Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569490 | XP_013446884.1 | 95.268 | 634 | 30 | 0 | 1 | 634 | 1 | 634 | 0.0 | 1259 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569490 | sp|Q9S745|PAD4_ARATH | 38.843 | 605 | 278 | 15 | 9 | 611 | 6 | 520 | 1.43e-117 | 364 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569490 | A0A072TUT8 | 95.268 | 634 | 30 | 0 | 1 | 634 | 1 | 634 | 0.0 | 1259 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0569490 | Msa0705860 | 0.911368 | 6.580321e-83 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569490 | MtrunA17_Chr8g0384621 | 95.268 | 634 | 30 | 0 | 1 | 634 | 1 | 634 | 0.0 | 1259 |
| Msa0569490 | MtrunA17_Chr3g0118541 | 30.237 | 506 | 284 | 22 | 130 | 600 | 132 | 603 | 2.56e-50 | 184 |
| Msa0569490 | MtrunA17_Chr3g0118251 | 26.064 | 564 | 329 | 21 | 86 | 603 | 77 | 598 | 3.34e-48 | 178 |
| Msa0569490 | MtrunA17_Chr6g0451561 | 26.157 | 497 | 293 | 17 | 119 | 611 | 120 | 546 | 6.15e-30 | 124 |
| Msa0569490 | MtrunA17_Chr6g0451541 | 24.462 | 511 | 301 | 17 | 109 | 608 | 110 | 546 | 8.27e-27 | 115 |
| Msa0569490 | MtrunA17_Chr6g0451511 | 26.501 | 483 | 287 | 16 | 132 | 611 | 130 | 547 | 5.95e-26 | 112 |
| Msa0569490 | MtrunA17_Chr6g0451531 | 24.294 | 354 | 234 | 11 | 274 | 611 | 213 | 548 | 6.26e-22 | 100 |
| Msa0569490 | MtrunA17_Chr6g0451531 | 41.441 | 111 | 53 | 5 | 109 | 212 | 110 | 215 | 3.75e-14 | 75.5 |
| Msa0569490 | MtrunA17_Chr3g0107671 | 23.416 | 363 | 226 | 11 | 274 | 611 | 211 | 546 | 3.97e-19 | 91.3 |
| Msa0569490 | MtrunA17_Chr3g0107671 | 30.769 | 221 | 121 | 9 | 9 | 215 | 7 | 209 | 3.00e-12 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0569490 | AT3G52430.1 | 38.843 | 605 | 278 | 15 | 9 | 611 | 6 | 520 | 1.46e-118 | 364 |
| Msa0569490 | AT3G48080.1 | 24.849 | 664 | 397 | 25 | 20 | 629 | 9 | 624 | 1.80e-42 | 162 |
| Msa0569490 | AT3G48090.2 | 27.664 | 488 | 281 | 15 | 130 | 573 | 7 | 466 | 3.87e-42 | 160 |
| Msa0569490 | AT3G48090.1 | 27.664 | 488 | 281 | 15 | 130 | 573 | 115 | 574 | 1.47e-41 | 160 |
| Msa0569490 | AT5G14930.2 | 25.215 | 349 | 205 | 12 | 273 | 611 | 212 | 514 | 6.01e-24 | 106 |
| Msa0569490 | AT5G14930.2 | 37.168 | 113 | 62 | 4 | 101 | 209 | 108 | 215 | 4.95e-12 | 69.3 |
| Msa0569490 | AT5G14930.3 | 35.833 | 120 | 68 | 4 | 94 | 209 | 101 | 215 | 7.74e-12 | 66.2 |
Find 157 sgRNAs with CRISPR-Local
Find 424 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACACAAGATTCATGTTTC+TGG | 0.130571 | 4_1:+71386324 | Msa0569490:CDS |
| CGCAGACCCATTTGGCTCTT+TGG | 0.187191 | 4_1:-71386109 | None:intergenic |
| CACTGCTGTATTGGATTCTT+TGG | 0.212736 | 4_1:+71384971 | Msa0569490:CDS |
| TGCTGACTTCAAACATTCTT+TGG | 0.237811 | 4_1:-71385823 | None:intergenic |
| TAAATTTCCTGCTTCAGTTT+TGG | 0.252599 | 4_1:+71384874 | Msa0569490:CDS |
| TTGGAAACTGCAACACAAAA+TGG | 0.258094 | 4_1:+71384990 | Msa0569490:CDS |
| CCAAAAGGATGAAACAAAAT+TGG | 0.262221 | 4_1:-71385035 | None:intergenic |
| TTCACAATTCTATAAGCTTT+TGG | 0.268203 | 4_1:+71386133 | Msa0569490:CDS |
| GCTGCAAGCTTTCCATATTC+TGG | 0.269484 | 4_1:-71384915 | None:intergenic |
| GTTAGTTAATAAGCTGTCTT+TGG | 0.269951 | 4_1:+71385190 | Msa0569490:CDS |
| CTTTGTGTGTTAAGGCCTTA+AGG | 0.271523 | 4_1:+71386747 | Msa0569490:three_prime_UTR |
| TAGCATCTCTCTGCACTCTT+TGG | 0.276065 | 4_1:+71384652 | Msa0569490:CDS |
| GAATTGGCCATTCAATCTTC+TGG | 0.294919 | 4_1:+71385278 | Msa0569490:CDS |
| CATCGAGTTGATTCAAAATA+AGG | 0.297856 | 4_1:+71386454 | Msa0569490:CDS |
| ATCTTCTGGTTTAGCAAATC+AGG | 0.300186 | 4_1:+71385292 | Msa0569490:CDS |
| TCCATGAATTCACCAGAATA+TGG | 0.306371 | 4_1:+71384903 | Msa0569490:CDS |
| GTTACAAACTCGCTAGATTC+TGG | 0.311709 | 4_1:+71386036 | Msa0569490:CDS |
| TTTGTGTGTTAAGGCCTTAA+GGG | 0.319263 | 4_1:+71386748 | Msa0569490:three_prime_UTR |
| AAGGAAACTTGCATTTATAA+AGG | 0.331288 | 4_1:-71386727 | None:intergenic |
| AATTATATTAAGTGTTTGTT+TGG | 0.333196 | 4_1:+71386781 | Msa0569490:three_prime_UTR |
| GATTTCTACGCCACTGTTGC+CGG | 0.333614 | 4_1:+71379760 | Msa0569490:CDS |
| TCCATATTCTGGTGAATTCA+TGG | 0.335110 | 4_1:-71384904 | None:intergenic |
| GGAGGTGTCTATTGATGTTC+TGG | 0.338679 | 4_1:+71386475 | Msa0569490:CDS |
| TGGGAAGTGTGGGGTGTAAT+AGG | 0.342867 | 4_1:-71384849 | None:intergenic |
| CAGAGGTTTCCTCAACAGTT+TGG | 0.355585 | 4_1:+71386566 | Msa0569490:CDS |
| CCAGTAATGTGCATCACTTT+TGG | 0.357234 | 4_1:+71384711 | Msa0569490:CDS |
| CCAAAAGTGATGCACATTAC+TGG | 0.369715 | 4_1:-71384711 | None:intergenic |
| ATTGAGGAACATTTGAAGTA+TGG | 0.371973 | 4_1:+71385164 | Msa0569490:CDS |
| AACACAAGATTCATGTTTCT+GGG | 0.376704 | 4_1:+71386325 | Msa0569490:CDS |
| CAAGTTTCCTTTGTGTGTTA+AGG | 0.389729 | 4_1:+71386739 | Msa0569490:three_prime_UTR |
| ATGTTACCATTTCAGGTGTT+GGG | 0.393313 | 4_1:+71384567 | Msa0569490:intron |
