Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569140 | XP_003630258.2 | 95.194 | 645 | 31 | 0 | 1 | 645 | 18 | 662 | 0.0 | 1262 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569140 | sp|P99177|CSD_STAAN | 23.222 | 478 | 280 | 13 | 73 | 546 | 9 | 403 | 1.28e-20 | 98.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569140 | G7LE12 | 95.194 | 645 | 31 | 0 | 1 | 645 | 18 | 662 | 0.0 | 1262 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0569140 | Msa0705510 | 0.829198 | 5.885315e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569140 | MtrunA17_Chr8g0384181 | 95.194 | 645 | 31 | 0 | 1 | 645 | 18 | 662 | 0.0 | 1262 |
| Msa0569140 | MtrunA17_Chr8g0384171 | 68.356 | 651 | 168 | 7 | 5 | 645 | 13 | 635 | 0.0 | 918 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 142 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCCCAACATCAAGATTT+TGG | 0.137304 | 4_1:+70955123 | Msa0569140:CDS |
| TGAGAGCATCGTTAGCATTT+TGG | 0.175651 | 4_1:+70955020 | Msa0569140:CDS |
| AATCATCTTCTTCCTTTCTA+TGG | 0.211262 | 4_1:+70953485 | Msa0569140:CDS |
| CATTTCCACAAGTTTCTTAA+AGG | 0.219333 | 4_1:-70953297 | None:intergenic |
| CAACATTTCTAATCATTTAC+TGG | 0.236880 | 4_1:+70955831 | Msa0569140:CDS |
| AACATAGAAGAGAGGGAAAA+TGG | 0.248150 | 4_1:+70954971 | Msa0569140:CDS |
| TTCTAATATGTTGCTTGTTT+TGG | 0.256165 | 4_1:-70953243 | None:intergenic |
| ACAAGTTTCTTAAAGGATTC+AGG | 0.263856 | 4_1:-70953290 | None:intergenic |
| CTTAGTCCACATAAGTTTCT+TGG | 0.265340 | 4_1:+70954628 | Msa0569140:CDS |
| CATGAAGCGGCTTGCCTCTC+TGG | 0.274510 | 4_1:-70955276 | None:intergenic |
| ATCATTCAAATCTACTTTCT+TGG | 0.276230 | 4_1:+70954235 | Msa0569140:CDS |
| TGGTCGATTAGTATCTTTAT+AGG | 0.276407 | 4_1:-70954343 | None:intergenic |
| CTTAATTTGTGGCAAGAAAC+AGG | 0.289271 | 4_1:+70955250 | Msa0569140:CDS |
| AACTCTAAAGTAGAGGATAT+TGG | 0.295313 | 4_1:-70955992 | None:intergenic |
| TACGCTGATCACACTGCTTC+TGG | 0.312202 | 4_1:+70953428 | Msa0569140:CDS |
| TCACCTTCACTCATGTAATA+AGG | 0.322294 | 4_1:-70955667 | None:intergenic |
| CTCACTGTTTGGATTATTTG+AGG | 0.323804 | 4_1:-70955001 | None:intergenic |
| CTAACGATGCTCTCACTGTT+TGG | 0.339477 | 4_1:-70955012 | None:intergenic |
| TCTGCTTGTAGTAATGTAAC+TGG | 0.341389 | 4_1:+70954381 | Msa0569140:CDS |
| GAGGCTACTAGCAATATATT+TGG | 0.341891 | 4_1:-70955926 | None:intergenic |
| TGGCCACATCTAAATAAGTT+TGG | 0.352505 | 4_1:-70955906 | None:intergenic |
| CTTTAAGAAACTTGTGGAAA+TGG | 0.357233 | 4_1:+70953298 | Msa0569140:CDS |
| TTTCCCAAAATCTTGATGTT+GGG | 0.363233 | 4_1:-70955127 | None:intergenic |
| AAAAGTACTCCCGGAGAATC+AGG | 0.364713 | 4_1:-70954655 | None:intergenic |
| ACTCTAAAGTAGAGGATATT+GGG | 0.366433 | 4_1:-70955991 | None:intergenic |
| ATCAATTGATGAGCAAGAAT+TGG | 0.366969 | 4_1:-70955200 | None:intergenic |
| GCAGAGTTTGATTCTCCATT+TGG | 0.368437 | 4_1:+70953389 | Msa0569140:CDS |
| TGATGAAGGGTTGCTTGATA+TGG | 0.373761 | 4_1:+70954296 | Msa0569140:CDS |
| ATCCTTTCTCTAAGAATAGA+AGG | 0.374094 | 4_1:-70954156 | None:intergenic |
| GGGAATATTGCAGGAAGAAA+TGG | 0.375317 | 4_1:+70955966 | Msa0569140:CDS |
| GATACTAATCGACCATTGTT+AGG | 0.382968 | 4_1:+70954351 | Msa0569140:CDS |
| CAGAGAGGCAAGCCGCTTCA+TGG | 0.383600 | 4_1:+70955277 | Msa0569140:CDS |
| ACTTTCTTGGAGGCAGAGTT+TGG | 0.384563 | 4_1:+70954248 | Msa0569140:CDS |
| CTCGAGCTTGAATGCCAAAA+AGG | 0.392935 | 4_1:-70955327 | None:intergenic |
| TTGGCAGAGGTTGTAGAGAT+TGG | 0.397077 | 4_1:+70954267 | Msa0569140:CDS |
| GTGGAGATTGACATGGGATC+AGG | 0.397505 | 4_1:+70954577 | Msa0569140:CDS |
| TCTTGGTGGTCCTGATTCTC+CGG | 0.398856 | 4_1:+70954645 | Msa0569140:CDS |
| TCCACCTCAGGGAATATTGC+AGG | 0.399399 | 4_1:+70955957 | Msa0569140:CDS |
| ATTCCCTGAGGTGGAAACTT+AGG | 0.403632 | 4_1:-70955949 | None:intergenic |
| TCACTGTTTGGATTATTTGA+GGG | 0.410256 | 4_1:-70955000 | None:intergenic |
| TATATAGAGGAAAGAACCTT+TGG | 0.423081 | 4_1:-70955735 | None:intergenic |
| GTTTCCCAAAATCTTGATGT+TGG | 0.425618 | 4_1:-70955128 | None:intergenic |
