | Msa0626360 | 0.806240 | 9.053928e-50 | -8.615850e-47 |
| Msa0564390 | Msa0649490 | 0.817986 | 2.480858e-52 | -8.615850e-47 |
| Msa0564390 | Msa0661650 | 0.814040 | 1.886663e-51 | -8.615850e-47 |
| Msa0564390 | Msa0663390 | 0.809147 | 2.184619e-50 | -8.615850e-47 |
| Msa0564390 | Msa0663810 | 0.850852 | 1.298511e-60 | -8.615850e-47 |
| Msa0564390 | Msa0673460 | 0.830900 | 2.263577e-55 | -8.615850e-47 |
| Msa0564390 | Msa0677410 | 0.805869 | 1.084078e-49 | -8.615850e-47 |
| Msa0564390 | Msa0681250 | 0.832587 | 8.683739e-56 | -8.615850e-47 |
| Msa0564390 | Msa0681270 | 0.837903 | 3.949450e-57 | -8.615850e-47 |
| Msa0564390 | Msa0697030 | 0.829953 | 3.857594e-55 | -8.615850e-47 |
| Msa0564390 | Msa0697060 | 0.826956 | 2.040869e-54 | -8.615850e-47 |
| Msa0564390 | Msa0715700 | 0.800673 | 1.290885e-48 | -8.615850e-47 |
| Msa0564390 | Msa0731940 | 0.805858 | 1.089380e-49 | -8.615850e-47 |
| Msa0564390 | Msa0735170 | 0.803156 | 3.988374e-49 | -8.615850e-47 |
| Msa0564390 | Msa0741840 | 0.829615 | 4.661847e-55 | -8.615850e-47 |
| Msa0564390 | Msa0760130 | 0.805030 | 1.625104e-49 | -8.615850e-47 |
| Msa0564390 | Msa0766630 | 0.810362 | 1.196808e-50 | -8.615850e-47 |
| Msa0564390 | Msa0773540 | 0.820013 | 8.582696e-53 | -8.615850e-47 |
| Msa0564390 | Msa0802830 | 0.822780 | 1.971950e-53 | -8.615850e-47 |
| Msa0564390 | Msa0810220 | 0.806384 | 8.443972e-50 | -8.615850e-47 |
| Msa0564390 | Msa0820850 | 0.828429 | 9.034648e-55 | -8.615850e-47 |
| Msa0564390 | Msa0832340 | 0.826279 | 2.959707e-54 | -8.615850e-47 |
| Msa0564390 | Msa0849030 | 0.801427 | 9.049820e-49 | -8.615850e-47 |
| Msa0564390 | Msa0858130 | 0.804494 | 2.102365e-49 | -8.615850e-47 |
| Msa0564390 | Msa0861130 | 0.825880 | 3.681588e-54 | -8.615850e-47 |
| Msa0564390 | Msa0871270 | 0.819768 | 9.764269e-53 | -8.615850e-47 |
| Msa0564390 | Msa0899980 | 0.808484 | 3.027264e-50 | -8.615850e-47 |
| Msa0564390 | Msa0901500 | 0.802165 | 6.384889e-49 | -8.615850e-47 |
| Msa0564390 | Msa0927290 | 0.809632 | 1.719090e-50 | -8.615850e-47 |
| Msa0564390 | Msa0938220 | 0.811462 | 6.917626e-51 | -8.615850e-47 |
| Msa0564390 | Msa0947660 | 0.803388 | 3.570262e-49 | -8.615850e-47 |
| Msa0564390 | Msa0964310 | 0.809656 | 1.698809e-50 | -8.615850e-47 |
| Msa0564390 | Msa0966750 | 0.806896 | 6.585078e-50 | -8.615850e-47 |
| Msa0564390 | Msa0974070 | 0.813889 | 2.037035e-51 | -8.615850e-47 |
| Msa0564390 | Msa0999870 | 0.818822 | 1.603802e-52 | -8.615850e-47 |
| Msa0564390 | Msa1002000 | 0.832390 | 9.713708e-56 | -8.615850e-47 |
| Msa0564390 | Msa1002850 | 0.818454 | 1.943489e-52 | -8.615850e-47 |
| Msa0564390 | Msa1014540 | 0.835936 | 1.255182e-56 | -8.615850e-47 |
| Msa0564390 | Msa1023950 | 0.800995 | 1.109330e-48 | -8.615850e-47 |
| Msa0564390 | Msa1035480 | 0.815011 | 1.150194e-51 | -8.615850e-47 |
| Msa0564390 | Msa1075540 | 0.834413 | 3.041528e-56 | -8.615850e-47 |
| Msa0564390 | Msa1075650 | 0.839536 | 1.493979e-57 | -8.615850e-47 |
| Msa0564390 | Msa1081980 | 0.818507 | 1.890595e-52 | -8.615850e-47 |
| Msa0564390 | Msa1082500 | 0.810717 | 1.003450e-50 | -8.615850e-47 |
| Msa0564390 | Msa1083840 | 0.802557 | 5.300878e-49 | -8.615850e-47 |
| Msa0564390 | Msa1100050 | 0.805705 | 1.173427e-49 | -8.615850e-47 |
| Msa0564390 | Msa1101090 | 0.802686 | 4.987117e-49 | -8.615850e-47 |
| Msa0564390 | Msa1104090 | 0.805402 | 1.358505e-49 | -8.615850e-47 |
| Msa0564390 | Msa1109680 | 0.814819 | 1.268569e-51 | -8.615850e-47 |
| Msa0564390 | Msa1121480 | 0.800286 | 1.547392e-48 | -8.615850e-47 |
| Msa0564390 | Msa1121490 | 0.822813 | 1.937834e-53 | -8.615850e-47 |
| Msa0564390 | Msa1124020 | 0.812211 | 4.752446e-51 | -8.615850e-47 |
| Msa0564390 | Msa1124960 | 0.803321 | 3.686627e-49 | -8.615850e-47 |
| Msa0564390 | Msa1135470 | 0.812661 | 3.789655e-51 | -8.615850e-47 |
| Msa0564390 | Msa1137570 | 0.805076 | 1.589583e-49 | -8.615850e-47 |
| Msa0564390 | Msa1162780 | 0.833771 | 4.404817e-56 | -8.615850e-47 |
| Msa0564390 | Msa1163090 | 0.822447 | 2.357680e-53 | -8.615850e-47 |
| Msa0564390 | Msa1163820 | 0.832917 | 7.190804e-56 | -8.615850e-47 |
| Msa0564390 | Msa1172400 | 0.804697 | 1.907232e-49 | -8.615850e-47 |
| Msa0564390 | Msa1174040 | 0.817899 | 2.595657e-52 | -8.615850e-47 |
| Msa0564390 | Msa1179770 | 0.802179 | 6.342793e-49 | -8.615850e-47 |
| Msa0564390 | Msa1181910 | 0.819359 | 1.210816e-52 | -8.615850e-47 |
| Msa0564390 | Msa1186640 | 0.802352 | 5.842879e-49 | -8.615850e-47 |
| Msa0564390 | Msa1188710 | 0.803114 | 4.067996e-49 | -8.615850e-47 |
| Msa0564390 | Msa1192000 | 0.813139 | 2.977092e-51 | -8.615850e-47 |
| Msa0564390 | Msa1192990 | 0.805784 | 1.129115e-49 | -8.615850e-47 |
| Msa0564390 | Msa1193290 | 0.802298 | 5.996055e-49 | -8.615850e-47 |
| Msa0564390 | Msa1221050 | 0.813883 | 2.042571e-51 | -8.615850e-47 |
| Msa0564390 | Msa1228590 | 0.827777 | 1.296746e-54 | -8.615850e-47 |
| Msa0564390 | Msa1246510 | 0.804259 | 2.354113e-49 | -8.615850e-47 |
| Msa0564390 | Msa1277660 | 0.810401 | 1.174093e-50 | -8.615850e-47 |
| Msa0564390 | Msa1284680 | 0.838789 | 2.334065e-57 | -8.615850e-47 |
| Msa0564390 | Msa1313140 | 0.844257 | 8.455609e-59 | -8.615850e-47 |
| Msa0564390 | Msa1331320 | 0.800182 | 1.624855e-48 | -8.615850e-47 |
| Msa0564390 | Msa1348890 | 0.811205 | 7.864375e-51 | -8.615850e-47 |
| Msa0564390 | Msa1353460 | 0.802489 | 5.475449e-49 | -8.615850e-47 |
| Msa0564390 | Msa1353470 | 0.831258 | 1.848609e-55 | -8.615850e-47 |
| Msa0564390 | Msa1353980 | 0.813851 | 2.076217e-51 | -8.615850e-47 |
| Msa0564390 | Msa1373030 | 0.821485 | 3.937150e-53 | -8.615850e-47 |
| Msa0564390 | Msa1388970 | 0.811879 | 5.614758e-51 | -8.615850e-47 |
| Msa0564390 | Msa1392780 | 0.805288 | 1.434972e-49 | -8.615850e-47 |
| Msa0564390 | Msa1423870 | 0.841741 | 3.952283e-58 | -8.615850e-47 |
| Msa0564390 | Msa1425260 | 0.805743 | 1.152163e-49 | -8.615850e-47 |
| Msa0564390 | Msa1430690 | 0.800073 | 1.710396e-48 | -8.615850e-47 |
| Msa0564390 | Msa1436480 | 0.811894 | 5.572162e-51 | -8.615850e-47 |
| Msa0564390 | Msa1463900 | 0.808298 | 3.317394e-50 | -8.615850e-47 |
| Msa0564390 | Msa1464810 | 0.800219 | 1.597292e-48 | -8.615850e-47 |
| Msa0564390 | Msa1466540 | 0.821415 | 4.086961e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0564390 | MtrunA17_Chr8g0378341 | 98.039 | 408 | 8 | 0 | 1 | 408 | 1 | 408 | 0.0 | 801 |
| Msa0564390 | MtrunA17_Chr8g0339951 | 57.843 | 306 | 126 | 2 | 104 | 408 | 1 | 304 | 3.92e-117 | 343 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0564390 | AT1G04850.1 | 76.998 | 413 | 90 | 3 | 1 | 408 | 1 | 413 | 0.0 | 560 |
| Msa0564390 | AT1G04850.2 | 75.949 | 316 | 73 | 2 | 96 | 408 | 9 | 324 | 4.85e-140 | 402 |
| Msa0564390 | AT5G48690.1 | 53.746 | 307 | 135 | 5 | 108 | 408 | 11 | 316 | 6.30e-87 | 267 |
| Msa0564390 | AT5G48690.2 | 53.171 | 205 | 90 | 4 | 209 | 408 | 63 | 266 | 9.32e-60 | 196 |
| Msa0564390 | AT5G48690.3 | 54.808 | 208 | 88 | 4 | 108 | 310 | 11 | 217 | 1.28e-47 | 162 |
Find 113 sgRNAs with CRISPR-Local
Find 473 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAATAGCATTTGTTTCTTC+TGG | 0.094394 | 4_1:-65056060 | None:intergenic |
| ACTTATTCCCTGAAATATTT+TGG | 0.107389 | 4_1:-65060789 | None:intergenic |
| TTGATTCAGTTGTAACTTAA+AGG | 0.145629 | 4_1:+65060585 | Msa0564390:three_prime_UTR |
| TTAGGAGCCTCTAAACTTAT+TGG | 0.215963 | 4_1:-65054619 | None:intergenic |
| GTGTATATCCAAAATATTTC+AGG | 0.248827 | 4_1:+65060781 | Msa0564390:three_prime_UTR |
| GTTCAGATCCAGCTGAATTT+AGG | 0.250912 | 4_1:-65060521 | None:intergenic |
| TTCAGTGGATTCAGAGAAAT+TGG | 0.259726 | 4_1:-65054347 | None:intergenic |
| TTCAGTGTGCCCAGTTCTTT+TGG | 0.262566 | 4_1:-65054566 | None:intergenic |
| CCACATAGGTTAGAAGAGTT+TGG | 0.278922 | 4_1:-65059719 | None:intergenic |
