AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1237630


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1237630 MtrunA17_Chr8g0343151 94.603 1223 30 1 1 1223 4176 5362 0.0 2347
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1237630 AT1G67120.1 39.724 1231 642 28 23 1221 4229 5391 0.0 722
Msa1237630 AT1G67120.2 39.724 1231 642 28 23 1221 4236 5398 0.0 722

Find 265 sgRNAs with CRISPR-Local

Find 388 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGATCCTTAAAATCCTTTA+TGG 0.092556 8_2:-17141235 None:intergenic
CATTGGATTGTTACCTTATT+GGG 0.129610 8_2:+17141124 Msa1237630:CDS
AAGCAGTTGAAGAGAAAATT+TGG 0.155146 8_2:+17142574 Msa1237630:CDS
TCATTGGATTGTTACCTTAT+TGG 0.171547 8_2:+17141123 Msa1237630:CDS
CCACGAGCGTATGTAGATTT+TGG 0.175675 8_2:-17141847 None:intergenic
TTCTTTGACAAGTGTTTAAA+TGG 0.187566 8_2:-17140945 None:intergenic
CAGGGGATGCACTTGATTTC+AGG 0.227311 8_2:+17143423 Msa1237630:CDS
AGATCTTCCAAACGACTTTC+AGG 0.229792 8_2:-17143812 None:intergenic
TAGAGAATTTGCAACTACTA+TGG 0.247247 8_2:+17140653 Msa1237630:exon
GATTCAGATGTATCATTCTT+TGG 0.253421 8_2:-17143101 None:intergenic
GTTCCTCAGAACGATATAAT+AGG 0.253474 8_2:-17145094 None:intergenic
AGATGTCTGCAAATTACTTT+TGG 0.258839 8_2:-17143174 None:intergenic
TCTTCAACTGCTTCACTATC+TGG 0.264057 8_2:-17142564 None:intergenic
CGAGGGTTCCATCATCTTCC+TGG 0.265277 8_2:-17142178 None:intergenic
TGCTGTTTCTCAACTTGAAA+TGG 0.281767 8_2:+17144374 Msa1237630:CDS
CTCTTGCTTGAACGTCAAAT+TGG 0.292023 8_2:-17144604 None:intergenic
GCGGGCATGTCTCATCTTCC+TGG 0.293173 8_2:-17142974 None:intergenic
TTTATCGTATGGATAAAATA+TGG 0.299376 8_2:+17144229 Msa1237630:CDS
TTCTGTGAATGATGAGGAAT+TGG 0.303741 8_2:+17143889 Msa1237630:CDS
ATGTCAGATTCATCAAATAC+TGG 0.309910 8_2:+17143311 Msa1237630:CDS
ATTGCTGCCTGGCACGTCTT+TGG 0.316643 8_2:-17142415 None:intergenic
GAACGCAACCATCCGGTTAC+TGG 0.327322 8_2:-17144889 None:intergenic
GGTATTATAAAACCGGAAAA+AGG 0.336070 8_2:+17144068 Msa1237630:CDS
CAAGTTGGTCCTGTTGTATC+TGG 0.337485 8_2:-17140593 None:intergenic
ATAATACCCTTGGAGCTTGC+TGG 0.342376 8_2:-17144053 None:intergenic
TGTGTTGATATGTGGACTTC+AGG 0.351759 8_2:-17141546 None:intergenic
CACTGCAGAGGCCGGGGTTA+AGG 0.353209 8_2:+17144467 Msa1237630:CDS
TCTTGATCTCCCTCTTCAAT+AGG 0.353357 8_2:-17142921 None:intergenic
CCATGATCAACCTTGGTTCA+TGG 0.356416 8_2:+17141614 Msa1237630:CDS
CGAAAATTTCAAGGCCATAA+AGG 0.363203 8_2:+17141221 Msa1237630:CDS
GTAATCACGTTTGTTGGGTC+TGG 0.363771 8_2:-17144262 None:intergenic
GAGTTTGATGATGAAGAAAA+TGG 0.364659 8_2:+17142780 Msa1237630:CDS
AACATAATCACAGGAATCAT+TGG 0.365219 8_2:+17141107 Msa1237630:intron
TGCTGTGGAAGGTGTGATTT+AGG 0.366923 8_2:-17143353 None:intergenic
GATGATAATGTTGATGAGTA+TGG 0.369008 8_2:+17143512 Msa1237630:CDS
AAAGGGGACAACTCAGGCTT+TGG 0.370214 8_2:+17143553 Msa1237630:CDS
AGCTTGGCCGTTGCAAGCTT+CGG 0.370255 8_2:+17144399 Msa1237630:CDS
TTGTAAGTAGCAAGCTGATT+TGG 0.373477 8_2:-17140741 None:intergenic
GGAGTCAATAATGGATCTTA+TGG 0.377000 8_2:+17144932 Msa1237630:CDS
AAATGGAGAAGATGTAAATA+TGG 0.377641 8_2:+17142797 Msa1237630:CDS
TGAGGAACTTGAATCAGAAA+TGG 0.382127 8_2:+17142530 Msa1237630:CDS
ATGCCCGCCTGATGAAATTA+TGG 0.382262 8_2:+17142989 Msa1237630:CDS
CATTGATCCTGAAAGTCGTT+TGG 0.383970 8_2:+17143805 Msa1237630:CDS
GCTGTTTCTCAACTTGAAAT+GGG 0.384793 8_2:+17144375 Msa1237630:CDS
TCAACCTGTTCCAACGTTGC+AGG 0.387249 8_2:-17143578 None:intergenic
TTGGTTCTCTTTAGGTTGCT+AGG 0.388120 8_2:+17140544 Msa1237630:intron
TTCTATCAGTAGATCATACT+TGG 0.388390 8_2:+17143838 Msa1237630:CDS
AACTTGGTAATCACGTTTGT+TGG 0.390622 8_2:-17144268 None:intergenic
AAAGAAAGAATAAATGTATC+TGG 0.390960 8_2:+17143446 Msa1237630:CDS
ATTTGTCGCAAATCTCAGTT+TGG 0.391044 8_2:+17141645 Msa1237630:CDS
AAAAGTAATTTGCAGACATC+TGG 0.397283 8_2:+17143176 Msa1237630:CDS
AACAGCAGCATCTAGCTTGT+TGG 0.399373 8_2:-17144673 None:intergenic
CCCTGTACTTCGGGAAGGAT+TGG 0.403347 8_2:-17143405 None:intergenic
CATGGAACATCTTGGTGAAA+TGG 0.410201 8_2:+17143487 Msa1237630:CDS
TTCGGCAACCCTGCTGTAAC+GGG 0.412352 8_2:+17143248 Msa1237630:CDS
GATTCTACCAGCGATCAATC+TGG 0.414987 8_2:+17142702 Msa1237630:CDS
CTCCAAGGGTATTATAAAAC+CGG 0.415132 8_2:+17144061 Msa1237630:CDS
GGGACCTGCAACGTTGGAAC+AGG 0.415771 8_2:+17143574 Msa1237630:CDS
TATGTTTCTGAATTTGAAAA+GGG 0.416417 8_2:+17143536 Msa1237630:CDS
TTCCTCAGAACGATATAATA+GGG 0.420351 8_2:-17145093 None:intergenic
GGCTTTGGGACCTGCAACGT+TGG 0.422049 8_2:+17143568 Msa1237630:CDS
AGTAGGTTTGCAAGAGTCCT+AGG 0.423364 8_2:-17145129 None:intergenic
TGGATTGAAGCCCGATGAAC+CGG 0.424015 8_2:+17142848 Msa1237630:CDS
TAACTCTCAGGAGTCAATAA+TGG 0.427581 8_2:+17144923 Msa1237630:CDS
TGGTTGCTTGTAGGCGAAAC+TGG 0.431505 8_2:+17141772 Msa1237630:intron
ACCCCGGCCTCTGCAGTGAA+TGG 0.431669 8_2:-17144462 None:intergenic
ATATGTTTCTGAATTTGAAA+AGG 0.432162 8_2:+17143535 Msa1237630:CDS
GATGCAAGTGGGACTGGCAT+GGG 0.433253 8_2:+17142212 Msa1237630:CDS
TGAGCAATTGCGTCTTGTAT+TGG 0.433785 8_2:+17144018 Msa1237630:CDS
GCATTATCCTTCACATGATC+AGG 0.434439 8_2:-17143938 None:intergenic
CATGATCAACCTTGGTTCAT+GGG 0.435584 8_2:+17141615 Msa1237630:CDS
CTTGCTTCTTGATAACTCTC+AGG 0.437203 8_2:+17144911 Msa1237630:CDS
ACAGGAGAAAAGTATGAATC+AGG 0.439600 8_2:+17142627 Msa1237630:CDS
AAGTGCATCCCCTGTACTTC+GGG 0.440584 8_2:-17143414 None:intergenic
AGGATAATGCTACTGCTCTC+TGG 0.440788 8_2:+17143951 Msa1237630:CDS
ACCAATCCTTCCCGAAGTAC+AGG 0.441596 8_2:+17143404 Msa1237630:CDS
ACTCCAGGAGGCATCCTTTG+AGG 0.442432 8_2:+17145026 Msa1237630:intron
ACTTGGTAATCACGTTTGTT+GGG 0.443417 8_2:-17144267 None:intergenic
GCTTCTTCCATAATTTCATC+AGG 0.444592 8_2:-17142996 None:intergenic
AGCCCATTCACTGCAGAGGC+CGG 0.445606 8_2:+17144459 Msa1237630:CDS
TCAACTTGAAATGGGGAGCT+TGG 0.446565 8_2:+17144383 Msa1237630:CDS
GCCCATTCACTGCAGAGGCC+GGG 0.446755 8_2:+17144460 Msa1237630:CDS
CAATAATACAGGTATAGAAA+TGG 0.446965 8_2:+17142434 Msa1237630:CDS
ATCTCAGACATATCACTTGA+AGG 0.449919 8_2:-17143278 None:intergenic
AGCAGTTGAAGAGAAAATTT+GGG 0.450424 8_2:+17142575 Msa1237630:CDS
AGAGAATTTGCAACTACTAT+GGG 0.453664 8_2:+17140654 Msa1237630:exon
GCTGCTGGGAACACGTGAAC+AGG 0.456287 8_2:+17142286 Msa1237630:CDS
GAAGAGTGATCCGGTTCATC+GGG 0.460939 8_2:-17142858 None:intergenic
TGGAGCTTGCTGGCCACTGT+GGG 0.461083 8_2:-17144043 None:intergenic
AACTGATGAAGATCAGCTGC+TGG 0.465615 8_2:+17142271 Msa1237630:CDS
GAGAAGCATTAGCCAGTAAC+CGG 0.468441 8_2:+17144877 Msa1237630:CDS
GGGAAAGGAGTCCATGTACT+TGG 0.468944 8_2:-17145067 None:intergenic
TGTATCATTCTTTGGATCCA+TGG 0.471203 8_2:-17143093 None:intergenic
GTGTTGATATGTGGACTTCA+GGG 0.472248 8_2:-17141545 None:intergenic
TCTGAAGATGCAAGTGGGAC+TGG 0.472778 8_2:+17142206 Msa1237630:CDS
GATGAGACTCCCAATGATAC+AGG 0.474145 8_2:+17142609 Msa1237630:CDS
TACTCAAGAAATGGAGCAGC+TGG 0.476210 8_2:+17141194 Msa1237630:CDS
GTAAAAGCACGACTTCCATC+TGG 0.478149 8_2:+17144696 Msa1237630:CDS
ATTAAAACAAGTTGCTGTAG+GGG 0.478719 8_2:-17144726 None:intergenic
