Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0568720 | XP_003630170.1 | 92.652 | 558 | 16 | 3 | 1 | 533 | 1 | 558 | 0.0 | 929 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0568720 | sp|Q5RC80|RBM39_PONAB | 44.648 | 383 | 172 | 14 | 156 | 522 | 133 | 491 | 3.60e-83 | 271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0568720 | G7LC87 | 92.652 | 558 | 16 | 3 | 1 | 533 | 1 | 558 | 0.0 | 929 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0568720 | Msa1237630 | 0.804035 | 2.620757e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0568720 | MtrunA17_Chr8g0383661 | 92.473 | 558 | 16 | 4 | 1 | 533 | 1 | 557 | 0.0 | 923 |
| Msa0568720 | MtrunA17_Chr3g0129451 | 78.606 | 416 | 52 | 6 | 153 | 532 | 189 | 603 | 0.0 | 661 |
| Msa0568720 | MtrunA17_Chr1g0211191 | 64.384 | 365 | 115 | 7 | 172 | 522 | 63 | 426 | 3.32e-151 | 441 |
| Msa0568720 | MtrunA17_Chr7g0259641 | 26.667 | 195 | 122 | 8 | 169 | 353 | 574 | 757 | 1.12e-12 | 70.9 |
| Msa0568720 | MtrunA17_Chr7g0267571 | 28.177 | 181 | 118 | 5 | 181 | 354 | 111 | 286 | 9.41e-12 | 66.2 |
| Msa0568720 | MtrunA17_Chr4g0058151 | 25.510 | 196 | 110 | 6 | 173 | 354 | 117 | 290 | 1.00e-11 | 66.2 |
| Msa0568720 | MtrunA17_Chr7g0260761 | 28.497 | 193 | 112 | 7 | 173 | 353 | 578 | 756 | 1.31e-11 | 67.4 |
| Msa0568720 | MtrunA17_Chr1g0153871 | 27.869 | 183 | 114 | 7 | 180 | 354 | 191 | 363 | 4.06e-11 | 65.1 |
| Msa0568720 | MtrunA17_Chr3g0121631 | 38.462 | 78 | 47 | 1 | 281 | 358 | 37 | 113 | 6.73e-11 | 60.5 |
| Msa0568720 | MtrunA17_Chr8g0344491 | 28.230 | 209 | 125 | 8 | 167 | 369 | 51 | 240 | 8.77e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0568720 | AT5G09880.1 | 61.538 | 559 | 148 | 15 | 1 | 532 | 1 | 519 | 0.0 | 578 |
| Msa0568720 | AT2G16940.2 | 49.169 | 602 | 210 | 16 | 1 | 522 | 1 | 586 | 3.30e-159 | 468 |
| Msa0568720 | AT2G16940.1 | 50.175 | 572 | 200 | 13 | 1 | 522 | 1 | 537 | 3.60e-158 | 463 |
| Msa0568720 | AT2G16940.3 | 49.916 | 593 | 208 | 17 | 1 | 522 | 1 | 575 | 1.51e-157 | 463 |
| Msa0568720 | AT2G16940.5 | 62.895 | 380 | 122 | 8 | 159 | 522 | 20 | 396 | 2.80e-153 | 445 |
| Msa0568720 | AT2G16940.4 | 62.895 | 380 | 122 | 8 | 159 | 522 | 20 | 396 | 2.80e-153 | 445 |
| Msa0568720 | AT1G48920.1 | 29.240 | 171 | 112 | 3 | 179 | 342 | 297 | 465 | 1.60e-13 | 73.6 |
| Msa0568720 | AT3G14100.1 | 28.856 | 201 | 120 | 8 | 167 | 364 | 48 | 228 | 5.15e-12 | 68.6 |
| Msa0568720 | AT3G18610.2 | 28.571 | 182 | 118 | 4 | 152 | 328 | 297 | 471 | 9.48e-12 | 68.2 |
| Msa0568720 | AT3G18610.3 | 28.571 | 182 | 118 | 4 | 152 | 328 | 327 | 501 | 1.27e-11 | 67.8 |
| Msa0568720 | AT1G54080.1 | 27.830 | 212 | 122 | 9 | 167 | 376 | 52 | 234 | 1.28e-11 | 67.4 |
| Msa0568720 | AT4G16280.3 | 30.636 | 173 | 100 | 5 | 181 | 348 | 122 | 279 | 1.69e-11 | 67.4 |
| Msa0568720 | AT3G18610.1 | 28.571 | 182 | 118 | 4 | 152 | 328 | 357 | 531 | 1.86e-11 | 67.4 |
| Msa0568720 | AT4G34110.1 | 28.743 | 167 | 102 | 4 | 180 | 344 | 37 | 188 | 2.09e-11 | 67.0 |
| Msa0568720 | AT4G16280.4 | 30.636 | 173 | 100 | 5 | 181 | 348 | 47 | 204 | 2.14e-11 | 67.0 |
| Msa0568720 | AT4G16280.2 | 30.636 | 173 | 100 | 5 | 181 | 348 | 122 | 279 | 2.16e-11 | 67.0 |
| Msa0568720 | AT2G37220.1 | 42.500 | 80 | 44 | 2 | 277 | 355 | 88 | 166 | 2.32e-11 | 65.5 |
Find 168 sgRNAs with CRISPR-Local
Find 440 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCTCTTGAGTGGGCATTTA+AGG | 0.088261 | 4_1:-70336915 | None:intergenic |
| ACAGTTCTCTGATCCCTTTC+TGG | 0.134704 | 4_1:-70333923 | None:intergenic |
| TTTATATGAAGCCAAATTTA+AGG | 0.136565 | 4_1:+70338105 | Msa0568720:CDS |
| TCAAGATTCGTCCTTAAATT+TGG | 0.179510 | 4_1:-70338116 | None:intergenic |
| ACTTGACTTGCAGGAGATTC+AGG | 0.222696 | 4_1:+70333867 | Msa0568720:intron |
| AAGGCAGCTCAGAGTTTAAA+TGG | 0.226346 | 4_1:+70335993 | Msa0568720:CDS |
| ACGGGACACTGCAAGGGTTT+TGG | 0.238665 | 4_1:+70335855 | Msa0568720:CDS |
| TCAGAGGGTTTCACCATTAC+AGG | 0.275311 | 4_1:-70335362 | None:intergenic |
| TCAGAGTTTAAATGGGAAAT+TGG | 0.278327 | 4_1:+70336001 | Msa0568720:CDS |
| GGAGAGATAAGGAGAGGGAT+AGG | 0.316456 | 4_1:+70332385 | Msa0568720:CDS |
| CGTCGTCGGCGCCGTGCTTC+CGG | 0.318437 | 4_1:-70332161 | None:intergenic |
| TTGGATGAATCCTTGTCTTC+CGG | 0.347395 | 4_1:-70332093 | None:intergenic |
| CTCTCTGGCCAACTACTTCT+CGG | 0.351599 | 4_1:+70335335 | Msa0568720:CDS |
| ATGCTAAAAGCCTGCTGAAC+AGG | 0.358990 | 4_1:-70337080 | None:intergenic |
| TTTATGTCTATATCAAAATC+TGG | 0.362952 | 4_1:-70337331 | None:intergenic |
| TCCCTTTCTGGGTCTGCCTC+AGG | 0.382400 | 4_1:-70333911 | None:intergenic |
| CAGTTCTCTGATCCCTTTCT+GGG | 0.389571 | 4_1:-70333922 | None:intergenic |
| AGAAGGACGGAGAGAGAGGT+GGG | 0.394634 | 4_1:+70332364 | Msa0568720:CDS |
| AATGGGAAATTGGAGATTGC+TGG | 0.395405 | 4_1:+70336011 | Msa0568720:CDS |
| TAAGGAAAGGGAAAAGGAAC+GGG | 0.403961 | 4_1:+70332437 | Msa0568720:CDS |
| ATTCCTACTGGTTCTGCCAC+AGG | 0.409863 | 4_1:-70337164 | None:intergenic |
| AGAGAGAAAAGGAGAGGGAG+AGG | 0.411678 | 4_1:+70332409 | Msa0568720:CDS |
| CCAATGGCAATTGCGCTCTC+TGG | 0.422721 | 4_1:+70335320 | Msa0568720:CDS |
| GATTGCTGGCAGGACTATAA+AGG | 0.425387 | 4_1:+70336025 | Msa0568720:CDS |
| TTTCTGTCCACTGCTCCATA+TGG | 0.427406 | 4_1:-70335440 | None:intergenic |
| CGCTCTCCTCTGTCTCTCTC+AGG | 0.430210 | 4_1:-70332543 | None:intergenic |
| GAGAAGGACGGAGAGAGAGG+TGG | 0.433432 | 4_1:+70332363 | Msa0568720:CDS |
| AGGGAGAAGGACGGAGAGAG+AGG | 0.434129 | 4_1:+70332360 | Msa0568720:CDS |
| TCCTACTACAGCAGCTCCAC+TGG | 0.439958 | 4_1:-70335417 | None:intergenic |
| GAGAGATAAGGAGAGGGATA+GGG | 0.440004 | 4_1:+70332386 | Msa0568720:CDS |
| AGCGTTGCTTATGCAAAGAT+TGG | 0.444504 | 4_1:+70336934 | Msa0568720:CDS |
| TACAGATCATGTTGGAAGTC+AGG | 0.450670 | 4_1:+70336151 | Msa0568720:CDS |
| GAGAGATAAGGAAAGGGAAA+AGG | 0.451992 | 4_1:+70332431 | Msa0568720:CDS |
| CCAGAGAGCGCAATTGCCAT+TGG | 0.454319 | 4_1:-70335320 | None:intergenic |
| CTTCGACGAATACGAGTACT+TGG | 0.454962 | 4_1:+70332050 | Msa0568720:CDS |
| GAGGGATAGGGAGAGAGAAA+AGG | 0.455945 | 4_1:+70332398 | Msa0568720:CDS |
| GAAGACGGTGGAGGAGCAAC+CGG | 0.456880 | 4_1:+70332074 | Msa0568720:CDS |
| CTTGACTTGCAGGAGATTCA+GGG | 0.457008 | 4_1:+70333868 | Msa0568720:intron |
| ATCTCGACGGCGGCGAAGAT+AGG | 0.458271 | 4_1:+70332184 | Msa0568720:CDS |
| TTAAATCCGAGAGGACTTAC+CGG | 0.460777 | 4_1:+70332142 | Msa0568720:CDS |
| CTTCAATAATAAACACTCGC+TGG | 0.462607 | 4_1:-70337189 | None:intergenic |
| AGAGAGAGGTGGGAGAGATA+AGG | 0.463559 | 4_1:+70332374 | Msa0568720:CDS |
| ACTTCTCGGGCAACCTGTAA+TGG | 0.467311 | 4_1:+70335349 | Msa0568720:CDS |
| ATTGGTGTGCCAACTGTGAA+TGG | 0.468260 | 4_1:+70337050 | Msa0568720:CDS |
| TCAAGACGATCTAAAGGAGT+TGG | 0.473620 | 4_1:+70334470 | Msa0568720:CDS |
| TCATCACAAACCTCGGTGCT+TGG | 0.475999 | 4_1:-70337224 | None:intergenic |
| TGAGCCATTTGGTCAGATTG+AGG | 0.478316 | 4_1:+70335806 | Msa0568720:CDS |
| GGAACGGGAGAGAAGAGATA+AGG | 0.481950 | 4_1:+70332452 | Msa0568720:CDS |
| GGTGCTCACGGTCACGTTCA+CGG | 0.482477 | 4_1:-70332275 | None:intergenic |
| ACTGGTTCTGCCACAGGGGT+AGG | 0.482776 | 4_1:-70337158 | None:intergenic |
| GGAGAGGAGAGATAAGGAAA+GGG | 0.484965 | 4_1:+70332425 | Msa0568720:CDS |
| TCCAGTGGAGCTGCTGTAGT+AGG | 0.485655 | 4_1:+70335416 | Msa0568720:CDS |
| GGAGAGGGAGAGGAGAGATA+AGG | 0.487560 | 4_1:+70332419 | Msa0568720:CDS |
| GCTGCTGTAGTAGGACCATA+TGG | 0.489254 | 4_1:+70335425 | Msa0568720:CDS |