| AAAAGACTTCAAGAAGTAAT+GGG | 0.426268 | 4_1:+70954123 | Msa0569140:CDS |
| CGAGGCGGGTGTGCTTGTGC+TGG | 0.427601 | 4_1:+70955346 | Msa0569140:CDS |
| CAAGTTTCTTAAAGGATTCA+GGG | 0.428525 | 4_1:-70953289 | None:intergenic |
| CAAAAGACTTCAAGAAGTAA+TGG | 0.430568 | 4_1:+70954122 | Msa0569140:CDS |
| ATGGGATCAGGGAGGAATGA+TGG | 0.431082 | 4_1:+70954589 | Msa0569140:CDS |
| TCCGCCTCCACAAGTGGATG+GGG | 0.435075 | 4_1:-70954713 | None:intergenic |
| TTGAGCAAAGCTGCAACAAA+AGG | 0.437113 | 4_1:-70955301 | None:intergenic |
| CCTCCCTAAGTTTCCACCTC+AGG | 0.441495 | 4_1:+70955945 | Msa0569140:CDS |
| GCAATCATCTTCTGTGGCTC+AGG | 0.443522 | 4_1:+70954084 | Msa0569140:CDS |
| CTTGGTGGTCCTGATTCTCC+GGG | 0.449267 | 4_1:+70954646 | Msa0569140:CDS |
| TTTGTTTAGTGGTCCGTATG+TGG | 0.459507 | 4_1:+70954558 | Msa0569140:intron |
| TTCCCTGAGGTGGAAACTTA+GGG | 0.463100 | 4_1:-70955948 | None:intergenic |
| GAGATTGGCTTAGATGATGA+AGG | 0.464045 | 4_1:+70954282 | Msa0569140:CDS |
| TCCTCCACAGTTTCATTACA+AGG | 0.464641 | 4_1:-70953326 | None:intergenic |
| TCCACTTGAGGAATGGAAGT+TGG | 0.467134 | 4_1:+70955761 | Msa0569140:CDS |
| TGTGCTTGTGCTGGACCTTA+CGG | 0.467618 | 4_1:+70955355 | Msa0569140:CDS |
| GCCTTAGCAAAGAAGAAAGA+TGG | 0.468675 | 4_1:+70954187 | Msa0569140:CDS |
| TGCCTTCTATTCTTAGAGAA+AGG | 0.468738 | 4_1:+70954154 | Msa0569140:CDS |
| TTCCGCCTCCACAAGTGGAT+GGG | 0.469410 | 4_1:-70954714 | None:intergenic |
| TGTCAATGCATTCGATGAAA+AGG | 0.469733 | 4_1:+70954747 | Msa0569140:CDS |
| CCCATCTTTCTTCTTTGCTA+AGG | 0.470399 | 4_1:-70954188 | None:intergenic |
| CACTGTTTGGATTATTTGAG+GGG | 0.470973 | 4_1:-70954999 | None:intergenic |
| CTCTATATAGCTTCCACTTG+AGG | 0.476070 | 4_1:+70955749 | Msa0569140:CDS |
| TCCAACTTCCATTCCTCAAG+TGG | 0.482777 | 4_1:-70955762 | None:intergenic |
| TTCCCAAAATCTTGATGTTG+GGG | 0.488915 | 4_1:-70955126 | None:intergenic |
| TTGGAGGCAGAGTTTGGCAG+AGG | 0.492636 | 4_1:+70954254 | Msa0569140:CDS |
| TTGGCATTCAAGCTCGAGGC+GGG | 0.496882 | 4_1:+70955332 | Msa0569140:CDS |
| CTCAAGTGGAAGCTATATAG+AGG | 0.499649 | 4_1:-70955748 | None:intergenic |
| GAGTACATTAAGAAATGCTT+AGG | 0.500122 | 4_1:+70954045 | Msa0569140:CDS |
| CAAGAAACTTATGTGGACTA+AGG | 0.500580 | 4_1:-70954627 | None:intergenic |
| ATTCAAATCTACTTTCTTGG+AGG | 0.501194 | 4_1:+70954238 | Msa0569140:CDS |
| CTCCCTAAGTTTCCACCTCA+GGG | 0.505226 | 4_1:+70955946 | Msa0569140:CDS |
| GACAGTTCCGCCTCCACAAG+TGG | 0.505419 | 4_1:-70954719 | None:intergenic |
| TCATACTTGCGACAGTTATG+TGG | 0.505486 | 4_1:+70953987 | Msa0569140:CDS |
| GGCTATATCGGAGTAAAACC+TGG | 0.510918 | 4_1:+70955625 | Msa0569140:CDS |
| TGGGATCAGGGAGGAATGAT+GGG | 0.513684 | 4_1:+70954590 | Msa0569140:CDS |
| GTTCCGCCTCCACAAGTGGA+TGG | 0.514497 | 4_1:-70954715 | None:intergenic |
| TGAATCCTTTAAGAAACTTG+TGG | 0.516307 | 4_1:+70953292 | Msa0569140:CDS |
| CAAAATCTTGATGTTGGGGT+TGG | 0.516688 | 4_1:-70955122 | None:intergenic |
| TGGTTGCGGTCTCAAATCAT+AGG | 0.522944 | 4_1:+70953359 | Msa0569140:CDS |
| AAACTAACTCTTGTCCATCC+AGG | 0.525967 | 4_1:-70955643 | None:intergenic |
| TGAAGTGACGTACCATAGAA+AGG | 0.527586 | 4_1:-70953497 | None:intergenic |
| AGTCCACATAAGTTTCTTGG+TGG | 0.530242 | 4_1:+70954631 | Msa0569140:CDS |
| AATGAAGACTGAGAAATTTG+AGG | 0.532113 | 4_1:+70955786 | Msa0569140:CDS |
| AACATTTCTAATCATTTACT+GGG | 0.533000 | 4_1:+70955832 | Msa0569140:CDS |
| TCCTGCAATATTCCCTGAGG+TGG | 0.536985 | 4_1:-70955958 | None:intergenic |
| CATGGAGAACATAGAAGAGA+GGG | 0.537066 | 4_1:+70954964 | Msa0569140:CDS |
| AGCTTTGAAGCTGCAACTTG+AGG | 0.539004 | 4_1:+70954320 | Msa0569140:CDS |
| TATAGCTTCCACTTGAGGAA+TGG | 0.541688 | 4_1:+70955754 | Msa0569140:CDS |
| TGGAGATTGACATGGGATCA+GGG | 0.548198 | 4_1:+70954578 | Msa0569140:CDS |
| ATTAAGAAATGCTTAGGTGG+TGG | 0.549911 | 4_1:+70954051 | Msa0569140:CDS |
| TTTCCTTATTACATGAGTGA+AGG | 0.550089 | 4_1:+70955664 | Msa0569140:CDS |
| TAGATTTGAATGATGCTCAT+GGG | 0.551631 | 4_1:-70954226 | None:intergenic |