| TGCAGAGTTTCCTGCCAATT+AGG | 0.314647 | 4_1:+65057970 | Msa0564390:intron |
| AGCTGTTGTAGAGGAGAAAA+AGG | 0.333186 | 4_1:+65057876 | Msa0564390:CDS |
| GATCAATGGTTCCACCCTCT+TGG | 0.347055 | 4_1:-65054657 | None:intergenic |
| CGAAACGAATCACCGGAATA+TGG | 0.349302 | 4_1:+65054237 | Msa0564390:exon |
| ATCAATGGTTCCACCCTCTT+GGG | 0.353081 | 4_1:-65054656 | None:intergenic |
| TTGGCTGTTGAAGGCTCCTC+TGG | 0.354926 | 4_1:-65057847 | None:intergenic |
| AGCGAAGCCAATAAGTTTAG+AGG | 0.369182 | 4_1:+65054612 | Msa0564390:CDS |
| CTCTACAACAGCTGAAGGTT+TGG | 0.374843 | 4_1:-65057866 | None:intergenic |
| GGTGGATCCAATTGGTATAT+TGG | 0.380323 | 4_1:-65054212 | None:intergenic |
| TTGAATTCCTTGAAATTTGC+GGG | 0.388129 | 4_1:+65060436 | Msa0564390:CDS |
| TCTCAAACCCGCAAATTTCA+AGG | 0.390275 | 4_1:-65060443 | None:intergenic |
| GAATAGCATTTGTTTCTTCT+GGG | 0.392328 | 4_1:-65056059 | None:intergenic |
| GCGAAACCCCTGCCATATTC+CGG | 0.397441 | 4_1:-65054249 | None:intergenic |
| GCTGAAGGTTTGGCTGTTGA+AGG | 0.400858 | 4_1:-65057856 | None:intergenic |
| TGGGATTCTGAATTCCCCTT+AGG | 0.406936 | 4_1:-65054637 | None:intergenic |
| GCCTCGAGGCTGCTGTAACT+TGG | 0.413530 | 4_1:+65055696 | Msa0564390:CDS |
| GTTTCGTCGGTGGATCCAAT+TGG | 0.417788 | 4_1:-65054220 | None:intergenic |
| ACTTATTGGCTTCGCTGCTT+CGG | 0.419074 | 4_1:-65054605 | None:intergenic |
| GATTTACACACCAAAAGAAC+TGG | 0.421844 | 4_1:+65054556 | Msa0564390:CDS |
| ATCACCTTCATTCTGATCAA+TGG | 0.432487 | 4_1:-65054671 | None:intergenic |
| GCTTGAGGAACTTGAATCAA+TGG | 0.436658 | 4_1:+65055021 | Msa0564390:CDS |
| GGTGTAGGTAAGGGTGAGAA+GGG | 0.454330 | 4_1:-65054151 | None:intergenic |
| CTTGAGGAACTTGAATCAAT+GGG | 0.458924 | 4_1:+65055022 | Msa0564390:CDS |
| TTTGAGAAAAGCAGAGAAAG+AGG | 0.463433 | 4_1:+65057584 | Msa0564390:CDS |
| ATGAAATGTCTATATACTCT+TGG | 0.463502 | 4_1:-65060817 | None:intergenic |
| TGGCTTTATAGGTGTAGGTA+AGG | 0.464185 | 4_1:-65054161 | None:intergenic |
| AGAAGAAGAAGAGAAGAGAA+TGG | 0.464524 | 4_1:+65056712 | Msa0564390:CDS |
| ATTGAATTCCTTGAAATTTG+CGG | 0.466357 | 4_1:+65060435 | Msa0564390:CDS |
| TTGTGGCAGGCCTAATTGGC+AGG | 0.466592 | 4_1:-65057980 | None:intergenic |
| ATGCTATTCTAAAGGAACTA+AGG | 0.466756 | 4_1:+65056073 | Msa0564390:CDS |
| TTGCGGTACTCTCTTGAAAT+CGG | 0.467068 | 4_1:+65054285 | Msa0564390:CDS |
| AGGTGTAGGTAAGGGTGAGA+AGG | 0.474369 | 4_1:-65054152 | None:intergenic |
| CCGGTGATTCGTTTCGTCGG+TGG | 0.485837 | 4_1:-65054230 | None:intergenic |
| AAGAAGACAACGAGAGAAAA+CGG | 0.494209 | 4_1:+65057471 | Msa0564390:CDS |
| GTTTCTTCTGGGGTAAGAGA+GGG | 0.502835 | 4_1:-65056048 | None:intergenic |
| AATAAGTTTAGAGGCTCCTA+AGG | 0.503210 | 4_1:+65054621 | Msa0564390:CDS |
| ACGAATCACCGGAATATGGC+AGG | 0.506192 | 4_1:+65054241 | Msa0564390:exon |
| GCGGAAAGAAGACGAAAACT+TGG | 0.508359 | 4_1:+65057817 | Msa0564390:CDS |
| AATGGAGAGAGAAAGAGAAA+AGG | 0.510480 | 4_1:+65056730 | Msa0564390:CDS |
| GGAGAGAATTCGAGTCGGTA+AGG | 0.511409 | 4_1:+65057424 | Msa0564390:intron |
| CAAACTCTTCTAACCTATGT+GGG | 0.512936 | 4_1:+65059720 | Msa0564390:CDS |
| GAACCGGATCTATGTGGGAT+TGG | 0.514694 | 4_1:+65054123 | Msa0564390:five_prime_UTR |
| TTCTCCTCTACAACAGCTGA+AGG | 0.518911 | 4_1:-65057871 | None:intergenic |
| AGAAACAAATGCTATTCTAA+AGG | 0.519291 | 4_1:+65056065 | Msa0564390:CDS |
| AGCTATAATCTTAAGGGAGA+AGG | 0.520095 | 4_1:+65056676 | Msa0564390:intron |
| GAAAGAGTTGGTGCTTTGAA+AGG | 0.523288 | 4_1:+65060408 | Msa0564390:CDS |
| AAGGGCATTTCATCTATGTC+AGG | 0.523907 | 4_1:-65055740 | None:intergenic |
| TTAAAATCCAGCATTAGAAC+CGG | 0.527711 | 4_1:+65054107 | None:intergenic |
| ATTGCAGTCCTAAATTCAGC+TGG | 0.528514 | 4_1:+65060513 | Msa0564390:CDS |
| TGTATATCCAAAATATTTCA+GGG | 0.529678 | 4_1:+65060782 | Msa0564390:three_prime_UTR |
| TTGGAATGCTCTCTTCACTC+TGG | 0.530560 | 4_1:-65059700 | None:intergenic |
| TGTTTCTTCTGGGGTAAGAG+AGG | 0.531092 | 4_1:-65056049 | None:intergenic |
| AATGAAGTGCCCTTGTTGCA+CGG | 0.531495 | 4_1:-65055057 | None:intergenic |
| ATGAAGTGCCCTTGTTGCAC+GGG | 0.533869 | 4_1:-65055056 | None:intergenic |
| AAGAAGACGAAAACTTGGAT+TGG | 0.539216 | 4_1:+65057822 | Msa0564390:CDS |
| TTTCAACAGCCCGTGCAACA+AGG | 0.539956 | 4_1:+65055047 | Msa0564390:CDS |
| CCAAACTCTTCTAACCTATG+TGG | 0.543989 | 4_1:+65059719 | Msa0564390:CDS |
| TCTGGCAACATTCCCCACAT+AGG | 0.547001 | 4_1:-65059733 | None:intergenic |
| GAGCAGACGAGGTTGAGAAC+GGG | 0.547682 | 4_1:-65054370 | None:intergenic |
| AATAGCATTTGTTTCTTCTG+GGG | 0.552644 | 4_1:-65056058 | None:intergenic |
| CGACCAATCCCACATAGATC+CGG | 0.556912 | 4_1:-65054126 | None:intergenic |
| TGCGGGTTTGAGAAGATCGA+TGG | 0.557070 | 4_1:+65060453 | Msa0564390:CDS |
| TTCTATGGCTTTATAGGTGT+AGG | 0.562038 | 4_1:-65054166 | None:intergenic |
| TCGCTCCAGTGCGGTGATTG+CGG | 0.565094 | 4_1:+65054268 | Msa0564390:CDS |
| CAGAGAAAGAGGAAGAGCGA+AGG | 0.574752 | 4_1:+65057595 | Msa0564390:CDS |
| TGACATAGATGAAATGCCCT+TGG | 0.574903 | 4_1:+65055742 | Msa0564390:CDS |
| ATTCCGGTGATTCGTTTCGT+CGG | 0.576659 | 4_1:-65054233 | None:intergenic |
| CAAGCACTCCCTCATCTGCT+CGG | 0.577094 | 4_1:-65058006 | None:intergenic |
| CAAACCTTCAGCTGTTGTAG+AGG | 0.577181 | 4_1:+65057867 | Msa0564390:CDS |
| CTATGTCAGGCGTATTCTCG+TGG | 0.577322 | 4_1:-65055727 | None:intergenic |
| GAGGTTGAGAACGGGTTCAG+TGG | 0.580165 | 4_1:-65054362 | None:intergenic |
| GGAACCATTGATCAGAATGA+AGG | 0.580202 | 4_1:+65054667 | Msa0564390:CDS |
| AGAGTTGGTGCTTTGAAAGG+AGG | 0.583659 | 4_1:+65060411 | Msa0564390:CDS |
| GGAGCAGACGAGGTTGAGAA+CGG | 0.583672 | 4_1:-65054371 | None:intergenic |
| GAGTACCGCAATCACCGCAC+TGG | 0.585883 | 4_1:-65054273 | None:intergenic |
| AGAGAAAGAGGAAGAGCGAA+GGG | 0.587718 | 4_1:+65057596 | Msa0564390:CDS |
| GCATTAGAACCGGATCTATG+TGG | 0.588243 | 4_1:+65054117 | None:intergenic |
| AGGAGTTGCTTGAAGCAAAG+AGG | 0.588418 | 4_1:+65057444 | Msa0564390:CDS |
| TCGGCAAGGTTTGGAGCAAG+TGG | 0.589086 | 4_1:-65054392 | None:intergenic |
| ATAAGTTTAGAGGCTCCTAA+GGG | 0.591696 | 4_1:+65054622 | Msa0564390:CDS |
| TGGAGCAAGTGGAGCAGACG+AGG | 0.599392 | 4_1:-65054381 | None:intergenic |
| AGTTTAAGCAAAACATTGAG+AGG | 0.603119 | 4_1:+65060759 | Msa0564390:three_prime_UTR |
| GAATCACCGGAATATGGCAG+GGG | 0.604375 | 4_1:+65054243 | Msa0564390:exon |
| CATTAGAACCGGATCTATGT+GGG | 0.606889 | 4_1:+65054118 | None:intergenic |
| CGAATCACCGGAATATGGCA+GGG | 0.607477 | 4_1:+65054242 | Msa0564390:exon |
| CCACCGACGAAACGAATCAC+CGG | 0.609568 | 4_1:+65054230 | Msa0564390:five_prime_UTR |
| GGCTTTATAGGTGTAGGTAA+GGG | 0.613488 | 4_1:-65054160 | None:intergenic |
| TTCAACAGCCCGTGCAACAA+GGG | 0.616263 | 4_1:+65055048 | Msa0564390:CDS |
| AAAACTTGGATTGGCTCCAG+AGG | 0.621215 | 4_1:+65057831 | Msa0564390:CDS |
| TTCAGAGAAATTGGAGTGTG+AGG | 0.636378 | 4_1:-65054338 | None:intergenic |
| AATTCAGAATCCCAAGAGGG+TGG | 0.646932 | 4_1:+65054646 | Msa0564390:CDS |
| AGAAGCTTTAGCTTTACTGA+CGG | 0.652551 | 4_1:-65056022 | None:intergenic |
| TGTGTTTAACAGGAAAGAGT+TGG | 0.655885 | 4_1:+65060396 | Msa0564390:intron |
| AAACTCTTCTAACCTATGTG+GGG | 0.660327 | 4_1:+65059721 | Msa0564390:CDS |
| GGGAATTCAGAATCCCAAGA+GGG | 0.662097 | 4_1:+65054643 | Msa0564390:CDS |
| TTCTCTCAAGCAGAACCACA+AGG | 0.666147 | 4_1:+65058031 | Msa0564390:CDS |
| TATAGGTAACACTAGCCTCG+AGG | 0.680236 | 4_1:+65055682 | Msa0564390:intron |
| ATTTACACACCAAAAGAACT+GGG | 0.681737 | 4_1:+65054557 | Msa0564390:CDS |
| TAAGTTTAGAGGCTCCTAAG+GGG | 0.697901 | 4_1:+65054623 | Msa0564390:CDS |
| TCCAAGTTACAGCAGCCTCG+AGG | 0.700049 | 4_1:-65055697 | None:intergenic |
| GCAGGGGTTTCGCTCCAGTG+CGG | 0.706219 | 4_1:+65054259 | Msa0564390:CDS |
| ATTCAGGAGAGAATTCGAGT+CGG | 0.712094 | 4_1:+65057419 | Msa0564390:intron |
| GGGTTTGAGAAGATCGATGG+CGG | 0.728380 | 4_1:+65060456 | Msa0564390:CDS |