| GGGAGAGGAGAGATAAGGAA+AGG | 0.491755 | 4_1:+70332424 | Msa0568720:CDS |
| GAGAAAGAGAGGGAGAAGGA+CGG | 0.498836 | 4_1:+70332351 | Msa0568720:intron |
| TGGGTCGGTTCCTGTTCAGC+AGG | 0.500444 | 4_1:+70337070 | Msa0568720:CDS |
| TATGAGTTCTTCTCGAAAGC+TGG | 0.501029 | 4_1:+70334109 | Msa0568720:CDS |
| CTGCCTTTGCATGTTCAAGA+TGG | 0.501167 | 4_1:-70335977 | None:intergenic |
| GAGAGATGTCCGTCTGATCA+TGG | 0.501655 | 4_1:+70334439 | Msa0568720:CDS |
| ACAACCTCAATCTGACCAAA+TGG | 0.502025 | 4_1:-70335810 | None:intergenic |
| CCTCTTGAAAGATAATGCTC+TGG | 0.505078 | 4_1:+70338161 | Msa0568720:exon |
| CAGGTTGCCCGAGAAGTAGT+TGG | 0.506510 | 4_1:-70335343 | None:intergenic |
| CACTCGCTGGGAATTCCTAC+TGG | 0.508916 | 4_1:-70337176 | None:intergenic |
| GTGCTTCCGGTAAGTCCTCT+CGG | 0.509691 | 4_1:-70332148 | None:intergenic |
| CAAGACGATCTAAAGGAGTT+GGG | 0.512572 | 4_1:+70334471 | Msa0568720:CDS |
| AGACATAAAAGAGGATGTAG+AGG | 0.512949 | 4_1:+70337345 | Msa0568720:CDS |
| GAGGAAGAGTGTTCTAAATA+CGG | 0.513774 | 4_1:+70337364 | Msa0568720:CDS |
| TTGCTTATGCAAAGATTGGC+TGG | 0.517382 | 4_1:+70336938 | Msa0568720:CDS |
| TCTCTGGCCAACTACTTCTC+GGG | 0.517772 | 4_1:+70335336 | Msa0568720:CDS |
| CGACGAGAATGGCTCTAAGA+AGG | 0.519514 | 4_1:+70332233 | Msa0568720:CDS |
| CTTCCTCTTGACATGGAGAC+GGG | 0.525930 | 4_1:+70335837 | Msa0568720:CDS |
| TTCAATAATAAACACTCGCT+GGG | 0.527139 | 4_1:-70337188 | None:intergenic |
| TAGAGAGAAAGAGAGGGAGA+AGG | 0.527732 | 4_1:+70332347 | Msa0568720:intron |
| TAAGGAGAGAGAGAAGGAAC+GGG | 0.528335 | 4_1:+70332470 | Msa0568720:CDS |
| TGCCTTTGCATGTTCAAGAT+GGG | 0.529504 | 4_1:-70335976 | None:intergenic |
| CCAGAGCATTATCTTTCAAG+AGG | 0.530679 | 4_1:-70338161 | None:intergenic |
| AAGAGTGTTCTAAATACGGC+CGG | 0.531925 | 4_1:+70337368 | Msa0568720:CDS |
| TGATGATGATGAAGGAGGAT+TGG | 0.532759 | 4_1:+70336199 | Msa0568720:CDS |
| AAATATAATGAAATAGCAAA+AGG | 0.533407 | 4_1:-70338299 | None:intergenic |
| AGGTGGGAGAGATAAGGAGA+GGG | 0.535361 | 4_1:+70332380 | Msa0568720:CDS |
| AACCTGAGGCAGACCCAGAA+AGG | 0.536328 | 4_1:+70333909 | Msa0568720:CDS |
| TTCCTACTGGTTCTGCCACA+GGG | 0.541031 | 4_1:-70337163 | None:intergenic |
| ATAAGGAAAGGGAAAAGGAA+CGG | 0.542067 | 4_1:+70332436 | Msa0568720:CDS |
| AGGCAGCTCAGAGTTTAAAT+GGG | 0.544244 | 4_1:+70335994 | Msa0568720:CDS |
| AGGAACTCAAGACGATCTAA+AGG | 0.546738 | 4_1:+70334464 | Msa0568720:CDS |
| TAGGGAGAGAGAAAAGGAGA+GGG | 0.547283 | 4_1:+70332404 | Msa0568720:CDS |
| GGACGACTCATACTCCTCCT+TGG | 0.547659 | 4_1:-70332522 | None:intergenic |
| CTCTAAGAAGGATCGCGATA+GGG | 0.547806 | 4_1:+70332245 | Msa0568720:CDS |
| CGCGGCGGAGACGACGAGAA+TGG | 0.548162 | 4_1:+70332222 | Msa0568720:CDS |
| TGCCCATCTTGAACATGCAA+AGG | 0.550622 | 4_1:+70335974 | Msa0568720:CDS |
| GCTCTAAGAAGGATCGCGAT+AGG | 0.550790 | 4_1:+70332244 | Msa0568720:CDS |
| ATAACACCTGGATTGCCAAA+AGG | 0.551187 | 4_1:-70337104 | None:intergenic |
| AAGAGATAAGGAGAGAGAGA+AGG | 0.551591 | 4_1:+70332464 | Msa0568720:CDS |
| AATCTTGAAGAAGTGCATAC+AGG | 0.553277 | 4_1:+70338131 | Msa0568720:CDS |
| GCATAAGCAACGCTCTTGAG+TGG | 0.558643 | 4_1:-70336925 | None:intergenic |
| GGAAATTGGAGATTGCTGGC+AGG | 0.559200 | 4_1:+70336015 | Msa0568720:CDS |
| ACCTGAGGCAGACCCAGAAA+GGG | 0.563699 | 4_1:+70333910 | Msa0568720:CDS |
| CATAAGCAACGCTCTTGAGT+GGG | 0.564120 | 4_1:-70336924 | None:intergenic |
| AAGAGGAGAAAGAGAGACCA+AGG | 0.566622 | 4_1:+70332505 | Msa0568720:CDS |
| GGGGTAGGCATGACTTGTGT+TGG | 0.567564 | 4_1:-70337143 | None:intergenic |
| ATTATCTTTCAAGAGGCTTG+AGG | 0.568505 | 4_1:-70338154 | None:intergenic |
| AGTGGACAGAAAATTGTATG+TGG | 0.570567 | 4_1:+70335451 | Msa0568720:CDS |
| CAGGGATAAGAAAGAGAATG+TGG | 0.571250 | 4_1:+70333886 | Msa0568720:CDS |
| CATGGAGACGGGACACTGCA+AGG | 0.573578 | 4_1:+70335848 | Msa0568720:CDS |
| ATAAGGAGAGAGAGAAGGAA+CGG | 0.573962 | 4_1:+70332469 | Msa0568720:CDS |
| GTGGACAGAAAATTGTATGT+GGG | 0.575032 | 4_1:+70335452 | Msa0568720:CDS |
| GAGGTGGGAGAGATAAGGAG+AGG | 0.579380 | 4_1:+70332379 | Msa0568720:CDS |
| AAATATCGTACAGACCTTGT+GGG | 0.582490 | 4_1:-70336971 | None:intergenic |
| ATAGGGAGAGAGAAAAGGAG+AGG | 0.583160 | 4_1:+70332403 | Msa0568720:CDS |
| GTTCTTCTCGAAAGCTGGCA+AGG | 0.584609 | 4_1:+70334114 | Msa0568720:CDS |
| AACGAGCAATGCACATGAGA+TGG | 0.585575 | 4_1:+70337594 | Msa0568720:CDS |
| GCCGCCGTCGAGATCGTCGT+CGG | 0.592650 | 4_1:-70332175 | None:intergenic |
| AATTTGGCTTCATATAAATG+TGG | 0.592878 | 4_1:-70338100 | None:intergenic |
| TTGGTGTGCCAACTGTGAAT+GGG | 0.595348 | 4_1:+70337051 | Msa0568720:CDS |
| TCGACGGCGGCGAAGATAGG+CGG | 0.595350 | 4_1:+70332187 | Msa0568720:CDS |
| TGATGCGATGTCAGTGCCAA+TGG | 0.595501 | 4_1:+70335304 | Msa0568720:CDS |
| CGAGATTTCGAAAACAGAGA+TGG | 0.596277 | 4_1:+70332564 | Msa0568720:CDS |
| TGTGTACACAGAAGAAGTGC+AGG | 0.600350 | 4_1:+70337524 | Msa0568720:intron |
| GGAGGAGCAACCGGAAGACA+AGG | 0.602697 | 4_1:+70332083 | Msa0568720:CDS |
| TATAAATTGTAATGCCCAGA+CGG | 0.605154 | 4_1:+70338222 | Msa0568720:three_prime_UTR |
| ATTTCGAAAACAGAGATGGC+AGG | 0.605883 | 4_1:+70332568 | Msa0568720:CDS |
| ACTTCCTCTTGACATGGAGA+CGG | 0.607732 | 4_1:+70335836 | Msa0568720:CDS |
| TCATCTGTTACAGATCATGT+TGG | 0.607952 | 4_1:+70336143 | Msa0568720:CDS |
| GAAAGAGAATGTGGAACCTG+AGG | 0.611571 | 4_1:+70333895 | Msa0568720:CDS |
| TGTACAACTTCCTCTTGACA+TGG | 0.615489 | 4_1:+70335830 | Msa0568720:CDS |
| GCGAAGATAGGCGGAGCAAG+AGG | 0.616111 | 4_1:+70332196 | Msa0568720:CDS |
| GAGAGGACTTACCGGAAGCA+CGG | 0.616261 | 4_1:+70332150 | Msa0568720:CDS |
| GTTCAATCTAATGCTTCCAG+TGG | 0.619478 | 4_1:+70335401 | Msa0568720:CDS |
| ATGGAGACGGGACACTGCAA+GGG | 0.619950 | 4_1:+70335849 | Msa0568720:CDS |
| GTACTTGGAGAAGACGGTGG+AGG | 0.620385 | 4_1:+70332065 | Msa0568720:CDS |
| ACTGACGCGGGTATAACACC+TGG | 0.622167 | 4_1:-70337116 | None:intergenic |
| CGACATAAATATGCAACACC+CGG | 0.623634 | 4_1:-70337387 | None:intergenic |
| ATGTCCGTCTGATCATGGAT+AGG | 0.625620 | 4_1:+70334444 | Msa0568720:CDS |
| ACAGATGCCGTTAAAAGCAA+CGG | 0.627705 | 4_1:+70334075 | Msa0568720:intron |
| GCAGACTTTGATGATGATGA+AGG | 0.629623 | 4_1:+70336191 | Msa0568720:CDS |
| AGTCGTCCTGAGAGAGACAG+AGG | 0.632776 | 4_1:+70332537 | Msa0568720:CDS |
| ACATGAGATGGTTTGCACGC+AGG | 0.634613 | 4_1:+70337606 | Msa0568720:CDS |
| GGAACCGACCCATTCACAGT+TGG | 0.635458 | 4_1:-70337059 | None:intergenic |
| AGTTCCTATCCATGATCAGA+CGG | 0.636518 | 4_1:-70334448 | None:intergenic |
| TGGACAGAAAATTGTATGTG+GGG | 0.636625 | 4_1:+70335453 | Msa0568720:CDS |
| AGAGTGTTCTAAATACGGCC+GGG | 0.637402 | 4_1:+70337369 | Msa0568720:CDS |
| TGTCCCGTCTCCATGTCAAG+AGG | 0.648903 | 4_1:-70335840 | None:intergenic |
| AGGCAACCAACCAACCTGGT+AGG | 0.658360 | 4_1:-70333951 | None:intergenic |
| AGGCGGAGCAAGAGGTCACG+CGG | 0.658613 | 4_1:+70332204 | Msa0568720:CDS |
| AGTCCTCTCGGATTTAATGT+CGG | 0.659142 | 4_1:-70332136 | None:intergenic |
| GACTTTGATGATGATGAAGG+AGG | 0.661760 | 4_1:+70336194 | Msa0568720:CDS |
| GTACTTGCAGTTTGAAACAG+TGG | 0.665993 | 4_1:+70337553 | Msa0568720:CDS |
| ATACGAGTACTTGGAGAAGA+CGG | 0.666924 | 4_1:+70332059 | Msa0568720:CDS |
| GGCGCCGACGACGATCTCGA+CGG | 0.667091 | 4_1:+70332171 | Msa0568720:CDS |
| GCCGACGACGATCTCGACGG+CGG | 0.668056 | 4_1:+70332174 | Msa0568720:CDS |
| AGTAGGACCATATGGAGCAG+TGG | 0.670759 | 4_1:+70335433 | Msa0568720:CDS |
| CTGGTACTGACATTCCCACA+AGG | 0.673381 | 4_1:+70336957 | Msa0568720:CDS |
| ACCCCTGTGGCAGAACCAGT+AGG | 0.679311 | 4_1:+70337161 | Msa0568720:CDS |