| ACAACCTTGGCTAAGGATAA+TGG | 0.399983 | 4_1:-71385888 | None:intergenic |
| GCAAGGGAAGCATTTAGAAA+AGG | 0.410838 | 4_1:+71386187 | Msa0569490:CDS |
| ATAGGTGCAAATAGCAATCT+TGG | 0.413192 | 4_1:-71384831 | None:intergenic |
| TGATAAACAAGATGATCAAA+TGG | 0.416330 | 4_1:+71385950 | Msa0569490:CDS |
| TTGAAGTCAGCAAGGAGAAT+TGG | 0.417825 | 4_1:+71385834 | Msa0569490:CDS |
| AGCTTTCTCCGGCGTTCAAA+TGG | 0.431375 | 4_1:+71379871 | Msa0569490:CDS |
| TTGGAGAACGTTGGAGGCGT+TGG | 0.432204 | 4_1:+71379916 | Msa0569490:CDS |
| TATTTGTTTGTTTCAGAAGA+AGG | 0.432830 | 4_1:+71385062 | Msa0569490:CDS |
| GTGATCACTGGCCATTCCAT+TGG | 0.434181 | 4_1:+71384621 | Msa0569490:CDS |
| GACTTCAAACATTCTTTGGC+TGG | 0.437850 | 4_1:-71385819 | None:intergenic |
| AGTTTGGACGATTCCTTGAC+GGG | 0.438080 | 4_1:+71386582 | Msa0569490:CDS |
| CCGGCGTTCAAATGGCCGGC+GGG | 0.439468 | 4_1:+71379879 | Msa0569490:CDS |
| TGTTCCTCAATACTATTAGT+TGG | 0.441607 | 4_1:-71385152 | None:intergenic |
| CTATGAGGCAGGGCTTGAAT+TGG | 0.443387 | 4_1:+71385262 | Msa0569490:CDS |
| CGAGTTGTTCACTGCTGTAT+TGG | 0.444240 | 4_1:+71384962 | Msa0569490:CDS |
| ACTGAAGCAGGAAATTTAGC+TGG | 0.446311 | 4_1:-71384869 | None:intergenic |
| CCTGCCTCATAGCTTGAGTT+AGG | 0.446400 | 4_1:-71385251 | None:intergenic |
| TGAAGTTTCGTTTGCAGCCA+TGG | 0.448391 | 4_1:-71379513 | None:intergenic |
| TGCTAAACCAGAAGATTGAA+TGG | 0.450222 | 4_1:-71385285 | None:intergenic |
| AATAAGAAGAACACTATGCT+TGG | 0.452445 | 4_1:+71385221 | Msa0569490:CDS |
| TTACAAACTCGCTAGATTCT+GGG | 0.453899 | 4_1:+71386037 | Msa0569490:CDS |
| CGCCACTGTTGCCGGAGTCA+TGG | 0.457450 | 4_1:+71379768 | Msa0569490:CDS |
| TTGTTCCTTAGTACTTACTT+TGG | 0.465562 | 4_1:+71386609 | Msa0569490:exon |
| CTTTGACCAAAGAGCCAAAT+GGG | 0.467650 | 4_1:+71386103 | Msa0569490:CDS |
| CAAGGGAAGCATTTAGAAAA+GGG | 0.469125 | 4_1:+71386188 | Msa0569490:CDS |
| GAGGTTGACGGCTGAGGCGT+TGG | 0.469518 | 4_1:-71379807 | None:intergenic |
| GGCGTTCAAATGGCCGGCGG+GGG | 0.470945 | 4_1:+71379881 | Msa0569490:CDS |
| GAAGCAAGGGATTGGTTGAA+TGG | 0.473961 | 4_1:+71386359 | Msa0569490:CDS |
| GTTTGAGAGCAGTGAGATGC+TGG | 0.474417 | 4_1:+71379727 | Msa0569490:CDS |
| GTGGAGAAGAAGAACGAGTA+AGG | 0.474768 | 4_1:-71379458 | None:intergenic |
| AATTAATGAAAACACCCTTA+AGG | 0.477228 | 4_1:-71386762 | None:intergenic |
| CACAAAACTGCGGAGGTTGA+CGG | 0.478645 | 4_1:-71379819 | None:intergenic |
| TTGTGAAGCGCAGACCCATT+TGG | 0.479246 | 4_1:-71386117 | None:intergenic |
| GGAATTCAAGTTACAGTACA+TGG | 0.484225 | 4_1:+71386501 | Msa0569490:CDS |
| TTCTCCGGCGTTCAAATGGC+CGG | 0.487074 | 4_1:+71379875 | Msa0569490:CDS |
| AAATAGAATTGTACAAAAGT+TGG | 0.490647 | 4_1:+71385925 | Msa0569490:CDS |
| CCTAACTCAAGCTATGAGGC+AGG | 0.491877 | 4_1:+71385251 | Msa0569490:CDS |
| AGGATGAAGAGATGGATTTG+AGG | 0.493288 | 4_1:-71384686 | None:intergenic |
| GGAAATTTAGCTGGGAAGTG+TGG | 0.493976 | 4_1:-71384860 | None:intergenic |
| AATGATTTGTTACCAAGTAA+TGG | 0.494546 | 4_1:-71384738 | None:intergenic |
| CAGTTTGGACGATTCCTTGA+CGG | 0.494983 | 4_1:+71386581 | Msa0569490:CDS |
| GAAATTTAGCTGGGAAGTGT+GGG | 0.500573 | 4_1:-71384859 | None:intergenic |
| ATCCCGGAGTGAACCTTCAC+CGG | 0.500741 | 4_1:-71379995 | None:intergenic |
| GTTGACTTCCATGTGTACTT+TGG | 0.507093 | 4_1:-71386006 | None:intergenic |
| AAATTGGGGTCTTTGTCTTG+TGG | 0.510453 | 4_1:-71379477 | None:intergenic |
| TTAGAAAAGGGTCATTACAT+AGG | 0.510656 | 4_1:+71386200 | Msa0569490:CDS |
| ACTGCGGAGGTTGACGGCTG+AGG | 0.515153 | 4_1:-71379813 | None:intergenic |
| TAACAAGTTGGATACATTGT+GGG | 0.518232 | 4_1:+71386403 | Msa0569490:CDS |
| ACAAACAAATAGTTTCCAAA+AGG | 0.522629 | 4_1:-71385050 | None:intergenic |
| ATAAGAAGAACACTATGCTT+GGG | 0.524144 | 4_1:+71385222 | Msa0569490:CDS |
| GAAAGGTACAACCTTGGCTA+AGG | 0.525581 | 4_1:-71385895 | None:intergenic |
| AGTGATGCACATTACTGGTA+AGG | 0.527882 | 4_1:-71384706 | None:intergenic |
| GATAAACAAGATGATCAAAT+GGG | 0.529969 | 4_1:+71385951 | Msa0569490:CDS |
| TGAATCCAAAGTAAGTACTA+AGG | 0.531191 | 4_1:-71386614 | None:intergenic |
| AAAATGAGTTATTTAGCTGA+AGG | 0.533446 | 4_1:-71386683 | None:intergenic |
| ATCACTGGCCATTCCATTGG+AGG | 0.534637 | 4_1:+71384624 | Msa0569490:CDS |
| ACAAAATCTCTTGTGATCAC+TGG | 0.538265 | 4_1:+71384609 | Msa0569490:CDS |
| AGAAGCACCAAAACTGAAGC+AGG | 0.539328 | 4_1:-71384881 | None:intergenic |
| GTCGTGTATGTAGCTTTCTC+CGG | 0.540805 | 4_1:+71379860 | Msa0569490:CDS |
| GAATAAGGAAGAGGAGGAGC+CGG | 0.542802 | 4_1:+71379976 | Msa0569490:CDS |
| AGCCGGTGAAGGTTCACTCC+GGG | 0.543118 | 4_1:+71379993 | Msa0569490:CDS |
| TTCTCCAACTAATAGTATTG+AGG | 0.547084 | 4_1:+71385148 | Msa0569490:CDS |
| CATTCCTAACTCAAGCTATG+AGG | 0.547551 | 4_1:+71385247 | Msa0569490:CDS |
| TGAAAGAGACACTAACAAGT+TGG | 0.548762 | 4_1:+71386391 | Msa0569490:CDS |