| TGATGAACAAGGCTTTGTAT+CGG | 0.551815 | 4_1:+70954677 | Msa0569140:CDS |
| AGATTGGCTTAGATGATGAA+GGG | 0.558204 | 4_1:+70954283 | Msa0569140:CDS |
| TGAGCAAAGCTGCAACAAAA+GGG | 0.563023 | 4_1:-70955300 | None:intergenic |
| TTGTTCATCAAAAGTACTCC+CGG | 0.566646 | 4_1:-70954664 | None:intergenic |
| GAACCAAACTTATTTAGATG+TGG | 0.572778 | 4_1:+70955903 | Msa0569140:CDS |
| TTGAGTAATTCGTGTCCGTA+AGG | 0.573220 | 4_1:-70955370 | None:intergenic |
| GTAGATTTGAATGATGCTCA+TGG | 0.576542 | 4_1:-70954227 | None:intergenic |
| AGTTGTAGCCAAGAACATGA+AGG | 0.580235 | 4_1:+70955223 | Msa0569140:CDS |
| AATGATGCAATCATCTTCTG+TGG | 0.582378 | 4_1:+70954078 | Msa0569140:CDS |
| GAAATTTGAGGCAGTAAACA+AGG | 0.585681 | 4_1:+70955798 | Msa0569140:CDS |
| CCCATGTCAATCTCCACATA+CGG | 0.591025 | 4_1:-70954571 | None:intergenic |
| CCTTAGCAAAGAAGAAAGAT+GGG | 0.592823 | 4_1:+70954188 | Msa0569140:CDS |
| TTAATTTGTGGCAAGAAACA+GGG | 0.594294 | 4_1:+70955251 | Msa0569140:CDS |
| TGAGAGTATAGCTTGTCGCT+TGG | 0.598417 | 4_1:-70955158 | None:intergenic |
| TACATTAAGAAATGCTTAGG+TGG | 0.598713 | 4_1:+70954048 | Msa0569140:CDS |
| GTTGTAGCCAAGAACATGAA+GGG | 0.601267 | 4_1:+70955224 | Msa0569140:CDS |
| GGACCACCAAGAAACTTATG+TGG | 0.601552 | 4_1:-70954634 | None:intergenic |
| ATATCGGAGTAAAACCTGGA+TGG | 0.602940 | 4_1:+70955629 | Msa0569140:CDS |
| AATGTAGGACACATTATACA+TGG | 0.608096 | 4_1:+70954946 | Msa0569140:intron |
| TATCAGATCAGCTGTTCAAG+AGG | 0.608116 | 4_1:+70955417 | Msa0569140:CDS |
| GCAACAAAAGGGCCATGAAG+CGG | 0.616188 | 4_1:-70955289 | None:intergenic |
| TCTTCCTGCAATATTCCCTG+AGG | 0.621603 | 4_1:-70955961 | None:intergenic |
| AATAAACATTGATGTTGATG+TGG | 0.627365 | 4_1:+70955870 | Msa0569140:CDS |
| CATACTTGCGACAGTTATGT+GGG | 0.628274 | 4_1:+70953988 | Msa0569140:CDS |
| AAATTCAAACTCTAAAGTAG+AGG | 0.632298 | 4_1:-70955999 | None:intergenic |
| ACATGGAGAACATAGAAGAG+AGG | 0.633521 | 4_1:+70954963 | Msa0569140:CDS |
| CCGCCTCCACAAGTGGATGG+GGG | 0.634171 | 4_1:-70954712 | None:intergenic |
| ATTAGCTCAAAGTCAGAACA+AGG | 0.639611 | 4_1:+70953193 | Msa0569140:CDS |
| TTGTAGCCAAGAACATGAAG+GGG | 0.640366 | 4_1:+70955225 | Msa0569140:CDS |
| TTTGGCATTCAAGCTCGAGG+CGG | 0.643027 | 4_1:+70955331 | Msa0569140:CDS |
| GCTATGATCTCTGCTAACAA+TGG | 0.646161 | 4_1:-70953167 | None:intergenic |
| AGATTTGAATGATGCTCATG+GGG | 0.647917 | 4_1:-70954225 | None:intergenic |
| ATGTTGATGTGGCTGTGAGA+AGG | 0.654701 | 4_1:+70955881 | Msa0569140:CDS |
| CAAGAAACAGGGAACCAGAG+AGG | 0.655879 | 4_1:+70955262 | Msa0569140:CDS |
| AGAACAACTGTACATTAACA+AGG | 0.663044 | 4_1:+70955081 | Msa0569140:CDS |
| TCCGTATGTGGAGATTGACA+TGG | 0.668606 | 4_1:+70954570 | Msa0569140:CDS |
| TGTAGCCAAGAACATGAAGG+GGG | 0.677946 | 4_1:+70955226 | Msa0569140:CDS |
| GCAGAGAAAGATCCTAACAA+TGG | 0.679049 | 4_1:-70954363 | None:intergenic |
| TAGCAAAGAAGAAAGATGGG+TGG | 0.689815 | 4_1:+70954191 | Msa0569140:CDS |
| CCTGAGGTGGAAACTTAGGG+AGG | 0.697673 | 4_1:-70955945 | None:intergenic |
| CATGCCTTGTAATGAAACTG+TGG | 0.702110 | 4_1:+70953322 | Msa0569140:CDS |
| GCCTTGTAATGAAACTGTGG+AGG | 0.702923 | 4_1:+70953325 | Msa0569140:CDS |
| CCGTATGTGGAGATTGACAT+GGG | 0.708084 | 4_1:+70954571 | Msa0569140:CDS |
| ATAGAAGAGAGGGAAAATGG+AGG | 0.724805 | 4_1:+70954974 | Msa0569140:CDS |
| GTAGCCAAGAACATGAAGGG+GGG | 0.736383 | 4_1:+70955227 | Msa0569140:CDS |
| GTTTCTTAAAGGATTCAGGG+TGG | 0.746810 | 4_1:-70953286 | None:intergenic |
| AGATTGACATGGGATCAGGG+AGG | 0.805610 | 4_1:+70954581 | Msa0569140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATTTCATTGAATATA+AGG | - | chr4_1:70954903-70954922 | None:intergenic | 10.0% |
| !! | ATTATTATCATATACTTCAT+GGG | - | chr4_1:70953708-70953727 | None:intergenic | 15.0% |
| !! | TATTATTATCATATACTTCA+TGG | - | chr4_1:70953709-70953728 | None:intergenic | 15.0% |
| !! | ATTTAAGCTAAAAAATATCA+AGG | - | chr4_1:70955461-70955480 | None:intergenic | 15.0% |
| !!! | TTTCTTTTAAATGTTTTGAA+AGG | - | chr4_1:70955567-70955586 | None:intergenic | 15.0% |