| TGTGCCAACTGTGAATGGGT+CGG | 0.685971 | 4_1:+70337055 | Msa0568720:CDS |
| TCCTACTGGTTCTGCCACAG+GGG | 0.691418 | 4_1:-70337162 | None:intergenic |
| TCTTCACTTCAACATGACTG+AGG | 0.697877 | 4_1:+70335478 | Msa0568720:CDS |
| CGAGTACTTGGAGAAGACGG+TGG | 0.704167 | 4_1:+70332062 | Msa0568720:CDS |
| AGGAGAAAGAGAGACCAAGG+AGG | 0.706516 | 4_1:+70332508 | Msa0568720:CDS |
| ACAAGTCATGCCTACCCCTG+TGG | 0.707457 | 4_1:+70337148 | Msa0568720:CDS |
| GACTGAGGCTAATCTCCGAG+AGG | 0.707679 | 4_1:+70335493 | Msa0568720:CDS |
| AAATTGTAATGCCCAGACGG+TGG | 0.709464 | 4_1:+70338225 | Msa0568720:three_prime_UTR |
| TTGTGTTGGTAGAACTGACG+CGG | 0.710439 | 4_1:-70337129 | None:intergenic |
| TGTAATGGTGAAACCCTCTG+AGG | 0.719486 | 4_1:+70335364 | Msa0568720:CDS |
| CGGAGCAAGAGGTCACGCGG+CGG | 0.728879 | 4_1:+70332207 | Msa0568720:CDS |
| TATGTTTGATCCAAGCACCG+AGG | 0.738501 | 4_1:+70337214 | Msa0568720:CDS |
| TGTGTTGGTAGAACTGACGC+GGG | 0.742830 | 4_1:-70337128 | None:intergenic |
| TCACCGACATTAAATCCGAG+AGG | 0.753568 | 4_1:+70332133 | Msa0568720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAAAAGTTTAATGTAT+TGG | + | chr4_1:70332706-70332725 | Msa0568720:intron | 10.0% |
| !!! | TTTTGTTCTTATAAAATAAG+AGG | + | chr4_1:70333426-70333445 | Msa0568720:intron | 15.0% |
| !!! | TTTCATTAATTTGTTGTTAT+TGG | + | chr4_1:70333620-70333639 | Msa0568720:intron | 15.0% |
| !!! | TTCATTAATTTGTTGTTATT+GGG | + | chr4_1:70333621-70333640 | Msa0568720:intron | 15.0% |
| !!! | CTATTTAAAACAAACAAAAA+TGG | - | chr4_1:70333977-70333996 | None:intergenic | 15.0% |
| !! | ATTATACTTTAAACAAAAGA+GGG | - | chr4_1:70334397-70334416 | None:intergenic | 15.0% |
| !! | AATTATACTTTAAACAAAAG+AGG | - | chr4_1:70334398-70334417 | None:intergenic | 15.0% |
| !! | AATATATTTAGTCAAACTAT+AGG | - | chr4_1:70335672-70335691 | None:intergenic | 15.0% |
| !!! | TAAATTTGTTTTCTTTAAAC+TGG | + | chr4_1:70335706-70335725 | Msa0568720:intron | 15.0% |
| !! | ATCAACAAAATTTAAACAAA+GGG | - | chr4_1:70336070-70336089 | None:intergenic | 15.0% |
| !! | TATCAACAAAATTTAAACAA+AGG | - | chr4_1:70336071-70336090 | None:intergenic | 15.0% |
| !! | AAATATTAGAAAATTAGTTG+TGG | + | chr4_1:70336243-70336262 | Msa0568720:intron | 15.0% |
| !! | CAAATTTACTAAAGTTTATA+CGG | + | chr4_1:70336311-70336330 | Msa0568720:intron | 15.0% |
| !!! | AACATTTTATCAAACAAAAT+AGG | - | chr4_1:70336541-70336560 | None:intergenic | 15.0% |
| !!! | TTGCAATTTTTTAATTAGTT+CGG | + | chr4_1:70337501-70337520 | Msa0568720:intron | 15.0% |
| !! | ATTGTTGAATTTAATAAAGA+GGG | - | chr4_1:70338013-70338032 | None:intergenic | 15.0% |
| !! | AAATATAATGAAATAGCAAA+AGG | - | chr4_1:70338302-70338321 | None:intergenic | 15.0% |
| !!! | TTCTCTATTGATTTTTCAAT+TGG | + | chr4_1:70332641-70332660 | Msa0568720:intron | 20.0% |
| !! | TATTAGTATTACGTAGTTAT+TGG | + | chr4_1:70332747-70332766 | Msa0568720:intron | 20.0% |
| !! | ATTAGTATTACGTAGTTATT+GGG | + | chr4_1:70332748-70332767 | Msa0568720:intron | 20.0% |
| !! | TATATGATACTAGAACATTA+TGG | + | chr4_1:70333218-70333237 | Msa0568720:intron | 20.0% |
| !!! | TTTATGAAATTTTTCTGTGT+TGG | + | chr4_1:70333348-70333367 | Msa0568720:intron | 20.0% |
| !! | AAAAAAATTGCATATAACAC+TGG | - | chr4_1:70333407-70333426 | None:intergenic | 20.0% |
| !! | AGGTATAAGTATATCATTAA+TGG | + | chr4_1:70333513-70333532 | Msa0568720:intron | 20.0% |
| !!! | TTTAAAACAAACAAAAATGG+AGG | - | chr4_1:70333974-70333993 | None:intergenic | 20.0% |
| !! | TTATACTTTAAACAAAAGAG+GGG | - | chr4_1:70334396-70334415 | None:intergenic | 20.0% |
| !! | ATTGTATGCTTGAAAAAAAT+GGG | - | chr4_1:70334721-70334740 | None:intergenic | 20.0% |
| !!! | AGATTGAACAAGATTTTTTT+CGG | - | chr4_1:70335390-70335409 | None:intergenic | 20.0% |
| !! | TCAACAAAATTTAAACAAAG+GGG | - | chr4_1:70336069-70336088 | None:intergenic | 20.0% |
| !! | TTCTAGATATGAAATTATAC+AGG | + | chr4_1:70336420-70336439 | Msa0568720:intron | 20.0% |
| !! | AGGTTACATGTAAATATATA+AGG | + | chr4_1:70336514-70336533 | Msa0568720:intron | 20.0% |
| !! | GGTTACATGTAAATATATAA+GGG | + | chr4_1:70336515-70336534 | Msa0568720:intron | 20.0% |
| !!! | AAACATTTCTTTTGTTGTTT+CGG | - | chr4_1:70336594-70336613 | None:intergenic | 20.0% |
| !!! | AACAACAAAAGAAATGTTTT+TGG | + | chr4_1:70336595-70336614 | Msa0568720:intron | 20.0% |
| !! | TTTATGTCTATATCAAAATC+TGG | - | chr4_1:70337334-70337353 | None:intergenic | 20.0% |
| !!! | TTTTGATATAGACATAAAAG+AGG | + | chr4_1:70337336-70337355 | Msa0568720:CDS | 20.0% |
| !! | GATTGTTGAATTTAATAAAG+AGG | - | chr4_1:70338014-70338033 | None:intergenic | 20.0% |
| !! | TTTATATGAAGCCAAATTTA+AGG | + | chr4_1:70338105-70338124 | Msa0568720:CDS | 20.0% |
| ! | GAAAACAACATGAAATGAAA+AGG | - | chr4_1:70332624-70332643 | None:intergenic | 25.0% |
| ! | ATTTCTAATTCAATCATGTC+TGG | - | chr4_1:70332856-70332875 | None:intergenic | 25.0% |
| ! | ATGACAATATTATAGAGAGT+TGG | + | chr4_1:70332874-70332893 | Msa0568720:intron | 25.0% |
| ! | TGACAATATTATAGAGAGTT+GGG | + | chr4_1:70332875-70332894 | Msa0568720:intron | 25.0% |
| ! | ATCTCTAGATCATTCTTAAT+CGG | - | chr4_1:70333175-70333194 | None:intergenic | 25.0% |
| ! | CATTGTATGCTTGAAAAAAA+TGG | - | chr4_1:70334722-70334741 | None:intergenic | 25.0% |
| ! | TCATAAAAGAAGGAAAAGAT+GGG | - | chr4_1:70334805-70334824 | None:intergenic | 25.0% |
| ! | TTCATAAAAGAAGGAAAAGA+TGG | - | chr4_1:70334806-70334825 | None:intergenic | 25.0% |
| ! | GACTTACAATTCATAAAAGA+AGG | - | chr4_1:70334815-70334834 | None:intergenic | 25.0% |
| !! | TAAAATTTTGCTAATGCACT+AGG | - | chr4_1:70334923-70334942 | None:intergenic | 25.0% |
| !!! | TTTAGTGCAGTTTATTTTGT+TGG | + | chr4_1:70334939-70334958 | Msa0568720:intron | 25.0% |
| !!! | TTTGTTTTCTTTAAACTGGT+AGG | + | chr4_1:70335710-70335729 | Msa0568720:intron | 25.0% |
| !!! | TTTTAGATTTTTGAGCCATT+TGG | + | chr4_1:70335795-70335814 | Msa0568720:intron | 25.0% |
| ! | TATTTCTTAAGGTTAAAGGT+TGG | - | chr4_1:70335899-70335918 | None:intergenic | 25.0% |
| ! | GCAATATTTCTTAAGGTTAA+AGG | - | chr4_1:70335903-70335922 | None:intergenic | 25.0% |
| ! | GTGAAAAGCAATATTTCTTA+AGG | - | chr4_1:70335910-70335929 | None:intergenic | 25.0% |
| !!! | TCACTTTAACTTGTATTCAT+TGG | + | chr4_1:70335945-70335964 | Msa0568720:intron | 25.0% |
| ! | TTGATTGCATATATTTGTAG+AGG | - | chr4_1:70336626-70336645 | None:intergenic | 25.0% |
| ! | TAACAATAGTACTCATCTAT+TGG | + | chr4_1:70336808-70336827 | Msa0568720:intron | 25.0% |
| ! | AACAATAGTACTCATCTATT+GGG | + | chr4_1:70336809-70336828 | Msa0568720:intron | 25.0% |
| !!! | ACATTAGTTTTTCTTCTGTA+CGG | + | chr4_1:70336859-70336878 | Msa0568720:intron | 25.0% |
| ! | CAGGTTCATAAAAATATAAG+AGG | - | chr4_1:70336998-70337017 | None:intergenic | 25.0% |
| ! | AATATGTGAAAACAATGAAC+AGG | - | chr4_1:70337017-70337036 | None:intergenic | 25.0% |
| ! | AAATTGCAACACATAATATG+TGG | - | chr4_1:70337490-70337509 | None:intergenic | 25.0% |
| ! | TTGAATTTAATAAAGAGGGA+CGG | - | chr4_1:70338009-70338028 | None:intergenic | 25.0% |
| ! | AAGATATTGATCTAGAGAAA+AGG | - | chr4_1:70338056-70338075 | None:intergenic | 25.0% |
| !! | AATTTGGCTTCATATAAATG+TGG | - | chr4_1:70338103-70338122 | None:intergenic | 25.0% |
| !!! | ACCTTGTTTAACTTTTTGTT+TGG | + | chr4_1:70338337-70338356 | Msa0568720:three_prime_UTR | 25.0% |
| ! | TCCAAACAAAAAGTTAAACA+AGG | - | chr4_1:70338341-70338360 | None:intergenic | 25.0% |
| !!! | TGTTTAACTTTTTGTTTGGA+AGG | + | chr4_1:70338341-70338360 | Msa0568720:three_prime_UTR | 25.0% |