CTCCAGGAGGCATCCTTTGA+GGG 0.479570 8_2:+17145027 Msa1237630:intron
AGATGTTCCATGTTATCCTC+AGG 0.480275 8_2:-17143476 None:intergenic
TATTAAAACAAGTTGCTGTA+GGG 0.480293 8_2:-17144727 None:intergenic
CCATGAACCAAGGTTGATCA+TGG 0.481550 8_2:-17141614 None:intergenic
CTTCGGCAACCCTGCTGTAA+CGG 0.481917 8_2:+17143247 Msa1237630:CDS
CCCCGGCCTCTGCAGTGAAT+GGG 0.482013 8_2:-17144461 None:intergenic
TAGAAACATTGATGTCGATA+AGG 0.483470 8_2:+17143601 Msa1237630:CDS
TAAAGATATAGCTCCTCAAC+AGG 0.483550 8_2:+17140364 Msa1237630:five_prime_UTR
GTTGCAAGCTTCGGAACAAA+AGG 0.485881 8_2:+17144408 Msa1237630:CDS
GCAGCACATTCTGATGCTAC+TGG 0.487798 8_2:+17142828 Msa1237630:CDS
CAGATCAACAACTGGTTCAT+CGG 0.488989 8_2:-17144637 None:intergenic
AAGGGGACAACTCAGGCTTT+GGG 0.490532 8_2:+17143554 Msa1237630:CDS
GAGGAACTTGAATCAGAAAT+GGG 0.492924 8_2:+17142531 Msa1237630:CDS
GGAAAACCTCCCGTTACAGC+AGG 0.493178 8_2:-17143257 None:intergenic
AACTTCAACAGATCAACAAC+TGG 0.493237 8_2:-17144645 None:intergenic
ATTCTACCAGCGATCAATCT+GGG 0.493298 8_2:+17142703 Msa1237630:CDS
TCTTGAGATTTCTCTATGAC+TGG 0.494447 8_2:-17143749 None:intergenic
ATAGAGAAATCTCAAGATGA+TGG 0.495726 8_2:+17143755 Msa1237630:CDS
CAATTTCGCGCTAAATGCAC+TGG 0.496153 8_2:-17140622 None:intergenic
AGGCCGGGGTTAAGGTTAGC+AGG 0.496347 8_2:+17144475 Msa1237630:CDS
TTATTAAAACAAGTTGCTGT+AGG 0.497084 8_2:-17144728 None:intergenic
AGATGCAAGTGGGACTGGCA+TGG 0.498267 8_2:+17142211 Msa1237630:CDS
CATGATGATTCAGCTGAGAA+TGG 0.499393 8_2:+17142948 Msa1237630:CDS
AGTCTGTGTGCTACATCAAA+TGG 0.502132 8_2:+17140889 Msa1237630:CDS
AGAAGAGTGATCCGGTTCAT+CGG 0.504181 8_2:-17142859 None:intergenic
GCAACATTCAAATTACTGAC+TGG 0.506390 8_2:+17145278 Msa1237630:exon
TGAGGAGCTATATCTTTATG+AGG 0.506700 8_2:-17140359 None:intergenic
CAAGTGCATCCCCTGTACTT+CGG 0.509461 8_2:-17143415 None:intergenic
TGAATCAGGACCTTCAGTTA+AGG 0.510155 8_2:+17142641 Msa1237630:CDS
CAGCACTACAAAGTTGTCTC+AGG 0.511170 8_2:+17143988 Msa1237630:CDS
GAGGAGTCCAAAGACGTGCC+AGG 0.511210 8_2:+17142408 Msa1237630:CDS
TACAGGTATAGAAATGGATC+AGG 0.511908 8_2:+17142440 Msa1237630:CDS
CACTGGTAAGAATTCTTCAA+TGG 0.517309 8_2:-17140998 None:intergenic
TAAGTAGCAAGCTGATTTGG+CGG 0.517407 8_2:-17140738 None:intergenic
ATACCTGTATTATTGCTGCC+TGG 0.517873 8_2:-17142426 None:intergenic
GCTTCATCAAACCTAGCATT+AGG 0.518748 8_2:-17141523 None:intergenic
TTGGAGCTTGCTGGCCACTG+TGG 0.521826 8_2:-17144044 None:intergenic
TTGGAAATGGGCTCCCACTT+TGG 0.522128 8_2:-17141828 None:intergenic
ACAGAAAACCAGGAAGATGA+TGG 0.522984 8_2:+17142170 Msa1237630:CDS
CTTCCATAATTTCATCAGGC+GGG 0.527854 8_2:-17142992 None:intergenic
CTTCATCTTTCCGCCCTCAA+AGG 0.529225 8_2:-17145040 None:intergenic
TGTCAGATTCATCAAATACT+GGG 0.529388 8_2:+17143312 Msa1237630:CDS
GAAGCAAGAACGCAACCATC+CGG 0.530175 8_2:-17144896 None:intergenic
GTATGGATAAAATATGGCTT+AGG 0.530661 8_2:+17144235 Msa1237630:CDS
ATTGGATTGTTACCTTATTG+GGG 0.533137 8_2:+17141125 Msa1237630:CDS
ATTTGAAAAGGGGACAACTC+AGG 0.534297 8_2:+17143547 Msa1237630:CDS
CATCAACAGCAATTACAACT+TGG 0.535239 8_2:-17144284 None:intergenic
GCCTTCTCAGATGAATCTAC+AGG 0.537340 8_2:-17141472 None:intergenic
GAATGATGACATGAATTCCA+TGG 0.539656 8_2:+17143076 Msa1237630:CDS
TTTCTTGTATTAAAAGCGAA+TGG 0.539870 8_2:+17141258 Msa1237630:CDS
CAGAACGATATAATAGGGAA+AGG 0.541188 8_2:-17145088 None:intergenic
ATCCCTTCCATGATCAACCT+TGG 0.541306 8_2:+17141607 Msa1237630:CDS
CGATCTCCCTGAGGATAACA+TGG 0.542041 8_2:+17143469 Msa1237630:CDS
CAGGAGCATCACAAGGTTCG+TGG 0.542415 8_2:-17143919 None:intergenic
AGAACGATATAATAGGGAAA+GGG 0.542852 8_2:-17145087 None:intergenic
ATGCAAGTGGGACTGGCATG+GGG 0.543642 8_2:+17142213 Msa1237630:CDS
AACATGCTTTATATTGAAGA+GGG 0.543986 8_2:+17145357 Msa1237630:three_prime_UTR
TTCAAGTGATATGTCTGAGA+TGG 0.544055 8_2:+17143280 Msa1237630:CDS
CATTAGCAGTTCTTCCAAAG+TGG 0.544465 8_2:+17141814 Msa1237630:CDS
TCTTGCAAACCTACTGAGAC+AGG 0.545107 8_2:+17145137 Msa1237630:CDS
GAGGATAACATGGAACATCT+TGG 0.545300 8_2:+17143479 Msa1237630:CDS
GAACCAAGGTTGATCATGGA+AGG 0.546015 8_2:-17141610 None:intergenic
CCTTCAGTTAAGGACGGAGA+TGG 0.546429 8_2:+17142651 Msa1237630:CDS
TCTGTGAATGATGAGGAATT+GGG 0.548105 8_2:+17143890 Msa1237630:CDS
TTGGATTGTTACCTTATTGG+GGG 0.548698 8_2:+17141126 Msa1237630:CDS
TCAGCTTGTCCAGATACAAC+AGG 0.548830 8_2:+17140584 Msa1237630:five_prime_UTR
GATGGATCAGTAAAGCCTCT+TGG 0.549246 8_2:+17143773 Msa1237630:CDS
CCCATTCACTGCAGAGGCCG+GGG 0.549745 8_2:+17144461 Msa1237630:CDS
TTTCACTAGACTCCTCACTA+AGG 0.550466 8_2:-17142485 None:intergenic
CCAATCCTTCCCGAAGTACA+GGG 0.551716 8_2:+17143405 Msa1237630:CDS
TGCTTCACTATCTGGTCCAG+TGG 0.552077 8_2:-17142556 None:intergenic
TTCAGCTGAGAATGGAAACC+AGG 0.553036 8_2:+17142956 Msa1237630:CDS
GCTGGTATCCGAAAATTTCA+AGG 0.553223 8_2:+17141212 Msa1237630:CDS
TCCTGTAGATTCATCTGAGA+AGG 0.553705 8_2:+17141471 Msa1237630:CDS
TCAACTAGCCATCACGACTT+CGG 0.556651 8_2:+17143230 Msa1237630:CDS
CAACATGCTTTATATTGAAG+AGG 0.556781 8_2:+17145356 Msa1237630:three_prime_UTR
GAATCAGAAATGGGTCCCAC+TGG 0.557784 8_2:+17142540 Msa1237630:CDS
ACCTTTGATTTACAGAACAC+TGG 0.559116 8_2:-17141015 None:intergenic
GATAAATCTGAAGATGCAAG+TGG 0.559823 8_2:+17142200 Msa1237630:CDS
GGGGATGACAGTTGTGATGA+AGG 0.560890 8_2:+17142723 Msa1237630:CDS
AAAGAAGTAGATCTGTACAT+TGG 0.561985 8_2:-17145515 None:intergenic
AAGCTGACTGAGGAAAGAAC+GGG 0.564921 8_2:-17140568 None:intergenic
ACCAGTGTTCTGTAAATCAA+AGG 0.566309 8_2:+17141014 Msa1237630:CDS
AGATGTAATGTGTTGATATG+TGG 0.566954 8_2:-17141554 None:intergenic
CAAATGCATGTGGCAACAGA+AGG 0.569141 8_2:+17140761 Msa1237630:CDS
CATTTGTTGAATATGTTGAA+AGG 0.569715 8_2:+17144543 Msa1237630:CDS
GTGCCAGGCAGCAATAATAC+AGG 0.570761 8_2:+17142423 Msa1237630:CDS
CAAGCTGACTGAGGAAAGAA+CGG 0.572373 8_2:-17140569 None:intergenic
TTCCCTATTATATCGTTCTG+AGG 0.572795 8_2:+17145091 Msa1237630:CDS
ATTGAAGAGGGAGATCAAGA+AGG 0.573024 8_2:+17142924 Msa1237630:CDS
CCATCTCCGTCCTTAACTGA+AGG 0.574087 8_2:-17142651 None:intergenic
ATTAGCAGTTCTTCCAAAGT+GGG 0.574907 8_2:+17141815 Msa1237630:CDS
TCCATGTCAGAAGAGTGATC+CGG 0.575311 8_2:-17142867 None:intergenic
ATCGCTGGTAGAATCATCCT+TGG 0.575713 8_2:-17142694 None:intergenic
TGGAAGATTAACAGAAAACC+AGG 0.578083 8_2:+17142160 Msa1237630:CDS
CAGTGGCCAGCAAGCTCCAA+GGG 0.580698 8_2:+17144047 Msa1237630:CDS
TAAGAATTCTTCAATGGAAG+CGG 0.581938 8_2:-17140992 None:intergenic
TGATAGCCCATTCACTGCAG+AGG 0.582172 8_2:+17144455 Msa1237630:CDS
GTTGACACAGAAAGTCGTGC+TGG 0.584372 8_2:+17143623 Msa1237630:CDS
AAATCCACATTGGAAACTTG+CGG 0.584474 8_2:-17143140 None:intergenic
TTGAAGAGGGAGATCAAGAA+GGG 0.585003 8_2:+17142925 Msa1237630:CDS
CAGGGTTGCCGAAGTCGTGA+TGG 0.588926 8_2:-17143238 None:intergenic
TGGATTGTTACCTTATTGGG+GGG 0.590139 8_2:+17141127 Msa1237630:CDS
CCAAAATCTACATACGCTCG+TGG 0.592860 8_2:+17141847 Msa1237630:CDS
TGCATCTTCAGATTTATCGA+GGG 0.596178 8_2:-17142195 None:intergenic
GTCATCCCCAGATTGATCGC+TGG 0.598608 8_2:-17142709 None:intergenic