| GGGGAATTCAGAATCCCAAG+AGG | 0.732086 | 4_1:+65054642 | Msa0564390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTAAAAATAACATTGT+TGG | + | chr4_1:65055399-65055418 | Msa0564390:intron | 10.0% |
| !!! | CAATTTTATATTTACAATAT+TGG | + | chr4_1:65056826-65056845 | Msa0564390:intron | 10.0% |
| !!! | ATTTTATATTTACAATATTG+GGG | + | chr4_1:65056828-65056847 | Msa0564390:intron | 10.0% |
| !! | TTTCAAAATTTCAAATAAAT+AGG | - | chr4_1:65057942-65057961 | None:intergenic | 10.0% |
| !!! | ATGTTTTTTAAGATTTTTAT+GGG | + | chr4_1:65058375-65058394 | Msa0564390:intron | 10.0% |
| !! | AAAGAATAATTACTAAATTT+GGG | - | chr4_1:65058614-65058633 | None:intergenic | 10.0% |
| !! | AAAAGAATAATTACTAAATT+TGG | - | chr4_1:65058615-65058634 | None:intergenic | 10.0% |
| !! | AAGATAAAGAAAAAACTTAA+TGG | - | chr4_1:65054465-65054484 | None:intergenic | 15.0% |
| !! | TTGTTTCAAAATCTAAATTT+AGG | + | chr4_1:65054528-65054547 | Msa0564390:intron | 15.0% |
| !! | ACAAAACAATTATTCTTTAT+GGG | + | chr4_1:65055237-65055256 | Msa0564390:intron | 15.0% |
| !! | TATATTAATCTTATGTTTCA+TGG | - | chr4_1:65055322-65055341 | None:intergenic | 15.0% |
| !!! | TTTTTAAATTTTCATTCAAG+CGG | - | chr4_1:65055390-65055409 | None:intergenic | 15.0% |
| !!! | GAATATTTTTAACCATTTAT+TGG | + | chr4_1:65056190-65056209 | Msa0564390:intron | 15.0% |
| !!! | TTTTATATTTACAATATTGG+GGG | + | chr4_1:65056829-65056848 | Msa0564390:intron | 15.0% |
| !! | AAATTTCAAATAAATAGGTA+TGG | - | chr4_1:65057937-65057956 | None:intergenic | 15.0% |
| !! | AACATAAACTCAAATTATAA+TGG | + | chr4_1:65058141-65058160 | Msa0564390:intron | 15.0% |
| !!! | CATGTTTTTTAAGATTTTTA+TGG | + | chr4_1:65058374-65058393 | Msa0564390:intron | 15.0% |
| !! | AGATTGAAGAAATTAATTTA+TGG | + | chr4_1:65058800-65058819 | Msa0564390:intron | 15.0% |
| !! | ATAATCTATTGATCTTATAT+TGG | - | chr4_1:65059476-65059495 | None:intergenic | 15.0% |
| !!! | AAGAAATCTAAGTTTTTCTA+TGG | - | chr4_1:65054184-65054203 | None:intergenic | 20.0% |
| !!! | TATTTTACCAATATACCAAT+TGG | + | chr4_1:65054205-65054224 | Msa0564390:five_prime_UTR | 20.0% |
| !!! | GATAAAAAAAAATACGGTTT+TGG | - | chr4_1:65054419-65054438 | None:intergenic | 20.0% |
| !! | GGTTTGGATAAAAAAAAATA+CGG | - | chr4_1:65054425-65054444 | None:intergenic | 20.0% |
| !!! | TCGATTGATTATATTGTTTT+AGG | + | chr4_1:65054489-65054508 | Msa0564390:intron | 20.0% |
| !!! | CGATTGATTATATTGTTTTA+GGG | + | chr4_1:65054490-65054509 | Msa0564390:intron | 20.0% |
| !! | TGAATTAGATACAAAAACTA+AGG | - | chr4_1:65054933-65054952 | None:intergenic | 20.0% |
| !! | TAATTCATTCACTATTCAAT+TGG | + | chr4_1:65054946-65054965 | Msa0564390:intron | 20.0% |
| !! | AATCTTGTAAAATACAGAAA+TGG | + | chr4_1:65054973-65054992 | Msa0564390:intron | 20.0% |
| !! | GACAAAACAATTATTCTTTA+TGG | + | chr4_1:65055236-65055255 | Msa0564390:intron | 20.0% |
| !! | AACATTTCTGTTTATTCATA+CGG | + | chr4_1:65055768-65055787 | Msa0564390:intron | 20.0% |
| !! | TTTCACAAGTTGTATATATT+TGG | + | chr4_1:65055898-65055917 | Msa0564390:intron | 20.0% |
| !!! | TTCTTTATGAGATTTTGTAA+GGG | - | chr4_1:65056246-65056265 | None:intergenic | 20.0% |
| !!! | AATTATTTCTAAAGTAGCTT+AGG | + | chr4_1:65056291-65056310 | Msa0564390:intron | 20.0% |
| !!! | ATTATTTCTAAAGTAGCTTA+GGG | + | chr4_1:65056292-65056311 | Msa0564390:intron | 20.0% |
| !!! | TTTTTTGAGCTATAATCTTA+AGG | + | chr4_1:65056669-65056688 | Msa0564390:intron | 20.0% |
| !!! | TTTTTGAGCTATAATCTTAA+GGG | + | chr4_1:65056670-65056689 | Msa0564390:intron | 20.0% |
| !! | ATATAAAATTGTAAGATGCT+AGG | - | chr4_1:65056817-65056836 | None:intergenic | 20.0% |
| !! | GAACTAAAAAATTGTATTAG+AGG | - | chr4_1:65057130-65057149 | None:intergenic | 20.0% |
| !!! | TTAGATAGCATTTGAAATAA+AGG | - | chr4_1:65057220-65057239 | None:intergenic | 20.0% |
| !!! | ATATTTTTATAAAGCTGTGA+TGG | - | chr4_1:65057300-65057319 | None:intergenic | 20.0% |
| !!! | TTTTAATCGTCTAATTTAAC+AGG | + | chr4_1:65057668-65057687 | Msa0564390:intron | 20.0% |
| !! | ATTATAATGGTGAATAATGT+AGG | + | chr4_1:65058154-65058173 | Msa0564390:intron | 20.0% |
| !! | TTGATTACATAATGCAAAAA+AGG | + | chr4_1:65058192-65058211 | Msa0564390:intron | 20.0% |
| !!! | ACTAAATAACATAATTTGCA+GGG | - | chr4_1:65058228-65058247 | None:intergenic | 20.0% |
| !!! | TTCTAAAACCTTTCTATTAA+TGG | + | chr4_1:65058274-65058293 | Msa0564390:intron | 20.0% |
| !!! | AGGTGACATTTTTAATTTAT+TGG | - | chr4_1:65058338-65058357 | None:intergenic | 20.0% |
| !!! | CAATTTTGTATTAAATGCAT+TGG | - | chr4_1:65058660-65058679 | None:intergenic | 20.0% |
| !! | GTTTATTTCAGCTTATAAAA+TGG | - | chr4_1:65058876-65058895 | None:intergenic | 20.0% |
| !!! | CAATTTGATGTCATTTTATT+GGG | + | chr4_1:65059088-65059107 | Msa0564390:intron | 20.0% |
| !!! | AAGAAAAAGAAATTGCATTT+TGG | - | chr4_1:65059507-65059526 | None:intergenic | 20.0% |
| !! | CTGAAATTATGATTTATTTC+AGG | - | chr4_1:65059534-65059553 | None:intergenic | 20.0% |
| !!! | TTTCAGTTATTTTCATCTTA+AGG | + | chr4_1:65059548-65059567 | Msa0564390:intron | 20.0% |
| !!! | GATCTCTTCTTTTTTTTATA+TGG | - | chr4_1:65059915-65059934 | None:intergenic | 20.0% |
| !! | AAAAAAAAGAAGAGATCTTT+AGG | + | chr4_1:65059918-65059937 | Msa0564390:intron | 20.0% |
| !! | TGTATATCCAAAATATTTCA+GGG | + | chr4_1:65060782-65060801 | Msa0564390:three_prime_UTR | 20.0% |
| !!! | AAGTTTTTCTATGGCTTTAT+AGG | - | chr4_1:65054175-65054194 | None:intergenic | 25.0% |
| !!! | AAAAAAATACGGTTTTGGAT+CGG | - | chr4_1:65054414-65054433 | None:intergenic | 25.0% |
| !! | GAAAAAACTTAATGGATGAT+TGG | - | chr4_1:65054457-65054476 | None:intergenic | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+CGG | + | chr4_1:65054906-65054925 | Msa0564390:intron | 25.0% |
| ! | AAATCTAATAATCGGGAATT+CGG | - | chr4_1:65055202-65055221 | None:intergenic | 25.0% |
| ! | TCAAAGGAAATCTAATAATC+GGG | - | chr4_1:65055209-65055228 | None:intergenic | 25.0% |
| ! | CTCAAAGGAAATCTAATAAT+CGG | - | chr4_1:65055210-65055229 | None:intergenic | 25.0% |
| ! | GATTATTAGATTTCCTTTGA+GGG | + | chr4_1:65055209-65055228 | Msa0564390:intron | 25.0% |
| ! | ATAACATTGTTGGATTCTAT+TGG | + | chr4_1:65055409-65055428 | Msa0564390:intron | 25.0% |
| ! | TCATGTTAAGTTAAAGTATG+TGG | + | chr4_1:65055533-65055552 | Msa0564390:intron | 25.0% |
| ! | AAGCAGTTTATTTATTCACA+AGG | + | chr4_1:65055574-65055593 | Msa0564390:intron | 25.0% |
| ! | AACTTCAGTTAAAATAAGAG+TGG | + | chr4_1:65055923-65055942 | Msa0564390:intron | 25.0% |
| ! | AGAAACAAATGCTATTCTAA+AGG | + | chr4_1:65056065-65056084 | Msa0564390:CDS | 25.0% |
| ! | TAAAATAAGTTTCACGTTGT+GGG | + | chr4_1:65056110-65056129 | Msa0564390:intron | 25.0% |
| !! | TCTGAAACAACTTGATTATT+TGG | - | chr4_1:65056136-65056155 | None:intergenic | 25.0% |
| ! | ACATTACATCAACCAATAAA+TGG | - | chr4_1:65056205-65056224 | None:intergenic | 25.0% |
| !! | TTGGTTGATGTAATGTATTA+TGG | + | chr4_1:65056209-65056228 | Msa0564390:intron | 25.0% |
| ! | ATGTAATGTATTATGGCTAA+TGG | + | chr4_1:65056216-65056235 | Msa0564390:intron | 25.0% |
| !! | CTTCTTTATGAGATTTTGTA+AGG | - | chr4_1:65056247-65056266 | None:intergenic | 25.0% |
| ! | TAAAGAAGCAATTATTGTTG+AGG | + | chr4_1:65056259-65056278 | Msa0564390:intron | 25.0% |
| !! | TATGACCATATATTTTGTTG+TGG | + | chr4_1:65056469-65056488 | Msa0564390:intron | 25.0% |
| !!! | ATGACCATATATTTTGTTGT+GGG | + | chr4_1:65056470-65056489 | Msa0564390:intron | 25.0% |
| ! | ACAAACTAGTAACAATAACT+TGG | - | chr4_1:65056637-65056656 | None:intergenic | 25.0% |
| !! | ATTGTATTAGAGGATAGTTT+TGG | - | chr4_1:65057120-65057139 | None:intergenic | 25.0% |
| ! | ATACAAAATCTTCCTCATTT+GGG | - | chr4_1:65057154-65057173 | None:intergenic | 25.0% |
| ! | TTGAAATAAAGGACATTGAA+AGG | - | chr4_1:65057209-65057228 | None:intergenic | 25.0% |
| !! | TCATTGTTTTCTTCTTATTC+AGG | + | chr4_1:65057403-65057422 | Msa0564390:intron | 25.0% |
| !! | TGCAGTCAAATTTAAAACAT+AGG | - | chr4_1:65057521-65057540 | None:intergenic | 25.0% |