| AGAGTAAAATAAGAGAAGCA+GGG | + | chr4_1:70332802-70332821 | Msa0568720:intron | 30.0% | |
| GACAATATTATAGAGAGTTG+GGG | + | chr4_1:70332876-70332895 | Msa0568720:intron | 30.0% | |
| AATGCCTATTGTAGAAAAGA+TGG | + | chr4_1:70332900-70332919 | Msa0568720:intron | 30.0% | |
| ! | TCTACCATCTTTTCTACAAT+AGG | - | chr4_1:70332907-70332926 | None:intergenic | 30.0% |
| GTGAGTATGTTAATTGTTCT+GGG | - | chr4_1:70333073-70333092 | None:intergenic | 30.0% | |
| TGTGAGTATGTTAATTGTTC+TGG | - | chr4_1:70333074-70333093 | None:intergenic | 30.0% | |
| TGATCTAGAGATTAATGAGT+TGG | + | chr4_1:70333183-70333202 | Msa0568720:intron | 30.0% | |
| ! | TAGAGATTAATGAGTTGGAT+AGG | + | chr4_1:70333188-70333207 | Msa0568720:intron | 30.0% |
| ! | AGAGATTAATGAGTTGGATA+GGG | + | chr4_1:70333189-70333208 | Msa0568720:intron | 30.0% |
| ! | AATTTTTCTGTGTTGGAATG+TGG | + | chr4_1:70333355-70333374 | Msa0568720:intron | 30.0% |
| TTGAAATGTGATGCTAAACT+AGG | + | chr4_1:70333449-70333468 | Msa0568720:intron | 30.0% | |
| ACCAAACAGCAACTAATTAA+TGG | - | chr4_1:70333482-70333501 | None:intergenic | 30.0% | |
| !! | TAATCTGGGTTGATCTAAAA+AGG | + | chr4_1:70333589-70333608 | Msa0568720:intron | 30.0% |
| CATGTCATACTAGTTGAATT+TGG | - | chr4_1:70333811-70333830 | None:intergenic | 30.0% | |
| CAAATTCAACTAGTATGACA+TGG | + | chr4_1:70333809-70333828 | Msa0568720:intron | 30.0% | |
| ! | ATTTATACGGTCTGAGATAT+TGG | + | chr4_1:70334002-70334021 | Msa0568720:intron | 30.0% |
| ACTCTGCTTTCAGTTAAATA+GGG | + | chr4_1:70334222-70334241 | Msa0568720:intron | 30.0% | |
| ! | ATTTGATGTTCCATGTTTTC+AGG | + | chr4_1:70334415-70334434 | Msa0568720:intron | 30.0% |
| ! | GTGAGCTAATTAAAGCATTA+GGG | - | chr4_1:70334646-70334665 | None:intergenic | 30.0% |
| ! | AGTGAGCTAATTAAAGCATT+AGG | - | chr4_1:70334647-70334666 | None:intergenic | 30.0% |
| TGCTTGAAAAAAATGGGAAT+AGG | - | chr4_1:70334715-70334734 | None:intergenic | 30.0% | |
| CATAAAAGAAGGAAAAGATG+GGG | - | chr4_1:70334804-70334823 | None:intergenic | 30.0% | |
| AAGCTGAGTTTCATTATGTA+AGG | - | chr4_1:70335149-70335168 | None:intergenic | 30.0% | |
| CACACATATATATACACACA+CGG | - | chr4_1:70335600-70335619 | None:intergenic | 30.0% | |
| TATCACGACAAGATTCTAAT+CGG | - | chr4_1:70335742-70335761 | None:intergenic | 30.0% | |
| TCAGAGTTTAAATGGGAAAT+TGG | + | chr4_1:70336001-70336020 | Msa0568720:CDS | 30.0% | |
| AGTGTTCATGTTTGATAGAT+AGG | + | chr4_1:70336454-70336473 | Msa0568720:intron | 30.0% | |
| GATCTTGGAAAGAAAAACTA+AGG | - | chr4_1:70336727-70336746 | None:intergenic | 30.0% | |
| AAAAACAAAGCCAACAGAAA+GGG | - | chr4_1:70336779-70336798 | None:intergenic | 30.0% | |
| AAAAAACAAAGCCAACAGAA+AGG | - | chr4_1:70336780-70336799 | None:intergenic | 30.0% | |
| ACAATAGTACTCATCTATTG+GGG | + | chr4_1:70336810-70336829 | Msa0568720:intron | 30.0% | |
| TTCAATAATAAACACTCGCT+GGG | - | chr4_1:70337191-70337210 | None:intergenic | 30.0% | |
| AATCAATTCATCACAAACCT+CGG | - | chr4_1:70337234-70337253 | None:intergenic | 30.0% | |
| ! | TCTGAAACATCATATGGTTA+TGG | - | chr4_1:70337269-70337288 | None:intergenic | 30.0% |
| ! | TCGTTATCTGAAACATCATA+TGG | - | chr4_1:70337275-70337294 | None:intergenic | 30.0% |
| AATATTCTTGAGTTCTCTGT+TGG | + | chr4_1:70337660-70337679 | Msa0568720:intron | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | - | chr4_1:70337738-70337757 | None:intergenic | 30.0% | |
| !!! | ACCTTGTTTTTCTCACTTAT+TGG | + | chr4_1:70337760-70337779 | Msa0568720:intron | 30.0% |
| ACCAATAAGTGAGAAAAACA+AGG | - | chr4_1:70337764-70337783 | None:intergenic | 30.0% | |
| CACTTATTGGTCAAAAACAA+TGG | + | chr4_1:70337773-70337792 | Msa0568720:intron | 30.0% | |
| AAAACAATGGAGAGAGAAAA+AGG | + | chr4_1:70337786-70337805 | Msa0568720:intron | 30.0% | |
| !!! | AACCACTTTTTGACAACTTT+TGG | - | chr4_1:70337858-70337877 | None:intergenic | 30.0% |
| GTAGTGTGATTAATCATACA+TGG | - | chr4_1:70337955-70337974 | None:intergenic | 30.0% | |
| AACACATCAGAATGATAATC+TGG | - | chr4_1:70337984-70338003 | None:intergenic | 30.0% | |
| TCAAGATTCGTCCTTAAATT+TGG | - | chr4_1:70338119-70338138 | None:intergenic | 30.0% | |
| TATAAATTGTAATGCCCAGA+CGG | + | chr4_1:70338222-70338241 | Msa0568720:three_prime_UTR | 30.0% | |
| !! | CTTTTTGTTTGGAAGGTTTT+TGG | + | chr4_1:70338348-70338367 | Msa0568720:three_prime_UTR | 30.0% |
| ! | GATGTCAGTGTTCTTCTTTT+TGG | - | chr4_1:70332115-70332134 | None:intergenic | 35.0% |
| ATAAGGAAAGGGAAAAGGAA+CGG | + | chr4_1:70332436-70332455 | Msa0568720:CDS | 35.0% | |
| GTATTACGTAGTTATTGGGA+TGG | + | chr4_1:70332752-70332771 | Msa0568720:intron | 35.0% | |
| GAGAGTAAAATAAGAGAAGC+AGG | + | chr4_1:70332801-70332820 | Msa0568720:intron | 35.0% | |
| ! | ATGAGAATTTTGTGGATGTG+TGG | + | chr4_1:70332825-70332844 | Msa0568720:intron | 35.0% |
| AAGAAGAGTAGATCAGATGT+AGG | + | chr4_1:70332985-70333004 | Msa0568720:intron | 35.0% | |
| AGAAGAGTAGATCAGATGTA+GGG | + | chr4_1:70332986-70333005 | Msa0568720:intron | 35.0% | |
| ACAACAACCAATCCTAAGTA+GGG | - | chr4_1:70333267-70333286 | None:intergenic | 35.0% | |
| AACAACAACCAATCCTAAGT+AGG | - | chr4_1:70333268-70333287 | None:intergenic | 35.0% | |
| CACTGGCAACATAAACAATA+GGG | - | chr4_1:70333390-70333409 | None:intergenic | 35.0% | |
| ACACTGGCAACATAAACAAT+AGG | - | chr4_1:70333391-70333410 | None:intergenic | 35.0% | |
| ! | GCCATTAATTAGTTGCTGTT+TGG | + | chr4_1:70333478-70333497 | Msa0568720:intron | 35.0% |
| ! | CTGTTTGGTTCAATTCTTCA+AGG | + | chr4_1:70333493-70333512 | Msa0568720:intron | 35.0% |
| ! | TATGATCCTTACTGCAGTTT+TGG | + | chr4_1:70333669-70333688 | Msa0568720:intron | 35.0% |
| GTCCATATTAGAGTCCAAAT+TGG | - | chr4_1:70333745-70333764 | None:intergenic | 35.0% | |
| CTGCAAGTCAAGTTAAAATG+AGG | - | chr4_1:70333860-70333879 | None:intergenic | 35.0% | |
| !!! | CTCATTTTAACTTGACTTGC+AGG | + | chr4_1:70333858-70333877 | Msa0568720:intron | 35.0% |
| ATGATTTCCTGTTTGCTCTT+TGG | + | chr4_1:70334047-70334066 | Msa0568720:intron | 35.0% | |
| CACTCTGCTTTCAGTTAAAT+AGG | + | chr4_1:70334221-70334240 | Msa0568720:intron | 35.0% | |
| TGCTTGACTGTATTCTTGAT+TGG | + | chr4_1:70334578-70334597 | Msa0568720:intron | 35.0% | |
| AAATGGGAATAGGACTGAAA+AGG | - | chr4_1:70334705-70334724 | None:intergenic | 35.0% | |
| AGGTTTGATGCTCATGAATT+TGG | + | chr4_1:70334851-70334870 | Msa0568720:intron | 35.0% | |
| ACTTTCATTTGACCAGTAGT+GGG | + | chr4_1:70334883-70334902 | Msa0568720:intron | 35.0% | |
| ACCATTTAGACAAGAAGGAT+TGG | - | chr4_1:70335017-70335036 | None:intergenic | 35.0% | |
| TTCGTATGAGTACAGAGATA+CGG | - | chr4_1:70335041-70335060 | None:intergenic | 35.0% | |
| GAATACAGCAAAGAGATGTA+GGG | - | chr4_1:70335199-70335218 | None:intergenic | 35.0% | |
| AGAATACAGCAAAGAGATGT+AGG | - | chr4_1:70335200-70335219 | None:intergenic | 35.0% | |
| AGTGGACAGAAAATTGTATG+TGG | + | chr4_1:70335451-70335470 | Msa0568720:CDS | 35.0% | |
| GTGGACAGAAAATTGTATGT+GGG | + | chr4_1:70335452-70335471 | Msa0568720:CDS | 35.0% | |
| TGGACAGAAAATTGTATGTG+GGG | + | chr4_1:70335453-70335472 | Msa0568720:CDS | 35.0% | |
| AAACATTGATATCCTCACCA+CGG | - | chr4_1:70335568-70335587 | None:intergenic | 35.0% | |
| GAACGTCAGTAACAAACAAA+TGG | - | chr4_1:70336109-70336128 | None:intergenic | 35.0% | |
| TCATCTGTTACAGATCATGT+TGG | + | chr4_1:70336143-70336162 | Msa0568720:CDS | 35.0% | |
| ! | TTGAAATTTCAGTGCTGTTG+AGG | + | chr4_1:70336481-70336500 | Msa0568720:intron | 35.0% |