ATCATGGAAGGGATAGTGAT+GGG 0.598798 8_2:-17141598 None:intergenic
TTGCATCTTCAGATTTATCG+AGG 0.600574 8_2:-17142196 None:intergenic
GGAACATTGAAGCACTGCCT+AGG 0.600837 8_2:+17145112 Msa1237630:CDS
GGCAACCCTGCTGTAACGGG+AGG 0.601925 8_2:+17143251 Msa1237630:CDS
CTGTTTCTCAACTTGAAATG+GGG 0.603982 8_2:+17144376 Msa1237630:CDS
GCGGTCATCTCACTCACTGA+AGG 0.605607 8_2:-17140973 None:intergenic
ACTGATGAAGATCAGCTGCT+GGG 0.605826 8_2:+17142272 Msa1237630:CDS
ACAGTGGCCAGCAAGCTCCA+AGG 0.606132 8_2:+17144046 Msa1237630:CDS
ATGCACTGGCAGCAGCAAGT+TGG 0.607783 8_2:-17140608 None:intergenic
TCAAGCTTACCTGTCTCAGT+AGG 0.609024 8_2:-17145146 None:intergenic
CAACAAAGAGCTAAGAGCCA+AGG 0.609938 8_2:+17142677 Msa1237630:CDS
TTAAAACAAGTTGCTGTAGG+GGG 0.610027 8_2:-17144725 None:intergenic
ACCGGATCACTCTTCTGACA+TGG 0.613084 8_2:+17142866 Msa1237630:CDS
ATGAATGCTCGTGCTGTGGA+AGG 0.613767 8_2:-17143364 None:intergenic
TGGATAAAATATGGCTTAGG+CGG 0.614626 8_2:+17144238 Msa1237630:CDS
GATCATGGAAGGGATAGTGA+TGG 0.619210 8_2:-17141599 None:intergenic
TTGCTGTGGTGATGTTGCTG+TGG 0.619667 8_2:+17144329 Msa1237630:CDS
AACCAAGGTTGATCATGGAA+GGG 0.620000 8_2:-17141609 None:intergenic
GATGTTCCATGTTATCCTCA+GGG 0.620974 8_2:-17143475 None:intergenic
TCTATCAGTAGATCATACTT+GGG 0.622482 8_2:+17143839 Msa1237630:CDS
GATATAATAGGGAAAGGGAA+AGG 0.624562 8_2:-17145082 None:intergenic
GATGCGGATCCTATTGAAGA+GGG 0.627689 8_2:+17142912 Msa1237630:CDS
TCAACTTTCTGTGAATGATG+AGG 0.630259 8_2:+17143883 Msa1237630:CDS
GCATCCCCTGTACTTCGGGA+AGG 0.631614 8_2:-17143410 None:intergenic
ATGTTTCTGAATTTGAAAAG+GGG 0.631757 8_2:+17143537 Msa1237630:CDS
AGATGCGGATCCTATTGAAG+AGG 0.636717 8_2:+17142911 Msa1237630:CDS
TTTGAATGCAAACGAAGATG+CGG 0.637519 8_2:+17142896 Msa1237630:CDS
AGCATTAGCCAGTAACCGGA+TGG 0.639089 8_2:+17144881 Msa1237630:CDS
AGATTGTGATGGTGAGAATG+AGG 0.640846 8_2:+17142512 Msa1237630:CDS
AGTGAAAATGAAGATTGTGA+TGG 0.641652 8_2:+17142501 Msa1237630:CDS
ATTGTAGTTCCCATGAACCA+AGG 0.642811 8_2:-17141624 None:intergenic
GAAAATGAATGCTCGTGCTG+TGG 0.644144 8_2:-17143368 None:intergenic
GCTTCACTATCTGGTCCAGT+GGG 0.644676 8_2:-17142555 None:intergenic
TGATGCTCCTGATCATGTGA+AGG 0.647414 8_2:+17143931 Msa1237630:CDS
GTCAGATTCATCAAATACTG+GGG 0.647861 8_2:+17143313 Msa1237630:CDS
TTGCTACTTACAAATGCATG+TGG 0.648663 8_2:+17140751 Msa1237630:CDS
TTTCAAGTTGAGAAACAGCA+CGG 0.655376 8_2:-17144371 None:intergenic
AGTGTGCGGAGCCTAATGCT+AGG 0.658772 8_2:+17141512 Msa1237630:CDS
TCAGGACCTTCAGTTAAGGA+CGG 0.661061 8_2:+17142645 Msa1237630:CDS
ACATGATCAGGAGCATCACA+AGG 0.661555 8_2:-17143926 None:intergenic
CAGGAGGCATCCTTTGAGGG+CGG 0.662331 8_2:+17145030 Msa1237630:intron
TCTTCCATAATTTCATCAGG+CGG 0.662545 8_2:-17142993 None:intergenic
TTCTACCAGCGATCAATCTG+GGG 0.662732 8_2:+17142704 Msa1237630:CDS
CTATATCTTTATGAGGATCG+AGG 0.664233 8_2:-17140352 None:intergenic
TAATCCGCAAGTTTCCAATG+TGG 0.664270 8_2:+17143136 Msa1237630:CDS
TGCAAGTGGGACTGGCATGG+GGG 0.664456 8_2:+17142214 Msa1237630:CDS
TTGTGATGCTAAATCCACAT+TGG 0.666330 8_2:-17143150 None:intergenic
TCAATGTTTGCACTACCAAG+AGG 0.668581 8_2:-17143788 None:intergenic
TGATGATTCACATAGCATGT+CGG 0.670922 8_2:+17144302 Msa1237630:CDS
ATAAATCTGAAGATGCAAGT+GGG 0.673391 8_2:+17142201 Msa1237630:CDS
GAAAACCTCCCGTTACAGCA+GGG 0.673746 8_2:-17143256 None:intergenic
TCAGATTCATCAAATACTGG+GGG 0.680789 8_2:+17143314 Msa1237630:CDS
AATCCTGCTAACCTTAACCC+CGG 0.682945 8_2:-17144478 None:intergenic
TACATCTGAATCTTCTGACG+TGG 0.685399 8_2:+17143112 Msa1237630:CDS
TGATGCTGTAAGCCTTAGTG+AGG 0.689459 8_2:+17142473 Msa1237630:CDS
CAATCCTTCCCGAAGTACAG+GGG 0.695275 8_2:+17143406 Msa1237630:CDS
TCTTGTATTGGAGCCCACAG+TGG 0.698176 8_2:+17144030 Msa1237630:CDS
AGCATGTCGGAGAGTTGCTG+TGG 0.706016 8_2:+17144315 Msa1237630:CDS
GTATCTGGACAAGCTGACTG+AGG 0.714270 8_2:-17140578 None:intergenic
TGTATCTGGCGATCTCCCTG+AGG 0.729892 8_2:+17143460 Msa1237630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTGTAATTACATTTTTATT+TGG + chr8_2:17140788-17140807 Msa1237630:intron 10.0%
!!! TAGACATTTTTTCTAAATAT+TGG + chr8_2:17140387-17140406 Msa1237630:intron 15.0%
!!! TTATGTTTTGCATAAATATA+AGG - chr8_2:17141094-17141113 None:intergenic 15.0%
!! AAAGAAAAAATTTATGAATC+CGG - chr8_2:17141397-17141416 None:intergenic 15.0%
!!! TTCATAAATTTTTTCTTTTC+AGG + chr8_2:17141399-17141418 Msa1237630:intron 15.0%
!! ATATTTATATATCAATTTGC+AGG + chr8_2:17142079-17142098 Msa1237630:intron 15.0%
!! CATATATAATGCAATATTAA+AGG - chr8_2:17142323-17142342 None:intergenic 15.0%
!! CTTTAATATTGCATTATATA+TGG + chr8_2:17142321-17142340 Msa1237630:intron 15.0%
!! ATAGTTATGAATATATAATG+AGG - chr8_2:17144803-17144822 None:intergenic 15.0%
!!! CTGTTTTTTTTTTTTTTTGT+TGG - chr8_2:17145478-17145497 None:intergenic 15.0%
!! AAAATTAAAACACACTCAAA+AGG - chr8_2:17140491-17140510 None:intergenic 20.0%
!! CTTTAAATTTGCAATACTTA+TGG + chr8_2:17141068-17141087 Msa1237630:intron 20.0%
!!! TTTTCAAGAAATAATTGACA+AGG + chr8_2:17141320-17141339 Msa1237630:CDS 20.0%
!! AAGAAAAAATTTATGAATCC+GGG - chr8_2:17141396-17141415 None:intergenic 20.0%
!!! TTTTCAAAACAATCACTTTT+GGG + chr8_2:17141686-17141705 Msa1237630:CDS 20.0%
!!! TATTTTAACTTTTCCTTTCT+TGG + chr8_2:17141732-17141751 Msa1237630:intron 20.0%
!! ATTACATATATTATGCAATC+AGG - chr8_2:17141983-17142002 None:intergenic 20.0%
!! GATTGCATAATATATGTAAT+TGG + chr8_2:17141983-17142002 Msa1237630:intron 20.0%
!!! TTAGTTTCTCTATTTTCAAA+AGG + chr8_2:17142134-17142153 Msa1237630:CDS 20.0%
!! AAAGAAAGAATAAATGTATC+TGG + chr8_2:17143446-17143465 Msa1237630:CDS 20.0%
!!! ATATGTTTCTGAATTTGAAA+AGG + chr8_2:17143535-17143554 Msa1237630:CDS 20.0%
!!! TATGTTTCTGAATTTGAAAA+GGG + chr8_2:17143536-17143555 Msa1237630:CDS 20.0%
!! AAAAAGGATACATATGAAAA+AGG + chr8_2:17144084-17144103 Msa1237630:CDS 20.0%
!! TTTATCGTATGGATAAAATA+TGG + chr8_2:17144229-17144248 Msa1237630:CDS 20.0%
!!! TCTAAATATTGGTAGTGTAA+AGG + chr8_2:17140398-17140417 Msa1237630:intron 25.0%
!!! AATTTTTTTTGTCGTGCATA+CGG + chr8_2:17140505-17140524 Msa1237630:intron 25.0%
!! TAACTTTTACTGTTATCAGT+GGG - chr8_2:17140702-17140721 None:intergenic 25.0%
!! ATAACTTTTACTGTTATCAG+TGG - chr8_2:17140703-17140722 None:intergenic 25.0%
! TTCTTTGACAAGTGTTTAAA+TGG - chr8_2:17140948-17140967 None:intergenic 25.0%
! TTTATGCAAAACATAATCAC+AGG + chr8_2:17141098-17141117 Msa1237630:intron 25.0%
!!! TTTTGTTGTTACTCAAGAAA+TGG + chr8_2:17141185-17141204 Msa1237630:CDS 25.0%
! ATGATCCTTAAAATCCTTTA+TGG - chr8_2:17141238-17141257 None:intergenic 25.0%
! TTTCTTGTATTAAAAGCGAA+TGG + chr8_2:17141258-17141277 Msa1237630:CDS 25.0%
!! ATTGACAAGGTATTAAACTT+TGG + chr8_2:17141333-17141352 Msa1237630:intron 25.0%
!!! TCAATTTTTTGGATTTCAGA+AGG - chr8_2:17141365-17141384 None:intergenic 25.0%
! AAAAAATTGAATGAGAAACC+CGG + chr8_2:17141375-17141394 Msa1237630:intron 25.0%
!! CTTTTCAAAACAATCACTTT+TGG + chr8_2:17141685-17141704 Msa1237630:CDS 25.0%
!!! TTTCAAAACAATCACTTTTG+GGG + chr8_2:17141687-17141706 Msa1237630:CDS 25.0%