| ! | CTCAAGCATTCATAAAAAAT+TGG | - | chr4_1:65057702-65057721 | None:intergenic | 25.0% |
| !! | CTTTATTTCTCAATTATGAC+AGG | + | chr4_1:65057795-65057814 | Msa0564390:intron | 25.0% |
| ! | ATTATGTAATCAAGCTTCTA+TGG | - | chr4_1:65058185-65058204 | None:intergenic | 25.0% |
| !! | CTAAATAACATAATTTGCAG+GGG | - | chr4_1:65058227-65058246 | None:intergenic | 25.0% |
| !! | CACTAAATAACATAATTTGC+AGG | - | chr4_1:65058229-65058248 | None:intergenic | 25.0% |
| ! | AACATTAGTAATATGAGAAG+AGG | + | chr4_1:65058399-65058418 | Msa0564390:intron | 25.0% |
| ! | ACATTAGTAATATGAGAAGA+GGG | + | chr4_1:65058400-65058419 | Msa0564390:intron | 25.0% |
| ! | ATAGACAATAACATCCATAT+CGG | + | chr4_1:65058990-65059009 | Msa0564390:intron | 25.0% |
| ! | ATGACATGACTAATTATTGA+AGG | - | chr4_1:65059047-65059066 | None:intergenic | 25.0% |
| ! | CCAATAAAATGACATCAAAT+TGG | - | chr4_1:65059090-65059109 | None:intergenic | 25.0% |
| !!! | CCAATTTGATGTCATTTTAT+TGG | + | chr4_1:65059087-65059106 | Msa0564390:intron | 25.0% |
| ! | GTCTTATCTTCATTATATGT+GGG | - | chr4_1:65059126-65059145 | None:intergenic | 25.0% |
| ! | CTAACTAATCTTTACAAAAC+CGG | - | chr4_1:65059163-65059182 | None:intergenic | 25.0% |
| !! | CCATATTAGGTTTTCATATT+GGG | - | chr4_1:65059187-65059206 | None:intergenic | 25.0% |
| !! | ACCATATTAGGTTTTCATAT+TGG | - | chr4_1:65059188-65059207 | None:intergenic | 25.0% |
| ! | TGAGAACTTAATACATTTGA+AGG | + | chr4_1:65059384-65059403 | Msa0564390:intron | 25.0% |
| !! | TGCAAAGGTGTAAAATATTT+AGG | - | chr4_1:65059639-65059658 | None:intergenic | 25.0% |
| !!! | TTACGTGTTTGTTTTATTCT+TGG | + | chr4_1:65059662-65059681 | Msa0564390:intron | 25.0% |
| !! | ACAATAATTTGATGACTCAA+AGG | - | chr4_1:65060140-65060159 | None:intergenic | 25.0% |
| ! | ATCAAATTATTGTTGAGCAT+AGG | + | chr4_1:65060147-65060166 | Msa0564390:intron | 25.0% |
| ! | ATTGAATTCCTTGAAATTTG+CGG | + | chr4_1:65060435-65060454 | Msa0564390:CDS | 25.0% |
| ! | AACTAAAGAACTCCAAAAAA+GGG | - | chr4_1:65060567-65060586 | None:intergenic | 25.0% |
| ! | TTGATTCAGTTGTAACTTAA+AGG | + | chr4_1:65060585-65060604 | Msa0564390:three_prime_UTR | 25.0% |
| !!! | TGTTATTTTTCATAGCTTGA+AGG | + | chr4_1:65060663-65060682 | Msa0564390:three_prime_UTR | 25.0% |
| !!! | GTTATTTTTCATAGCTTGAA+GGG | + | chr4_1:65060664-65060683 | Msa0564390:three_prime_UTR | 25.0% |
| !!! | TTTAAGCTGTTTTTAAGCTT+GGG | + | chr4_1:65060725-65060744 | Msa0564390:three_prime_UTR | 25.0% |
| ! | GTGTATATCCAAAATATTTC+AGG | + | chr4_1:65060781-65060800 | Msa0564390:three_prime_UTR | 25.0% |
| !! | ACTTATTCCCTGAAATATTT+TGG | - | chr4_1:65060792-65060811 | None:intergenic | 25.0% |
| ! | ATGAAATGTCTATATACTCT+TGG | - | chr4_1:65060820-65060839 | None:intergenic | 25.0% |
| ! | AAACTTAATGGATGATTGGA+AGG | - | chr4_1:65054453-65054472 | None:intergenic | 30.0% |
| ATTTACACACCAAAAGAACT+GGG | + | chr4_1:65054557-65054576 | Msa0564390:CDS | 30.0% | |
| GGATCACAACTAAAGTTAAT+TGG | - | chr4_1:65054714-65054733 | None:intergenic | 30.0% | |
| TTTAGTTGTGATCCTTATCT+AGG | + | chr4_1:65054720-65054739 | Msa0564390:intron | 30.0% | |
| TTAGTTGTGATCCTTATCTA+GGG | + | chr4_1:65054721-65054740 | Msa0564390:intron | 30.0% | |
| TCAAATAACTCAATCCAAAC+AGG | - | chr4_1:65054747-65054766 | None:intergenic | 30.0% | |
| ATAAGTTGTTTATCCAAACC+GGG | + | chr4_1:65054907-65054926 | Msa0564390:intron | 30.0% | |
| CGATTATTAGATTTCCTTTG+AGG | + | chr4_1:65055208-65055227 | Msa0564390:intron | 30.0% | |
| ! | ATTGTTGGATTCTATTGGTT+TGG | + | chr4_1:65055414-65055433 | Msa0564390:intron | 30.0% |
| !! | TTGTTGGATTCTATTGGTTT+GGG | + | chr4_1:65055415-65055434 | Msa0564390:intron | 30.0% |
| AAGTTAAAGTATGTGGATCT+AGG | + | chr4_1:65055540-65055559 | Msa0564390:intron | 30.0% | |
| AGTTCAGTATCTAGAGAATA+TGG | - | chr4_1:65055647-65055666 | None:intergenic | 30.0% | |
| ATTCTCTAGATACTGAACTT+AGG | + | chr4_1:65055648-65055667 | Msa0564390:intron | 30.0% | |
| AAACAGAAATGTTGTACCAA+GGG | - | chr4_1:65055761-65055780 | None:intergenic | 30.0% | |
| TAAACAGAAATGTTGTACCA+AGG | - | chr4_1:65055762-65055781 | None:intergenic | 30.0% | |
| ! | AATAGCATTTGTTTCTTCTG+GGG | - | chr4_1:65056061-65056080 | None:intergenic | 30.0% |
| ! | GAATAGCATTTGTTTCTTCT+GGG | - | chr4_1:65056062-65056081 | None:intergenic | 30.0% |
| ! | AGAATAGCATTTGTTTCTTC+TGG | - | chr4_1:65056063-65056082 | None:intergenic | 30.0% |
| ! | ATGCTATTCTAAAGGAACTA+AGG | + | chr4_1:65056073-65056092 | Msa0564390:CDS | 30.0% |
| GTAAAATAAGTTTCACGTTG+TGG | + | chr4_1:65056109-65056128 | Msa0564390:intron | 30.0% | |
| AGTTTGATTGAATTCTGTTG+TGG | + | chr4_1:65056155-65056174 | Msa0564390:intron | 30.0% | |
| !!! | ATGTATCACACCTTGTTTTA+TGG | + | chr4_1:65056345-65056364 | Msa0564390:intron | 30.0% |
| CTGATCCTGTTGTATATTAA+GGG | - | chr4_1:65056436-65056455 | None:intergenic | 30.0% | |
| ACTGATCCTGTTGTATATTA+AGG | - | chr4_1:65056437-65056456 | None:intergenic | 30.0% | |
| TCTACCCACAACAAAATATA+TGG | - | chr4_1:65056477-65056496 | None:intergenic | 30.0% | |
| !! | TATATTTTGTTGTGGGTAGA+AGG | + | chr4_1:65056477-65056496 | Msa0564390:intron | 30.0% |
| !! | ATATTTTGTTGTGGGTAGAA+GGG | + | chr4_1:65056478-65056497 | Msa0564390:intron | 30.0% |
| GTGAAAAATATAGGGGAAAA+TGG | + | chr4_1:65056965-65056984 | Msa0564390:intron | 30.0% | |
| !!! | TATTAGAGGATAGTTTTGGA+GGG | - | chr4_1:65057116-65057135 | None:intergenic | 30.0% |
| !!! | TTTTTTAGTTCTCCCAAATG+AGG | + | chr4_1:65057139-65057158 | Msa0564390:intron | 30.0% |
| GATACAAAATCTTCCTCATT+TGG | - | chr4_1:65057155-65057174 | None:intergenic | 30.0% | |
| AGAGAGAATCAAGCAAAAAT+TGG | + | chr4_1:65057623-65057642 | Msa0564390:CDS | 30.0% | |
| GAGCAATTTCTTTAACAAGA+TGG | + | chr4_1:65057728-65057747 | Msa0564390:intron | 30.0% | |
| AACAAATTGACAACTGTCAT+TGG | + | chr4_1:65057754-65057773 | Msa0564390:intron | 30.0% | |
| ACAAATTGACAACTGTCATT+GGG | + | chr4_1:65057755-65057774 | Msa0564390:intron | 30.0% | |
| TATTTCTCAATTATGACAGG+CGG | + | chr4_1:65057798-65057817 | Msa0564390:intron | 30.0% | |
| ATAAAAAACACCACCATTTC+TGG | - | chr4_1:65057913-65057932 | None:intergenic | 30.0% | |
| GAAAATGTAAATGTACCTTG+TGG | - | chr4_1:65058049-65058068 | None:intergenic | 30.0% | |
| ! | AGGTACATTTACATTTTCAC+TGG | + | chr4_1:65058051-65058070 | Msa0564390:intron | 30.0% |
| CATGAAACGAAGTAAAAACA+AGG | - | chr4_1:65058358-65058377 | None:intergenic | 30.0% | |
| !! | AAAAGTATTACATGAAGCTG+TGG | - | chr4_1:65058494-65058513 | None:intergenic | 30.0% |
| ! | GAAAGATGAATAAAAGCATG+TGG | + | chr4_1:65058523-65058542 | Msa0564390:intron | 30.0% |
| ! | AATTAATTTATGGATTGCCG+TGG | + | chr4_1:65058810-65058829 | Msa0564390:intron | 30.0% |
| CAATGTGTGATAAAAAACCA+CGG | - | chr4_1:65058830-65058849 | None:intergenic | 30.0% | |
| ATTTCATGTTCCTATCCAAA+TGG | - | chr4_1:65059020-65059039 | None:intergenic | 30.0% | |
| ! | TCAAATTGGTTTCGTAAATG+AGG | - | chr4_1:65059076-65059095 | None:intergenic | 30.0% |
| ! | GGTCTTATCTTCATTATATG+TGG | - | chr4_1:65059127-65059146 | None:intergenic | 30.0% |
| CCCAATATGAAAACCTAATA+TGG | + | chr4_1:65059184-65059203 | Msa0564390:intron | 30.0% | |
| ACTCTTTGTAAACTCATTTC+AGG | - | chr4_1:65059314-65059333 | None:intergenic | 30.0% | |
| ACAAACACGTAAATTTGCAA+AGG | - | chr4_1:65059654-65059673 | None:intergenic | 30.0% | |
| GTAAGAAAATCCGTTAAGAT+GGG | + | chr4_1:65059810-65059829 | Msa0564390:intron | 30.0% | |
| TAAGAAAATCCGTTAAGATG+GGG | + | chr4_1:65059811-65059830 | Msa0564390:intron | 30.0% | |
| !!! | AACTACTTTTTATCTTCCCT+AGG | - | chr4_1:65059884-65059903 | None:intergenic | 30.0% |
| !! | CCAAATTTCAGAGTTTTGAT+CGG | - | chr4_1:65060091-65060110 | None:intergenic | 30.0% |
| !! | CGATCAAAACTCTGAAATTT+GGG | + | chr4_1:65060089-65060108 | Msa0564390:intron | 30.0% |