| !!! | ACTAAAATTGTTTATTGTTT+TGG | + | chr4_1:70955588-70955607 | Msa0569140:intron | 15.0% |
| !!! | TTTTATTTGCCTAAAGTTTT+TGG | + | chr4_1:70953591-70953610 | Msa0569140:intron | 20.0% |
| !!! | ATACTATATTTGTTGTTCAT+TGG | - | chr4_1:70953657-70953676 | None:intergenic | 20.0% |
| !!! | TTAATTTGATTTGTCAATTG+TGG | + | chr4_1:70954490-70954509 | Msa0569140:intron | 20.0% |
| !! | TTGATTGACATAGTAATTAA+TGG | + | chr4_1:70954533-70954552 | Msa0569140:intron | 20.0% |
| !! | AACATTTCTAATCATTTACT+GGG | + | chr4_1:70955832-70955851 | Msa0569140:CDS | 20.0% |
| !!! | TTCTAATATGTTGCTTGTTT+TGG | - | chr4_1:70953246-70953265 | None:intergenic | 25.0% |
| ! | CTCTACAATATATGCTAATA+TGG | + | chr4_1:70953541-70953560 | Msa0569140:intron | 25.0% |
| ! | ACACCAAGATATATAATCAT+AGG | - | chr4_1:70953567-70953586 | None:intergenic | 25.0% |
| ! | TCAATTAAGTCTCTCAATAT+TGG | - | chr4_1:70953853-70953872 | None:intergenic | 25.0% |
| !!! | TCTTTTAGCTTTGTTATTCT+TGG | + | chr4_1:70953953-70953972 | Msa0569140:intron | 25.0% |
| ! | AAAAGACTTCAAGAAGTAAT+GGG | + | chr4_1:70954123-70954142 | Msa0569140:CDS | 25.0% |
| ! | ATCATTCAAATCTACTTTCT+TGG | + | chr4_1:70954235-70954254 | Msa0569140:CDS | 25.0% |
| !!! | ATGCTTTTTCACAAATACAA+AGG | + | chr4_1:70954432-70954451 | Msa0569140:CDS | 25.0% |
| !!! | AATTAATGGCTTTTGTTTAG+TGG | + | chr4_1:70954547-70954566 | Msa0569140:intron | 25.0% |
| !!! | GTGAAAGTTTTTTTGTTAGT+CGG | + | chr4_1:70954783-70954802 | Msa0569140:intron | 25.0% |
| !! | ATTTTTACTCTATGTACTCA+TGG | + | chr4_1:70955514-70955533 | Msa0569140:intron | 25.0% |
| !!! | GTTTATTGTTTTGGATCTTT+TGG | + | chr4_1:70955597-70955616 | Msa0569140:intron | 25.0% |
| !!! | ATAGAGTTTTTAGCTGTATA+TGG | + | chr4_1:70955712-70955731 | Msa0569140:CDS | 25.0% |
| ! | CAACATTTCTAATCATTTAC+TGG | + | chr4_1:70955831-70955850 | Msa0569140:CDS | 25.0% |
| ! | AATAAACATTGATGTTGATG+TGG | + | chr4_1:70955870-70955889 | Msa0569140:CDS | 25.0% |
| !!! | TTGTTTTGGATAAAGGTACA+TGG | - | chr4_1:70953232-70953251 | None:intergenic | 30.0% |
| !!! | ATGTTGCTTGTTTTGGATAA+AGG | - | chr4_1:70953239-70953258 | None:intergenic | 30.0% |
| CAAGTTTCTTAAAGGATTCA+GGG | - | chr4_1:70953292-70953311 | None:intergenic | 30.0% | |
| ACAAGTTTCTTAAAGGATTC+AGG | - | chr4_1:70953293-70953312 | None:intergenic | 30.0% | |
| ! | TGAATCCTTTAAGAAACTTG+TGG | + | chr4_1:70953292-70953311 | Msa0569140:CDS | 30.0% |
| CATTTCCACAAGTTTCTTAA+AGG | - | chr4_1:70953300-70953319 | None:intergenic | 30.0% | |
| ! | CTTTAAGAAACTTGTGGAAA+TGG | + | chr4_1:70953298-70953317 | Msa0569140:CDS | 30.0% |
| ! | ACAAGTTTTTGTCTTCCAAA+TGG | - | chr4_1:70953407-70953426 | None:intergenic | 30.0% |
| AATCATCTTCTTCCTTTCTA+TGG | + | chr4_1:70953485-70953504 | Msa0569140:CDS | 30.0% | |
| TGGCCTATGATTATATATCT+TGG | + | chr4_1:70953561-70953580 | Msa0569140:intron | 30.0% | |
| !! | TTATTAGAGGAAGTTTTGGT+TGG | - | chr4_1:70953826-70953845 | None:intergenic | 30.0% |
| ! | TCTCTTATTAGAGGAAGTTT+TGG | - | chr4_1:70953830-70953849 | None:intergenic | 30.0% |
| ! | CAATATTGGTCTCTTATTAG+AGG | - | chr4_1:70953839-70953858 | None:intergenic | 30.0% |
| ! | ATTTTCTCCATCAACCTAAA+TGG | - | chr4_1:70953891-70953910 | None:intergenic | 30.0% |
| GAGTACATTAAGAAATGCTT+AGG | + | chr4_1:70954045-70954064 | Msa0569140:CDS | 30.0% | |
| TACATTAAGAAATGCTTAGG+TGG | + | chr4_1:70954048-70954067 | Msa0569140:CDS | 30.0% | |
| ! | TACTTCTTGAAGTCTTTTGA+TGG | - | chr4_1:70954121-70954140 | None:intergenic | 30.0% |
| CAAAAGACTTCAAGAAGTAA+TGG | + | chr4_1:70954122-70954141 | Msa0569140:CDS | 30.0% | |
| ! | ATCCTTTCTCTAAGAATAGA+AGG | - | chr4_1:70954159-70954178 | None:intergenic | 30.0% |
| TAGATTTGAATGATGCTCAT+GGG | - | chr4_1:70954229-70954248 | None:intergenic | 30.0% | |
| ATTCAAATCTACTTTCTTGG+AGG | + | chr4_1:70954238-70954257 | Msa0569140:CDS | 30.0% | |
| TGGTCGATTAGTATCTTTAT+AGG | - | chr4_1:70954346-70954365 | None:intergenic | 30.0% | |