| AAAACAAAGCCAACAGAAAG+GGG | - | chr4_1:70336778-70336797 | None:intergenic | 35.0% | |
| !! | GGGAAGTTATTGTTTGTTGT+TGG | + | chr4_1:70336830-70336849 | Msa0568720:intron | 35.0% |
| AAATATCGTACAGACCTTGT+GGG | - | chr4_1:70336974-70336993 | None:intergenic | 35.0% | |
| AAAATATCGTACAGACCTTG+TGG | - | chr4_1:70336975-70336994 | None:intergenic | 35.0% | |
| CTTCAATAATAAACACTCGC+TGG | - | chr4_1:70337192-70337211 | None:intergenic | 35.0% | |
| AGACATAAAAGAGGATGTAG+AGG | + | chr4_1:70337345-70337364 | Msa0568720:CDS | 35.0% | |
| !! | GAGGAAGAGTGTTCTAAATA+CGG | + | chr4_1:70337364-70337383 | Msa0568720:CDS | 35.0% |
| ! | CTGTGTCCTTTTCATGTTAT+CGG | + | chr4_1:70337461-70337480 | Msa0568720:intron | 35.0% |
| TGGAAACCGATAACATGAAA+AGG | - | chr4_1:70337470-70337489 | None:intergenic | 35.0% | |
| GTCCAAAAGTTGTCAAAAAG+TGG | + | chr4_1:70337853-70337872 | Msa0568720:intron | 35.0% | |
| ! | CAGAATGATAATCTGGTTCA+TGG | - | chr4_1:70337977-70337996 | None:intergenic | 35.0% |
| ! | AATCTTGAAGAAGTGCATAC+AGG | + | chr4_1:70338131-70338150 | Msa0568720:CDS | 35.0% |
| ATTATCTTTCAAGAGGCTTG+AGG | - | chr4_1:70338157-70338176 | None:intergenic | 35.0% | |
| ATACGAGTACTTGGAGAAGA+CGG | + | chr4_1:70332059-70332078 | Msa0568720:CDS | 40.0% | |
| TTGGATGAATCCTTGTCTTC+CGG | - | chr4_1:70332096-70332115 | None:intergenic | 40.0% | |
| AGTCCTCTCGGATTTAATGT+CGG | - | chr4_1:70332139-70332158 | None:intergenic | 40.0% | |
| TTAAATCCGAGAGGACTTAC+CGG | + | chr4_1:70332142-70332161 | Msa0568720:CDS | 40.0% | |
| AGGTAGTAGAGAGAAAGAGA+GGG | + | chr4_1:70332341-70332360 | Msa0568720:intron | 40.0% | |
| GAGAGATAAGGAAAGGGAAA+AGG | + | chr4_1:70332431-70332450 | Msa0568720:CDS | 40.0% | |
| TAAGGAAAGGGAAAAGGAAC+GGG | + | chr4_1:70332437-70332456 | Msa0568720:CDS | 40.0% | |
| AAGAGATAAGGAGAGAGAGA+AGG | + | chr4_1:70332464-70332483 | Msa0568720:CDS | 40.0% | |
| ATAAGGAGAGAGAGAAGGAA+CGG | + | chr4_1:70332469-70332488 | Msa0568720:CDS | 40.0% | |
| CGAGATTTCGAAAACAGAGA+TGG | + | chr4_1:70332564-70332583 | Msa0568720:CDS | 40.0% | |
| ATTTCGAAAACAGAGATGGC+AGG | + | chr4_1:70332568-70332587 | Msa0568720:CDS | 40.0% | |
| TAGTTATTGGGATGGAGTGT+TGG | + | chr4_1:70332760-70332779 | Msa0568720:intron | 40.0% | |
| ! | AAGCAGGGATGAGAATTTTG+TGG | + | chr4_1:70332817-70332836 | Msa0568720:intron | 40.0% |
| AGATGGTAGAAACTCAGCTT+AGG | + | chr4_1:70332917-70332936 | Msa0568720:intron | 40.0% | |
| CAGAGTTCGAATCTTGGTTA+GGG | + | chr4_1:70333036-70333055 | Msa0568720:intron | 40.0% | |
| CAGAGTAGTCAAATCACTAG+AGG | + | chr4_1:70333130-70333149 | Msa0568720:intron | 40.0% | |
| TAGTCAAATCACTAGAGGCA+AGG | + | chr4_1:70333135-70333154 | Msa0568720:intron | 40.0% | |
| AGTCAAATCACTAGAGGCAA+GGG | + | chr4_1:70333136-70333155 | Msa0568720:intron | 40.0% | |
| TAGATCAACCCAGATTATCC+TGG | - | chr4_1:70333586-70333605 | None:intergenic | 40.0% | |
| ATTGGGTTTCAATGCTAGCA+CGG | + | chr4_1:70333638-70333657 | Msa0568720:intron | 40.0% | |
| !!! | TGCAGTTTTGGCTCATGTAT+AGG | + | chr4_1:70333681-70333700 | Msa0568720:intron | 40.0% |
| CGCCAATTTGGACTCTAATA+TGG | + | chr4_1:70333740-70333759 | Msa0568720:intron | 40.0% | |
| CAGGGATAAGAAAGAGAATG+TGG | + | chr4_1:70333886-70333905 | Msa0568720:CDS | 40.0% | |
| ACAGATGCCGTTAAAAGCAA+CGG | + | chr4_1:70334075-70334094 | Msa0568720:intron | 40.0% | |
| !!! | TCTCTCTCCGTTGCTTTTAA+CGG | - | chr4_1:70334085-70334104 | None:intergenic | 40.0% |
| TATGAGTTCTTCTCGAAAGC+TGG | + | chr4_1:70334109-70334128 | Msa0568720:CDS | 40.0% | |
| !! | GGCTGCTACTTTATTGTGTA+TGG | + | chr4_1:70334243-70334262 | Msa0568720:intron | 40.0% |
| TTGCCACGTTCCTACAAATA+AGG | + | chr4_1:70334319-70334338 | Msa0568720:intron | 40.0% | |
| TGCCACGTTCCTACAAATAA+GGG | + | chr4_1:70334320-70334339 | Msa0568720:intron | 40.0% | |
| !! | AGGGGAAGTATCATGTATAG+AGG | - | chr4_1:70334378-70334397 | None:intergenic | 40.0% |
| ACATCTCTCACCTGAAAACA+TGG | - | chr4_1:70334428-70334447 | None:intergenic | 40.0% | |
| AGTTCCTATCCATGATCAGA+CGG | - | chr4_1:70334451-70334470 | None:intergenic | 40.0% | |
| AGGAACTCAAGACGATCTAA+AGG | + | chr4_1:70334464-70334483 | Msa0568720:CDS | 40.0% | |
| TCAAGACGATCTAAAGGAGT+TGG | + | chr4_1:70334470-70334489 | Msa0568720:CDS | 40.0% | |
| CAAGACGATCTAAAGGAGTT+GGG | + | chr4_1:70334471-70334490 | Msa0568720:CDS | 40.0% | |
| GAAGATCGATGACATAGTCT+TGG | + | chr4_1:70334676-70334695 | Msa0568720:intron | 40.0% | |
| AAAAGAAGGAAAAGATGGGG+TGG | - | chr4_1:70334801-70334820 | None:intergenic | 40.0% | |
| GAATTGTAAGTCTCTCACGT+TGG | + | chr4_1:70334823-70334842 | Msa0568720:intron | 40.0% | |
| GACTTTCATTTGACCAGTAG+TGG | + | chr4_1:70334882-70334901 | Msa0568720:intron | 40.0% | |
| ! | ACATTTTTGCAACGGATGCA+AGG | + | chr4_1:70334983-70335002 | Msa0568720:intron | 40.0% |
| GCCAATCCTTCTTGTCTAAA+TGG | + | chr4_1:70335013-70335032 | Msa0568720:intron | 40.0% | |
| ACGGAACCATTTAGACAAGA+AGG | - | chr4_1:70335022-70335041 | None:intergenic | 40.0% | |
| ATGCAAGTTCTTTATGCTGC+AGG | + | chr4_1:70335267-70335286 | Msa0568720:intron | 40.0% | |
| !!! | AGATTTTTTTCGGCCTCAGA+GGG | - | chr4_1:70335380-70335399 | None:intergenic | 40.0% |
| !!! | AAGATTTTTTTCGGCCTCAG+AGG | - | chr4_1:70335381-70335400 | None:intergenic | 40.0% |
| GTTCAATCTAATGCTTCCAG+TGG | + | chr4_1:70335401-70335420 | Msa0568720:CDS | 40.0% | |
| TCTTCACTTCAACATGACTG+AGG | + | chr4_1:70335478-70335497 | Msa0568720:CDS | 40.0% | |
| ATACACGCACAAATACCTCT+CGG | - | chr4_1:70335511-70335530 | None:intergenic | 40.0% | |
| TGTGTGTGTGTGTTAACTGA+GGG | + | chr4_1:70335616-70335635 | Msa0568720:intron | 40.0% | |
| ACAACCTCAATCTGACCAAA+TGG | - | chr4_1:70335813-70335832 | None:intergenic | 40.0% | |
| TGTACAACTTCCTCTTGACA+TGG | + | chr4_1:70335830-70335849 | Msa0568720:CDS | 40.0% | |
| TGCCTTTGCATGTTCAAGAT+GGG | - | chr4_1:70335979-70335998 | None:intergenic | 40.0% | |
| AAGGCAGCTCAGAGTTTAAA+TGG | + | chr4_1:70335993-70336012 | Msa0568720:CDS | 40.0% | |
| AGGCAGCTCAGAGTTTAAAT+GGG | + | chr4_1:70335994-70336013 | Msa0568720:CDS | 40.0% | |
| AATGGGAAATTGGAGATTGC+TGG | + | chr4_1:70336011-70336030 | Msa0568720:CDS | 40.0% | |
| TACTGACGTTCGTCAAATTC+AGG | + | chr4_1:70336118-70336137 | Msa0568720:intron | 40.0% | |
| TACAGATCATGTTGGAAGTC+AGG | + | chr4_1:70336151-70336170 | Msa0568720:CDS | 40.0% | |
| !! | GCAGACTTTGATGATGATGA+AGG | + | chr4_1:70336191-70336210 | Msa0568720:CDS | 40.0% |
| !! | GACTTTGATGATGATGAAGG+AGG | + | chr4_1:70336194-70336213 | Msa0568720:CDS | 40.0% |
| ! | TGATGATGATGAAGGAGGAT+TGG | + | chr4_1:70336199-70336218 | Msa0568720:CDS | 40.0% |
| TTGTTAGAAACCTGAACGAC+AGG | + | chr4_1:70336349-70336368 | Msa0568720:intron | 40.0% | |
| TGTTAGAAACCTGAACGACA+GGG | + | chr4_1:70336350-70336369 | Msa0568720:intron | 40.0% | |
| !!! | TGTTTTTGAGACCAACCAAC+CGG | + | chr4_1:70336699-70336718 | Msa0568720:intron | 40.0% |
| GGAAAGAAAAACTAAGGACC+CGG | - | chr4_1:70336721-70336740 | None:intergenic | 40.0% | |
| AGTGCGGTGATAAAAGATCT+TGG | - | chr4_1:70336742-70336761 | None:intergenic | 40.0% | |
| AGCGTTGCTTATGCAAAGAT+TGG | + | chr4_1:70336934-70336953 | Msa0568720:CDS | 40.0% | |
| TTGCTTATGCAAAGATTGGC+TGG | + | chr4_1:70336938-70336957 | Msa0568720:CDS | 40.0% | |
| ATATTTCCCAACTGCAGCAT+TGG | + | chr4_1:70337032-70337051 | Msa0568720:intron | 40.0% | |
| ATAACACCTGGATTGCCAAA+AGG | - | chr4_1:70337107-70337126 | None:intergenic | 40.0% | |