| AAGCATAGAGAAGTTACTAT+TGG | 0.548974 | 4_1:+71386266 | Msa0569490:CDS |
| GGAAGAGGAGGAGCCGGTGA+AGG | 0.549163 | 4_1:+71379982 | Msa0569490:CDS |
| ATAGCTGACTATTATAAGCA+AGG | 0.553105 | 4_1:+71386170 | Msa0569490:CDS |
| ACTTTGACCAAAGAGCCAAA+TGG | 0.553587 | 4_1:+71386102 | Msa0569490:CDS |
| CTCCATGACTCCGGCAACAG+TGG | 0.554285 | 4_1:-71379770 | None:intergenic |
| GCCTCCAACGTTCTCCAACT+CGG | 0.557543 | 4_1:-71379911 | None:intergenic |
| GGGCTAAAGTTGAAGAAGCA+AGG | 0.559451 | 4_1:+71386345 | Msa0569490:CDS |
| CGGCGTTCAAATGGCCGGCG+GGG | 0.560031 | 4_1:+71379880 | Msa0569490:CDS |
| TACTGGTAAGGATGAAGAGA+TGG | 0.560874 | 4_1:-71384694 | None:intergenic |
| TCCGAGTTGGAGAACGTTGG+AGG | 0.563017 | 4_1:+71379910 | Msa0569490:CDS |
| GACGCGTCGGAATAAGGAAG+AGG | 0.563109 | 4_1:+71379967 | Msa0569490:CDS |
| TATGACACATTCAAAACAAG+AGG | 0.563778 | 4_1:+71385978 | Msa0569490:CDS |
| AAGTTGAAGAAGCAAGGGAT+TGG | 0.565472 | 4_1:+71386351 | Msa0569490:CDS |
| ATTTAAGAAAATTAAAACCA+TGG | 0.565642 | 4_1:+71379496 | Msa0569490:exon |
| AATTCTATTTGGGCTCTGAA+AGG | 0.568089 | 4_1:-71385912 | None:intergenic |
| GGCTAAAGTTGAAGAAGCAA+GGG | 0.572028 | 4_1:+71386346 | Msa0569490:CDS |
| CTGAAGCAGGAAATTTAGCT+GGG | 0.575938 | 4_1:-71384868 | None:intergenic |
| TAGCTGACTATTATAAGCAA+GGG | 0.576347 | 4_1:+71386171 | Msa0569490:CDS |
| GGCTCTGAAAGGTACAACCT+TGG | 0.576657 | 4_1:-71385901 | None:intergenic |
| TCCGGCGTTCAAATGGCCGG+CGG | 0.577280 | 4_1:+71379878 | Msa0569490:CDS |
| TTTCAACTCAATCCAAAACC+AGG | 0.577607 | 4_1:+71380039 | Msa0569490:CDS |
| TGTCTATTGATGTTCTGGCT+AGG | 0.577873 | 4_1:+71386480 | Msa0569490:CDS |
| CTATAGCTCCTCCAATGGAA+TGG | 0.580997 | 4_1:-71384632 | None:intergenic |
| AGAAGAAGGTGCTTTATGTG+TGG | 0.588828 | 4_1:+71385076 | Msa0569490:CDS |
| AGAATCTAGCGAGTTTGTAA+CGG | 0.599056 | 4_1:-71386034 | None:intergenic |
| GAGCCGGTGAAGGTTCACTC+CGG | 0.599232 | 4_1:+71379992 | Msa0569490:CDS |
| CCCGCCGGCCATTTGAACGC+CGG | 0.603974 | 4_1:-71379879 | None:intergenic |
| AGGAATCGTCCAAACTGTTG+AGG | 0.608499 | 4_1:-71386575 | None:intergenic |
| GCTCTTTGGTCAAAGTCATG+TGG | 0.609036 | 4_1:-71386095 | None:intergenic |
| CCTACCATTATCCTTAGCCA+AGG | 0.611121 | 4_1:+71385884 | Msa0569490:CDS |
| CTGCACATCCTCCATGACTC+CGG | 0.611145 | 4_1:-71379779 | None:intergenic |
| TAATAGTCAGCTATATCAAG+TGG | 0.612422 | 4_1:-71386161 | None:intergenic |
| AGAAAAGAGATTCAACATCC+CGG | 0.615019 | 4_1:-71380011 | None:intergenic |
| AAGGAACAACTTCCCCGTCA+AGG | 0.619923 | 4_1:-71386595 | None:intergenic |
| AACAAGTTGGATACATTGTG+GGG | 0.621080 | 4_1:+71386404 | Msa0569490:CDS |
| GAGGCGTTGGAAAGCATCGG+TGG | 0.621738 | 4_1:+71379929 | Msa0569490:CDS |
| CTTAAGGCCTTAACACACAA+AGG | 0.624349 | 4_1:-71386746 | None:intergenic |
| GCGTCGGAATAAGGAAGAGG+AGG | 0.625973 | 4_1:+71379970 | Msa0569490:CDS |
| GTCATGGAGGATGTGCAGCA+AGG | 0.626129 | 4_1:+71379784 | Msa0569490:CDS |
| CGAGTTGATTCAAAATAAGG+AGG | 0.626279 | 4_1:+71386457 | Msa0569490:CDS |
| TTGGAGGCGTTGGAAAGCAT+CGG | 0.626385 | 4_1:+71379926 | Msa0569490:CDS |
| CTAACAAGTTGGATACATTG+TGG | 0.627756 | 4_1:+71386402 | Msa0569490:CDS |
| CTAACTCAAGCTATGAGGCA+GGG | 0.629931 | 4_1:+71385252 | Msa0569490:CDS |
| AGATGCTATAGCTCCTCCAA+TGG | 0.633855 | 4_1:-71384637 | None:intergenic |
| AAGAATGTTTGAAGTCAGCA+AGG | 0.636050 | 4_1:+71385826 | Msa0569490:CDS |
| AGGATCTGCCAAAGTACACA+TGG | 0.636828 | 4_1:+71385998 | Msa0569490:CDS |
| CCTTGGCTAAGGATAATGGT+AGG | 0.638007 | 4_1:-71385884 | None:intergenic |
| AATTGAGAGCAAATGTGCAG+AGG | 0.648949 | 4_1:+71386549 | Msa0569490:CDS |
| CACTGTTGCCGGAGTCATGG+AGG | 0.649979 | 4_1:+71379771 | Msa0569490:CDS |
| CAATACAGCAGTGAACAACT+CGG | 0.652508 | 4_1:-71384961 | None:intergenic |
| TTCAAGTTACAGTACATGGG+TGG | 0.653265 | 4_1:+71386505 | Msa0569490:CDS |
| TAGGACATGGTAGAGCGAGA+AGG | 0.658016 | 4_1:+71386219 | Msa0569490:CDS |
| AAGGGTCATTACATAGGACA+TGG | 0.658297 | 4_1:+71386206 | Msa0569490:CDS |
| GGATCCGAGTTGGAGAACGT+TGG | 0.659368 | 4_1:+71379907 | Msa0569490:CDS |
| GAATTCAAGTTACAGTACAT+GGG | 0.663582 | 4_1:+71386502 | Msa0569490:CDS |
| AAATTTAGCTGGGAAGTGTG+GGG | 0.679928 | 4_1:-71384858 | None:intergenic |
| TTCCGACGCGTCGAAAACAG+CGG | 0.681767 | 4_1:-71379956 | None:intergenic |
| GCTCCACCACAAAACTGCGG+AGG | 0.686039 | 4_1:-71379826 | None:intergenic |
| ACAAGTTGGATACATTGTGG+GGG | 0.704955 | 4_1:+71386405 | Msa0569490:CDS |
| ATCATCTTAATAATTGTGTG+TGG | 0.707897 | 4_1:-71385104 | None:intergenic |
| CATGCTCCACCACAAAACTG+CGG | 0.743961 | 4_1:-71379829 | None:intergenic |
| GTTTGGACGATTCCTTGACG+GGG | 0.758706 | 4_1:+71386583 | Msa0569490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTTTAAATGAATTGAA+AGG | - | chr4_1:71380113-71380132 | None:intergenic | 10.0% |