| CACCTGATGGTATAATATTT+GGG | - | chr4_1:65060198-65060217 | None:intergenic | 30.0% | |
| ACACCTGATGGTATAATATT+TGG | - | chr4_1:65060199-65060218 | None:intergenic | 30.0% | |
| GTATATATGCTGTGTTTAAC+AGG | + | chr4_1:65060386-65060405 | Msa0564390:intron | 30.0% | |
| TTGAATTCCTTGAAATTTGC+GGG | + | chr4_1:65060436-65060455 | Msa0564390:CDS | 30.0% | |
| !!! | TGAAGTTTTGTTTTTGGCTA+GGG | + | chr4_1:65060479-65060498 | Msa0564390:CDS | 30.0% |
| !!! | GCAATAAAGAATCCCTTTTT+TGG | + | chr4_1:65060552-65060571 | Msa0564390:CDS | 30.0% |
| CAACTAAAGAACTCCAAAAA+AGG | - | chr4_1:65060568-65060587 | None:intergenic | 30.0% | |
| !!! | AAGGCTTGACAATTTTAGTT+TGG | + | chr4_1:65060604-65060623 | Msa0564390:three_prime_UTR | 30.0% |
| ! | TCATGTGTCTTAACTTTTTG+CGG | + | chr4_1:65060702-65060721 | Msa0564390:three_prime_UTR | 30.0% |
| !!! | GTTTAAGCTGTTTTTAAGCT+TGG | + | chr4_1:65060724-65060743 | Msa0564390:three_prime_UTR | 30.0% |
| AGTTTAAGCAAAACATTGAG+AGG | + | chr4_1:65060759-65060778 | Msa0564390:three_prime_UTR | 30.0% | |
| !! | TTCTATGGCTTTATAGGTGT+AGG | - | chr4_1:65054169-65054188 | None:intergenic | 35.0% |
| ! | TTCAGTGGATTCAGAGAAAT+TGG | - | chr4_1:65054350-65054369 | None:intergenic | 35.0% |
| ATGGATGATTGGAAGGTTTA+GGG | - | chr4_1:65054446-65054465 | None:intergenic | 35.0% | |
| AATGGATGATTGGAAGGTTT+AGG | - | chr4_1:65054447-65054466 | None:intergenic | 35.0% | |
| GATTTACACACCAAAAGAAC+TGG | + | chr4_1:65054556-65054575 | Msa0564390:CDS | 35.0% | |
| TTAGGAGCCTCTAAACTTAT+TGG | - | chr4_1:65054622-65054641 | None:intergenic | 35.0% | |
| AATAAGTTTAGAGGCTCCTA+AGG | + | chr4_1:65054621-65054640 | Msa0564390:CDS | 35.0% | |
| ATAAGTTTAGAGGCTCCTAA+GGG | + | chr4_1:65054622-65054641 | Msa0564390:CDS | 35.0% | |
| ATCACCTTCATTCTGATCAA+TGG | - | chr4_1:65054674-65054693 | None:intergenic | 35.0% | |
| TAGATACAAAAACTAAGGCC+CGG | - | chr4_1:65054928-65054947 | None:intergenic | 35.0% | |
| ! | AGCAGCTTTTTATCAACATC+AGG | - | chr4_1:65055004-65055023 | None:intergenic | 35.0% |
| ! | TGTTGATAAAAAGCTGCTTG+AGG | + | chr4_1:65055006-65055025 | Msa0564390:CDS | 35.0% |
| CTTGAGGAACTTGAATCAAT+GGG | + | chr4_1:65055022-65055041 | Msa0564390:CDS | 35.0% | |
| ATCCCAGTTGAAACTATCTT+TGG | + | chr4_1:65055154-65055173 | Msa0564390:intron | 35.0% | |
| TCCCAGTTGAAACTATCTTT+GGG | + | chr4_1:65055155-65055174 | Msa0564390:intron | 35.0% | |
| TAATAATCGGGAATTCGGTA+GGG | - | chr4_1:65055197-65055216 | None:intergenic | 35.0% | |
| ! | TGTTTTGTCTTAACCCTCAA+AGG | - | chr4_1:65055225-65055244 | None:intergenic | 35.0% |
| TCTTTATGGGTTTGCATTAC+CGG | + | chr4_1:65055250-65055269 | Msa0564390:intron | 35.0% | |
| TGTTGTAGCACAATAATGAC+CGG | - | chr4_1:65055272-65055291 | None:intergenic | 35.0% | |
| TTGATCATTAACGTGTTACC+AGG | + | chr4_1:65055352-65055371 | Msa0564390:intron | 35.0% | |
| ! | TTGCGAAGAACAAAGTATCA+AGG | + | chr4_1:65055444-65055463 | Msa0564390:intron | 35.0% |
| ! | CTTAGGCTTCTCTCTTTTAT+AGG | + | chr4_1:65055665-65055684 | Msa0564390:intron | 35.0% |
| !! | AGAAGCTTTAGCTTTACTGA+CGG | - | chr4_1:65056025-65056044 | None:intergenic | 35.0% |
| ATTGAATTCTGTTGTGGCAA+AGG | + | chr4_1:65056161-65056180 | Msa0564390:intron | 35.0% | |
| !!! | ATCACACCTTGTTTTATGGA+TGG | + | chr4_1:65056349-65056368 | Msa0564390:intron | 35.0% |
| CAAAGACCATCCATAAAACA+AGG | - | chr4_1:65056358-65056377 | None:intergenic | 35.0% | |
| ACATGCCCTTAATATACAAC+AGG | + | chr4_1:65056428-65056447 | Msa0564390:intron | 35.0% | |
| ATATACAACAGGATCAGTGA+TGG | + | chr4_1:65056439-65056458 | Msa0564390:intron | 35.0% | |
| AGCTATAATCTTAAGGGAGA+AGG | + | chr4_1:65056676-65056695 | Msa0564390:intron | 35.0% | |
| AGAAGAAGAAGAGAAGAGAA+TGG | + | chr4_1:65056712-65056731 | Msa0564390:CDS | 35.0% | |
| AATGGAGAGAGAAAGAGAAA+AGG | + | chr4_1:65056730-65056749 | Msa0564390:CDS | 35.0% | |
| TGAAACTCAATGAGATGAGT+GGG | - | chr4_1:65056782-65056801 | None:intergenic | 35.0% | |
| CGTCTATGAGTTTATGCTTT+GGG | + | chr4_1:65056891-65056910 | Msa0564390:intron | 35.0% | |
| GTCTATGAGTTTATGCTTTG+GGG | + | chr4_1:65056892-65056911 | Msa0564390:intron | 35.0% | |
| TTTGGGGATAGTTGATCTTA+AGG | + | chr4_1:65056908-65056927 | Msa0564390:intron | 35.0% | |
| !! | TTAAGGCTTTGTTTGAGAGT+TGG | + | chr4_1:65056925-65056944 | Msa0564390:intron | 35.0% |
| ! | ACTTTGGGGGTGAAAAATAT+AGG | + | chr4_1:65056956-65056975 | Msa0564390:intron | 35.0% |
| ! | CTTTGGGGGTGAAAAATATA+GGG | + | chr4_1:65056957-65056976 | Msa0564390:intron | 35.0% |
| TTTGGGGGTGAAAAATATAG+GGG | + | chr4_1:65056958-65056977 | Msa0564390:intron | 35.0% | |
| !!! | GTATTAGAGGATAGTTTTGG+AGG | - | chr4_1:65057117-65057136 | None:intergenic | 35.0% |
| ATTGAAAGGAGAGAACTTTG+GGG | - | chr4_1:65057195-65057214 | None:intergenic | 35.0% | |
| CATTGAAAGGAGAGAACTTT+GGG | - | chr4_1:65057196-65057215 | None:intergenic | 35.0% | |
| ACATTGAAAGGAGAGAACTT+TGG | - | chr4_1:65057197-65057216 | None:intergenic | 35.0% | |
| !! | AAAGCTGTGATGGTCTTATT+CGG | - | chr4_1:65057290-65057309 | None:intergenic | 35.0% |
| GAATGACTTCTCAGATATTG+AGG | - | chr4_1:65057377-65057396 | None:intergenic | 35.0% | |
| AAGAAGACAACGAGAGAAAA+CGG | + | chr4_1:65057471-65057490 | Msa0564390:CDS | 35.0% | |
| ACATAGGATGTGAGAAAACA+GGG | - | chr4_1:65057505-65057524 | None:intergenic | 35.0% | |
| AACATAGGATGTGAGAAAAC+AGG | - | chr4_1:65057506-65057525 | None:intergenic | 35.0% | |
| AGCAGAATTCTATTGTAGCA+GGG | - | chr4_1:65057544-65057563 | None:intergenic | 35.0% | |
| AAGCAGAATTCTATTGTAGC+AGG | - | chr4_1:65057545-65057564 | None:intergenic | 35.0% | |
| TTTGAGAAAAGCAGAGAAAG+AGG | + | chr4_1:65057584-65057603 | Msa0564390:CDS | 35.0% | |
| GCAAAAATTGGAAGAAGACA+AGG | + | chr4_1:65057635-65057654 | Msa0564390:CDS | 35.0% | |
| CGTCTAATTTAACAGGACTT+CGG | + | chr4_1:65057675-65057694 | Msa0564390:intron | 35.0% | |
| CAAATTGACAACTGTCATTG+GGG | + | chr4_1:65057756-65057775 | Msa0564390:intron | 35.0% | |
| AAATTGACAACTGTCATTGG+GGG | + | chr4_1:65057757-65057776 | Msa0564390:intron | 35.0% | |
| AAGAAGACGAAAACTTGGAT+TGG | + | chr4_1:65057822-65057841 | Msa0564390:CDS | 35.0% | |
| GGTATTATCTTGTCCAGAAA+TGG | + | chr4_1:65057897-65057916 | Msa0564390:intron | 35.0% | |
| ATTATCTTGTCCAGAAATGG+TGG | + | chr4_1:65057900-65057919 | Msa0564390:intron | 35.0% | |
| GAGACAGACCATTAATAGAA+AGG | - | chr4_1:65058285-65058304 | None:intergenic | 35.0% | |
| !! | AAAAGCATGTGGTTTTCTTC+TGG | + | chr4_1:65058534-65058553 | Msa0564390:intron | 35.0% |
| CACTCTTTAAGCACTTTAAG+TGG | - | chr4_1:65058698-65058717 | None:intergenic | 35.0% | |
| TCATGTTCCTAGTTAGCTAA+TGG | + | chr4_1:65058770-65058789 | Msa0564390:intron | 35.0% | |
| TCAACACACTAGCTGTAAAT+TGG | - | chr4_1:65058905-65058924 | None:intergenic | 35.0% | |
| TCTTCATTATATGTGGGACT+TGG | - | chr4_1:65059120-65059139 | None:intergenic | 35.0% | |
| CTAATCTTTACAAAACCGGT+TGG | - | chr4_1:65059159-65059178 | None:intergenic | 35.0% | |
| GATATAAATAGTTGGTCGAC+AGG | - | chr4_1:65059218-65059237 | None:intergenic | 35.0% | |
| CTTCATTCTATGCAAGACTT+GGG | - | chr4_1:65059285-65059304 | None:intergenic | 35.0% | |
| TCTTCATTCTATGCAAGACT+TGG | - | chr4_1:65059286-65059305 | None:intergenic | 35.0% | |
| ATACATTTGAAGGACCGATT+TGG | + | chr4_1:65059394-65059413 | Msa0564390:intron | 35.0% | |
| !!! | GTTTGTTTTATTCTTGGAGC+AGG | + | chr4_1:65059668-65059687 | Msa0564390:intron | 35.0% |
| CAAACTCTTCTAACCTATGT+GGG | + | chr4_1:65059720-65059739 | Msa0564390:CDS | 35.0% | |
| AAACTCTTCTAACCTATGTG+GGG | + | chr4_1:65059721-65059740 | Msa0564390:CDS | 35.0% | |
| ! | TTTTTCTTCAGCAGGATTTC+TGG | - | chr4_1:65059754-65059773 | None:intergenic | 35.0% |
| ATCCTGCTGAAGAAAAATTC+AGG | + | chr4_1:65059757-65059776 | Msa0564390:CDS | 35.0% | |
| ! | TTCCTGAATTTTTCTTCAGC+AGG | - | chr4_1:65059762-65059781 | None:intergenic | 35.0% |