! TGGTGACTAAAATGATTATA+TGG + chr8_2:17141752-17141771 Msa1237630:intron 25.0%
!! TCTCTATTTTCAAAAGGTTT+TGG + chr8_2:17142140-17142159 Msa1237630:CDS 25.0%
! TGCATTATATATGGCAAAAT+TGG + chr8_2:17142330-17142349 Msa1237630:intron 25.0%
! CAATAATACAGGTATAGAAA+TGG + chr8_2:17142434-17142453 Msa1237630:CDS 25.0%
! AAATGGAGAAGATGTAAATA+TGG + chr8_2:17142797-17142816 Msa1237630:CDS 25.0%
!! ATGTTTCTGAATTTGAAAAG+GGG + chr8_2:17143537-17143556 Msa1237630:CDS 25.0%
! TACTCCCTAAAAATGAAAAA+AGG + chr8_2:17143711-17143730 Msa1237630:CDS 25.0%
! ACTCCCTAAAAATGAAAAAA+GGG + chr8_2:17143712-17143731 Msa1237630:CDS 25.0%
!!! GATCCCTTTTTTCATTTTTA+GGG - chr8_2:17143718-17143737 None:intergenic 25.0%
!!! TGATCCCTTTTTTCATTTTT+AGG - chr8_2:17143719-17143738 None:intergenic 25.0%
!! TTTCATATGTATCCTTTTTC+CGG - chr8_2:17144083-17144102 None:intergenic 25.0%
! AACAGATGCATACTATTATA+AGG - chr8_2:17144141-17144160 None:intergenic 25.0%
!! CATTTGTTGAATATGTTGAA+AGG + chr8_2:17144543-17144562 Msa1237630:CDS 25.0%
! TATTAAAACAAGTTGCTGTA+GGG - chr8_2:17144730-17144749 None:intergenic 25.0%
! TTATTAAAACAAGTTGCTGT+AGG - chr8_2:17144731-17144750 None:intergenic 25.0%
!!! CTTGTTTTAATAATTGCAGA+CGG + chr8_2:17144738-17144757 Msa1237630:CDS 25.0%
! AGATAGAATAGATTCAAAGA+GGG - chr8_2:17144828-17144847 None:intergenic 25.0%
! AAGATAGAATAGATTCAAAG+AGG - chr8_2:17144829-17144848 None:intergenic 25.0%
!! GAATCTATTCTATCTTTTTC+AGG + chr8_2:17144833-17144852 Msa1237630:intron 25.0%
!!! TTTTTCAGGATAACTTAAAG+CGG + chr8_2:17144847-17144866 Msa1237630:intron 25.0%
!!! TTTTGTTGTGTTTATTTCAG+TGG + chr8_2:17145244-17145263 Msa1237630:intron 25.0%
! TGCATTCTTGAAATCAAAAA+TGG - chr8_2:17145332-17145351 None:intergenic 25.0%
! AACATGCTTTATATTGAAGA+GGG + chr8_2:17145357-17145376 Msa1237630:three_prime_UTR 25.0%
TAGAGAATTTGCAACTACTA+TGG + chr8_2:17140653-17140672 Msa1237630:exon 30.0%
AGAGAATTTGCAACTACTAT+GGG + chr8_2:17140654-17140673 Msa1237630:exon 30.0%
! AACTTTTACTGTTATCAGTG+GGG - chr8_2:17140701-17140720 None:intergenic 30.0%
!! ATGGAGAATTGCTTTTACTA+AGG + chr8_2:17140908-17140927 Msa1237630:CDS 30.0%
TAAGAATTCTTCAATGGAAG+CGG - chr8_2:17140995-17141014 None:intergenic 30.0%
AATCAAAGGTGAATACGTAA+TGG + chr8_2:17141028-17141047 Msa1237630:intron 30.0%
AACATAATCACAGGAATCAT+TGG + chr8_2:17141107-17141126 Msa1237630:intron 30.0%
TCATTGGATTGTTACCTTAT+TGG + chr8_2:17141123-17141142 Msa1237630:CDS 30.0%
CATTGGATTGTTACCTTATT+GGG + chr8_2:17141124-17141143 Msa1237630:CDS 30.0%
ATTGGATTGTTACCTTATTG+GGG + chr8_2:17141125-17141144 Msa1237630:CDS 30.0%
AGTAACAACAAAAAGATGTG+AGG - chr8_2:17141178-17141197 None:intergenic 30.0%
!! CTTTATGGCCTTGAAATTTT+CGG - chr8_2:17141223-17141242 None:intergenic 30.0%
!!! GGGTTTCTCATTCAATTTTT+TGG - chr8_2:17141376-17141395 None:intergenic 30.0%
!! TTTTCAGGCAAAATCAATTG+AGG + chr8_2:17141414-17141433 Msa1237630:intron 30.0%
! AGATGTAATGTGTTGATATG+TGG - chr8_2:17141557-17141576 None:intergenic 30.0%
GGAAAAGTTAAAATAACCTG+CGG - chr8_2:17141727-17141746 None:intergenic 30.0%
!! ATCATTTTAGTCACCAAGAA+AGG - chr8_2:17141748-17141767 None:intergenic 30.0%
ATGATTATATGGTTGCTTGT+AGG + chr8_2:17141763-17141782 Msa1237630:intron 30.0%
!! CGTATGTAGATTTTGGAAAT+GGG - chr8_2:17141843-17141862 None:intergenic 30.0%
!! GTTAGTATTGTTGTTTGAGA+TGG + chr8_2:17142041-17142060 Msa1237630:intron 30.0%
ATAAATCTGAAGATGCAAGT+GGG + chr8_2:17142201-17142220 Msa1237630:CDS 30.0%
TTTGTCAATGATGCAGAAAA+AGG + chr8_2:17142377-17142396 Msa1237630:intron 30.0%
AGTGAAAATGAAGATTGTGA+TGG + chr8_2:17142501-17142520 Msa1237630:CDS 30.0%
AAGCAGTTGAAGAGAAAATT+TGG + chr8_2:17142574-17142593 Msa1237630:CDS 30.0%
AGCAGTTGAAGAGAAAATTT+GGG + chr8_2:17142575-17142594 Msa1237630:CDS 30.0%
! TACTTTTCTCCTGTATCATT+GGG - chr8_2:17142621-17142640 None:intergenic 30.0%
! ATACTTTTCTCCTGTATCAT+TGG - chr8_2:17142622-17142641 None:intergenic 30.0%
!! GAGTTTGATGATGAAGAAAA+TGG + chr8_2:17142780-17142799 Msa1237630:CDS 30.0%
GATTCAGATGTATCATTCTT+TGG - chr8_2:17143104-17143123 None:intergenic 30.0%
! AGATGTCTGCAAATTACTTT+TGG - chr8_2:17143177-17143196 None:intergenic 30.0%
! AAAAGTAATTTGCAGACATC+TGG + chr8_2:17143176-17143195 Msa1237630:CDS 30.0%
ATGTCAGATTCATCAAATAC+TGG + chr8_2:17143311-17143330 Msa1237630:CDS 30.0%
TGTCAGATTCATCAAATACT+GGG + chr8_2:17143312-17143331 Msa1237630:CDS 30.0%
! GATGATAATGTTGATGAGTA+TGG + chr8_2:17143512-17143531 Msa1237630:CDS 30.0%
TAGAAACATTGATGTCGATA+AGG + chr8_2:17143601-17143620 Msa1237630:CDS 30.0%
ATAGAGAAATCTCAAGATGA+TGG + chr8_2:17143755-17143774 Msa1237630:CDS 30.0%
TTCTATCAGTAGATCATACT+TGG + chr8_2:17143838-17143857 Msa1237630:CDS 30.0%
TCTATCAGTAGATCATACTT+GGG + chr8_2:17143839-17143858 Msa1237630:CDS 30.0%
GGTATTATAAAACCGGAAAA+AGG + chr8_2:17144068-17144087 Msa1237630:CDS 30.0%
TGCTATGAATTGTATTACCT+GGG - chr8_2:17144205-17144224 None:intergenic 30.0%
TTGCTATGAATTGTATTACC+TGG - chr8_2:17144206-17144225 None:intergenic 30.0%
! CATAGCAAGTTTTTATCGTA+TGG + chr8_2:17144218-17144237 Msa1237630:CDS 30.0%
GTATGGATAAAATATGGCTT+AGG + chr8_2:17144235-17144254 Msa1237630:CDS 30.0%
!!! TGATTGTTTGTTTTTGACTG+AGG + chr8_2:17144569-17144588 Msa1237630:CDS 30.0%
ATTAAAACAAGTTGCTGTAG+GGG - chr8_2:17144729-17144748 None:intergenic 30.0%
AAGGTATGTGATTAACAATC+TGG + chr8_2:17144774-17144793 Msa1237630:intron 30.0%
CAAATCATAAAAGTCACTTG+TGG - chr8_2:17144971-17144990 None:intergenic 30.0%
AGAACGATATAATAGGGAAA+GGG - chr8_2:17145090-17145109 None:intergenic 30.0%
TTCCTCAGAACGATATAATA+GGG - chr8_2:17145096-17145115 None:intergenic 30.0%
!!! TCCACTTTTTTTTTCTGCTT+CGG - chr8_2:17145193-17145212 None:intergenic 30.0%
CAACATGCTTTATATTGAAG+AGG + chr8_2:17145356-17145375 Msa1237630:three_prime_UTR 30.0%
AGGGATTAGAAAAAGTCATT+GGG + chr8_2:17145376-17145395 Msa1237630:three_prime_UTR 30.0%
AAAAAGTCATTGGGTTACTT+GGG + chr8_2:17145385-17145404 Msa1237630:three_prime_UTR 30.0%
! GGGTCTGAATTTTGTATATA+TGG + chr8_2:17145405-17145424 Msa1237630:three_prime_UTR 30.0%
AAAGAAGTAGATCTGTACAT+TGG - chr8_2:17145518-17145537 None:intergenic 30.0%
CTATATCTTTATGAGGATCG+AGG - chr8_2:17140355-17140374 None:intergenic 35.0%
TGAGGAGCTATATCTTTATG+AGG - chr8_2:17140362-17140381 None:intergenic 35.0%
TAAAGATATAGCTCCTCAAC+AGG + chr8_2:17140364-17140383 Msa1237630:five_prime_UTR 35.0%
GAAAAAATGTCTACCTGTTG+AGG - chr8_2:17140380-17140399 None:intergenic 35.0%
! ACTTTTACTGTTATCAGTGG+GGG - chr8_2:17140700-17140719 None:intergenic 35.0%
TTGTAAGTAGCAAGCTGATT+TGG - chr8_2:17140744-17140763 None:intergenic 35.0%
! TTGCTACTTACAAATGCATG+TGG + chr8_2:17140751-17140770 Msa1237630:CDS 35.0%
CACTGGTAAGAATTCTTCAA+TGG - chr8_2:17141001-17141020 None:intergenic 35.0%
ACCAGTGTTCTGTAAATCAA+AGG + chr8_2:17141014-17141033 Msa1237630:CDS 35.0%
! ACCTTTGATTTACAGAACAC+TGG - chr8_2:17141018-17141037 None:intergenic 35.0%
! GGTGAATACGTAATGGTTTT+TGG + chr8_2:17141035-17141054 Msa1237630:intron 35.0%