| !!! | TCATGTTTTTTTTTTTTTTA+AGG | + | chr4_1:71381041-71381060 | Msa0569490:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTAAGGAT+AGG | + | chr4_1:71381046-71381065 | Msa0569490:intron | 10.0% |
| !! | ATTTATGATTTAATCTATTA+TGG | + | chr4_1:71381909-71381928 | Msa0569490:intron | 10.0% |
| !! | GAATATATTTAAAAATTATG+CGG | + | chr4_1:71381931-71381950 | Msa0569490:intron | 10.0% |
| !! | AATATATTTAAAAATTATGC+GGG | + | chr4_1:71381932-71381951 | Msa0569490:intron | 10.0% |
| !! | TAGAATTAAAAAATAAATGT+TGG | + | chr4_1:71382270-71382289 | Msa0569490:intron | 10.0% |
| !!! | TTTTAATGTTATTTATATAC+TGG | + | chr4_1:71382414-71382433 | Msa0569490:intron | 10.0% |
| !! | AATATAAAACATTAAACTTA+AGG | - | chr4_1:71382465-71382484 | None:intergenic | 10.0% |
| !! | TTTATTATGAAATAGTAAAA+CGG | - | chr4_1:71382964-71382983 | None:intergenic | 10.0% |
| !!! | TTTCTTTTTTTCTTTTTTTT+AGG | - | chr4_1:71383215-71383234 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTTTGTTTTTGTA+AGG | - | chr4_1:71383535-71383554 | None:intergenic | 10.0% |
| !!! | CAAAATTAGTTTAAAATATT+TGG | - | chr4_1:71384167-71384186 | None:intergenic | 10.0% |
| !!! | TTTAAAATCACTTTTTTTTT+TGG | + | chr4_1:71384191-71384210 | Msa0569490:intron | 10.0% |
| !!! | GTTTTAATTTTCTTAAATTG+GGG | - | chr4_1:71379494-71379513 | None:intergenic | 15.0% |
| !!! | GGTTTTAATTTTCTTAAATT+GGG | - | chr4_1:71379495-71379514 | None:intergenic | 15.0% |
| !!! | TGGTTTTAATTTTCTTAAAT+TGG | - | chr4_1:71379496-71379515 | None:intergenic | 15.0% |
| !! | ATTTAAGAAAATTAAAACCA+TGG | + | chr4_1:71379496-71379515 | Msa0569490:exon | 15.0% |
| !!! | TTTCATTTTATATTATTTGG+AGG | + | chr4_1:71380070-71380089 | Msa0569490:intron | 15.0% |
| !!! | TTATTTTATATTAAGAGAAG+AGG | - | chr4_1:71380212-71380231 | None:intergenic | 15.0% |
| !!! | GACATGTTAAATTTTAAATT+TGG | + | chr4_1:71380434-71380453 | Msa0569490:intron | 15.0% |
| !! | AAAAATAGAAAAAGATTCAT+AGG | - | chr4_1:71380496-71380515 | None:intergenic | 15.0% |
| !! | TCTAAATGTTACTAAAATAT+AGG | + | chr4_1:71380538-71380557 | Msa0569490:intron | 15.0% |
| !! | TAATTCACTTGATTAAATTA+GGG | - | chr4_1:71380667-71380686 | None:intergenic | 15.0% |
| !!! | CTTTTATTTTTATTAGGAAT+CGG | + | chr4_1:71380760-71380779 | Msa0569490:intron | 15.0% |
| !!! | TTTTCTTGGATATTTTTTTT+GGG | + | chr4_1:71380903-71380922 | Msa0569490:intron | 15.0% |
| !!! | AACATGATTGTAAATTTTAT+AGG | + | chr4_1:71381018-71381037 | Msa0569490:intron | 15.0% |
| !!! | TTTTTTGCATTTTTAAAAGT+TGG | + | chr4_1:71381149-71381168 | Msa0569490:intron | 15.0% |
| !! | ATATAAATAGGAAAATTCTA+TGG | + | chr4_1:71381298-71381317 | Msa0569490:intron | 15.0% |
| !!! | CAATTTTCTTAAAAAAATAG+CGG | - | chr4_1:71381987-71382006 | None:intergenic | 15.0% |
| !!! | GTTACTAGTATAATATATTT+TGG | - | chr4_1:71383318-71383337 | None:intergenic | 15.0% |
| !! | AAAAAAGATACTTCTATTAA+GGG | - | chr4_1:71383507-71383526 | None:intergenic | 15.0% |
| !! | CTTTAAATTAGAATATTCTT+TGG | + | chr4_1:71384113-71384132 | Msa0569490:intron | 15.0% |
| !!! | TTTTTTCATTACATTCAAAT+TGG | + | chr4_1:71385399-71385418 | Msa0569490:intron | 15.0% |
| !!! | TTTTTCATTACATTCAAATT+GGG | + | chr4_1:71385400-71385419 | Msa0569490:intron | 15.0% |
| !! | TATTCACAATATTAATTAAG+TGG | - | chr4_1:71385487-71385506 | None:intergenic | 15.0% |
| !! | AATTATATTAAGTGTTTGTT+TGG | + | chr4_1:71386781-71386800 | Msa0569490:three_prime_UTR | 15.0% |
| !! | TAAAATGAAAAAAACAAACC+TGG | - | chr4_1:71380060-71380079 | None:intergenic | 20.0% |
| !!! | ATTGTTTGTCATTTTGTTTT+TGG | + | chr4_1:71380290-71380309 | Msa0569490:intron | 20.0% |
| !! | TTAGTAACATTTAGATTCAT+AGG | - | chr4_1:71380533-71380552 | None:intergenic | 20.0% |
| !! | ATGTACGATAATATACATTT+AGG | - | chr4_1:71380574-71380593 | None:intergenic | 20.0% |
| !! | CTAATTCACTTGATTAAATT+AGG | - | chr4_1:71380668-71380687 | None:intergenic | 20.0% |
| !!! | GATATTTAGAATTCGAAATT+CGG | - | chr4_1:71380741-71380760 | None:intergenic | 20.0% |
| !! | AAAAAAATATCCAAGAAAAG+AGG | - | chr4_1:71380902-71380921 | None:intergenic | 20.0% |
| !!! | CTTTTCTTGGATATTTTTTT+TGG | + | chr4_1:71380902-71380921 | Msa0569490:intron | 20.0% |
| !! | TTGAAAGAGACAATATAAAT+AGG | + | chr4_1:71381286-71381305 | Msa0569490:intron | 20.0% |
| !! | GTATGTAGTTATAAAGAAAA+GGG | - | chr4_1:71382104-71382123 | None:intergenic | 20.0% |
| !! | TGTATGTAGTTATAAAGAAA+AGG | - | chr4_1:71382105-71382124 | None:intergenic | 20.0% |
| !!! | TGAAACTATCTTTCTTTTTT+AGG | + | chr4_1:71382167-71382186 | Msa0569490:intron | 20.0% |
| !!! | GAAACTATCTTTCTTTTTTA+GGG | + | chr4_1:71382168-71382187 | Msa0569490:intron | 20.0% |
| !! | ATAAAACATTAAACTTAAGG+TGG | - | chr4_1:71382462-71382481 | None:intergenic | 20.0% |
| !! | ACTCTATAAAATAAACATAG+AGG | - | chr4_1:71382592-71382611 | None:intergenic | 20.0% |
| !! | TAGCAAATTAAACATATATG+TGG | + | chr4_1:71382611-71382630 | Msa0569490:intron | 20.0% |