| ! | TCTTAGTAACACAGCTTTTC+AGG | + | chr4_1:65059788-65059807 | Msa0564390:CDS | 35.0% |
| GGTAAGAAAATCCGTTAAGA+TGG | + | chr4_1:65059809-65059828 | Msa0564390:intron | 35.0% | |
| AGTGTAGCTACTAATACCTA+GGG | + | chr4_1:65059865-65059884 | Msa0564390:intron | 35.0% | |
| GAGTTATAGAAGCAACTAAG+TGG | - | chr4_1:65060026-65060045 | None:intergenic | 35.0% | |
| GATTAGGTATGTGTTTGGTA+GGG | - | chr4_1:65060069-65060088 | None:intergenic | 35.0% | |
| !! | TTCAGAGTTTTGATCGGATT+AGG | - | chr4_1:65060085-65060104 | None:intergenic | 35.0% |
| !! | CCGATCAAAACTCTGAAATT+TGG | + | chr4_1:65060088-65060107 | Msa0564390:intron | 35.0% |
| GTATAATATTTGGGTCCATG+TGG | - | chr4_1:65060189-65060208 | None:intergenic | 35.0% | |
| GACCCAAATATTATACCATC+AGG | + | chr4_1:65060193-65060212 | Msa0564390:intron | 35.0% | |
| !!! | CAGGAGTTTTTAGTTGACAT+TGG | + | chr4_1:65060227-65060246 | Msa0564390:intron | 35.0% |
| TGTGTTTAACAGGAAAGAGT+TGG | + | chr4_1:65060396-65060415 | Msa0564390:intron | 35.0% | |
| !!! | GTGAAGTTTTGTTTTTGGCT+AGG | + | chr4_1:65060478-65060497 | Msa0564390:CDS | 35.0% |
| ! | GGCTTTATAGGTGTAGGTAA+GGG | - | chr4_1:65054163-65054182 | None:intergenic | 40.0% |
| !! | TGGCTTTATAGGTGTAGGTA+AGG | - | chr4_1:65054164-65054183 | None:intergenic | 40.0% |
| GGTGGATCCAATTGGTATAT+TGG | - | chr4_1:65054215-65054234 | None:intergenic | 40.0% | |
| TTGCGGTACTCTCTTGAAAT+CGG | + | chr4_1:65054285-65054304 | Msa0564390:CDS | 40.0% | |
| TTCAGAGAAATTGGAGTGTG+AGG | - | chr4_1:65054341-65054360 | None:intergenic | 40.0% | |
| ! | TGATTGGAAGGTTTAGGGTT+TGG | - | chr4_1:65054441-65054460 | None:intergenic | 40.0% |
| AGCGAAGCCAATAAGTTTAG+AGG | + | chr4_1:65054612-65054631 | Msa0564390:CDS | 40.0% | |
| TAAGTTTAGAGGCTCCTAAG+GGG | + | chr4_1:65054623-65054642 | Msa0564390:CDS | 40.0% | |
| GGAACCATTGATCAGAATGA+AGG | + | chr4_1:65054667-65054686 | Msa0564390:CDS | 40.0% | |
| GCTTGAGGAACTTGAATCAA+TGG | + | chr4_1:65055021-65055040 | Msa0564390:CDS | 40.0% | |
| !!! | ACAAGGGCACTTCATTTTTC+TGG | + | chr4_1:65055064-65055083 | Msa0564390:CDS | 40.0% |
| GCCCAAAGATAGTTTCAACT+GGG | - | chr4_1:65055159-65055178 | None:intergenic | 40.0% | |
| TGCCCAAAGATAGTTTCAAC+TGG | - | chr4_1:65055160-65055179 | None:intergenic | 40.0% | |
| CTAATAATCGGGAATTCGGT+AGG | - | chr4_1:65055198-65055217 | None:intergenic | 40.0% | |
| !! | TGGATTCTATTGGTTTGGGT+TGG | + | chr4_1:65055419-65055438 | Msa0564390:intron | 40.0% |
| !! | GGATTCTATTGGTTTGGGTT+GGG | + | chr4_1:65055420-65055439 | Msa0564390:intron | 40.0% |
| !! | AAGGGCATTTCATCTATGTC+AGG | - | chr4_1:65055743-65055762 | None:intergenic | 40.0% |
| TGACATAGATGAAATGCCCT+TGG | + | chr4_1:65055742-65055761 | Msa0564390:CDS | 40.0% | |
| ATTCTGTTGTGGCAAAGGAT+TGG | + | chr4_1:65056166-65056185 | Msa0564390:intron | 40.0% | |
| TTCTGTTGTGGCAAAGGATT+GGG | + | chr4_1:65056167-65056186 | Msa0564390:intron | 40.0% | |
| GATGGTCTTTGTAATGTGTC+TGG | + | chr4_1:65056367-65056386 | Msa0564390:intron | 40.0% | |
| GTGTTCTCTATCATTGCATG+CGG | + | chr4_1:65056398-65056417 | Msa0564390:intron | 40.0% | |
| TGTTCTCTATCATTGCATGC+GGG | + | chr4_1:65056399-65056418 | Msa0564390:intron | 40.0% | |
| ACATGTACTGTGAATGACTG+AGG | - | chr4_1:65056538-65056557 | None:intergenic | 40.0% | |
| ! | ATGCAAGCATGTGTTACTGT+AGG | - | chr4_1:65056574-65056593 | None:intergenic | 40.0% |
| TGAGATGAGTGGGAAACAAA+GGG | - | chr4_1:65056772-65056791 | None:intergenic | 40.0% | |
| ATGAGATGAGTGGGAAACAA+AGG | - | chr4_1:65056773-65056792 | None:intergenic | 40.0% | |
| CTGAAACTCAATGAGATGAG+TGG | - | chr4_1:65056783-65056802 | None:intergenic | 40.0% | |
| AAGCATAAACTCATAGACGC+AGG | - | chr4_1:65056890-65056909 | None:intergenic | 40.0% | |
| GCGTCTATGAGTTTATGCTT+TGG | + | chr4_1:65056890-65056909 | Msa0564390:intron | 40.0% | |
| TTGAAAGGAGAGAACTTTGG+GGG | - | chr4_1:65057194-65057213 | None:intergenic | 40.0% | |
| GTGGGGAAATTTCTCTATGT+AGG | - | chr4_1:65057255-65057274 | None:intergenic | 40.0% | |
| ATTCGGGACATTCATGATGT+GGG | - | chr4_1:65057273-65057292 | None:intergenic | 40.0% | |
| TATTCGGGACATTCATGATG+TGG | - | chr4_1:65057274-65057293 | None:intergenic | 40.0% | |
| !! | AAGCTGTGATGGTCTTATTC+GGG | - | chr4_1:65057289-65057308 | None:intergenic | 40.0% |
| ATTCAGGAGAGAATTCGAGT+CGG | + | chr4_1:65057419-65057438 | Msa0564390:intron | 40.0% | |
| CATAGGATGTGAGAAAACAG+GGG | - | chr4_1:65057504-65057523 | None:intergenic | 40.0% | |
| ! | AGAATTCTGCTTCCTTTTGC+AGG | + | chr4_1:65057553-65057572 | Msa0564390:intron | 40.0% |
| CAAAGCTAACAACCTGCAAA+AGG | - | chr4_1:65057568-65057587 | None:intergenic | 40.0% | |
| AGCTGTTGTAGAGGAGAAAA+AGG | + | chr4_1:65057876-65057895 | Msa0564390:CDS | 40.0% | |
| TTTCACTGGATGAGATTCTG+TGG | + | chr4_1:65058065-65058084 | Msa0564390:intron | 40.0% | |
| CACTTGCTTAACACTGAACT+AGG | - | chr4_1:65058099-65058118 | None:intergenic | 40.0% | |
| GTAATATGAGAAGAGGGAGA+CGG | + | chr4_1:65058406-65058425 | Msa0564390:intron | 40.0% | |
| AAGTGCAGTCGTTATTACTC+AGG | - | chr4_1:65058441-65058460 | None:intergenic | 40.0% | |
| !! | ATGTGGTTTTCTTCTGGAGA+TGG | + | chr4_1:65058540-65058559 | Msa0564390:intron | 40.0% |
| TCATGTTCCTATCCAAATGG+AGG | - | chr4_1:65059017-65059036 | None:intergenic | 40.0% | |
| !! | AAAACCGGTTGGTAAAGTGA+GGG | - | chr4_1:65059148-65059167 | None:intergenic | 40.0% |
| ACAGGTTCGGATACCATATT+AGG | - | chr4_1:65059200-65059219 | None:intergenic | 40.0% | |
| AAATAGTTGGTCGACAGGTT+CGG | - | chr4_1:65059213-65059232 | None:intergenic | 40.0% | |
| GGTGGGAGGATATAAATAGT+TGG | - | chr4_1:65059226-65059245 | None:intergenic | 40.0% | |
| ATACTCACACCCAACACTAT+AGG | - | chr4_1:65059252-65059271 | None:intergenic | 40.0% | |
| ! | ATAGTGTTGGGTGTGAGTAT+TGG | + | chr4_1:65059252-65059271 | Msa0564390:intron | 40.0% |
| !! | AAAACCGGCTTGTAAAATGG+AGG | - | chr4_1:65059341-65059360 | None:intergenic | 40.0% |
| !! | CACAAAACCGGCTTGTAAAA+TGG | - | chr4_1:65059344-65059363 | None:intergenic | 40.0% |
| !! | TTTTACAAGCCGGTTTTGTG+AGG | + | chr4_1:65059344-65059363 | Msa0564390:intron | 40.0% |
| CTAACTCATCCTCACAAAAC+CGG | - | chr4_1:65059356-65059375 | None:intergenic | 40.0% | |
| GATGTCACATAAGTGCTTGA+AGG | + | chr4_1:65059449-65059468 | Msa0564390:intron | 40.0% | |
| CCACATAGGTTAGAAGAGTT+TGG | - | chr4_1:65059722-65059741 | None:intergenic | 40.0% | |
| CCAAACTCTTCTAACCTATG+TGG | + | chr4_1:65059719-65059738 | Msa0564390:CDS | 40.0% | |
| ! | CTTCGTACTTTGGCATTTTC+AGG | + | chr4_1:65059836-65059855 | Msa0564390:intron | 40.0% |
| CAGTGTAGCTACTAATACCT+AGG | + | chr4_1:65059864-65059883 | Msa0564390:intron | 40.0% | |
| GAAGAGATCTTTAGGCTGTT+TGG | + | chr4_1:65059926-65059945 | Msa0564390:intron | 40.0% | |
| ATCTTCTCAAACTCACGTCT+AGG | + | chr4_1:65059959-65059978 | Msa0564390:intron | 40.0% | |
| GGATTAGGTATGTGTTTGGT+AGG | - | chr4_1:65060070-65060089 | None:intergenic | 40.0% | |
| ! | GATCGGATTAGGTATGTGTT+TGG | - | chr4_1:65060074-65060093 | None:intergenic | 40.0% |
| ATGAGCATTATAGCCGAGTT+TGG | + | chr4_1:65060112-65060131 | Msa0564390:intron | 40.0% | |
| TGAGCATTATAGCCGAGTTT+GGG | + | chr4_1:65060113-65060132 | Msa0564390:intron | 40.0% | |
| TAATATTTGGGTCCATGTGG+TGG | - | chr4_1:65060186-65060205 | None:intergenic | 40.0% | |
| ! | TTCTCGTCTAAAGCTACATC+AGG | + | chr4_1:65060289-65060308 | Msa0564390:intron | 40.0% |
| ! | TCTCGTCTAAAGCTACATCA+GGG | + | chr4_1:65060290-65060309 | Msa0564390:intron | 40.0% |
| !! | GAAAGAGTTGGTGCTTTGAA+AGG | + | chr4_1:65060408-65060427 | Msa0564390:CDS | 40.0% |
| TCTCAAACCCGCAAATTTCA+AGG | - | chr4_1:65060446-65060465 | None:intergenic | 40.0% | |
| !!! | TGGCGGTGAAGTTTTGTTTT+TGG | + | chr4_1:65060473-65060492 | Msa0564390:CDS | 40.0% |
| !!! | TTTGTTTTTGGCTAGGGAGA+AGG | + | chr4_1:65060485-65060504 | Msa0564390:CDS | 40.0% |