TTGGATTGTTACCTTATTGG+GGG + chr8_2:17141126-17141145 Msa1237630:CDS 35.0%
CGAAAATTTCAAGGCCATAA+AGG + chr8_2:17141221-17141240 Msa1237630:CDS 35.0%
! CAAGGCCATAAAGGATTTTA+AGG + chr8_2:17141230-17141249 Msa1237630:CDS 35.0%
ACACTGTCTTTCGCAAAAAT+GGG - chr8_2:17141497-17141516 None:intergenic 35.0%
ATTTGTCGCAAATCTCAGTT+TGG + chr8_2:17141645-17141664 Msa1237630:CDS 35.0%
ATTAGCAGTTCTTCCAAAGT+GGG + chr8_2:17141815-17141834 Msa1237630:CDS 35.0%
!! GCGTATGTAGATTTTGGAAA+TGG - chr8_2:17141844-17141863 None:intergenic 35.0%
TGGAAGATTAACAGAAAACC+AGG + chr8_2:17142160-17142179 Msa1237630:CDS 35.0%
TGCATCTTCAGATTTATCGA+GGG - chr8_2:17142198-17142217 None:intergenic 35.0%
TTGCATCTTCAGATTTATCG+AGG - chr8_2:17142199-17142218 None:intergenic 35.0%
GATAAATCTGAAGATGCAAG+TGG + chr8_2:17142200-17142219 Msa1237630:CDS 35.0%
ATGGCAAAATTGGATTCTCA+AGG + chr8_2:17142340-17142359 Msa1237630:intron 35.0%
TACAGGTATAGAAATGGATC+AGG + chr8_2:17142440-17142459 Msa1237630:CDS 35.0%
! AGAAATGGATCAGGATTTTC+AGG + chr8_2:17142449-17142468 Msa1237630:CDS 35.0%
TGAGGAACTTGAATCAGAAA+TGG + chr8_2:17142530-17142549 Msa1237630:CDS 35.0%
GAGGAACTTGAATCAGAAAT+GGG + chr8_2:17142531-17142550 Msa1237630:CDS 35.0%
! ACAGGAGAAAAGTATGAATC+AGG + chr8_2:17142627-17142646 Msa1237630:CDS 35.0%
TTTGAATGCAAACGAAGATG+CGG + chr8_2:17142896-17142915 Msa1237630:CDS 35.0%
TCTTCCATAATTTCATCAGG+CGG - chr8_2:17142996-17143015 None:intergenic 35.0%
GCTTCTTCCATAATTTCATC+AGG - chr8_2:17142999-17143018 None:intergenic 35.0%
! TCCTCTGAAAAAGATGATCT+AGG + chr8_2:17143038-17143057 Msa1237630:CDS 35.0%
!!! ACCTAGATCATCTTTTTCAG+AGG - chr8_2:17143042-17143061 None:intergenic 35.0%
TGAAAAAGATGATCTAGGTC+AGG + chr8_2:17143043-17143062 Msa1237630:CDS 35.0%
GAATGATGACATGAATTCCA+TGG + chr8_2:17143076-17143095 Msa1237630:CDS 35.0%
TGTATCATTCTTTGGATCCA+TGG - chr8_2:17143096-17143115 None:intergenic 35.0%
AAATCCACATTGGAAACTTG+CGG - chr8_2:17143143-17143162 None:intergenic 35.0%
TTGTGATGCTAAATCCACAT+TGG - chr8_2:17143153-17143172 None:intergenic 35.0%
ATCTCAGACATATCACTTGA+AGG - chr8_2:17143281-17143300 None:intergenic 35.0%
TTCAAGTGATATGTCTGAGA+TGG + chr8_2:17143280-17143299 Msa1237630:CDS 35.0%
GTCAGATTCATCAAATACTG+GGG + chr8_2:17143313-17143332 Msa1237630:CDS 35.0%
TCAGATTCATCAAATACTGG+GGG + chr8_2:17143314-17143333 Msa1237630:CDS 35.0%
TCTTGAGATTTCTCTATGAC+TGG - chr8_2:17143752-17143771 None:intergenic 35.0%
TCAACTTTCTGTGAATGATG+AGG + chr8_2:17143883-17143902 Msa1237630:CDS 35.0%
TTCTGTGAATGATGAGGAAT+TGG + chr8_2:17143889-17143908 Msa1237630:CDS 35.0%
TCTGTGAATGATGAGGAATT+GGG + chr8_2:17143890-17143909 Msa1237630:CDS 35.0%
!! CTCCAAGGGTATTATAAAAC+CGG + chr8_2:17144061-17144080 Msa1237630:CDS 35.0%
!! TTCCGGTTTTATAATACCCT+TGG - chr8_2:17144066-17144085 None:intergenic 35.0%
TCTACGTCTTAAAAAATCCC+AGG + chr8_2:17144185-17144204 Msa1237630:intron 35.0%
TGGATAAAATATGGCTTAGG+CGG + chr8_2:17144238-17144257 Msa1237630:CDS 35.0%
! ACTTGGTAATCACGTTTGTT+GGG - chr8_2:17144270-17144289 None:intergenic 35.0%
! AACTTGGTAATCACGTTTGT+TGG - chr8_2:17144271-17144290 None:intergenic 35.0%
CATCAACAGCAATTACAACT+TGG - chr8_2:17144287-17144306 None:intergenic 35.0%
TGATGATTCACATAGCATGT+CGG + chr8_2:17144302-17144321 Msa1237630:CDS 35.0%
!! TTTCAAGTTGAGAAACAGCA+CGG - chr8_2:17144374-17144393 None:intergenic 35.0%
!! TGCTGTTTCTCAACTTGAAA+TGG + chr8_2:17144374-17144393 Msa1237630:CDS 35.0%
!! GCTGTTTCTCAACTTGAAAT+GGG + chr8_2:17144375-17144394 Msa1237630:CDS 35.0%
! CTGTTTCTCAACTTGAAATG+GGG + chr8_2:17144376-17144395 Msa1237630:CDS 35.0%
AACTTCAACAGATCAACAAC+TGG - chr8_2:17144648-17144667 None:intergenic 35.0%
TTAAAACAAGTTGCTGTAGG+GGG - chr8_2:17144728-17144747 None:intergenic 35.0%
TAACTCTCAGGAGTCAATAA+TGG + chr8_2:17144923-17144942 Msa1237630:CDS 35.0%
!! GGAGTCAATAATGGATCTTA+TGG + chr8_2:17144932-17144951 Msa1237630:CDS 35.0%
! GATGAAGTTTTCCAAGTACA+TGG + chr8_2:17145056-17145075 Msa1237630:CDS 35.0%
GATATAATAGGGAAAGGGAA+AGG - chr8_2:17145085-17145104 None:intergenic 35.0%
CAGAACGATATAATAGGGAA+AGG - chr8_2:17145091-17145110 None:intergenic 35.0%
TTCCCTATTATATCGTTCTG+AGG + chr8_2:17145091-17145110 Msa1237630:CDS 35.0%
GTTCCTCAGAACGATATAAT+AGG - chr8_2:17145097-17145116 None:intergenic 35.0%
!!! CTTTTTTTTTCTGCTTCGGT+CGG - chr8_2:17145189-17145208 None:intergenic 35.0%
ACCGAAGCAGAAAAAAAAAG+TGG + chr8_2:17145189-17145208 Msa1237630:intron 35.0%
GTTGTGTTTATTTCAGTGGT+TGG + chr8_2:17145248-17145267 Msa1237630:intron 35.0%
GCAACATTCAAATTACTGAC+TGG + chr8_2:17145278-17145297 Msa1237630:exon 35.0%
GAGGGATTAGAAAAAGTCAT+TGG + chr8_2:17145375-17145394 Msa1237630:three_prime_UTR 35.0%
GAAAAAGTCATTGGGTTACT+TGG + chr8_2:17145384-17145403 Msa1237630:three_prime_UTR 35.0%
TGTTTCATAACCCACCTCAA+TGG + chr8_2:17140430-17140449 Msa1237630:intron 40.0%
GATATTCAGTCCTACCATTG+AGG - chr8_2:17140447-17140466 None:intergenic 40.0%
CGGTATATTGAATGTGAGCT+TGG + chr8_2:17140525-17140544 Msa1237630:intron 40.0%
! ATGTGAGCTTGGTTCTCTTT+AGG + chr8_2:17140536-17140555 Msa1237630:intron 40.0%
!! TTGGTTCTCTTTAGGTTGCT+AGG + chr8_2:17140544-17140563 Msa1237630:intron 40.0%
!! TAAGTAGCAAGCTGATTTGG+CGG - chr8_2:17140741-17140760 None:intergenic 40.0%
AGTCTGTGTGCTACATCAAA+TGG + chr8_2:17140889-17140908 Msa1237630:CDS 40.0%
TGGATTGTTACCTTATTGGG+GGG + chr8_2:17141127-17141146 Msa1237630:CDS 40.0%
GCTGGTATCCGAAAATTTCA+AGG + chr8_2:17141212-17141231 Msa1237630:CDS 40.0%
TCCTGTAGATTCATCTGAGA+AGG + chr8_2:17141471-17141490 Msa1237630:CDS 40.0%
CACACTGTCTTTCGCAAAAA+TGG - chr8_2:17141498-17141517 None:intergenic 40.0%
! TTTTTGCGAAAGACAGTGTG+CGG + chr8_2:17141498-17141517 Msa1237630:CDS 40.0%
GCTTCATCAAACCTAGCATT+AGG - chr8_2:17141526-17141545 None:intergenic 40.0%
! GTGTTGATATGTGGACTTCA+GGG - chr8_2:17141548-17141567 None:intergenic 40.0%
! TGTGTTGATATGTGGACTTC+AGG - chr8_2:17141549-17141568 None:intergenic 40.0%
ATCATGGAAGGGATAGTGAT+GGG - chr8_2:17141601-17141620 None:intergenic 40.0%
! AACCAAGGTTGATCATGGAA+GGG - chr8_2:17141612-17141631 None:intergenic 40.0%
CATGATCAACCTTGGTTCAT+GGG + chr8_2:17141615-17141634 Msa1237630:CDS 40.0%
ATTGTAGTTCCCATGAACCA+AGG - chr8_2:17141627-17141646 None:intergenic 40.0%
!!! GGTAAGTTTTGTTTAACCGC+AGG + chr8_2:17141708-17141727 Msa1237630:intron 40.0%
CATTAGCAGTTCTTCCAAAG+TGG + chr8_2:17141814-17141833 Msa1237630:CDS 40.0%
GAAAGAGATAAGTGAGTGCT+AGG - chr8_2:17141937-17141956 None:intergenic 40.0%
CACTCACTTATCTCTTTCTG+TGG + chr8_2:17141939-17141958 Msa1237630:intron 40.0%
ACAGAAAACCAGGAAGATGA+TGG + chr8_2:17142170-17142189 Msa1237630:CDS 40.0%
!!! CACGTGAACAGGTTAGTTTT+CGG + chr8_2:17142297-17142316 Msa1237630:intron 40.0%
GTCAATGATGCAGAAAAAGG+AGG + chr8_2:17142380-17142399 Msa1237630:intron 40.0%
ATACCTGTATTATTGCTGCC+TGG - chr8_2:17142429-17142448 None:intergenic 40.0%
TTTCACTAGACTCCTCACTA+AGG - chr8_2:17142488-17142507 None:intergenic 40.0%