| !! | ATTATCTAATATCTACTTGA+TGG | - | chr4_1:71383185-71383204 | None:intergenic | 20.0% |
| !!! | TGATATGATAAATAGTTTTC+AGG | + | chr4_1:71383478-71383497 | Msa0569490:intron | 20.0% |
| !! | CAAAAAAGATACTTCTATTA+AGG | - | chr4_1:71383508-71383527 | None:intergenic | 20.0% |
| !! | ATTTGTATTTCTCCATATAT+GGG | - | chr4_1:71383827-71383846 | None:intergenic | 20.0% |
| !! | TATTTGTATTTCTCCATATA+TGG | - | chr4_1:71383828-71383847 | None:intergenic | 20.0% |
| !!! | GACATTTTATATGGAATTTT+AGG | - | chr4_1:71384353-71384372 | None:intergenic | 20.0% |
| !! | TTCCATATAAAATGTCATTA+CGG | + | chr4_1:71384357-71384376 | Msa0569490:intron | 20.0% |
| !! | TAGGTTATTATTAACATTCT+AGG | - | chr4_1:71384512-71384531 | None:intergenic | 20.0% |
| !! | AAAATTTATGTTACCATTTC+AGG | + | chr4_1:71384560-71384579 | Msa0569490:intron | 20.0% |
| !!! | ACAATTATGATTTAAAACCT+TGG | - | chr4_1:71385444-71385463 | None:intergenic | 20.0% |
| !!! | AAGGTTTTAAATCATAATTG+TGG | + | chr4_1:71385443-71385462 | Msa0569490:intron | 20.0% |
| !!! | ACTTTTGTACAATTCTATTT+GGG | - | chr4_1:71385925-71385944 | None:intergenic | 20.0% |
| !!! | AACTTTTGTACAATTCTATT+TGG | - | chr4_1:71385926-71385945 | None:intergenic | 20.0% |
| !! | AAATAGAATTGTACAAAAGT+TGG | + | chr4_1:71385925-71385944 | Msa0569490:CDS | 20.0% |
| ! | TTTGAAAATTAGTTAGTGAG+TGG | - | chr4_1:71379567-71379586 | None:intergenic | 25.0% |
| !!! | TTTTTGAAGCATTCTGAATT+AGG | + | chr4_1:71380265-71380284 | Msa0569490:intron | 25.0% |
| ! | AATTCACACACTCAAATTAT+TGG | + | chr4_1:71380391-71380410 | Msa0569490:intron | 25.0% |
| ! | TAAGTTAATTCGTCTTTAAG+CGG | - | chr4_1:71380710-71380729 | None:intergenic | 25.0% |
| !!! | TTGATAAAAGAAAGCACTAA+TGG | + | chr4_1:71380991-71381010 | Msa0569490:intron | 25.0% |
| !! | AATGAATTGATGATACTATG+AGG | - | chr4_1:71381425-71381444 | None:intergenic | 25.0% |
| ! | TATATGTGGTAGACATTTAA+TGG | + | chr4_1:71382625-71382644 | Msa0569490:intron | 25.0% |
| !!! | AGTTTAAGTCCTTTTAAAGA+TGG | + | chr4_1:71382679-71382698 | Msa0569490:intron | 25.0% |
| !! | ATGGGTTTGAATTTTTATTG+GGG | - | chr4_1:71383040-71383059 | None:intergenic | 25.0% |
| !!! | GATGGGTTTGAATTTTTATT+GGG | - | chr4_1:71383041-71383060 | None:intergenic | 25.0% |
| !!! | TGATGGGTTTGAATTTTTAT+TGG | - | chr4_1:71383042-71383061 | None:intergenic | 25.0% |
| ! | TGTGGAAAGAAAAAAATGAT+GGG | - | chr4_1:71383058-71383077 | None:intergenic | 25.0% |
| ! | TTGTGGAAAGAAAAAAATGA+TGG | - | chr4_1:71383059-71383078 | None:intergenic | 25.0% |
| !!! | TCATTTTGATAATGGAATCT+AGG | - | chr4_1:71383150-71383169 | None:intergenic | 25.0% |
| !!! | AACTGCTATCATTTTGATAA+TGG | - | chr4_1:71383158-71383177 | None:intergenic | 25.0% |
| ! | CTCTTGAATCATTGAATATA+AGG | - | chr4_1:71383670-71383689 | None:intergenic | 25.0% |
| ! | TTTGTATTTCTCCATATATG+GGG | - | chr4_1:71383826-71383845 | None:intergenic | 25.0% |
| !! | TATGGTTGATGTATGTATAT+GGG | - | chr4_1:71383894-71383913 | None:intergenic | 25.0% |
| !! | GTTGATTCAAAATGAATTCT+CGG | - | chr4_1:71383958-71383977 | None:intergenic | 25.0% |
| !! | ATTCTAATTTAAAGCTGAGA+TGG | - | chr4_1:71384107-71384126 | None:intergenic | 25.0% |
| !! | TTATTTATGTGTTGGTCAAT+AGG | - | chr4_1:71384293-71384312 | None:intergenic | 25.0% |
| ! | TTTCCTGTTTATTTATGTGT+TGG | - | chr4_1:71384301-71384320 | None:intergenic | 25.0% |
| ! | ACATAAATAAACAGGAAAGA+TGG | + | chr4_1:71384303-71384322 | Msa0569490:intron | 25.0% |
| ! | ACTAACAAATGAAAAACTAG+TGG | - | chr4_1:71384441-71384460 | None:intergenic | 25.0% |
| !!! | AATGATTTGTTACCAAGTAA+TGG | - | chr4_1:71384741-71384760 | None:intergenic | 25.0% |
| ! | ACAAACAAATAGTTTCCAAA+AGG | - | chr4_1:71385053-71385072 | None:intergenic | 25.0% |
| ! | TATTTGTTTGTTTCAGAAGA+AGG | + | chr4_1:71385062-71385081 | Msa0569490:CDS | 25.0% |
| ! | ATCATCTTAATAATTGTGTG+TGG | - | chr4_1:71385107-71385126 | None:intergenic | 25.0% |
| ! | TGATAAACAAGATGATCAAA+TGG | + | chr4_1:71385950-71385969 | Msa0569490:CDS | 25.0% |
| ! | GATAAACAAGATGATCAAAT+GGG | + | chr4_1:71385951-71385970 | Msa0569490:CDS | 25.0% |
| !! | TTCACAATTCTATAAGCTTT+TGG | + | chr4_1:71386133-71386152 | Msa0569490:CDS | 25.0% |
| ! | AAAATGAGTTATTTAGCTGA+AGG | - | chr4_1:71386686-71386705 | None:intergenic | 25.0% |
| ! | AAGGAAACTTGCATTTATAA+AGG | - | chr4_1:71386730-71386749 | None:intergenic | 25.0% |
| ! | AATTAATGAAAACACCCTTA+AGG | - | chr4_1:71386765-71386784 | None:intergenic | 25.0% |
| AATGAATGAGTGAGTACTTA+CGG | - | chr4_1:71379539-71379558 | None:intergenic | 30.0% | |
| AAAATTAGTTAGTGAGTGGA+AGG | - | chr4_1:71379563-71379582 | None:intergenic | 30.0% | |
| ! | TTGTCTTTTTGACAAAGCTA+AGG | + | chr4_1:71379640-71379659 | Msa0569490:intron | 30.0% |