| ATTGCAGTCCTAAATTCAGC+TGG | + | chr4_1:65060513-65060532 | Msa0564390:CDS | 40.0% | |
| GTTCAGATCCAGCTGAATTT+AGG | - | chr4_1:65060524-65060543 | None:intergenic | 40.0% | |
| ATTCCGGTGATTCGTTTCGT+CGG | - | chr4_1:65054236-65054255 | None:intergenic | 45.0% | |
| CGAAACGAATCACCGGAATA+TGG | + | chr4_1:65054237-65054256 | Msa0564390:exon | 45.0% | |
| !!! | AATACGGTTTTGGATCGGCA+AGG | - | chr4_1:65054409-65054428 | None:intergenic | 45.0% |
| ! | TTCAGTGTGCCCAGTTCTTT+TGG | - | chr4_1:65054569-65054588 | None:intergenic | 45.0% |
| !! | ACTTATTGGCTTCGCTGCTT+CGG | - | chr4_1:65054608-65054627 | None:intergenic | 45.0% |
| TGGGATTCTGAATTCCCCTT+AGG | - | chr4_1:65054640-65054659 | None:intergenic | 45.0% | |
| GGGAATTCAGAATCCCAAGA+GGG | + | chr4_1:65054643-65054662 | Msa0564390:CDS | 45.0% | |
| AATTCAGAATCCCAAGAGGG+TGG | + | chr4_1:65054646-65054665 | Msa0564390:CDS | 45.0% | |
| ATCAATGGTTCCACCCTCTT+GGG | - | chr4_1:65054659-65054678 | None:intergenic | 45.0% | |
| ! | ATCCTTATCTAGGGCCTGTT+TGG | + | chr4_1:65054730-65054749 | Msa0564390:intron | 45.0% |
| ATCCAAACAGGCCCTAGATA+AGG | - | chr4_1:65054735-65054754 | None:intergenic | 45.0% | |
| ACAAAAACTAAGGCCCGGTT+TGG | - | chr4_1:65054923-65054942 | None:intergenic | 45.0% | |
| ! | AATGAAGTGCCCTTGTTGCA+CGG | - | chr4_1:65055060-65055079 | None:intergenic | 45.0% |
| AAGCGGTATAAACTGATGCC+TGG | - | chr4_1:65055373-65055392 | None:intergenic | 45.0% | |
| ! | TATAGGTAACACTAGCCTCG+AGG | + | chr4_1:65055682-65055701 | Msa0564390:intron | 45.0% |
| AGATACCTGAGTGAACGATC+AGG | - | chr4_1:65056001-65056020 | None:intergenic | 45.0% | |
| !! | GTTTCTTCTGGGGTAAGAGA+GGG | - | chr4_1:65056051-65056070 | None:intergenic | 45.0% |
| !! | TGTTTCTTCTGGGGTAAGAG+AGG | - | chr4_1:65056052-65056071 | None:intergenic | 45.0% |
| TCTGTTGTGGCAAAGGATTG+GGG | + | chr4_1:65056168-65056187 | Msa0564390:intron | 45.0% | |
| !! | AGGCTTTGTTTGAGAGTTGG+AGG | + | chr4_1:65056928-65056947 | Msa0564390:intron | 45.0% |
| !! | GGCTTTGTTTGAGAGTTGGA+GGG | + | chr4_1:65056929-65056948 | Msa0564390:intron | 45.0% |
| !! | GCTTTGTTTGAGAGTTGGAG+GGG | + | chr4_1:65056930-65056949 | Msa0564390:intron | 45.0% |
| TGAAAGGAGAGAACTTTGGG+GGG | - | chr4_1:65057193-65057212 | None:intergenic | 45.0% | |
| TTCGGGACATTCATGATGTG+GGG | - | chr4_1:65057272-65057291 | None:intergenic | 45.0% | |
| AGGAGTTGCTTGAAGCAAAG+AGG | + | chr4_1:65057444-65057463 | Msa0564390:CDS | 45.0% | |
| AGAGAAAGAGGAAGAGCGAA+GGG | + | chr4_1:65057596-65057615 | Msa0564390:CDS | 45.0% | |
| GCGGAAAGAAGACGAAAACT+TGG | + | chr4_1:65057817-65057836 | Msa0564390:CDS | 45.0% | |
| !! | AAAACTTGGATTGGCTCCAG+AGG | + | chr4_1:65057831-65057850 | Msa0564390:CDS | 45.0% |
| CTCTACAACAGCTGAAGGTT+TGG | - | chr4_1:65057869-65057888 | None:intergenic | 45.0% | |
| CAAACCTTCAGCTGTTGTAG+AGG | + | chr4_1:65057867-65057886 | Msa0564390:CDS | 45.0% | |
| TTCTCCTCTACAACAGCTGA+AGG | - | chr4_1:65057874-65057893 | None:intergenic | 45.0% | |
| TGCAGAGTTTCCTGCCAATT+AGG | + | chr4_1:65057970-65057989 | Msa0564390:intron | 45.0% | |
| ! | GTTTTTGTGGCAGGCCTAAT+TGG | - | chr4_1:65057987-65058006 | None:intergenic | 45.0% |
| CACAAAAACCGAGCAGATGA+GGG | + | chr4_1:65057998-65058017 | Msa0564390:CDS | 45.0% | |
| TTCTCTCAAGCAGAACCACA+AGG | + | chr4_1:65058031-65058050 | Msa0564390:CDS | 45.0% | |
| AGTGCGCTTGACATCTAAAC+TGG | + | chr4_1:65058245-65058264 | Msa0564390:intron | 45.0% | |
| !! | AAAGTGCTTAAAGAGTGCCC+CGG | + | chr4_1:65058701-65058720 | Msa0564390:intron | 45.0% |
| TCCTAGTTAGCTAATGGCGT+TGG | + | chr4_1:65058776-65058795 | Msa0564390:intron | 45.0% | |
| TCCAACGCCATTAGCTAACT+AGG | - | chr4_1:65058780-65058799 | None:intergenic | 45.0% | |
| ATCCATATCGGTCCTCCATT+TGG | + | chr4_1:65059002-65059021 | Msa0564390:intron | 45.0% | |
| ATCCAAATGGAGGACCGATA+TGG | - | chr4_1:65059007-65059026 | None:intergenic | 45.0% | |
| TATCGGTCCTCCATTTGGAT+AGG | + | chr4_1:65059007-65059026 | Msa0564390:intron | 45.0% | |
| AAGACCCTCACTTTACCAAC+CGG | + | chr4_1:65059141-65059160 | Msa0564390:intron | 45.0% | |
| !! | CAAAACCGGTTGGTAAAGTG+AGG | - | chr4_1:65059149-65059168 | None:intergenic | 45.0% |
| ! | GACACCTCCATTTTACAAGC+CGG | + | chr4_1:65059334-65059353 | Msa0564390:intron | 45.0% |
| !! | CATTTGAAGGACCGATTTGG+TGG | + | chr4_1:65059397-65059416 | Msa0564390:intron | 45.0% |
| GGCAGCGAATGTGACATTTA+TGG | + | chr4_1:65059418-65059437 | Msa0564390:intron | 45.0% | |
| TTGGAATGCTCTCTTCACTC+TGG | - | chr4_1:65059703-65059722 | None:intergenic | 45.0% | |
| TTCTCAAACTCACGTCTAGG+TGG | + | chr4_1:65059962-65059981 | Msa0564390:intron | 45.0% | |
| TGACTCAAAGGTCCCAAACT+CGG | - | chr4_1:65060128-65060147 | None:intergenic | 45.0% | |
| CCTGAAACTGATACACCTGA+TGG | - | chr4_1:65060211-65060230 | None:intergenic | 45.0% | |
| CCATCAGGTGTATCAGTTTC+AGG | + | chr4_1:65060208-65060227 | Msa0564390:intron | 45.0% | |
| !! | AGAGTTGGTGCTTTGAAAGG+AGG | + | chr4_1:65060411-65060430 | Msa0564390:CDS | 45.0% |
| !!! | AATTTTATATTTACAATATT+GGG | + | chr4_1:65056827-65056846 | Msa0564390:intron | 5.0% |
| !!! | TGAAAATAATATTTTTAAAT+GGG | - | chr4_1:65058745-65058764 | None:intergenic | 5.0% |
| !!! | ATGAAAATAATATTTTTAAA+TGG | - | chr4_1:65058746-65058765 | None:intergenic | 5.0% |
| GAACCGGATCTATGTGGGAT+TGG | + | chr4_1:65054123-65054142 | Msa0564390:five_prime_UTR | 50.0% | |
| CGACCAATCCCACATAGATC+CGG | - | chr4_1:65054129-65054148 | None:intergenic | 50.0% | |
| GGTGTAGGTAAGGGTGAGAA+GGG | - | chr4_1:65054154-65054173 | None:intergenic | 50.0% | |
| AGGTGTAGGTAAGGGTGAGA+AGG | - | chr4_1:65054155-65054174 | None:intergenic | 50.0% | |
| GTTTCGTCGGTGGATCCAAT+TGG | - | chr4_1:65054223-65054242 | None:intergenic | 50.0% | |
| ACGAATCACCGGAATATGGC+AGG | + | chr4_1:65054241-65054260 | Msa0564390:exon | 50.0% | |
| CGAATCACCGGAATATGGCA+GGG | + | chr4_1:65054242-65054261 | Msa0564390:exon | 50.0% | |
| GAATCACCGGAATATGGCAG+GGG | + | chr4_1:65054243-65054262 | Msa0564390:exon | 50.0% | |
| !!! | GGTTTTGGATCGGCAAGGTT+TGG | - | chr4_1:65054404-65054423 | None:intergenic | 50.0% |
| GGGGAATTCAGAATCCCAAG+AGG | + | chr4_1:65054642-65054661 | Msa0564390:CDS | 50.0% | |
| GATCAATGGTTCCACCCTCT+TGG | - | chr4_1:65054660-65054679 | None:intergenic | 50.0% | |
| TTTCAACAGCCCGTGCAACA+AGG | + | chr4_1:65055047-65055066 | Msa0564390:CDS | 50.0% | |
| TTCAACAGCCCGTGCAACAA+GGG | + | chr4_1:65055048-65055067 | Msa0564390:CDS | 50.0% | |
| ! | ATGAAGTGCCCTTGTTGCAC+GGG | - | chr4_1:65055059-65055078 | None:intergenic | 50.0% |
| TAATCGGGAATTCGGTAGGG+AGG | - | chr4_1:65055194-65055213 | None:intergenic | 50.0% | |
| CTATGTCAGGCGTATTCTCG+TGG | - | chr4_1:65055730-65055749 | None:intergenic | 50.0% | |
| GAGTGAACGATCAGGTCAGA+AGG | - | chr4_1:65055993-65056012 | None:intergenic | 50.0% | |
| TCTGACCTGATCGTTCACTC+AGG | + | chr4_1:65055993-65056012 | Msa0564390:intron | 50.0% | |
| TTGTTTGAGAGTTGGAGGGG+AGG | + | chr4_1:65056933-65056952 | Msa0564390:intron | 50.0% | |
| GGAGAGAATTCGAGTCGGTA+AGG | + | chr4_1:65057424-65057443 | Msa0564390:intron | 50.0% | |
| CAGAGAAAGAGGAAGAGCGA+AGG | + | chr4_1:65057595-65057614 | Msa0564390:CDS | 50.0% | |
| GCTGAAGGTTTGGCTGTTGA+AGG | - | chr4_1:65057859-65057878 | None:intergenic | 50.0% | |
| ! | ATCTGCTCGGTTTTTGTGGC+AGG | - | chr4_1:65057996-65058015 | None:intergenic | 50.0% |
| ! | CCTCATCTGCTCGGTTTTTG+TGG | - | chr4_1:65058000-65058019 | None:intergenic | 50.0% |
| CCACAAAAACCGAGCAGATG+AGG | + | chr4_1:65057997-65058016 | Msa0564390:CDS | 50.0% | |
| ! | TCTTCTGGAGATGGAGTCAC+TGG | + | chr4_1:65058549-65058568 | Msa0564390:intron | 50.0% |
| ! | CTTCTGGAGATGGAGTCACT+GGG | + | chr4_1:65058550-65058569 | Msa0564390:intron | 50.0% |
| !! | AAGTGCTTAAAGAGTGCCCC+GGG | + | chr4_1:65058702-65058721 | Msa0564390:intron | 50.0% |