| !! | AAGAGTGTTCTAAATACGGC+CGG | + | chr4_1:70337368-70337387 | Msa0568720:CDS | 40.0% |
| CGACATAAATATGCAACACC+CGG | - | chr4_1:70337390-70337409 | None:intergenic | 40.0% | |
| ACATGAAAAGGACACAGCAA+AGG | - | chr4_1:70337458-70337477 | None:intergenic | 40.0% | |
| ! | GTACTTGCAGTTTGAAACAG+TGG | + | chr4_1:70337553-70337572 | Msa0568720:CDS | 40.0% |
| GTTGATCACAGCTATCTTCA+TGG | + | chr4_1:70337628-70337647 | Msa0568720:intron | 40.0% | |
| AGGTTTGCAGCATAACATCA+GGG | - | chr4_1:70338036-70338055 | None:intergenic | 40.0% | |
| AAGGTTTGCAGCATAACATC+AGG | - | chr4_1:70338037-70338056 | None:intergenic | 40.0% | |
| ! | CCAGAGCATTATCTTTCAAG+AGG | - | chr4_1:70338164-70338183 | None:intergenic | 40.0% |
| CCTCTTGAAAGATAATGCTC+TGG | + | chr4_1:70338161-70338180 | Msa0568720:exon | 40.0% | |
| CTTCGACGAATACGAGTACT+TGG | + | chr4_1:70332050-70332069 | Msa0568720:CDS | 45.0% | |
| TCACCGACATTAAATCCGAG+AGG | + | chr4_1:70332133-70332152 | Msa0568720:CDS | 45.0% | |
| ! | CTCTAAGAAGGATCGCGATA+GGG | + | chr4_1:70332245-70332264 | Msa0568720:CDS | 45.0% |
| GAGGTAGTAGAGAGAAAGAG+AGG | + | chr4_1:70332340-70332359 | Msa0568720:intron | 45.0% | |
| TAGAGAGAAAGAGAGGGAGA+AGG | + | chr4_1:70332347-70332366 | Msa0568720:intron | 45.0% | |
| GAGAGATAAGGAGAGGGATA+GGG | + | chr4_1:70332386-70332405 | Msa0568720:CDS | 45.0% | |
| ATAGGGAGAGAGAAAAGGAG+AGG | + | chr4_1:70332403-70332422 | Msa0568720:CDS | 45.0% | |
| TAGGGAGAGAGAAAAGGAGA+GGG | + | chr4_1:70332404-70332423 | Msa0568720:CDS | 45.0% | |
| GGAGAGGAGAGATAAGGAAA+GGG | + | chr4_1:70332425-70332444 | Msa0568720:CDS | 45.0% | |
| TAAGGAGAGAGAGAAGGAAC+GGG | + | chr4_1:70332470-70332489 | Msa0568720:CDS | 45.0% | |
| AAGAGGAGAAAGAGAGACCA+AGG | + | chr4_1:70332505-70332524 | Msa0568720:CDS | 45.0% | |
| !! | TATTGGGATGGAGTGTTGGA+AGG | + | chr4_1:70332764-70332783 | Msa0568720:intron | 45.0% |
| TGGTAGAAACTCAGCTTAGG+TGG | + | chr4_1:70332920-70332939 | Msa0568720:intron | 45.0% | |
| GAAACTCAGCTTAGGTGGTT+CGG | + | chr4_1:70332925-70332944 | Msa0568720:intron | 45.0% | |
| GTAGGGATGTGTAACTCACT+TGG | + | chr4_1:70333003-70333022 | Msa0568720:intron | 45.0% | |
| CCTAACCAAGATTCGAACTC+TGG | - | chr4_1:70333038-70333057 | None:intergenic | 45.0% | |
| CCAGAGTTCGAATCTTGGTT+AGG | + | chr4_1:70333035-70333054 | Msa0568720:intron | 45.0% | |
| TAGCCAACCCTACTTAGGAT+TGG | + | chr4_1:70333257-70333276 | Msa0568720:intron | 45.0% | |
| CAACCAATCCTAAGTAGGGT+TGG | - | chr4_1:70333263-70333282 | None:intergenic | 45.0% | |
| ATTATCCTGGTATCCCTGGT+CGG | - | chr4_1:70333573-70333592 | None:intergenic | 45.0% | |
| CAGGGATACCAGGATAATCT+GGG | + | chr4_1:70333575-70333594 | Msa0568720:intron | 45.0% | |
| CATGAGCCAAAACTGCAGTA+AGG | - | chr4_1:70333678-70333697 | None:intergenic | 45.0% | |
| !! | ACTTGACTTGCAGGAGATTC+AGG | + | chr4_1:70333867-70333886 | Msa0568720:intron | 45.0% |
| !! | CTTGACTTGCAGGAGATTCA+GGG | + | chr4_1:70333868-70333887 | Msa0568720:intron | 45.0% |
| GAAAGAGAATGTGGAACCTG+AGG | + | chr4_1:70333895-70333914 | Msa0568720:CDS | 45.0% | |
| CAGTTCTCTGATCCCTTTCT+GGG | - | chr4_1:70333925-70333944 | None:intergenic | 45.0% | |
| ACAGTTCTCTGATCCCTTTC+TGG | - | chr4_1:70333926-70333945 | None:intergenic | 45.0% | |
| !!! | GAGAACTGTTTTTGCCTACC+AGG | + | chr4_1:70333937-70333956 | Msa0568720:CDS | 45.0% |
| !!! | ACTGTTTTTGCCTACCAGGT+TGG | + | chr4_1:70333941-70333960 | Msa0568720:intron | 45.0% |
| !!! | TTTTTGCCTACCAGGTTGGT+TGG | + | chr4_1:70333945-70333964 | Msa0568720:intron | 45.0% |
| GTGAACACCAAAGAGCAAAC+AGG | - | chr4_1:70334057-70334076 | None:intergenic | 45.0% | |
| GCCACGTTCCTACAAATAAG+GGG | + | chr4_1:70334321-70334340 | Msa0568720:intron | 45.0% | |
| CCACGTTCCTACAAATAAGG+GGG | + | chr4_1:70334322-70334341 | Msa0568720:intron | 45.0% | |
| GGCAGATGTAAGCATTCACT+GGG | - | chr4_1:70334357-70334376 | None:intergenic | 45.0% | |
| AGGCAGATGTAAGCATTCAC+TGG | - | chr4_1:70334358-70334377 | None:intergenic | 45.0% | |
| ATGTCCGTCTGATCATGGAT+AGG | + | chr4_1:70334444-70334463 | Msa0568720:CDS | 45.0% | |
| TTAGCCATGCCATAGTGATG+AGG | + | chr4_1:70334602-70334621 | Msa0568720:intron | 45.0% | |
| CATTCCTCATCACTATGGCA+TGG | - | chr4_1:70334609-70334628 | None:intergenic | 45.0% | |
| CATGCCATAGTGATGAGGAA+TGG | + | chr4_1:70334607-70334626 | Msa0568720:intron | 45.0% | |
| CTCACCATTCCTCATCACTA+TGG | - | chr4_1:70334614-70334633 | None:intergenic | 45.0% | |
| TAATGCACTAGGCAGTAGGA+TGG | - | chr4_1:70334912-70334931 | None:intergenic | 45.0% | |
| TTGCTAATGCACTAGGCAGT+AGG | - | chr4_1:70334916-70334935 | None:intergenic | 45.0% | |
| ! | GCACGCACACATTTTTGCAA+CGG | + | chr4_1:70334975-70334994 | Msa0568720:intron | 45.0% |
| TCAGAGGGTTTCACCATTAC+AGG | - | chr4_1:70335365-70335384 | None:intergenic | 45.0% | |
| TGTAATGGTGAAACCCTCTG+AGG | + | chr4_1:70335364-70335383 | Msa0568720:CDS | 45.0% | |
| TTTCTGTCCACTGCTCCATA+TGG | - | chr4_1:70335443-70335462 | None:intergenic | 45.0% | |
| !! | TGCTGTTTCATTATCTGCCG+TGG | + | chr4_1:70335548-70335567 | Msa0568720:intron | 45.0% |
| TTTCATTATCTGCCGTGGTG+AGG | + | chr4_1:70335553-70335572 | Msa0568720:intron | 45.0% | |
| GTGTGTGTGTGTGTTAACTG+AGG | + | chr4_1:70335615-70335634 | Msa0568720:intron | 45.0% | |
| TGAGCCATTTGGTCAGATTG+AGG | + | chr4_1:70335806-70335825 | Msa0568720:CDS | 45.0% | |
| ACTTCCTCTTGACATGGAGA+CGG | + | chr4_1:70335836-70335855 | Msa0568720:CDS | 45.0% | |
| TGCCCATCTTGAACATGCAA+AGG | + | chr4_1:70335974-70335993 | Msa0568720:CDS | 45.0% | |
| CTGCCTTTGCATGTTCAAGA+TGG | - | chr4_1:70335980-70335999 | None:intergenic | 45.0% | |
| !!! | GTTTTTGAGACCAACCAACC+GGG | + | chr4_1:70336700-70336719 | Msa0568720:intron | 45.0% |
| AGAAAAACTAAGGACCCGGT+TGG | - | chr4_1:70336717-70336736 | None:intergenic | 45.0% | |
| !! | TCACCGCACTTTCACTTTTC+AGG | + | chr4_1:70336752-70336771 | Msa0568720:intron | 45.0% |
| CATAAGCAACGCTCTTGAGT+GGG | - | chr4_1:70336927-70336946 | None:intergenic | 45.0% | |
| ATTGGTGTGCCAACTGTGAA+TGG | + | chr4_1:70337050-70337069 | Msa0568720:CDS | 45.0% | |
| TTGGTGTGCCAACTGTGAAT+GGG | + | chr4_1:70337051-70337070 | Msa0568720:CDS | 45.0% | |
| ATGCTAAAAGCCTGCTGAAC+AGG | - | chr4_1:70337083-70337102 | None:intergenic | 45.0% | |
| ! | CAGGCTTTTAGCATGCCTTT+TGG | + | chr4_1:70337089-70337108 | Msa0568720:CDS | 45.0% |
| ! | TTGTGTTGGTAGAACTGACG+CGG | - | chr4_1:70337132-70337151 | None:intergenic | 45.0% |
| ! | TATGTTTGATCCAAGCACCG+AGG | + | chr4_1:70337214-70337233 | Msa0568720:CDS | 45.0% |
| ! | AGAGTGTTCTAAATACGGCC+GGG | + | chr4_1:70337369-70337388 | Msa0568720:CDS | 45.0% |
| ! | TGTGTACACAGAAGAAGTGC+AGG | + | chr4_1:70337524-70337543 | Msa0568720:intron | 45.0% |
| AACGAGCAATGCACATGAGA+TGG | + | chr4_1:70337594-70337613 | Msa0568720:CDS | 45.0% | |
| AGAGAGAAAAAGGAAGCGAG+AGG | + | chr4_1:70337796-70337815 | Msa0568720:intron | 45.0% | |
| AAATTGTAATGCCCAGACGG+TGG | + | chr4_1:70338225-70338244 | Msa0568720:three_prime_UTR | 45.0% | |
| CTCAAAAATCACCACCGTCT+GGG | - | chr4_1:70338239-70338258 | None:intergenic | 45.0% | |
| !! | TTAAATAGTATAAATTTATA+CGG | + | chr4_1:70333989-70334008 | Msa0568720:intron | 5.0% |
| !! | CGACGAGAATGGCTCTAAGA+AGG | + | chr4_1:70332233-70332252 | Msa0568720:CDS | 50.0% |
| !! | GCTCTAAGAAGGATCGCGAT+AGG | + | chr4_1:70332244-70332263 | Msa0568720:CDS | 50.0% |
| AAGATCGTTCACGGTGCTCA+CGG | - | chr4_1:70332290-70332309 | None:intergenic | 50.0% | |