| AACACTGAGAAACTTTCTTT+AGG | - | chr4_1:70954809-70954828 | None:intergenic | 30.0% | |
| ! | TTTCTCAGTGTTGTTGATTA+GGG | + | chr4_1:70954817-70954836 | Msa0569140:intron | 30.0% |
| !! | AAATTAAAAGTACTCCCTAG+TGG | - | chr4_1:70954861-70954880 | None:intergenic | 30.0% |
| TCATTGAATATAAGGTGAAG+AGG | - | chr4_1:70954895-70954914 | None:intergenic | 30.0% | |
| TTCATATGTGTGATCAATGT+AGG | + | chr4_1:70954931-70954950 | Msa0569140:intron | 30.0% | |
| AATGTAGGACACATTATACA+TGG | + | chr4_1:70954946-70954965 | Msa0569140:intron | 30.0% | |
| TCACTGTTTGGATTATTTGA+GGG | - | chr4_1:70955003-70955022 | None:intergenic | 30.0% | |
| !!! | TTTTGGGTTAAAGAGTACAT+TGG | + | chr4_1:70955037-70955056 | Msa0569140:CDS | 30.0% |
| AGAACAACTGTACATTAACA+AGG | + | chr4_1:70955081-70955100 | Msa0569140:CDS | 30.0% | |
| TTTCCCAAAATCTTGATGTT+GGG | - | chr4_1:70955130-70955149 | None:intergenic | 30.0% | |
| ATCAATTGATGAGCAAGAAT+TGG | - | chr4_1:70955203-70955222 | None:intergenic | 30.0% | |
| !! | TTAATTTGTGGCAAGAAACA+GGG | + | chr4_1:70955251-70955270 | Msa0569140:CDS | 30.0% |
| !! | CATGCAGTTTTGTAATTTGT+AGG | - | chr4_1:70955542-70955561 | None:intergenic | 30.0% |
| CTACAAATTACAAAACTGCA+TGG | + | chr4_1:70955540-70955559 | Msa0569140:intron | 30.0% | |
| TTTCCTTATTACATGAGTGA+AGG | + | chr4_1:70955664-70955683 | Msa0569140:CDS | 30.0% | |
| TATATAGAGGAAAGAACCTT+TGG | - | chr4_1:70955738-70955757 | None:intergenic | 30.0% | |
| AATGAAGACTGAGAAATTTG+AGG | + | chr4_1:70955786-70955805 | Msa0569140:CDS | 30.0% | |
| GAACCAAACTTATTTAGATG+TGG | + | chr4_1:70955903-70955922 | Msa0569140:CDS | 30.0% | |
| !! | ACTCTAAAGTAGAGGATATT+GGG | - | chr4_1:70955994-70956013 | None:intergenic | 30.0% |
| !! | AACTCTAAAGTAGAGGATAT+TGG | - | chr4_1:70955995-70956014 | None:intergenic | 30.0% |
| ATTAGCTCAAAGTCAGAACA+AGG | + | chr4_1:70953193-70953212 | Msa0569140:CDS | 35.0% | |
| TATAGCGCTCCAAAAACTTT+AGG | - | chr4_1:70953603-70953622 | None:intergenic | 35.0% | |
| ! | TTTGGTTGGTCACAACTATT+TGG | - | chr4_1:70953812-70953831 | None:intergenic | 35.0% |
| GATTTGCAACCAAACCATTT+AGG | + | chr4_1:70953874-70953893 | Msa0569140:intron | 35.0% | |
| !! | AACCAAACCATTTAGGTTGA+TGG | + | chr4_1:70953881-70953900 | Msa0569140:intron | 35.0% |
| !! | TAGCTTTGTTATTCTTGGAC+AGG | + | chr4_1:70953958-70953977 | Msa0569140:intron | 35.0% |
| !! | AGCTTTGTTATTCTTGGACA+GGG | + | chr4_1:70953959-70953978 | Msa0569140:intron | 35.0% |
| ATTAAGAAATGCTTAGGTGG+TGG | + | chr4_1:70954051-70954070 | Msa0569140:CDS | 35.0% | |
| AATGATGCAATCATCTTCTG+TGG | + | chr4_1:70954078-70954097 | Msa0569140:CDS | 35.0% | |
| TGCCTTCTATTCTTAGAGAA+AGG | + | chr4_1:70954154-70954173 | Msa0569140:CDS | 35.0% | |
| CCTTAGCAAAGAAGAAAGAT+GGG | + | chr4_1:70954188-70954207 | Msa0569140:CDS | 35.0% | |
| AGATTTGAATGATGCTCATG+GGG | - | chr4_1:70954228-70954247 | None:intergenic | 35.0% | |
| GTAGATTTGAATGATGCTCA+TGG | - | chr4_1:70954230-70954249 | None:intergenic | 35.0% | |
| !! | AGATTGGCTTAGATGATGAA+GGG | + | chr4_1:70954283-70954302 | Msa0569140:CDS | 35.0% |
| GATACTAATCGACCATTGTT+AGG | + | chr4_1:70954351-70954370 | Msa0569140:CDS | 35.0% | |
| TCTGCTTGTAGTAATGTAAC+TGG | + | chr4_1:70954381-70954400 | Msa0569140:CDS | 35.0% | |
| !!! | CATGTTTTGATTTTGCAGCA+AGG | + | chr4_1:70954460-70954479 | Msa0569140:CDS | 35.0% |
| ! | CAAGAAACTTATGTGGACTA+AGG | - | chr4_1:70954630-70954649 | None:intergenic | 35.0% |
| CTTAGTCCACATAAGTTTCT+TGG | + | chr4_1:70954628-70954647 | Msa0569140:CDS | 35.0% | |
| !! | TTGTTCATCAAAAGTACTCC+CGG | - | chr4_1:70954667-70954686 | None:intergenic | 35.0% |
| ! | TGATGAACAAGGCTTTGTAT+CGG | + | chr4_1:70954677-70954696 | Msa0569140:CDS | 35.0% |
| TGTCAATGCATTCGATGAAA+AGG | + | chr4_1:70954747-70954766 | Msa0569140:CDS | 35.0% | |
| ! | GTTTCTCAGTGTTGTTGATT+AGG | + | chr4_1:70954816-70954835 | Msa0569140:intron | 35.0% |
| ! | TGTGATTTTATGCAACCACT+AGG | + | chr4_1:70954843-70954862 | Msa0569140:intron | 35.0% |