! AGATTGTGATGGTGAGAATG+AGG + chr8_2:17142512-17142531 Msa1237630:CDS 40.0%
TCTTCAACTGCTTCACTATC+TGG - chr8_2:17142567-17142586 None:intergenic 40.0%
TGAATCAGGACCTTCAGTTA+AGG + chr8_2:17142641-17142660 Msa1237630:CDS 40.0%
ATTCTACCAGCGATCAATCT+GGG + chr8_2:17142703-17142722 Msa1237630:CDS 40.0%
TCTTGATCTCCCTCTTCAAT+AGG - chr8_2:17142924-17142943 None:intergenic 40.0%
ATTGAAGAGGGAGATCAAGA+AGG + chr8_2:17142924-17142943 Msa1237630:CDS 40.0%
TTGAAGAGGGAGATCAAGAA+GGG + chr8_2:17142925-17142944 Msa1237630:CDS 40.0%
CATGATGATTCAGCTGAGAA+TGG + chr8_2:17142948-17142967 Msa1237630:CDS 40.0%
CTTCCATAATTTCATCAGGC+GGG - chr8_2:17142995-17143014 None:intergenic 40.0%
TACATCTGAATCTTCTGACG+TGG + chr8_2:17143112-17143131 Msa1237630:CDS 40.0%
TAATCCGCAAGTTTCCAATG+TGG + chr8_2:17143136-17143155 Msa1237630:CDS 40.0%
GATGTTCCATGTTATCCTCA+GGG - chr8_2:17143478-17143497 None:intergenic 40.0%
AGATGTTCCATGTTATCCTC+AGG - chr8_2:17143479-17143498 None:intergenic 40.0%
GAGGATAACATGGAACATCT+TGG + chr8_2:17143479-17143498 Msa1237630:CDS 40.0%
CATGGAACATCTTGGTGAAA+TGG + chr8_2:17143487-17143506 Msa1237630:CDS 40.0%
ATTTGAAAAGGGGACAACTC+AGG + chr8_2:17143547-17143566 Msa1237630:CDS 40.0%
TCAATGTTTGCACTACCAAG+AGG - chr8_2:17143791-17143810 None:intergenic 40.0%
CATTGATCCTGAAAGTCGTT+TGG + chr8_2:17143805-17143824 Msa1237630:CDS 40.0%
AGATCTTCCAAACGACTTTC+AGG - chr8_2:17143815-17143834 None:intergenic 40.0%
GCATTATCCTTCACATGATC+AGG - chr8_2:17143941-17143960 None:intergenic 40.0%
TGAGCAATTGCGTCTTGTAT+TGG + chr8_2:17144018-17144037 Msa1237630:CDS 40.0%
! TTTTGTTCCGAAGCTTGCAA+CGG - chr8_2:17144409-17144428 None:intergenic 40.0%
!! GTTTTTGACTGAGGAACAGA+TGG + chr8_2:17144578-17144597 Msa1237630:CDS 40.0%
CTCTTGCTTGAACGTCAAAT+TGG - chr8_2:17144607-17144626 None:intergenic 40.0%
! CAGATCAACAACTGGTTCAT+CGG - chr8_2:17144640-17144659 None:intergenic 40.0%
!! AGACGGTCGTTTTCATGAAA+AGG + chr8_2:17144755-17144774 Msa1237630:CDS 40.0%
! CTTGCTTCTTGATAACTCTC+AGG + chr8_2:17144911-17144930 Msa1237630:CDS 40.0%
CTGGAGTACAGAAAGTCAAA+AGG - chr8_2:17145013-17145032 None:intergenic 40.0%
!!! CTTTTGACTTTCTGTACTCC+AGG + chr8_2:17145011-17145030 Msa1237630:intron 40.0%
TCATAACCCACCTCAATGGT+AGG + chr8_2:17140434-17140453 Msa1237630:intron 45.0%
TTCAGTCCTACCATTGAGGT+GGG - chr8_2:17140443-17140462 None:intergenic 45.0%
ATTCAGTCCTACCATTGAGG+TGG - chr8_2:17140444-17140463 None:intergenic 45.0%
! AAAGGCACACAGAAAGAGGT+GGG - chr8_2:17140473-17140492 None:intergenic 45.0%
! AAAAGGCACACAGAAAGAGG+TGG - chr8_2:17140474-17140493 None:intergenic 45.0%
! CTCAAAAGGCACACAGAAAG+AGG - chr8_2:17140477-17140496 None:intergenic 45.0%
AAGCTGACTGAGGAAAGAAC+GGG - chr8_2:17140571-17140590 None:intergenic 45.0%
CAAGCTGACTGAGGAAAGAA+CGG - chr8_2:17140572-17140591 None:intergenic 45.0%
TCAGCTTGTCCAGATACAAC+AGG + chr8_2:17140584-17140603 Msa1237630:five_prime_UTR 45.0%
!! CAAGTTGGTCCTGTTGTATC+TGG - chr8_2:17140596-17140615 None:intergenic 45.0%
CAATTTCGCGCTAAATGCAC+TGG - chr8_2:17140625-17140644 None:intergenic 45.0%
TTTACTGTTATCAGTGGGGG+AGG - chr8_2:17140697-17140716 None:intergenic 45.0%
CAAATGCATGTGGCAACAGA+AGG + chr8_2:17140761-17140780 Msa1237630:CDS 45.0%
TACTCAAGAAATGGAGCAGC+TGG + chr8_2:17141194-17141213 Msa1237630:CDS 45.0%
GCCTTCTCAGATGAATCTAC+AGG - chr8_2:17141475-17141494 None:intergenic 45.0%
GATCATGGAAGGGATAGTGA+TGG - chr8_2:17141602-17141621 None:intergenic 45.0%
ATCCCTTCCATGATCAACCT+TGG + chr8_2:17141607-17141626 Msa1237630:CDS 45.0%
! GAACCAAGGTTGATCATGGA+AGG - chr8_2:17141613-17141632 None:intergenic 45.0%
! CCATGAACCAAGGTTGATCA+TGG - chr8_2:17141617-17141636 None:intergenic 45.0%
CCATGATCAACCTTGGTTCA+TGG + chr8_2:17141614-17141633 Msa1237630:CDS 45.0%
! CCACGAGCGTATGTAGATTT+TGG - chr8_2:17141850-17141869 None:intergenic 45.0%
CCAAAATCTACATACGCTCG+TGG + chr8_2:17141847-17141866 Msa1237630:CDS 45.0%
AACTGATGAAGATCAGCTGC+TGG + chr8_2:17142271-17142290 Msa1237630:CDS 45.0%
ACTGATGAAGATCAGCTGCT+GGG + chr8_2:17142272-17142291 Msa1237630:CDS 45.0%
GCAGAAAAAGGAGGAACAAG+AGG + chr8_2:17142389-17142408 Msa1237630:intron 45.0%
TGATGCTGTAAGCCTTAGTG+AGG + chr8_2:17142473-17142492 Msa1237630:CDS 45.0%
GATGAGACTCCCAATGATAC+AGG + chr8_2:17142609-17142628 Msa1237630:CDS 45.0%
TCAGGACCTTCAGTTAAGGA+CGG + chr8_2:17142645-17142664 Msa1237630:CDS 45.0%
CAACAAAGAGCTAAGAGCCA+AGG + chr8_2:17142677-17142696 Msa1237630:CDS 45.0%
ATCGCTGGTAGAATCATCCT+TGG - chr8_2:17142697-17142716 None:intergenic 45.0%
GATTCTACCAGCGATCAATC+TGG + chr8_2:17142702-17142721 Msa1237630:CDS 45.0%
TTCTACCAGCGATCAATCTG+GGG + chr8_2:17142704-17142723 Msa1237630:CDS 45.0%
AGAAGAGTGATCCGGTTCAT+CGG - chr8_2:17142862-17142881 None:intergenic 45.0%
TCCATGTCAGAAGAGTGATC+CGG - chr8_2:17142870-17142889 None:intergenic 45.0%
AGATGCGGATCCTATTGAAG+AGG + chr8_2:17142911-17142930 Msa1237630:CDS 45.0%
GATGCGGATCCTATTGAAGA+GGG + chr8_2:17142912-17142931 Msa1237630:CDS 45.0%
TTCAGCTGAGAATGGAAACC+AGG + chr8_2:17142956-17142975 Msa1237630:CDS 45.0%
ATGCCCGCCTGATGAAATTA+TGG + chr8_2:17142989-17143008 Msa1237630:CDS 45.0%
TCAACTAGCCATCACGACTT+CGG + chr8_2:17143230-17143249 Msa1237630:CDS 45.0%
! TGCTGTGGAAGGTGTGATTT+AGG - chr8_2:17143356-17143375 None:intergenic 45.0%
GAAAATGAATGCTCGTGCTG+TGG - chr8_2:17143371-17143390 None:intergenic 45.0%
GATGGATCAGTAAAGCCTCT+TGG + chr8_2:17143773-17143792 Msa1237630:CDS 45.0%
!! ACATGATCAGGAGCATCACA+AGG - chr8_2:17143929-17143948 None:intergenic 45.0%
TGATGCTCCTGATCATGTGA+AGG + chr8_2:17143931-17143950 Msa1237630:CDS 45.0%
AGGATAATGCTACTGCTCTC+TGG + chr8_2:17143951-17143970 Msa1237630:CDS 45.0%
CAGCACTACAAAGTTGTCTC+AGG + chr8_2:17143988-17144007 Msa1237630:CDS 45.0%
ATAATACCCTTGGAGCTTGC+TGG - chr8_2:17144056-17144075 None:intergenic 45.0%
! GTAATCACGTTTGTTGGGTC+TGG - chr8_2:17144265-17144284 None:intergenic 45.0%
TCAACTTGAAATGGGGAGCT+TGG + chr8_2:17144383-17144402 Msa1237630:CDS 45.0%
GTTGCAAGCTTCGGAACAAA+AGG + chr8_2:17144408-17144427 Msa1237630:CDS 45.0%
AATCCTGCTAACCTTAACCC+CGG - chr8_2:17144481-17144500 None:intergenic 45.0%
! AACAGCAGCATCTAGCTTGT+TGG - chr8_2:17144676-17144695 None:intergenic 45.0%
! GTAAAAGCACGACTTCCATC+TGG + chr8_2:17144696-17144715 Msa1237630:CDS 45.0%
!! GAGAAGCATTAGCCAGTAAC+CGG + chr8_2:17144877-17144896 Msa1237630:CDS 45.0%
TTGACTTTCTGTACTCCAGG+AGG + chr8_2:17145014-17145033 Msa1237630:intron 45.0%
AGTAGGTTTGCAAGAGTCCT+AGG - chr8_2:17145132-17145151 None:intergenic 45.0%
TCTTGCAAACCTACTGAGAC+AGG + chr8_2:17145137-17145156 Msa1237630:CDS 45.0%
TCAAGCTTACCTGTCTCAGT+AGG - chr8_2:17145149-17145168 None:intergenic 45.0%
TTTCTGCTTCGGTCGGATAA+AGG - chr8_2:17145182-17145201 None:intergenic 45.0%
GTATCTGGACAAGCTGACTG+AGG - chr8_2:17140581-17140600 None:intergenic 50.0%
TGGTTGCTTGTAGGCGAAAC+TGG + chr8_2:17141772-17141791 Msa1237630:intron 50.0%
! TTGGAAATGGGCTCCCACTT+TGG - chr8_2:17141831-17141850 None:intergenic 50.0%