| GAGAAAGAGAGGGAGAAGGA+CGG | + | chr4_1:70332351-70332370 | Msa0568720:intron | 50.0% | |
| AGAGAGAGGTGGGAGAGATA+AGG | + | chr4_1:70332374-70332393 | Msa0568720:CDS | 50.0% | |
| AGGTGGGAGAGATAAGGAGA+GGG | + | chr4_1:70332380-70332399 | Msa0568720:CDS | 50.0% | |
| GGAGAGATAAGGAGAGGGAT+AGG | + | chr4_1:70332385-70332404 | Msa0568720:CDS | 50.0% | |
| GAGGGATAGGGAGAGAGAAA+AGG | + | chr4_1:70332398-70332417 | Msa0568720:CDS | 50.0% | |
| AGAGAGAAAAGGAGAGGGAG+AGG | + | chr4_1:70332409-70332428 | Msa0568720:CDS | 50.0% | |
| GGGAGAGGAGAGATAAGGAA+AGG | + | chr4_1:70332424-70332443 | Msa0568720:CDS | 50.0% | |
| GGAACGGGAGAGAAGAGATA+AGG | + | chr4_1:70332452-70332471 | Msa0568720:CDS | 50.0% | |
| ! | ACGGGCTGAGAGAGAAAAAG+AGG | + | chr4_1:70332488-70332507 | Msa0568720:CDS | 50.0% |
| AGGAGAAAGAGAGACCAAGG+AGG | + | chr4_1:70332508-70332527 | Msa0568720:CDS | 50.0% | |
| GCTGTCCAGAGTTCGAATCT+TGG | + | chr4_1:70333030-70333049 | Msa0568720:intron | 50.0% | |
| !! | CCTAAGTAGGGTTGGCTACA+TGG | - | chr4_1:70333255-70333274 | None:intergenic | 50.0% |
| CCATGTAGCCAACCCTACTT+AGG | + | chr4_1:70333252-70333271 | Msa0568720:intron | 50.0% | |
| ATGGATCTCAGTACCTCTCG+AGG | + | chr4_1:70333532-70333551 | Msa0568720:intron | 50.0% | |
| TGGATCTCAGTACCTCTCGA+GGG | + | chr4_1:70333533-70333552 | Msa0568720:intron | 50.0% | |
| TTATCCTGGTATCCCTGGTC+GGG | - | chr4_1:70333572-70333591 | None:intergenic | 50.0% | |
| CCAGATTATCCTGGTATCCC+TGG | - | chr4_1:70333577-70333596 | None:intergenic | 50.0% | |
| CCAGGGATACCAGGATAATC+TGG | + | chr4_1:70333574-70333593 | Msa0568720:intron | 50.0% | |
| TCATTACTCCCTCCGAAGAC+TGG | + | chr4_1:70333716-70333735 | Msa0568720:intron | 50.0% | |
| CATTACTCCCTCCGAAGACT+GGG | + | chr4_1:70333717-70333736 | Msa0568720:intron | 50.0% | |
| GTTCTTCTCGAAAGCTGGCA+AGG | + | chr4_1:70334114-70334133 | Msa0568720:CDS | 50.0% | |
| ! | CCCCCTTATTTGTAGGAACG+TGG | - | chr4_1:70334325-70334344 | None:intergenic | 50.0% |
| ! | CATGCAGCCCCCTTATTTGT+AGG | - | chr4_1:70334332-70334351 | None:intergenic | 50.0% |
| GAGAGATGTCCGTCTGATCA+TGG | + | chr4_1:70334439-70334458 | Msa0568720:CDS | 50.0% | |
| ! | AGTCTCTCACGTTGGTGTCT+AGG | + | chr4_1:70334831-70334850 | Msa0568720:intron | 50.0% |
| GTAGGATGGTTACCCACTAC+TGG | - | chr4_1:70334898-70334917 | None:intergenic | 50.0% | |
| GTGTGCGTGCGTGCAAATAA+AGG | - | chr4_1:70334965-70334984 | None:intergenic | 50.0% | |
| TGATGCGATGTCAGTGCCAA+TGG | + | chr4_1:70335304-70335323 | Msa0568720:CDS | 50.0% | |
| CTCTCTGGCCAACTACTTCT+CGG | + | chr4_1:70335335-70335354 | Msa0568720:CDS | 50.0% | |
| TCTCTGGCCAACTACTTCTC+GGG | + | chr4_1:70335336-70335355 | Msa0568720:CDS | 50.0% | |
| ACTTCTCGGGCAACCTGTAA+TGG | + | chr4_1:70335349-70335368 | Msa0568720:CDS | 50.0% | |
| GCTGCTGTAGTAGGACCATA+TGG | + | chr4_1:70335425-70335444 | Msa0568720:CDS | 50.0% | |
| AGTAGGACCATATGGAGCAG+TGG | + | chr4_1:70335433-70335452 | Msa0568720:CDS | 50.0% | |
| CTTCCTCTTGACATGGAGAC+GGG | + | chr4_1:70335837-70335856 | Msa0568720:CDS | 50.0% | |
| GGAAATTGGAGATTGCTGGC+AGG | + | chr4_1:70336015-70336034 | Msa0568720:CDS | 50.0% | |
| CATCAAACTCCCTGTCGTTC+AGG | - | chr4_1:70336362-70336381 | None:intergenic | 50.0% | |
| GCTGTTGAGGATTTGCACTC+AGG | + | chr4_1:70336494-70336513 | Msa0568720:intron | 50.0% | |
| AAACTAAGGACCCGGTTGGT+TGG | - | chr4_1:70336713-70336732 | None:intergenic | 50.0% | |
| GGGCCTGAAAAGTGAAAGTG+CGG | - | chr4_1:70336758-70336777 | None:intergenic | 50.0% | |
| !! | CTTTTCAGGCCCCTTTCTGT+TGG | + | chr4_1:70336766-70336785 | Msa0568720:intron | 50.0% |
| CGCTCTTGAGTGGGCATTTA+AGG | - | chr4_1:70336918-70336937 | None:intergenic | 50.0% | |
| GCATAAGCAACGCTCTTGAG+TGG | - | chr4_1:70336928-70336947 | None:intergenic | 50.0% | |
| !! | CTGGTACTGACATTCCCACA+AGG | + | chr4_1:70336957-70336976 | Msa0568720:CDS | 50.0% |
| TGTGCCAACTGTGAATGGGT+CGG | + | chr4_1:70337055-70337074 | Msa0568720:CDS | 50.0% | |
| ! | AGCATGCCTTTTGGCAATCC+AGG | + | chr4_1:70337098-70337117 | Msa0568720:CDS | 50.0% |
| ! | TGTGTTGGTAGAACTGACGC+GGG | - | chr4_1:70337131-70337150 | None:intergenic | 50.0% |
| !! | TTCCTACTGGTTCTGCCACA+GGG | - | chr4_1:70337166-70337185 | None:intergenic | 50.0% |
| !! | ATTCCTACTGGTTCTGCCAC+AGG | - | chr4_1:70337167-70337186 | None:intergenic | 50.0% |
| !! | TCATCACAAACCTCGGTGCT+TGG | - | chr4_1:70337227-70337246 | None:intergenic | 50.0% |
| ! | ACATGAGATGGTTTGCACGC+AGG | + | chr4_1:70337606-70337625 | Msa0568720:CDS | 50.0% |
| CCTCAAAAATCACCACCGTC+TGG | - | chr4_1:70338240-70338259 | None:intergenic | 50.0% | |
| ! | CCAGACGGTGGTGATTTTTG+AGG | + | chr4_1:70338237-70338256 | Msa0568720:three_prime_UTR | 50.0% |
| CGAGTACTTGGAGAAGACGG+TGG | + | chr4_1:70332062-70332081 | Msa0568720:CDS | 55.0% | |
| GTACTTGGAGAAGACGGTGG+AGG | + | chr4_1:70332065-70332084 | Msa0568720:CDS | 55.0% | |
| GTGCTTCCGGTAAGTCCTCT+CGG | - | chr4_1:70332151-70332170 | None:intergenic | 55.0% | |
| GAGAGGACTTACCGGAAGCA+CGG | + | chr4_1:70332150-70332169 | Msa0568720:CDS | 55.0% | |
| ! | GAGCACCGTGAACGATCTTC+CGG | + | chr4_1:70332291-70332310 | Msa0568720:intron | 55.0% |
| GACGACCGGAAGATCGTTCA+CGG | - | chr4_1:70332299-70332318 | None:intergenic | 55.0% | |
| AACGATCTTCCGGTCGTCAC+CGG | + | chr4_1:70332301-70332320 | Msa0568720:intron | 55.0% | |
| AGAAGGACGGAGAGAGAGGT+GGG | + | chr4_1:70332364-70332383 | Msa0568720:CDS | 55.0% | |
| GAGGTGGGAGAGATAAGGAG+AGG | + | chr4_1:70332379-70332398 | Msa0568720:CDS | 55.0% | |
| GGAGAGGGAGAGGAGAGATA+AGG | + | chr4_1:70332419-70332438 | Msa0568720:CDS | 55.0% | |
| GGACGACTCATACTCCTCCT+TGG | - | chr4_1:70332525-70332544 | None:intergenic | 55.0% | |
| AGTCGTCCTGAGAGAGACAG+AGG | + | chr4_1:70332537-70332556 | Msa0568720:CDS | 55.0% | |
| !! | ACCTCTCGAGGGATTAGTCC+TGG | + | chr4_1:70333544-70333563 | Msa0568720:intron | 55.0% |
| CCAAATTGGCGCCCAGTCTT+CGG | - | chr4_1:70333731-70333750 | None:intergenic | 55.0% | |
| AACCTGAGGCAGACCCAGAA+AGG | + | chr4_1:70333909-70333928 | Msa0568720:CDS | 55.0% | |
| ACCTGAGGCAGACCCAGAAA+GGG | + | chr4_1:70333910-70333929 | Msa0568720:CDS | 55.0% | |
| AGGCAACCAACCAACCTGGT+AGG | - | chr4_1:70333954-70333973 | None:intergenic | 55.0% | |
| ATGGAGGCAACCAACCAACC+TGG | - | chr4_1:70333958-70333977 | None:intergenic | 55.0% | |
| ! | CCAGAGAGCGCAATTGCCAT+TGG | - | chr4_1:70335323-70335342 | None:intergenic | 55.0% |
| CCAATGGCAATTGCGCTCTC+TGG | + | chr4_1:70335320-70335339 | Msa0568720:CDS | 55.0% | |
| CAGGTTGCCCGAGAAGTAGT+TGG | - | chr4_1:70335346-70335365 | None:intergenic | 55.0% | |
| TCCAGTGGAGCTGCTGTAGT+AGG | + | chr4_1:70335416-70335435 | Msa0568720:CDS | 55.0% | |
| TCCTACTACAGCAGCTCCAC+TGG | - | chr4_1:70335420-70335439 | None:intergenic | 55.0% | |
| GACTGAGGCTAATCTCCGAG+AGG | + | chr4_1:70335493-70335512 | Msa0568720:CDS | 55.0% | |
| TGTCCCGTCTCCATGTCAAG+AGG | - | chr4_1:70335843-70335862 | None:intergenic | 55.0% | |
| ATGGAGACGGGACACTGCAA+GGG | + | chr4_1:70335849-70335868 | Msa0568720:CDS | 55.0% | |
| ! | ACGGGACACTGCAAGGGTTT+TGG | + | chr4_1:70335855-70335874 | Msa0568720:CDS | 55.0% |
| ! | CGGGACACTGCAAGGGTTTT+GGG | + | chr4_1:70335856-70335875 | Msa0568720:CDS | 55.0% |
| GGCACACCAATGCTGCAGTT+GGG | - | chr4_1:70337041-70337060 | None:intergenic | 55.0% | |
| TGGCACACCAATGCTGCAGT+TGG | - | chr4_1:70337042-70337061 | None:intergenic | 55.0% | |
| GGAACCGACCCATTCACAGT+TGG | - | chr4_1:70337062-70337081 | None:intergenic | 55.0% | |