| ! | GTGATTTTATGCAACCACTA+GGG | + | chr4_1:70954844-70954863 | Msa0569140:intron | 35.0% |
| AACATAGAAGAGAGGGAAAA+TGG | + | chr4_1:70954971-70954990 | Msa0569140:CDS | 35.0% | |
| CACTGTTTGGATTATTTGAG+GGG | - | chr4_1:70955002-70955021 | None:intergenic | 35.0% | |
| CTCACTGTTTGGATTATTTG+AGG | - | chr4_1:70955004-70955023 | None:intergenic | 35.0% | |
| ! | AACCCCAACATCAAGATTTT+GGG | + | chr4_1:70955124-70955143 | Msa0569140:CDS | 35.0% |
| TTCCCAAAATCTTGATGTTG+GGG | - | chr4_1:70955129-70955148 | None:intergenic | 35.0% | |
| GTTTCCCAAAATCTTGATGT+TGG | - | chr4_1:70955131-70955150 | None:intergenic | 35.0% | |
| !! | CTTAATTTGTGGCAAGAAAC+AGG | + | chr4_1:70955250-70955269 | Msa0569140:CDS | 35.0% |
| !! | TGTTTTGGATCTTTTGGTAC+AGG | + | chr4_1:70955603-70955622 | Msa0569140:intron | 35.0% |
| !! | GTTTTGGATCTTTTGGTACA+GGG | + | chr4_1:70955604-70955623 | Msa0569140:intron | 35.0% |
| TCACCTTCACTCATGTAATA+AGG | - | chr4_1:70955670-70955689 | None:intergenic | 35.0% | |
| !! | TTTTAGCTGTATATGGCCAA+AGG | + | chr4_1:70955719-70955738 | Msa0569140:CDS | 35.0% |
| ! | GAAATTTGAGGCAGTAAACA+AGG | + | chr4_1:70955798-70955817 | Msa0569140:CDS | 35.0% |
| TGGCCACATCTAAATAAGTT+TGG | - | chr4_1:70955909-70955928 | None:intergenic | 35.0% | |
| GAGGCTACTAGCAATATATT+TGG | - | chr4_1:70955929-70955948 | None:intergenic | 35.0% | |
| GCTATGATCTCTGCTAACAA+TGG | - | chr4_1:70953170-70953189 | None:intergenic | 40.0% | |
| AGTCAGAACAAGGCCAAAAA+TGG | + | chr4_1:70953203-70953222 | Msa0569140:CDS | 40.0% | |
| GTCAGAACAAGGCCAAAAAT+GGG | + | chr4_1:70953204-70953223 | Msa0569140:CDS | 40.0% | |
| TCAGAACAAGGCCAAAAATG+GGG | + | chr4_1:70953205-70953224 | Msa0569140:CDS | 40.0% | |
| GTTTCTTAAAGGATTCAGGG+TGG | - | chr4_1:70953289-70953308 | None:intergenic | 40.0% | |
| CATGCCTTGTAATGAAACTG+TGG | + | chr4_1:70953322-70953341 | Msa0569140:CDS | 40.0% | |
| TCCTCCACAGTTTCATTACA+AGG | - | chr4_1:70953329-70953348 | None:intergenic | 40.0% | |
| !! | AGGAAAAACTGTGTTGGTTG+CGG | + | chr4_1:70953345-70953364 | Msa0569140:CDS | 40.0% |
| GCAGAGTTTGATTCTCCATT+TGG | + | chr4_1:70953389-70953408 | Msa0569140:CDS | 40.0% | |
| TGAAGTGACGTACCATAGAA+AGG | - | chr4_1:70953500-70953519 | None:intergenic | 40.0% | |
| CTCCATCAACCTAAATGGTT+TGG | - | chr4_1:70953886-70953905 | None:intergenic | 40.0% | |
| TCATACTTGCGACAGTTATG+TGG | + | chr4_1:70953987-70954006 | Msa0569140:CDS | 40.0% | |
| CATACTTGCGACAGTTATGT+GGG | + | chr4_1:70953988-70954007 | Msa0569140:CDS | 40.0% | |
| GCCTTAGCAAAGAAGAAAGA+TGG | + | chr4_1:70954187-70954206 | Msa0569140:CDS | 40.0% | |
| CCCATCTTTCTTCTTTGCTA+AGG | - | chr4_1:70954191-70954210 | None:intergenic | 40.0% | |
| TAGCAAAGAAGAAAGATGGG+TGG | + | chr4_1:70954191-70954210 | Msa0569140:CDS | 40.0% | |
| ! | GAAAGATGGGTGGTTTTTGT+AGG | + | chr4_1:70954201-70954220 | Msa0569140:CDS | 40.0% |
| !! | GAGATTGGCTTAGATGATGA+AGG | + | chr4_1:70954282-70954301 | Msa0569140:CDS | 40.0% |
| TGATGAAGGGTTGCTTGATA+TGG | + | chr4_1:70954296-70954315 | Msa0569140:CDS | 40.0% | |
| GCAGAGAAAGATCCTAACAA+TGG | - | chr4_1:70954366-70954385 | None:intergenic | 40.0% | |
| TTTGTTTAGTGGTCCGTATG+TGG | + | chr4_1:70954558-70954577 | Msa0569140:intron | 40.0% | |
| AGTCCACATAAGTTTCTTGG+TGG | + | chr4_1:70954631-70954650 | Msa0569140:CDS | 40.0% | |
| !!! | GGGAGTACTTTTGATGAACA+AGG | + | chr4_1:70954666-70954685 | Msa0569140:CDS | 40.0% |
| ACATGGAGAACATAGAAGAG+AGG | + | chr4_1:70954963-70954982 | Msa0569140:CDS | 40.0% | |
| CATGGAGAACATAGAAGAGA+GGG | + | chr4_1:70954964-70954983 | Msa0569140:CDS | 40.0% | |
| ATAGAAGAGAGGGAAAATGG+AGG | + | chr4_1:70954974-70954993 | Msa0569140:CDS | 40.0% | |
| !!! | TGAGAGCATCGTTAGCATTT+TGG | + | chr4_1:70955020-70955039 | Msa0569140:CDS | 40.0% |
| !!! | GAGAGCATCGTTAGCATTTT+GGG | + | chr4_1:70955021-70955040 | Msa0569140:CDS | 40.0% |
| CAAAATCTTGATGTTGGGGT+TGG | - | chr4_1:70955125-70955144 | None:intergenic | 40.0% | |