| !!! | ATGTTGTTTTTTCTTGTGTC+AGG | + | chr4_1:71379705-71379724 | Msa0569490:intron | 30.0% |
| !!! | GTTTTGGATTGAGTTGAAAA+GGG | - | chr4_1:71380038-71380057 | None:intergenic | 30.0% |
| ! | GAAAAAAACAAACCTGGTTT+TGG | - | chr4_1:71380054-71380073 | None:intergenic | 30.0% |
| TAATTTGAGTGTGTGAATTC+AGG | - | chr4_1:71380390-71380409 | None:intergenic | 30.0% | |
| ACTCAAATTATTGGAAACAG+TGG | + | chr4_1:71380400-71380419 | Msa0569490:intron | 30.0% | |
| AATGTTTAAGTACGAGATAG+AGG | + | chr4_1:71380620-71380639 | Msa0569490:intron | 30.0% | |
| ! | TGTTAATTGTCCTCTTTTCT+TGG | + | chr4_1:71380889-71380908 | Msa0569490:intron | 30.0% |
| AACTAATGCTCCTATCTTAA+CGG | - | chr4_1:71381087-71381106 | None:intergenic | 30.0% | |
| ATGTCATTGTACAAAGATTG+GGG | - | chr4_1:71381390-71381409 | None:intergenic | 30.0% | |
| GATGTCATTGTACAAAGATT+GGG | - | chr4_1:71381391-71381410 | None:intergenic | 30.0% | |
| TGATGTCATTGTACAAAGAT+TGG | - | chr4_1:71381392-71381411 | None:intergenic | 30.0% | |
| TCTTAAGTGTTACACTTTGT+GGG | - | chr4_1:71381505-71381524 | None:intergenic | 30.0% | |
| ATCTTAAGTGTTACACTTTG+TGG | - | chr4_1:71381506-71381525 | None:intergenic | 30.0% | |
| !! | TACAAGTACTGTTTTATCGT+TGG | - | chr4_1:71381562-71381581 | None:intergenic | 30.0% |
| TATTTATATGGGAGCTTCTA+CGG | - | chr4_1:71381714-71381733 | None:intergenic | 30.0% | |
| ! | TAAAAAAAGTGTGAGTGTGA+CGG | - | chr4_1:71381769-71381788 | None:intergenic | 30.0% |
| !!! | CACACTTTTTTTATCAGTGT+TGG | + | chr4_1:71381776-71381795 | Msa0569490:intron | 30.0% |
| ATTATGTTAAACCTCACCAA+TGG | - | chr4_1:71382080-71382099 | None:intergenic | 30.0% | |
| TTCATGACATGTTAATGAAC+CGG | - | chr4_1:71382151-71382170 | None:intergenic | 30.0% | |
| TTTCTTATCTTGTGCTCTTA+AGG | + | chr4_1:71382366-71382385 | Msa0569490:intron | 30.0% | |
| TTGCAAAATCCTCTAAATGT+CGG | + | chr4_1:71382486-71382505 | Msa0569490:intron | 30.0% | |
| ! | TGTATTGTGTTTTGTCATGA+TGG | - | chr4_1:71382518-71382537 | None:intergenic | 30.0% |
| TAAACATAGAGGACAACTTA+AGG | - | chr4_1:71382581-71382600 | None:intergenic | 30.0% | |
| CTCTTACAACCATCTTTAAA+AGG | - | chr4_1:71382691-71382710 | None:intergenic | 30.0% | |
| TTTGAACACACGTACATAAA+TGG | - | chr4_1:71382827-71382846 | None:intergenic | 30.0% | |
| ATATATTAGCAGTGTGAACA+TGG | + | chr4_1:71383013-71383032 | Msa0569490:intron | 30.0% | |
| ! | ATTGATTGTTAGCACTTTTG+TGG | - | chr4_1:71383076-71383095 | None:intergenic | 30.0% |
| ! | CATGTTTTATGCACTAATCA+AGG | - | chr4_1:71383105-71383124 | None:intergenic | 30.0% |
| ATCTAATATCTACTTGATGG+AGG | - | chr4_1:71383182-71383201 | None:intergenic | 30.0% | |
| ATTAGATAATGCCACAAACA+AGG | + | chr4_1:71383247-71383266 | Msa0569490:intron | 30.0% | |
| TGAGAAGTAAACATAAGACT+TGG | + | chr4_1:71383773-71383792 | Msa0569490:intron | 30.0% | |
| TAAACATAAGACTTGGACAT+GGG | + | chr4_1:71383780-71383799 | Msa0569490:intron | 30.0% | |
| ! | ATGGTTGATGTATGTATATG+GGG | - | chr4_1:71383893-71383912 | None:intergenic | 30.0% |
| ! | GTATGGTTGATGTATGTATA+TGG | - | chr4_1:71383895-71383914 | None:intergenic | 30.0% |
| AAACTAGTATTCCTCACAAA+GGG | + | chr4_1:71383915-71383934 | Msa0569490:intron | 30.0% | |
| ! | ATATCACAATTTGAGACCTA+AGG | + | chr4_1:71384079-71384098 | Msa0569490:intron | 30.0% |
| TGACCAACACATAAATAAAC+AGG | + | chr4_1:71384295-71384314 | Msa0569490:intron | 30.0% | |
| ! | GACCGTAATGACATTTTATA+TGG | - | chr4_1:71384362-71384381 | None:intergenic | 30.0% |
| !! | TTTTTCTCTGGAAATGACTT+GGG | - | chr4_1:71384766-71384785 | None:intergenic | 30.0% |
| !! | ATTTTTCTCTGGAAATGACT+TGG | - | chr4_1:71384767-71384786 | None:intergenic | 30.0% |
| AAGTCATTTCCAGAGAAAAA+TGG | + | chr4_1:71384766-71384785 | Msa0569490:CDS | 30.0% | |
| AGTCATTTCCAGAGAAAAAT+GGG | + | chr4_1:71384767-71384786 | Msa0569490:CDS | 30.0% | |
| ! | TAAATTTCCTGCTTCAGTTT+TGG | + | chr4_1:71384874-71384893 | Msa0569490:CDS | 30.0% |
| CCAAAAGGATGAAACAAAAT+TGG | - | chr4_1:71385038-71385057 | None:intergenic | 30.0% | |
| !! | CCAATTTTGTTTCATCCTTT+TGG | + | chr4_1:71385035-71385054 | Msa0569490:CDS | 30.0% |
| TTCTCCAACTAATAGTATTG+AGG | + | chr4_1:71385148-71385167 | Msa0569490:CDS | 30.0% | |
| TGTTCCTCAATACTATTAGT+TGG | - | chr4_1:71385155-71385174 | None:intergenic | 30.0% | |
| ! | ATTGAGGAACATTTGAAGTA+TGG | + | chr4_1:71385164-71385183 | Msa0569490:CDS | 30.0% |
| GTTAGTTAATAAGCTGTCTT+TGG | + | chr4_1:71385190-71385209 | Msa0569490:CDS | 30.0% | |
| AATAAGAAGAACACTATGCT+TGG | + | chr4_1:71385221-71385240 | Msa0569490:CDS | 30.0% | |
| ATAAGAAGAACACTATGCTT+GGG | + | chr4_1:71385222-71385241 | Msa0569490:CDS | 30.0% | |
| AAGCTATCTTGAGAAGAATA+TGG | - | chr4_1:71385573-71385592 | None:intergenic | 30.0% | |
| ACTAAGCGTTTATAGCATAA+GGG | - | chr4_1:71385692-71385711 | None:intergenic | 30.0% | |