TCTGAAGATGCAAGTGGGAC+TGG + chr8_2:17142206-17142225 Msa1237630:CDS 50.0%
GTGCCAGGCAGCAATAATAC+AGG + chr8_2:17142423-17142442 Msa1237630:CDS 50.0%
GAATCAGAAATGGGTCCCAC+TGG + chr8_2:17142540-17142559 Msa1237630:CDS 50.0%
GCTTCACTATCTGGTCCAGT+GGG - chr8_2:17142558-17142577 None:intergenic 50.0%
TGCTTCACTATCTGGTCCAG+TGG - chr8_2:17142559-17142578 None:intergenic 50.0%
CCATCTCCGTCCTTAACTGA+AGG - chr8_2:17142654-17142673 None:intergenic 50.0%
CCTTCAGTTAAGGACGGAGA+TGG + chr8_2:17142651-17142670 Msa1237630:CDS 50.0%
GGGGATGACAGTTGTGATGA+AGG + chr8_2:17142723-17142742 Msa1237630:CDS 50.0%
GCAGCACATTCTGATGCTAC+TGG + chr8_2:17142828-17142847 Msa1237630:CDS 50.0%
TGGATTGAAGCCCGATGAAC+CGG + chr8_2:17142848-17142867 Msa1237630:CDS 50.0%
GAAGAGTGATCCGGTTCATC+GGG - chr8_2:17142861-17142880 None:intergenic 50.0%
ACCGGATCACTCTTCTGACA+TGG + chr8_2:17142866-17142885 Msa1237630:CDS 50.0%
GAAAACCTCCCGTTACAGCA+GGG - chr8_2:17143259-17143278 None:intergenic 50.0%
ATGAATGCTCGTGCTGTGGA+AGG - chr8_2:17143367-17143386 None:intergenic 50.0%
ACCAATCCTTCCCGAAGTAC+AGG + chr8_2:17143404-17143423 Msa1237630:CDS 50.0%
CCAATCCTTCCCGAAGTACA+GGG + chr8_2:17143405-17143424 Msa1237630:CDS 50.0%
CAATCCTTCCCGAAGTACAG+GGG + chr8_2:17143406-17143425 Msa1237630:CDS 50.0%
AAGTGCATCCCCTGTACTTC+GGG - chr8_2:17143417-17143436 None:intergenic 50.0%
CAAGTGCATCCCCTGTACTT+CGG - chr8_2:17143418-17143437 None:intergenic 50.0%
CAGGGGATGCACTTGATTTC+AGG + chr8_2:17143423-17143442 Msa1237630:CDS 50.0%
CGATCTCCCTGAGGATAACA+TGG + chr8_2:17143469-17143488 Msa1237630:CDS 50.0%
AAAGGGGACAACTCAGGCTT+TGG + chr8_2:17143553-17143572 Msa1237630:CDS 50.0%
AAGGGGACAACTCAGGCTTT+GGG + chr8_2:17143554-17143573 Msa1237630:CDS 50.0%
TCAACCTGTTCCAACGTTGC+AGG - chr8_2:17143581-17143600 None:intergenic 50.0%
GTTGACACAGAAAGTCGTGC+TGG + chr8_2:17143623-17143642 Msa1237630:CDS 50.0%
TCTTGTATTGGAGCCCACAG+TGG + chr8_2:17144030-17144049 Msa1237630:CDS 50.0%
! TTGCTGTGGTGATGTTGCTG+TGG + chr8_2:17144329-17144348 Msa1237630:CDS 50.0%
TGATAGCCCATTCACTGCAG+AGG + chr8_2:17144455-17144474 Msa1237630:CDS 50.0%
CAAGTTGCTGTAGGGGGTTA+TGG - chr8_2:17144722-17144741 None:intergenic 50.0%
AGCATTAGCCAGTAACCGGA+TGG + chr8_2:17144881-17144900 Msa1237630:CDS 50.0%
GAAGCAAGAACGCAACCATC+CGG - chr8_2:17144899-17144918 None:intergenic 50.0%
CTTCATCTTTCCGCCCTCAA+AGG - chr8_2:17145043-17145062 None:intergenic 50.0%
GGGAAAGGAGTCCATGTACT+TGG - chr8_2:17145070-17145089 None:intergenic 50.0%
!! GGAACATTGAAGCACTGCCT+AGG + chr8_2:17145112-17145131 Msa1237630:CDS 50.0%
! ATGCACTGGCAGCAGCAAGT+TGG - chr8_2:17140611-17140630 None:intergenic 55.0%
GCGGTCATCTCACTCACTGA+AGG - chr8_2:17140976-17140995 None:intergenic 55.0%
CAGCTTTCGACCCCCCAATA+AGG - chr8_2:17141140-17141159 None:intergenic 55.0%
AGTGTGCGGAGCCTAATGCT+AGG + chr8_2:17141512-17141531 Msa1237630:CDS 55.0%
CGAGGGTTCCATCATCTTCC+TGG - chr8_2:17142181-17142200 None:intergenic 55.0%
! AGATGCAAGTGGGACTGGCA+TGG + chr8_2:17142211-17142230 Msa1237630:CDS 55.0%
! GATGCAAGTGGGACTGGCAT+GGG + chr8_2:17142212-17142231 Msa1237630:CDS 55.0%
! ATGCAAGTGGGACTGGCATG+GGG + chr8_2:17142213-17142232 Msa1237630:CDS 55.0%
ATTGCTGCCTGGCACGTCTT+TGG - chr8_2:17142418-17142437 None:intergenic 55.0%
GTCATCCCCAGATTGATCGC+TGG - chr8_2:17142712-17142731 None:intergenic 55.0%
CTTCGGCAACCCTGCTGTAA+CGG + chr8_2:17143247-17143266 Msa1237630:CDS 55.0%
TTCGGCAACCCTGCTGTAAC+GGG + chr8_2:17143248-17143267 Msa1237630:CDS 55.0%
GGAAAACCTCCCGTTACAGC+AGG - chr8_2:17143260-17143279 None:intergenic 55.0%
CCCTGTACTTCGGGAAGGAT+TGG - chr8_2:17143408-17143427 None:intergenic 55.0%
TGTATCTGGCGATCTCCCTG+AGG + chr8_2:17143460-17143479 Msa1237630:CDS 55.0%
!! CAGGAGCATCACAAGGTTCG+TGG - chr8_2:17143922-17143941 None:intergenic 55.0%
AGCATGTCGGAGAGTTGCTG+TGG + chr8_2:17144315-17144334 Msa1237630:CDS 55.0%
AGCTTGGCCGTTGCAAGCTT+CGG + chr8_2:17144399-17144418 Msa1237630:CDS 55.0%
TGTAGGGGGTTATGGCCAGA+TGG - chr8_2:17144714-17144733 None:intergenic 55.0%
GAACGCAACCATCCGGTTAC+TGG - chr8_2:17144892-17144911 None:intergenic 55.0%
!! ACTCCAGGAGGCATCCTTTG+AGG + chr8_2:17145026-17145045 Msa1237630:intron 55.0%
!! CTCCAGGAGGCATCCTTTGA+GGG + chr8_2:17145027-17145046 Msa1237630:intron 55.0%
! TGCAAGTGGGACTGGCATGG+GGG + chr8_2:17142214-17142233 Msa1237630:CDS 60.0%
! ACTGGCATGGGGGAAGGTGT+TGG + chr8_2:17142224-17142243 Msa1237630:CDS 60.0%
GCTGCTGGGAACACGTGAAC+AGG + chr8_2:17142286-17142305 Msa1237630:CDS 60.0%
GAGGAGTCCAAAGACGTGCC+AGG + chr8_2:17142408-17142427 Msa1237630:CDS 60.0%
GCGGGCATGTCTCATCTTCC+TGG - chr8_2:17142977-17142996 None:intergenic 60.0%
CAGGGTTGCCGAAGTCGTGA+TGG - chr8_2:17143241-17143260 None:intergenic 60.0%
GCATCCCCTGTACTTCGGGA+AGG - chr8_2:17143413-17143432 None:intergenic 60.0%
!! GGCTTTGGGACCTGCAACGT+TGG + chr8_2:17143568-17143587 Msa1237630:CDS 60.0%
GGGACCTGCAACGTTGGAAC+AGG + chr8_2:17143574-17143593 Msa1237630:CDS 60.0%
!! TGGAGCTTGCTGGCCACTGT+GGG - chr8_2:17144046-17144065 None:intergenic 60.0%
!! TTGGAGCTTGCTGGCCACTG+TGG - chr8_2:17144047-17144066 None:intergenic 60.0%
ACAGTGGCCAGCAAGCTCCA+AGG + chr8_2:17144046-17144065 Msa1237630:CDS 60.0%
CAGTGGCCAGCAAGCTCCAA+GGG + chr8_2:17144047-17144066 Msa1237630:CDS 60.0%
AGCCCATTCACTGCAGAGGC+CGG + chr8_2:17144459-17144478 Msa1237630:CDS 60.0%
AGGCCGGGGTTAAGGTTAGC+AGG + chr8_2:17144475-17144494 Msa1237630:CDS 60.0%
!! CAGGAGGCATCCTTTGAGGG+CGG + chr8_2:17145030-17145049 Msa1237630:intron 60.0%
! AGTGGGACTGGCATGGGGGA+AGG + chr8_2:17142218-17142237 Msa1237630:CDS 65.0%
! GGCAACCCTGCTGTAACGGG+AGG + chr8_2:17143251-17143270 Msa1237630:CDS 65.0%
GCCCATTCACTGCAGAGGCC+GGG + chr8_2:17144460-17144479 Msa1237630:CDS 65.0%
CCCCGGCCTCTGCAGTGAAT+GGG - chr8_2:17144464-17144483 None:intergenic 65.0%
CCCATTCACTGCAGAGGCCG+GGG + chr8_2:17144461-17144480 Msa1237630:CDS 65.0%
ACCCCGGCCTCTGCAGTGAA+TGG - chr8_2:17144465-17144484 None:intergenic 65.0%
CACTGCAGAGGCCGGGGTTA+AGG + chr8_2:17144467-17144486 Msa1237630:CDS 65.0%
CGCCCTCAAAGGATGCCTCC+TGG - chr8_2:17145032-17145051 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 17140319 17145560 17140319 ID=Msa1237630;Name=Msa1237630
chr8_2 mRNA 17140319 17145560 17140319 ID=Msa1237630-mRNA-1;Parent=Msa1237630;Name=Msa1237630-mRNA-1;_AED=0.03;_eAED=0.03;_QI=181|1|0.91|1|0.90|0.91|12|264|1223
chr8_2 exon 17140319 17140385 17140319 ID=Msa1237630-mRNA-1:exon:6399;Parent=Msa1237630-mRNA-1
chr8_2 exon 17140558 17140782 17140558 ID=Msa1237630-mRNA-1:exon:6400;Parent=Msa1237630-mRNA-1
chr8_2 exon 17140877 17141035 17140877 ID=Msa1237630-mRNA-1:exon:6401;Parent=Msa1237630-mRNA-1
chr8_2 exon 17141120 17141341 17141120 ID=Msa1237630-mRNA-1:exon:6402;Parent=Msa1237630-mRNA-1
chr8_2 exon 17141421 17141708 17141421 ID=Msa1237630-mRNA-1:exon:6403;Parent=Msa1237630-mRNA-1
chr8_2 exon 17141785 17141928 17141785 ID=Msa1237630-mRNA-1:exon:6404;Parent=Msa1237630-mRNA-1
chr8_2 exon 17142101 17142307 17142101 ID=Msa1237630-mRNA-1:exon:6405;Parent=Msa1237630-mRNA-1