| ! | CAACCCCAACATCAAGATTT+TGG | + | chr4_1:70955123-70955142 | Msa0569140:CDS | 40.0% |
| AGTTGTAGCCAAGAACATGA+AGG | + | chr4_1:70955223-70955242 | Msa0569140:CDS | 40.0% | |
| GTTGTAGCCAAGAACATGAA+GGG | + | chr4_1:70955224-70955243 | Msa0569140:CDS | 40.0% | |
| TTGTAGCCAAGAACATGAAG+GGG | + | chr4_1:70955225-70955244 | Msa0569140:CDS | 40.0% | |
| TGAGCAAAGCTGCAACAAAA+GGG | - | chr4_1:70955303-70955322 | None:intergenic | 40.0% | |
| TTGAGCAAAGCTGCAACAAA+AGG | - | chr4_1:70955304-70955323 | None:intergenic | 40.0% | |
| ! | GCTTTGCTCAATGACCTTTT+TGG | + | chr4_1:70955313-70955332 | Msa0569140:CDS | 40.0% |
| TTGAGTAATTCGTGTCCGTA+AGG | - | chr4_1:70955373-70955392 | None:intergenic | 40.0% | |
| TATCAGATCAGCTGTTCAAG+AGG | + | chr4_1:70955417-70955436 | Msa0569140:CDS | 40.0% | |
| ! | CTTTTGGTACAGGGCTATAT+CGG | + | chr4_1:70955613-70955632 | Msa0569140:intron | 40.0% |
| ATATCGGAGTAAAACCTGGA+TGG | + | chr4_1:70955629-70955648 | Msa0569140:CDS | 40.0% | |
| AAACTAACTCTTGTCCATCC+AGG | - | chr4_1:70955646-70955665 | None:intergenic | 40.0% | |
| CTCAAGTGGAAGCTATATAG+AGG | - | chr4_1:70955751-70955770 | None:intergenic | 40.0% | |
| CTCTATATAGCTTCCACTTG+AGG | + | chr4_1:70955749-70955768 | Msa0569140:CDS | 40.0% | |
| TATAGCTTCCACTTGAGGAA+TGG | + | chr4_1:70955754-70955773 | Msa0569140:CDS | 40.0% | |
| GGGAATATTGCAGGAAGAAA+TGG | + | chr4_1:70955966-70955985 | Msa0569140:CDS | 40.0% | |
| ! | AGGTACATGGTCCCCATTTT+TGG | - | chr4_1:70953219-70953238 | None:intergenic | 45.0% |
| GCCTTGTAATGAAACTGTGG+AGG | + | chr4_1:70953325-70953344 | Msa0569140:CDS | 45.0% | |
| CTGTGGAGGAAAAACTGTGT+TGG | + | chr4_1:70953339-70953358 | Msa0569140:CDS | 45.0% | |
| TGGTTGCGGTCTCAAATCAT+AGG | + | chr4_1:70953359-70953378 | Msa0569140:CDS | 45.0% | |
| ACTTTCTTGGAGGCAGAGTT+TGG | + | chr4_1:70954248-70954267 | Msa0569140:CDS | 45.0% | |
| TTGGCAGAGGTTGTAGAGAT+TGG | + | chr4_1:70954267-70954286 | Msa0569140:CDS | 45.0% | |
| !! | AGCTTTGAAGCTGCAACTTG+AGG | + | chr4_1:70954320-70954339 | Msa0569140:CDS | 45.0% |
| TCCGTATGTGGAGATTGACA+TGG | + | chr4_1:70954570-70954589 | Msa0569140:CDS | 45.0% | |
| CCCATGTCAATCTCCACATA+CGG | - | chr4_1:70954574-70954593 | None:intergenic | 45.0% | |
| CCGTATGTGGAGATTGACAT+GGG | + | chr4_1:70954571-70954590 | Msa0569140:CDS | 45.0% | |
| TGGAGATTGACATGGGATCA+GGG | + | chr4_1:70954578-70954597 | Msa0569140:CDS | 45.0% | |
| GGACCACCAAGAAACTTATG+TGG | - | chr4_1:70954637-70954656 | None:intergenic | 45.0% | |
| !! | AAAAGTACTCCCGGAGAATC+AGG | - | chr4_1:70954658-70954677 | None:intergenic | 45.0% |
| CTAACGATGCTCTCACTGTT+TGG | - | chr4_1:70955015-70955034 | None:intergenic | 45.0% | |
| ! | TGAGAGTATAGCTTGTCGCT+TGG | - | chr4_1:70955161-70955180 | None:intergenic | 45.0% |
| TGTAGCCAAGAACATGAAGG+GGG | + | chr4_1:70955226-70955245 | Msa0569140:CDS | 45.0% | |
| ! | ATGAAGGGGGGCTTAATTTG+TGG | + | chr4_1:70955239-70955258 | Msa0569140:CDS | 45.0% |
| CTCGAGCTTGAATGCCAAAA+AGG | - | chr4_1:70955330-70955349 | None:intergenic | 45.0% | |
| !! | CTTTTTGGCATTCAAGCTCG+AGG | + | chr4_1:70955328-70955347 | Msa0569140:CDS | 45.0% |
| GGCTATATCGGAGTAAAACC+TGG | + | chr4_1:70955625-70955644 | Msa0569140:CDS | 45.0% | |
| TCCACTTGAGGAATGGAAGT+TGG | + | chr4_1:70955761-70955780 | Msa0569140:CDS | 45.0% | |
| TCCAACTTCCATTCCTCAAG+TGG | - | chr4_1:70955765-70955784 | None:intergenic | 45.0% | |
| ATGTTGATGTGGCTGTGAGA+AGG | + | chr4_1:70955881-70955900 | Msa0569140:CDS | 45.0% | |
| TTCCCTGAGGTGGAAACTTA+GGG | - | chr4_1:70955951-70955970 | None:intergenic | 45.0% | |
| ATTCCCTGAGGTGGAAACTT+AGG | - | chr4_1:70955952-70955971 | None:intergenic | 45.0% | |
| TCTTCCTGCAATATTCCCTG+AGG | - | chr4_1:70955964-70955983 | None:intergenic | 45.0% | |
| TACGCTGATCACACTGCTTC+TGG | + | chr4_1:70953428-70953447 | Msa0569140:CDS | 50.0% | |
| GCAATCATCTTCTGTGGCTC+AGG | + | chr4_1:70954084-70954103 | Msa0569140:CDS | 50.0% | |
| GTGGAGATTGACATGGGATC+AGG | + | chr4_1:70954577-70954596 | Msa0569140:CDS | 50.0% | |