| ACTGACGCGGGTATAACACC+TGG | - | chr4_1:70337119-70337138 | None:intergenic | 55.0% | |
| ! | GGGGTAGGCATGACTTGTGT+TGG | - | chr4_1:70337146-70337165 | None:intergenic | 55.0% |
| ACAAGTCATGCCTACCCCTG+TGG | + | chr4_1:70337148-70337167 | Msa0568720:CDS | 55.0% | |
| !! | TCCTACTGGTTCTGCCACAG+GGG | - | chr4_1:70337165-70337184 | None:intergenic | 55.0% |
| CACTCGCTGGGAATTCCTAC+TGG | - | chr4_1:70337179-70337198 | None:intergenic | 55.0% | |
| GAAGACGGTGGAGGAGCAAC+CGG | + | chr4_1:70332074-70332093 | Msa0568720:CDS | 60.0% | |
| GGAGGAGCAACCGGAAGACA+AGG | + | chr4_1:70332083-70332102 | Msa0568720:CDS | 60.0% | |
| ATCTCGACGGCGGCGAAGAT+AGG | + | chr4_1:70332184-70332203 | Msa0568720:CDS | 60.0% | |
| GCGAAGATAGGCGGAGCAAG+AGG | + | chr4_1:70332196-70332215 | Msa0568720:CDS | 60.0% | |
| GGTGCTCACGGTCACGTTCA+CGG | - | chr4_1:70332278-70332297 | None:intergenic | 60.0% | |
| ACGATCTTCCGGTCGTCACC+GGG | + | chr4_1:70332302-70332321 | Msa0568720:intron | 60.0% | |
| CTCTCTCTCCGTCTCTCTCC+CGG | - | chr4_1:70332323-70332342 | None:intergenic | 60.0% | |
| AGGGAGAAGGACGGAGAGAG+AGG | + | chr4_1:70332360-70332379 | Msa0568720:CDS | 60.0% | |
| GAGAAGGACGGAGAGAGAGG+TGG | + | chr4_1:70332363-70332382 | Msa0568720:CDS | 60.0% | |
| CGCTCTCCTCTGTCTCTCTC+AGG | - | chr4_1:70332546-70332565 | None:intergenic | 60.0% | |
| GCCAGGACTAATCCCTCGAG+AGG | - | chr4_1:70333548-70333567 | None:intergenic | 60.0% | |
| ATTAGTCCTGGCTCCCGACC+AGG | + | chr4_1:70333556-70333575 | Msa0568720:intron | 60.0% | |
| TTAGTCCTGGCTCCCGACCA+GGG | + | chr4_1:70333557-70333576 | Msa0568720:intron | 60.0% | |
| ATTGGCGCCCAGTCTTCGGA+GGG | - | chr4_1:70333727-70333746 | None:intergenic | 60.0% | |
| AATTGGCGCCCAGTCTTCGG+AGG | - | chr4_1:70333728-70333747 | None:intergenic | 60.0% | |
| CCGAAGACTGGGCGCCAATT+TGG | + | chr4_1:70333728-70333747 | Msa0568720:intron | 60.0% | |
| TCCCTTTCTGGGTCTGCCTC+AGG | - | chr4_1:70333914-70333933 | None:intergenic | 60.0% | |
| GGTGGTGTGTGTGTGTGGAG+GGG | - | chr4_1:70334783-70334802 | None:intergenic | 60.0% | |
| GGGTGGTGTGTGTGTGTGGA+GGG | - | chr4_1:70334784-70334803 | None:intergenic | 60.0% | |
| GATGGGGTGGTGTGTGTGTG+TGG | - | chr4_1:70334788-70334807 | None:intergenic | 60.0% | |
| CATGGAGACGGGACACTGCA+AGG | + | chr4_1:70335848-70335867 | Msa0568720:CDS | 60.0% | |
| ! | TGGGTCGGTTCCTGTTCAGC+AGG | + | chr4_1:70337070-70337089 | Msa0568720:CDS | 60.0% |
| !! | ACTGGTTCTGCCACAGGGGT+AGG | - | chr4_1:70337161-70337180 | None:intergenic | 60.0% |
| ACCCCTGTGGCAGAACCAGT+AGG | + | chr4_1:70337161-70337180 | Msa0568720:CDS | 60.0% | |
| TCGACGGCGGCGAAGATAGG+CGG | + | chr4_1:70332187-70332206 | Msa0568720:CDS | 65.0% | |
| AGGCGGAGCAAGAGGTCACG+CGG | + | chr4_1:70332204-70332223 | Msa0568720:CDS | 65.0% | |
| GTCTCTCTCCCGGTGACGAC+CGG | - | chr4_1:70332313-70332332 | None:intergenic | 65.0% | |
| GGTCGTCACCGGGAGAGAGA+CGG | + | chr4_1:70332312-70332331 | Msa0568720:intron | 65.0% | |
| CGGGAGAGAGACGGAGAGAG+AGG | + | chr4_1:70332321-70332340 | Msa0568720:intron | 65.0% | |
| GGTGTGTGTGTGTGGAGGGG+AGG | - | chr4_1:70334780-70334799 | None:intergenic | 65.0% | |
| GGGGTGGTGTGTGTGTGTGG+AGG | - | chr4_1:70334785-70334804 | None:intergenic | 65.0% | |
| !! | GGCGCCGACGACGATCTCGA+CGG | + | chr4_1:70332171-70332190 | Msa0568720:CDS | 70.0% |
| GCCGACGACGATCTCGACGG+CGG | + | chr4_1:70332174-70332193 | Msa0568720:CDS | 70.0% | |
| GCCGCCGTCGAGATCGTCGT+CGG | - | chr4_1:70332178-70332197 | None:intergenic | 70.0% | |
| CGGAGCAAGAGGTCACGCGG+CGG | + | chr4_1:70332207-70332226 | Msa0568720:CDS | 70.0% | |
| CGCGGCGGAGACGACGAGAA+TGG | + | chr4_1:70332222-70332241 | Msa0568720:CDS | 70.0% | |
| GGTATCCCTGGTCGGGAGCC+AGG | - | chr4_1:70333565-70333584 | None:intergenic | 70.0% | |
| GGCTCCCGACCAGGGATACC+AGG | + | chr4_1:70333565-70333584 | Msa0568720:intron | 70.0% | |
| CGTCGTCGGCGCCGTGCTTC+CGG | - | chr4_1:70332164-70332183 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 70332045 | 70338401 | 70332045 | ID=Msa0568720;Name=Msa0568720 |
| chr4_1 | mRNA | 70332045 | 70338401 | 70332045 | ID=Msa0568720-mRNA-1;Parent=Msa0568720;Name=Msa0568720-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0.84|0.78|1|0.92|0.85|14|226|549 |
| chr4_1 | exon | 70332045 | 70332288 | 70332045 | ID=Msa0568720-mRNA-1:exon:23700;Parent=Msa0568720-mRNA-1 |
| chr4_1 | exon | 70332358 | 70332589 | 70332358 | ID=Msa0568720-mRNA-1:exon:23701;Parent=Msa0568720-mRNA-1 |
| chr4_1 | exon | 70333880 | 70333958 | 70333880 | ID=Msa0568720-mRNA-1:exon:23702;Parent=Msa0568720-mRNA-1 |
| chr4_1 | exon | 70334079 | 70334135 | 70334079 | ID=Msa0568720-mRNA-1:exon:23703;Parent=Msa0568720-mRNA-1 |
| chr4_1 | exon | 70334437 | 70334492 | 70334437 | ID=Msa0568720-mRNA-1:exon:23704;Parent=Msa0568720-mRNA-1 |
| chr4_1 | exon | 70335289 | 70335514 | 70335289 | ID=Msa0568720-mRNA-1:exon:23705;Parent=Msa0568720-mRNA-1 |
| chr4_1 | exon | 70335801 | 70335887 | 70335801 | ID=Msa0568720-mRNA-1:exon:23706;Parent=Msa0568720-mRNA-1 |
| chr4_1 | exon | 70335972 | 70336046 | 70335972 | ID=Msa0568720-mRNA-1:exon:23707;Parent=Msa0568720-mRNA-1 |
| chr4_1 | exon | 70336140 | 70336220 | 70336140 | ID=Msa0568720-mRNA-1:exon:23708;Parent=Msa0568720-mRNA-1 |
| chr4_1 | exon | 70336914 | 70336978 | 70336914 | ID=Msa0568720-mRNA-1:exon:23709;Parent=Msa0568720-mRNA-1 |
| chr4_1 | exon | 70337049 | 70337235 | 70337049 | ID=Msa0568720-mRNA-1:exon:23710;Parent=Msa0568720-mRNA-1 |
| chr4_1 | exon | 70337325 | 70337413 | 70337325 | ID=Msa0568720-mRNA-1:exon:23711;Parent=Msa0568720-mRNA-1 |
| chr4_1 | exon | 70337535 | 70337627 | 70337535 | ID=Msa0568720-mRNA-1:exon:23712;Parent=Msa0568720-mRNA-1 |
| chr4_1 | exon | 70338097 | 70338401 | 70338097 | ID=Msa0568720-mRNA-1:exon:23713;Parent=Msa0568720-mRNA-1 |
| chr4_1 | CDS | 70332045 | 70332288 | 70332045 | ID=Msa0568720-mRNA-1:cds;Parent=Msa0568720-mRNA-1 |
| chr4_1 | CDS | 70332358 | 70332589 | 70332358 | ID=Msa0568720-mRNA-1:cds;Parent=Msa0568720-mRNA-1 |
| chr4_1 | CDS | 70333880 | 70333958 | 70333880 | ID=Msa0568720-mRNA-1:cds;Parent=Msa0568720-mRNA-1 |
| chr4_1 | CDS | 70334079 | 70334135 | 70334079 | ID=Msa0568720-mRNA-1:cds;Parent=Msa0568720-mRNA-1 |
| chr4_1 | CDS | 70334437 | 70334492 | 70334437 | ID=Msa0568720-mRNA-1:cds;Parent=Msa0568720-mRNA-1 |
| chr4_1 | CDS | 70335289 | 70335514 | 70335289 | ID=Msa0568720-mRNA-1:cds;Parent=Msa0568720-mRNA-1 |
| chr4_1 | CDS | 70335801 | 70335887 | 70335801 | ID=Msa0568720-mRNA-1:cds;Parent=Msa0568720-mRNA-1 |
| chr4_1 | CDS | 70335972 | 70336046 | 70335972 | ID=Msa0568720-mRNA-1:cds;Parent=Msa0568720-mRNA-1 |
| chr4_1 | CDS | 70336140 | 70336220 | 70336140 | ID=Msa0568720-mRNA-1:cds;Parent=Msa0568720-mRNA-1 |
| chr4_1 | CDS | 70336914 | 70336978 | 70336914 | ID=Msa0568720-mRNA-1:cds;Parent=Msa0568720-mRNA-1 |
| chr4_1 | CDS | 70337049 | 70337235 | 70337049 | ID=Msa0568720-mRNA-1:cds;Parent=Msa0568720-mRNA-1 |
| chr4_1 | CDS | 70337325 | 70337413 | 70337325 | ID=Msa0568720-mRNA-1:cds;Parent=Msa0568720-mRNA-1 |
| chr4_1 | CDS | 70337535 | 70337627 | 70337535 | ID=Msa0568720-mRNA-1:cds;Parent=Msa0568720-mRNA-1 |
| chr4_1 | CDS | 70338097 | 70338175 | 70338097 | ID=Msa0568720-mRNA-1:cds;Parent=Msa0568720-mRNA-1 |
| chr4_1 | three_prime_UTR | 70338176 | 70338401 | 70338176 | ID=Msa0568720-mRNA-1:three_prime_utr;Parent=Msa0568720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