chr8_2 exon 17142393 17144105 17142393 ID=Msa1237630-mRNA-1:exon:6406;Parent=Msa1237630-mRNA-1
chr8_2 exon 17144207 17144776 17144207 ID=Msa1237630-mRNA-1:exon:6407;Parent=Msa1237630-mRNA-1
chr8_2 exon 17144855 17144953 17144855 ID=Msa1237630-mRNA-1:exon:6408;Parent=Msa1237630-mRNA-1
chr8_2 exon 17145033 17145158 17145033 ID=Msa1237630-mRNA-1:exon:6409;Parent=Msa1237630-mRNA-1
chr8_2 exon 17145264 17145560 17145264 ID=Msa1237630-mRNA-1:exon:6410;Parent=Msa1237630-mRNA-1
chr8_2 five_prime_UTR 17140319 17140385 17140319 ID=Msa1237630-mRNA-1:five_prime_utr;Parent=Msa1237630-mRNA-1
chr8_2 five_prime_UTR 17140558 17140671 17140558 ID=Msa1237630-mRNA-1:five_prime_utr;Parent=Msa1237630-mRNA-1
chr8_2 CDS 17140672 17140782 17140672 ID=Msa1237630-mRNA-1:cds;Parent=Msa1237630-mRNA-1
chr8_2 CDS 17140877 17141035 17140877 ID=Msa1237630-mRNA-1:cds;Parent=Msa1237630-mRNA-1
chr8_2 CDS 17141120 17141341 17141120 ID=Msa1237630-mRNA-1:cds;Parent=Msa1237630-mRNA-1
chr8_2 CDS 17141421 17141708 17141421 ID=Msa1237630-mRNA-1:cds;Parent=Msa1237630-mRNA-1
chr8_2 CDS 17141785 17141928 17141785 ID=Msa1237630-mRNA-1:cds;Parent=Msa1237630-mRNA-1
chr8_2 CDS 17142101 17142307 17142101 ID=Msa1237630-mRNA-1:cds;Parent=Msa1237630-mRNA-1
chr8_2 CDS 17142393 17144105 17142393 ID=Msa1237630-mRNA-1:cds;Parent=Msa1237630-mRNA-1
chr8_2 CDS 17144207 17144776 17144207 ID=Msa1237630-mRNA-1:cds;Parent=Msa1237630-mRNA-1
chr8_2 CDS 17144855 17144953 17144855 ID=Msa1237630-mRNA-1:cds;Parent=Msa1237630-mRNA-1
chr8_2 CDS 17145033 17145158 17145033 ID=Msa1237630-mRNA-1:cds;Parent=Msa1237630-mRNA-1
chr8_2 CDS 17145264 17145296 17145264 ID=Msa1237630-mRNA-1:cds;Parent=Msa1237630-mRNA-1
chr8_2 three_prime_UTR 17145297 17145560 17145297 ID=Msa1237630-mRNA-1:three_prime_utr;Parent=Msa1237630-mRNA-1
Gene Sequence

>Msa1237630

ATGGGAAAGTTGTTTTCATTTTCCTCCCCCACTGATAACAGTAAAAGTTATATGTGCTCTATTGTTCCGCCAAATCAGCTTGCTACTTACAAATGCATGTGGCAACAGAAGCAATTATTTGATAGTCTGTGTGCTACATCAAATGGAGAATTGCTTTTACTAAGGATATTAGAAAATAGCCATTTAAACACTTGTCAAAGAACAAGACCTTCAGTGAGTGAGATGACCGCTTCCATTGAAGAATTCTTACCAGTGTTCTGTAAATCAAAGGAATCATTGGATTGTTACCTTATTGGGGGGTCGAAAGCTGTCACTACAATAGCATCCTCACATCTTTTTGTTGTTACTCAAGAAATGGAGCAGCTGGTATCCGAAAATTTCAAGGCCATAAAGGATTTTAAGGATCATTTTCTTGTATTAAAAGCGAATGGTATAGATAGAAGCTCAGTTAAAAATGTTCTGATTCATCATTTTCAAGAAATAATTGACAAGGCAAAATCAATTGAGGAAGAATTTATCACTGCAAAGAATGAAAATTCTAATCCTGTAGATTCATCTGAGAAGGCCCATTTTTGCGAAAGACAGTGTGCGGAGCCTAATGCTAGGTTTGATGAAGCCCTGAAGTCCACATATCAACACATTACATCTGTATTGCAGAGTTTATGTTCGCCCATCACTATCCCTTCCATGATCAACCTTGGTTCATGGGAACTACAATTTGTCGCAAATCTCAGTTTGGACATGCTATGTGATGATCTTTTCAAAACAATCACTTTTGGGGCGAAACTGGTGAATTGTTGTGACAATAACATTAGCAGTTCTTCCAAAGTGGGAGCCCATTTCCAAAATCTACATACGCTCGTGGATCTATTACTGAAATTCAGTGACGAGCTCTTGAAAAATTTCTTTGCTATGCACAAATCAGTAGCAGTAACAACTCATGTGATTGCAAATATTTTAGTTTCTCTATTTTCAAAAGGTTTTGGAAGATTAACAGAAAACCAGGAAGATGATGGAACCCTCGATAAATCTGAAGATGCAAGTGGGACTGGCATGGGGGAAGGTGTTGGACTAAATGATGTCAGTGATCAGATAACTGATGAAGATCAGCTGCTGGGAACACGTGAACAGAAAAAGGAGGAACAAGAGGAGTCCAAAGACGTGCCAGGCAGCAATAATACAGGTATAGAAATGGATCAGGATTTTCAGGCTGATGCTGTAAGCCTTAGTGAGGAGTCTAGTGAAAATGAAGATTGTGATGGTGAGAATGAGGAACTTGAATCAGAAATGGGTCCCACTGGACCAGATAGTGAAGCAGTTGAAGAGAAAATTTGGGATCAGAATGAAGATGAGACTCCCAATGATACAGGAGAAAAGTATGAATCAGGACCTTCAGTTAAGGACGGAGATGGAAGCAACAAAGAGCTAAGAGCCAAGGATGATTCTACCAGCGATCAATCTGGGGATGACAGTTGTGATGAAGGTGATGCTCAGAATGATGAAGCTGCAGCACAGAATGAGTTTGATGATGAAGAAAATGGAGAAGATGTAAATATGGACAAAGAAGCAGCACATTCTGATGCTACTGGATTGAAGCCCGATGAACCGGATCACTCTTCTGACATGGAAATAGATTTGAATGCAAACGAAGATGCGGATCCTATTGAAGAGGGAGATCAAGAAGGGCATGATGATTCAGCTGAGAATGGAAACCAGGAAGATGAGACATGCCCGCCTGATGAAATTATGGAAGAAGCACATACTGAAGTTGATGTATCCTCTGAAAAAGATGATCTAGGTCAGGAGCATCAAGAGAATGATGACATGAATTCCATGGATCCAAAGAATGATACATCTGAATCTTCTGACGTGGTTAATCCGCAAGTTTCCAATGTGGATTTAGCATCACAATCCAAAAGTAATTTGCAGACATCTGGTTCAGAAAATATTGCGTCAGAATCAAATTTGTCAACTAGCCATCACGACTTCGGCAACCCTGCTGTAACGGGAGGTTTTCCTTCAAGTGATATGTCTGAGATGGATATTAATATGTCAGATTCATCAAATACTGGGGGATTTAGTAAAACTCAACCTAAATCACACCTTCCACAGCACGAGCATTCATTTTCTCAAGAAAAACAAACCAATCCTTCCCGAAGTACAGGGGATGCACTTGATTTCAGGAAAGAAAGAATAAATGTATCTGGCGATCTCCCTGAGGATAACATGGAACATCTTGGTGAAATGGATGATGATAATGTTGATGAGTATGGATATGTTTCTGAATTTGAAAAGGGGACAACTCAGGCTTTGGGACCTGCAACGTTGGAACAGGTTGATAGAAACATTGATGTCGATAAGGTTGACACAGAAAGTCGTGCTGGAGAAGATGCAAATTTGCAGCTTGAGAAGCAAAACTCAGAAATAGATTCTGTAAGTAATTCTTCTTTACTCCCTAAAAATGAAAAAAGGGATCAAGCGAATATGCCAGTCATAGAGAAATCTCAAGATGATGGATCAGTAAAGCCTCTTGGTAGTGCAAACATTGATCCTGAAAGTCGTTTGGAAGATCTAATTTCTATCAGTAGATCATACTTGGGTGAGAACACACAAAAATTAAGTCAACTTTCTGTGAATGATGAGGAATTGGGAAAATACCACGAACCTTGTGATGCTCCTGATCATGTGAAGGATAATGCTACTGCTCTCTGGAGAAGATATGAACTCAGCACTACAAAGTTGTCTCAGGAACTGACTGAGCAATTGCGTCTTGTATTGGAGCCCACAGTGGCCAGCAAGCTCCAAGGGTATTATAAAACCGGAAAAAGGATACATATGAAAAAGGTAATACAATTCATAGCAAGTTTTTATCGTATGGATAAAATATGGCTTAGGCGGACCAGACCCAACAAACGTGATTACCAAGTTGTAATTGCTGTTGATGATTCACATAGCATGTCGGAGAGTTGCTGTGGTGATGTTGCTGTGGAAGCTTTAGTTACAGTATGCCGTGCTGTTTCTCAACTTGAAATGGGGAGCTTGGCCGTTGCAAGCTTCGGAACAAAAGGAAACATAAATTTGCTGCATGATTTTGATAGCCCATTCACTGCAGAGGCCGGGGTTAAGGTTAGCAGGATTTACACAAGTCTAGTTATTTTCTTTATTGACATCAGTGTTGTGCATTTGTTGAATATGTTGAAAGGATCTGATTGTTTGTTTTTGACTGAGGAACAGATGGTCTCCAATTTGACGTTCAAGCAAGAGAATACTATTGCCGATGAACCAGTTGTTGATCTGTTGAAGTTTTTGACCAACAAGCTAGATGCTGCTGTTGTAAAAGCACGACTTCCATCTGGCCATAACCCCCTACAGCAACTTGTTTTAATAATTGCAGACGGTCGTTTTCATGAAAAGGATAACTTAAAGCGGTGTGTTAGAGAAGCATTAGCCAGTAACCGGATGGTTGCGTTCTTGCTTCTTGATAACTCTCAGGAGTCAATAATGGATCTTATGGAGGCATCCTTTGAGGGCGGAAAGATGAAGTTTTCCAAGTACATGGACTCCTTTCCCTTTCCCTATTATATCGTTCTGAGGAACATTGAAGCACTGCCTAGGACTCTTGCAAACCTACTGAGACAGTGGTTGGAGCTTATGCAACATTCAAATTACTGA

Protein sequence

>Msa1237630

MGKLFSFSSPTDNSKSYMCSIVPPNQLATYKCMWQQKQLFDSLCATSNGELLLLRILENSHLNTCQRTRPSVSEMTASIEEFLPVFCKSKESLDCYLIGGSKAVTTIASSHLFVVTQEMEQLVSENFKAIKDFKDHFLVLKANGIDRSSVKNVLIHHFQEIIDKAKSIEEEFITAKNENSNPVDSSEKAHFCERQCAEPNARFDEALKSTYQHITSVLQSLCSPITIPSMINLGSWELQFVANLSLDMLCDDLFKTITFGAKLVNCCDNNISSSSKVGAHFQNLHTLVDLLLKFSDELLKNFFAMHKSVAVTTHVIANILVSLFSKGFGRLTENQEDDGTLDKSEDASGTGMGEGVGLNDVSDQITDEDQLLGTREQKKEEQEESKDVPGSNNTGIEMDQDFQADAVSLSEESSENEDCDGENEELESEMGPTGPDSEAVEEKIWDQNEDETPNDTGEKYESGPSVKDGDGSNKELRAKDDSTSDQSGDDSCDEGDAQNDEAAAQNEFDDEENGEDVNMDKEAAHSDATGLKPDEPDHSSDMEIDLNANEDADPIEEGDQEGHDDSAENGNQEDETCPPDEIMEEAHTEVDVSSEKDDLGQEHQENDDMNSMDPKNDTSESSDVVNPQVSNVDLASQSKSNLQTSGSENIASESNLSTSHHDFGNPAVTGGFPSSDMSEMDINMSDSSNTGGFSKTQPKSHLPQHEHSFSQEKQTNPSRSTGDALDFRKERINVSGDLPEDNMEHLGEMDDDNVDEYGYVSEFEKGTTQALGPATLEQVDRNIDVDKVDTESRAGEDANLQLEKQNSEIDSVSNSSLLPKNEKRDQANMPVIEKSQDDGSVKPLGSANIDPESRLEDLISISRSYLGENTQKLSQLSVNDEELGKYHEPCDAPDHVKDNATALWRRYELSTTKLSQELTEQLRLVLEPTVASKLQGYYKTGKRIHMKKVIQFIASFYRMDKIWLRRTRPNKRDYQVVIAVDDSHSMSESCCGDVAVEALVTVCRAVSQLEMGSLAVASFGTKGNINLLHDFDSPFTAEAGVKVSRIYTSLVIFFIDISVVHLLNMLKGSDCLFLTEEQMVSNLTFKQENTIADEPVVDLLKFLTNKLDAAVVKARLPSGHNPLQQLVLIIADGRFHEKDNLKRCVREALASNRMVAFLLLDNSQESIMDLMEASFEGGKMKFSKYMDSFPFPYYIVLRNIEALPRTLANLLRQWLELMQHSNY*