| AGATTGACATGGGATCAGGG+AGG | + | chr4_1:70954581-70954600 | Msa0569140:CDS | 50.0% | |
| ATGGGATCAGGGAGGAATGA+TGG | + | chr4_1:70954589-70954608 | Msa0569140:CDS | 50.0% | |
| TGGGATCAGGGAGGAATGAT+GGG | + | chr4_1:70954590-70954609 | Msa0569140:CDS | 50.0% | |
| ! | TCTTGGTGGTCCTGATTCTC+CGG | + | chr4_1:70954645-70954664 | Msa0569140:CDS | 50.0% |
| GTAGCCAAGAACATGAAGGG+GGG | + | chr4_1:70955227-70955246 | Msa0569140:CDS | 50.0% | |
| TAAGCCCCCCTTCATGTTCT+TGG | - | chr4_1:70955234-70955253 | None:intergenic | 50.0% | |
| CAAGAAACAGGGAACCAGAG+AGG | + | chr4_1:70955262-70955281 | Msa0569140:CDS | 50.0% | |
| GCAACAAAAGGGCCATGAAG+CGG | - | chr4_1:70955292-70955311 | None:intergenic | 50.0% | |
| TTTGGCATTCAAGCTCGAGG+CGG | + | chr4_1:70955331-70955350 | Msa0569140:CDS | 50.0% | |
| TGTGCTTGTGCTGGACCTTA+CGG | + | chr4_1:70955355-70955374 | Msa0569140:CDS | 50.0% | |
| CTCCCTAAGTTTCCACCTCA+GGG | + | chr4_1:70955946-70955965 | Msa0569140:CDS | 50.0% | |
| TCCACCTCAGGGAATATTGC+AGG | + | chr4_1:70955957-70955976 | Msa0569140:CDS | 50.0% | |
| TCCTGCAATATTCCCTGAGG+TGG | - | chr4_1:70955961-70955980 | None:intergenic | 50.0% | |
| TTGGAGGCAGAGTTTGGCAG+AGG | + | chr4_1:70954254-70954273 | Msa0569140:CDS | 55.0% | |
| ! | CTTGGTGGTCCTGATTCTCC+GGG | + | chr4_1:70954646-70954665 | Msa0569140:CDS | 55.0% |
| TTCCGCCTCCACAAGTGGAT+GGG | - | chr4_1:70954717-70954736 | None:intergenic | 55.0% | |
| TTGGCATTCAAGCTCGAGGC+GGG | + | chr4_1:70955332-70955351 | Msa0569140:CDS | 55.0% | |
| CCTGAGGTGGAAACTTAGGG+AGG | - | chr4_1:70955948-70955967 | None:intergenic | 55.0% | |
| CCTCCCTAAGTTTCCACCTC+AGG | + | chr4_1:70955945-70955964 | Msa0569140:CDS | 55.0% | |
| TCTTCGCCCCCATCCACTTG+TGG | + | chr4_1:70954706-70954725 | Msa0569140:CDS | 60.0% | |
| TCCGCCTCCACAAGTGGATG+GGG | - | chr4_1:70954716-70954735 | None:intergenic | 60.0% | |
| GTTCCGCCTCCACAAGTGGA+TGG | - | chr4_1:70954718-70954737 | None:intergenic | 60.0% | |
| GACAGTTCCGCCTCCACAAG+TGG | - | chr4_1:70954722-70954741 | None:intergenic | 60.0% | |
| CATGAAGCGGCTTGCCTCTC+TGG | - | chr4_1:70955279-70955298 | None:intergenic | 60.0% | |
| CAGAGAGGCAAGCCGCTTCA+TGG | + | chr4_1:70955277-70955296 | Msa0569140:CDS | 60.0% | |
| TCGCCCCCATCCACTTGTGG+AGG | + | chr4_1:70954709-70954728 | Msa0569140:CDS | 65.0% | |
| CCGCCTCCACAAGTGGATGG+GGG | - | chr4_1:70954715-70954734 | None:intergenic | 65.0% | |
| CCCCCATCCACTTGTGGAGG+CGG | + | chr4_1:70954712-70954731 | Msa0569140:CDS | 65.0% | |
| CGAGGCGGGTGTGCTTGTGC+TGG | + | chr4_1:70955346-70955365 | Msa0569140:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 70953152 | 70956017 | 70953152 | ID=Msa0569140;Name=Msa0569140 |
| chr4_1 | mRNA | 70953152 | 70956017 | 70953152 | ID=Msa0569140-mRNA-1;Parent=Msa0569140;Name=Msa0569140-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0|0|1|1|1|5|0|645 |
| chr4_1 | exon | 70953152 | 70953506 | 70953152 | ID=Msa0569140-mRNA-1:exon:23938;Parent=Msa0569140-mRNA-1 |
| chr4_1 | exon | 70953980 | 70954481 | 70953980 | ID=Msa0569140-mRNA-1:exon:23939;Parent=Msa0569140-mRNA-1 |
| chr4_1 | exon | 70954567 | 70954768 | 70954567 | ID=Msa0569140-mRNA-1:exon:23940;Parent=Msa0569140-mRNA-1 |
| chr4_1 | exon | 70954953 | 70955438 | 70954953 | ID=Msa0569140-mRNA-1:exon:23941;Parent=Msa0569140-mRNA-1 |
| chr4_1 | exon | 70955625 | 70956017 | 70955625 | ID=Msa0569140-mRNA-1:exon:23942;Parent=Msa0569140-mRNA-1 |
| chr4_1 | CDS | 70953152 | 70953506 | 70953152 | ID=Msa0569140-mRNA-1:cds;Parent=Msa0569140-mRNA-1 |
| chr4_1 | CDS | 70953980 | 70954481 | 70953980 | ID=Msa0569140-mRNA-1:cds;Parent=Msa0569140-mRNA-1 |
| chr4_1 | CDS | 70954567 | 70954768 | 70954567 | ID=Msa0569140-mRNA-1:cds;Parent=Msa0569140-mRNA-1 |
| chr4_1 | CDS | 70954953 | 70955438 | 70954953 | ID=Msa0569140-mRNA-1:cds;Parent=Msa0569140-mRNA-1 |
| chr4_1 | CDS | 70955625 | 70956017 | 70955625 | ID=Msa0569140-mRNA-1:cds;Parent=Msa0569140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