| AACTAAGCGTTTATAGCATA+AGG | - | chr4_1:71385693-71385712 | None:intergenic | 30.0% | |
| CCTTCTTATAATTGAAGCTA+AGG | - | chr4_1:71385742-71385761 | None:intergenic | 30.0% | |
| CCTTAGCTTCAATTATAAGA+AGG | + | chr4_1:71385739-71385758 | Msa0569490:intron | 30.0% | |
| TATGACACATTCAAAACAAG+AGG | + | chr4_1:71385978-71385997 | Msa0569490:CDS | 30.0% | |
| TAATAGTCAGCTATATCAAG+TGG | - | chr4_1:71386164-71386183 | None:intergenic | 30.0% | |
| ATAGCTGACTATTATAAGCA+AGG | + | chr4_1:71386170-71386189 | Msa0569490:CDS | 30.0% | |
| TAGCTGACTATTATAAGCAA+GGG | + | chr4_1:71386171-71386190 | Msa0569490:CDS | 30.0% | |
| TTAGAAAAGGGTCATTACAT+AGG | + | chr4_1:71386200-71386219 | Msa0569490:CDS | 30.0% | |
| !! | GAAGGTATGAGATTTTTGAT+AGG | + | chr4_1:71386237-71386256 | Msa0569490:CDS | 30.0% |
| AAGCATAGAGAAGTTACTAT+TGG | + | chr4_1:71386266-71386285 | Msa0569490:CDS | 30.0% | |
| AACACAAGATTCATGTTTCT+GGG | + | chr4_1:71386325-71386344 | Msa0569490:CDS | 30.0% | |
| ! | TAACAAGTTGGATACATTGT+GGG | + | chr4_1:71386403-71386422 | Msa0569490:CDS | 30.0% |
| !!! | CTTATTTTGAATCAACTCGA+TGG | - | chr4_1:71386456-71386475 | None:intergenic | 30.0% |
| !! | CATCGAGTTGATTCAAAATA+AGG | + | chr4_1:71386454-71386473 | Msa0569490:CDS | 30.0% |
| ! | GAATTCAAGTTACAGTACAT+GGG | + | chr4_1:71386502-71386521 | Msa0569490:CDS | 30.0% |
| TTGTTCCTTAGTACTTACTT+TGG | + | chr4_1:71386609-71386628 | Msa0569490:exon | 30.0% | |
| TGAATCCAAAGTAAGTACTA+AGG | - | chr4_1:71386617-71386636 | None:intergenic | 30.0% | |
| AGAAAAGAGATTCAACATCC+CGG | - | chr4_1:71380014-71380033 | None:intergenic | 35.0% | |
| !!! | GGTTTTGGATTGAGTTGAAA+AGG | - | chr4_1:71380039-71380058 | None:intergenic | 35.0% |
| TTTCAACTCAATCCAAAACC+AGG | + | chr4_1:71380039-71380058 | Msa0569490:CDS | 35.0% | |
| ATCAAGTGAATTAGCTCAAC+TGG | + | chr4_1:71380674-71380693 | Msa0569490:intron | 35.0% | |
| !! | TGTCCACTTTTACCTGAAAT+AGG | + | chr4_1:71380806-71380825 | Msa0569490:intron | 35.0% |
| ! | TCTCCTATTTCAGGTAAAAG+TGG | - | chr4_1:71380812-71380831 | None:intergenic | 35.0% |
| TGTGTTAACTCTCCTATTTC+AGG | - | chr4_1:71380821-71380840 | None:intergenic | 35.0% | |
| CACTAACATCATCGTCATTA+TGG | + | chr4_1:71380850-71380869 | Msa0569490:intron | 35.0% | |
| ATTCTCTCATATGCTTGAGA+CGG | + | chr4_1:71380928-71380947 | Msa0569490:intron | 35.0% | |
| ! | TTAACTAGTGCCGTTAAGAT+AGG | + | chr4_1:71381074-71381093 | Msa0569490:intron | 35.0% |
| ! | AGTCATGAGAATGACTTTTC+TGG | + | chr4_1:71381324-71381343 | Msa0569490:intron | 35.0% |
| TGTTACGCTTAAAACAAGGT+AGG | - | chr4_1:71381481-71381500 | None:intergenic | 35.0% | |
| CTTAAGTGTTACACTTTGTG+GGG | - | chr4_1:71381504-71381523 | None:intergenic | 35.0% | |
| GGAGATGGGGTTATTTATAT+GGG | - | chr4_1:71381725-71381744 | None:intergenic | 35.0% | |
| AGGAGATGGGGTTATTTATA+TGG | - | chr4_1:71381726-71381745 | None:intergenic | 35.0% | |
| TGCACGAACCTATCAAATTA+TGG | + | chr4_1:71381799-71381818 | Msa0569490:intron | 35.0% | |
| CCTGATCTCCATAATTTGAT+AGG | - | chr4_1:71381810-71381829 | None:intergenic | 35.0% | |
| CCTATCAAATTATGGAGATC+AGG | + | chr4_1:71381807-71381826 | Msa0569490:intron | 35.0% | |
| AGTAAGTAGAGATTGTCCAT+TGG | + | chr4_1:71382061-71382080 | Msa0569490:intron | 35.0% | |
| ! | GTTTTATGCACTAATCAAGG+TGG | - | chr4_1:71383102-71383121 | None:intergenic | 35.0% |
| ATAATGCCACAAACAAGGAT+GGG | + | chr4_1:71383252-71383271 | Msa0569490:intron | 35.0% | |
| ! | TGTCATTTCAAATCCCTATC+AGG | - | chr4_1:71383450-71383469 | None:intergenic | 35.0% |
| GTAAACATAAGACTTGGACA+TGG | + | chr4_1:71383779-71383798 | Msa0569490:intron | 35.0% | |
| TGCACAATTTACCCCATATA+TGG | + | chr4_1:71383812-71383831 | Msa0569490:intron | 35.0% | |
| ! | TGGTTGATGTATGTATATGG+GGG | - | chr4_1:71383892-71383911 | None:intergenic | 35.0% |
| ! | GTGAGGAATACTAGTTTGTA+TGG | - | chr4_1:71383912-71383931 | None:intergenic | 35.0% |
| CAAACTAGTATTCCTCACAA+AGG | + | chr4_1:71383914-71383933 | Msa0569490:intron | 35.0% | |
| ! | TATGTTACCATTTCAGGTGT+TGG | + | chr4_1:71384566-71384585 | Msa0569490:intron | 35.0% |
| ! | ATGTTACCATTTCAGGTGTT+GGG | + | chr4_1:71384567-71384586 | Msa0569490:intron | 35.0% |
| AATATACCCAACACCTGAAA+TGG | - | chr4_1:71384576-71384595 | None:intergenic | 35.0% | |
| ACAAAATCTCTTGTGATCAC+TGG | + | chr4_1:71384609-71384628 | Msa0569490:CDS | 35.0% | |
| !!! | ACTTTTGGTTCACCATTACT+TGG | + | chr4_1:71384726-71384745 | Msa0569490:CDS | 35.0% |
| GTCATTTCCAGAGAAAAATG+GGG | + | chr4_1:71384768-71384787 | Msa0569490:CDS | 35.0% | |
| ATAGGTGCAAATAGCAATCT+TGG | - | chr4_1:71384834-71384853 | None:intergenic | 35.0% | |
| TCCATGAATTCACCAGAATA+TGG | + | chr4_1:71384903-71384922 | Msa0569490:CDS | 35.0% | |
| TCCATATTCTGGTGAATTCA+TGG | - | chr4_1:71384907-71384926 | None:intergenic | 35.0% | |