| AAATGTTAACGAGTGCCCCC+GGG | - | chr4_1:65058722-65058741 | None:intergenic | 50.0% | |
| GAAATGTTAACGAGTGCCCC+CGG | - | chr4_1:65058723-65058742 | None:intergenic | 50.0% | |
| !! | AACACTATAGGCTTGGTGGG+AGG | - | chr4_1:65059240-65059259 | None:intergenic | 50.0% |
| TCCCACCAAGCCTATAGTGT+TGG | + | chr4_1:65059239-65059258 | Msa0564390:intron | 50.0% | |
| ! | CCCAACACTATAGGCTTGGT+GGG | - | chr4_1:65059243-65059262 | None:intergenic | 50.0% |
| CCCACCAAGCCTATAGTGTT+GGG | + | chr4_1:65059240-65059259 | Msa0564390:intron | 50.0% | |
| ACCCAACACTATAGGCTTGG+TGG | - | chr4_1:65059244-65059263 | None:intergenic | 50.0% | |
| CACACCCAACACTATAGGCT+TGG | - | chr4_1:65059247-65059266 | None:intergenic | 50.0% | |
| CACATTCGCTGCCACCAAAT+CGG | - | chr4_1:65059411-65059430 | None:intergenic | 50.0% | |
| TCTGGCAACATTCCCCACAT+AGG | - | chr4_1:65059736-65059755 | None:intergenic | 50.0% | |
| ! | TACGAAGCGCCCCATCTTAA+CGG | - | chr4_1:65059823-65059842 | None:intergenic | 50.0% |
| GTGTTTGGTAGGGCGTGTAT+TGG | - | chr4_1:65060059-65060078 | None:intergenic | 50.0% | |
| AGAATCCTGCATCCACCACA+TGG | + | chr4_1:65060171-65060190 | Msa0564390:intron | 50.0% | |
| TGCGGGTTTGAGAAGATCGA+TGG | + | chr4_1:65060453-65060472 | Msa0564390:CDS | 50.0% | |
| GGGTTTGAGAAGATCGATGG+CGG | + | chr4_1:65060456-65060475 | Msa0564390:CDS | 50.0% | |
| CCACCGACGAAACGAATCAC+CGG | + | chr4_1:65054230-65054249 | Msa0564390:five_prime_UTR | 55.0% | |
| GCGAAACCCCTGCCATATTC+CGG | - | chr4_1:65054252-65054271 | None:intergenic | 55.0% | |
| ! | GAGGTTGAGAACGGGTTCAG+TGG | - | chr4_1:65054365-65054384 | None:intergenic | 55.0% |
| GAGCAGACGAGGTTGAGAAC+GGG | - | chr4_1:65054373-65054392 | None:intergenic | 55.0% | |
| GGAGCAGACGAGGTTGAGAA+CGG | - | chr4_1:65054374-65054393 | None:intergenic | 55.0% | |
| ! | TCGGCAAGGTTTGGAGCAAG+TGG | - | chr4_1:65054395-65054414 | None:intergenic | 55.0% |
| TCCAAGTTACAGCAGCCTCG+AGG | - | chr4_1:65055700-65055719 | None:intergenic | 55.0% | |
| AGAGTTGGAGGGGAGGACTT+TGG | + | chr4_1:65056940-65056959 | Msa0564390:intron | 55.0% | |
| GAGTTGGAGGGGAGGACTTT+GGG | + | chr4_1:65056941-65056960 | Msa0564390:intron | 55.0% | |
| AGTTGGAGGGGAGGACTTTG+GGG | + | chr4_1:65056942-65056961 | Msa0564390:intron | 55.0% | |
| TTGGCTGTTGAAGGCTCCTC+TGG | - | chr4_1:65057850-65057869 | None:intergenic | 55.0% | |
| TTGTGGCAGGCCTAATTGGC+AGG | - | chr4_1:65057983-65058002 | None:intergenic | 55.0% | |
| CAAGCACTCCCTCATCTGCT+CGG | - | chr4_1:65058009-65058028 | None:intergenic | 55.0% | |
| GAAGAGGGAGACGGCGATAT+AGG | + | chr4_1:65058415-65058434 | Msa0564390:intron | 55.0% | |
| ! | GTCTTGTTAACGAGTGCCCC+CGG | + | chr4_1:65058572-65058591 | Msa0564390:intron | 55.0% |
| TCTTGTTAACGAGTGCCCCC+GGG | + | chr4_1:65058573-65058592 | Msa0564390:intron | 55.0% | |
| !! | ATGCTTAAAGAGTGCCCCGG+GGG | - | chr4_1:65058591-65058610 | None:intergenic | 55.0% |
| !! | GATGCTTAAAGAGTGCCCCG+GGG | - | chr4_1:65058592-65058611 | None:intergenic | 55.0% |
| !! | GGATGCTTAAAGAGTGCCCC+GGG | - | chr4_1:65058593-65058612 | None:intergenic | 55.0% |
| !! | GGGATGCTTAAAGAGTGCCC+CGG | - | chr4_1:65058594-65058613 | None:intergenic | 55.0% |
| !! | AGTGCTTAAAGAGTGCCCCG+GGG | + | chr4_1:65058703-65058722 | Msa0564390:intron | 55.0% |
| AATGTTAACGAGTGCCCCCG+GGG | - | chr4_1:65058721-65058740 | None:intergenic | 55.0% | |
| ! | AGATGGGGCGCTTCGTACTT+TGG | + | chr4_1:65059826-65059845 | Msa0564390:intron | 55.0% |
| CCGGTGATTCGTTTCGTCGG+TGG | - | chr4_1:65054233-65054252 | None:intergenic | 60.0% | |
| TCGCTCCAGTGCGGTGATTG+CGG | + | chr4_1:65054268-65054287 | Msa0564390:CDS | 60.0% | |
| ! | GAGTACCGCAATCACCGCAC+TGG | - | chr4_1:65054276-65054295 | None:intergenic | 60.0% |
| TGGAGCAAGTGGAGCAGACG+AGG | - | chr4_1:65054384-65054403 | None:intergenic | 60.0% | |
| GCCTCGAGGCTGCTGTAACT+TGG | + | chr4_1:65055696-65055715 | Msa0564390:CDS | 60.0% | |
| GTTGGAGGGGAGGACTTTGG+GGG | + | chr4_1:65056943-65056962 | Msa0564390:intron | 60.0% | |
| CTTGTTAACGAGTGCCCCCG+GGG | + | chr4_1:65058574-65058593 | Msa0564390:intron | 60.0% | |
| !! | GTGCTTAAAGAGTGCCCCGG+GGG | + | chr4_1:65058704-65058723 | Msa0564390:intron | 60.0% |
| !! | TGGGTCCATGTGGTGGATGC+AGG | - | chr4_1:65060179-65060198 | None:intergenic | 60.0% |
| GCAGGGGTTTCGCTCCAGTG+CGG | + | chr4_1:65054259-65054278 | Msa0564390:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 65054121 | 65060894 | 65054121 | ID=Msa0564390;Name=Msa0564390 |
| chr4_1 | mRNA | 65054121 | 65060894 | 65054121 | ID=Msa0564390-mRNA-1;Parent=Msa0564390;Name=Msa0564390-mRNA-1;_AED=0.05;_eAED=0.05;_QI=135|1|1|1|0.91|0.84|13|269|408 |
| chr4_1 | exon | 65054121 | 65054423 | 65054121 | ID=Msa0564390-mRNA-1:exon:20897;Parent=Msa0564390-mRNA-1 |
| chr4_1 | exon | 65054550 | 65054688 | 65054550 | ID=Msa0564390-mRNA-1:exon:20898;Parent=Msa0564390-mRNA-1 |
| chr4_1 | exon | 65054990 | 65055085 | 65054990 | ID=Msa0564390-mRNA-1:exon:20899;Parent=Msa0564390-mRNA-1 |
| chr4_1 | exon | 65055687 | 65055763 | 65055687 | ID=Msa0564390-mRNA-1:exon:20900;Parent=Msa0564390-mRNA-1 |
| chr4_1 | exon | 65056015 | 65056094 | 65056015 | ID=Msa0564390-mRNA-1:exon:20901;Parent=Msa0564390-mRNA-1 |
| chr4_1 | exon | 65056691 | 65056751 | 65056691 | ID=Msa0564390-mRNA-1:exon:20902;Parent=Msa0564390-mRNA-1 |
| chr4_1 | exon | 65057425 | 65057492 | 65057425 | ID=Msa0564390-mRNA-1:exon:20903;Parent=Msa0564390-mRNA-1 |
| chr4_1 | exon | 65057575 | 65057656 | 65057575 | ID=Msa0564390-mRNA-1:exon:20904;Parent=Msa0564390-mRNA-1 |
| chr4_1 | exon | 65057817 | 65057897 | 65057817 | ID=Msa0564390-mRNA-1:exon:20905;Parent=Msa0564390-mRNA-1 |
| chr4_1 | exon | 65057975 | 65058052 | 65057975 | ID=Msa0564390-mRNA-1:exon:20906;Parent=Msa0564390-mRNA-1 |
| chr4_1 | exon | 65059690 | 65059809 | 65059690 | ID=Msa0564390-mRNA-1:exon:20907;Parent=Msa0564390-mRNA-1 |
| chr4_1 | exon | 65060408 | 65060825 | 65060408 | ID=Msa0564390-mRNA-1:exon:20908;Parent=Msa0564390-mRNA-1 |
| chr4_1 | exon | 65060867 | 65060894 | 65060867 | ID=Msa0564390-mRNA-1:exon:20909;Parent=Msa0564390-mRNA-1 |
| chr4_1 | five_prime_UTR | 65054121 | 65054255 | 65054121 | ID=Msa0564390-mRNA-1:five_prime_utr;Parent=Msa0564390-mRNA-1 |
| chr4_1 | CDS | 65054256 | 65054423 | 65054256 | ID=Msa0564390-mRNA-1:cds;Parent=Msa0564390-mRNA-1 |
| chr4_1 | CDS | 65054550 | 65054688 | 65054550 | ID=Msa0564390-mRNA-1:cds;Parent=Msa0564390-mRNA-1 |
| chr4_1 | CDS | 65054990 | 65055085 | 65054990 | ID=Msa0564390-mRNA-1:cds;Parent=Msa0564390-mRNA-1 |
| chr4_1 | CDS | 65055687 | 65055763 | 65055687 | ID=Msa0564390-mRNA-1:cds;Parent=Msa0564390-mRNA-1 |
| chr4_1 | CDS | 65056015 | 65056094 | 65056015 | ID=Msa0564390-mRNA-1:cds;Parent=Msa0564390-mRNA-1 |
| chr4_1 | CDS | 65056691 | 65056751 | 65056691 | ID=Msa0564390-mRNA-1:cds;Parent=Msa0564390-mRNA-1 |
| chr4_1 | CDS | 65057425 | 65057492 | 65057425 | ID=Msa0564390-mRNA-1:cds;Parent=Msa0564390-mRNA-1 |
| chr4_1 | CDS | 65057575 | 65057656 | 65057575 | ID=Msa0564390-mRNA-1:cds;Parent=Msa0564390-mRNA-1 |
| chr4_1 | CDS | 65057817 | 65057897 | 65057817 | ID=Msa0564390-mRNA-1:cds;Parent=Msa0564390-mRNA-1 |
| chr4_1 | CDS | 65057975 | 65058052 | 65057975 | ID=Msa0564390-mRNA-1:cds;Parent=Msa0564390-mRNA-1 |
| chr4_1 | CDS | 65059690 | 65059809 | 65059690 | ID=Msa0564390-mRNA-1:cds;Parent=Msa0564390-mRNA-1 |
| chr4_1 | CDS | 65060408 | 65060584 | 65060408 | ID=Msa0564390-mRNA-1:cds;Parent=Msa0564390-mRNA-1 |
| chr4_1 | three_prime_UTR | 65060585 | 65060825 | 65060585 | ID=Msa0564390-mRNA-1:three_prime_utr;Parent=Msa0564390-mRNA-1 |
| chr4_1 | three_prime_UTR | 65060867 | 65060894 | 65060867 | ID=Msa0564390-mRNA-1:three_prime_utr;Parent=Msa0564390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