| TTGGAAACTGCAACACAAAA+TGG | + | chr4_1:71384990-71385009 | Msa0569490:CDS | 35.0% | |
| TGCTAAACCAGAAGATTGAA+TGG | - | chr4_1:71385288-71385307 | None:intergenic | 35.0% | |
| !! | ATCTTCTGGTTTAGCAAATC+AGG | + | chr4_1:71385292-71385311 | Msa0569490:CDS | 35.0% |
| GCTCTCACTAATATAATCCA+AGG | + | chr4_1:71385424-71385443 | Msa0569490:intron | 35.0% | |
| TATCAAATGTGCCTCAATTG+TGG | + | chr4_1:71385512-71385531 | Msa0569490:intron | 35.0% | |
| TACTGTATGATGTAACCAAC+AGG | + | chr4_1:71385782-71385801 | Msa0569490:intron | 35.0% | |
| !! | TGCTGACTTCAAACATTCTT+TGG | - | chr4_1:71385826-71385845 | None:intergenic | 35.0% |
| ! | AAGAATGTTTGAAGTCAGCA+AGG | + | chr4_1:71385826-71385845 | Msa0569490:CDS | 35.0% |
| !! | AATTCTATTTGGGCTCTGAA+AGG | - | chr4_1:71385915-71385934 | None:intergenic | 35.0% |
| AGAATCTAGCGAGTTTGTAA+CGG | - | chr4_1:71386037-71386056 | None:intergenic | 35.0% | |
| TTACAAACTCGCTAGATTCT+GGG | + | chr4_1:71386037-71386056 | Msa0569490:CDS | 35.0% | |
| !! | CAAGGGAAGCATTTAGAAAA+GGG | + | chr4_1:71386188-71386207 | Msa0569490:CDS | 35.0% |
| ! | GGTATGAGATTTTTGATAGG+TGG | + | chr4_1:71386240-71386259 | Msa0569490:CDS | 35.0% |
| ! | ATGAGATTTTTGATAGGTGG+TGG | + | chr4_1:71386243-71386262 | Msa0569490:CDS | 35.0% |
| CAACACAAGATTCATGTTTC+TGG | + | chr4_1:71386324-71386343 | Msa0569490:CDS | 35.0% | |
| TGAAAGAGACACTAACAAGT+TGG | + | chr4_1:71386391-71386410 | Msa0569490:CDS | 35.0% | |
| ! | CTAACAAGTTGGATACATTG+TGG | + | chr4_1:71386402-71386421 | Msa0569490:CDS | 35.0% |
| ! | AACAAGTTGGATACATTGTG+GGG | + | chr4_1:71386404-71386423 | Msa0569490:CDS | 35.0% |
| !! | CGAGTTGATTCAAAATAAGG+AGG | + | chr4_1:71386457-71386476 | Msa0569490:CDS | 35.0% |
| ! | GGAATTCAAGTTACAGTACA+TGG | + | chr4_1:71386501-71386520 | Msa0569490:CDS | 35.0% |
| CAAGTTTCCTTTGTGTGTTA+AGG | + | chr4_1:71386739-71386758 | Msa0569490:three_prime_UTR | 35.0% | |
| TTTGTGTGTTAAGGCCTTAA+GGG | + | chr4_1:71386748-71386767 | Msa0569490:three_prime_UTR | 35.0% | |
| AAATTGGGGTCTTTGTCTTG+TGG | - | chr4_1:71379480-71379499 | None:intergenic | 40.0% | |
| CAATTTCCACGAAAACTCTG+AGG | + | chr4_1:71379614-71379633 | Msa0569490:intron | 40.0% | |
| CATTCGTTATGTGAACATGC+TGG | + | chr4_1:71380344-71380363 | Msa0569490:intron | 40.0% | |
| AGGACAAAGCACGTAAAAAC+AGG | - | chr4_1:71380370-71380389 | None:intergenic | 40.0% | |
| GGAAACAGTGGAATCAAGAT+TGG | + | chr4_1:71380412-71380431 | Msa0569490:intron | 40.0% | |
| CTTAACGGCACTAGTTAACA+TGG | - | chr4_1:71381072-71381091 | None:intergenic | 40.0% | |
| TAGTAATGCGTGCAACATCT+TGG | - | chr4_1:71381588-71381607 | None:intergenic | 40.0% | |
| ATGGAGATCAGGTGAAGAAA+AGG | + | chr4_1:71381818-71381837 | Msa0569490:intron | 40.0% | |
| CATGTTAATGAACCGGATCA+GGG | - | chr4_1:71382144-71382163 | None:intergenic | 40.0% | |
| ACATGTTAATGAACCGGATC+AGG | - | chr4_1:71382145-71382164 | None:intergenic | 40.0% | |
| AAACTTAAGGTGGTCCAGAT+GGG | - | chr4_1:71382452-71382471 | None:intergenic | 40.0% | |
| TAAACTTAAGGTGGTCCAGA+TGG | - | chr4_1:71382453-71382472 | None:intergenic | 40.0% | |
| !!! | GTGGATTTTGGTTGAGCTAA+TGG | - | chr4_1:71382553-71382572 | None:intergenic | 40.0% |
| !!! | CTTAAGGCATTGGTGGATTT+TGG | - | chr4_1:71382565-71382584 | None:intergenic | 40.0% |
| TAGAGGACAACTTAAGGCAT+TGG | - | chr4_1:71382575-71382594 | None:intergenic | 40.0% | |
| TAGTGCATAAAACATGCCGT+TGG | + | chr4_1:71383109-71383128 | Msa0569490:intron | 40.0% | |
| AGTGCATAAAACATGCCGTT+GGG | + | chr4_1:71383110-71383129 | Msa0569490:intron | 40.0% | |
| GATAATGCCACAAACAAGGA+TGG | + | chr4_1:71383251-71383270 | Msa0569490:intron | 40.0% | |
| CTAGTAACATCACTGAGTGA+TGG | + | chr4_1:71383330-71383349 | Msa0569490:intron | 40.0% | |
| TTTCAAATCCCTATCAGGTC+AGG | - | chr4_1:71383445-71383464 | None:intergenic | 40.0% | |
| TTAACGTGATGTGAGTCATG+TGG | - | chr4_1:71383581-71383600 | None:intergenic | 40.0% | |
| CAGCTGGTTAAGACAAAGTT+GGG | + | chr4_1:71383627-71383646 | Msa0569490:intron | 40.0% | |
| AGCTGGTTAAGACAAAGTTG+GGG | + | chr4_1:71383628-71383647 | Msa0569490:intron | 40.0% | |
| GTTAAGACAAAGTTGGGGAT+AGG | + | chr4_1:71383633-71383652 | Msa0569490:intron | 40.0% | |
| AAGGTTGTTGAAGCGGTAAA+GGG | - | chr4_1:71383865-71383884 | None:intergenic | 40.0% | |
| AAAGGTTGTTGAAGCGGTAA+AGG | - | chr4_1:71383866-71383885 | None:intergenic | 40.0% | |
| GTATGTATATGGGGGAGAAA+AGG | - | chr4_1:71383884-71383903 | None:intergenic | 40.0% | |
| !! | TATTCCTCACAAAGGGTGTT+TGG | + | chr4_1:71383922-71383941 | Msa0569490:intron | 40.0% |
| TAAAGCTGAGATGGTACCTT+AGG | - | chr4_1:71384098-71384117 | None:intergenic | 40.0% | |
| ! | AGGATGAAGAGATGGATTTG+AGG | - | chr4_1:71384689-71384708 | None:intergenic | 40.0% |
| TACTGGTAAGGATGAAGAGA+TGG | - | chr4_1:71384697-71384716 | None:intergenic | 40.0% | |
| AGTGATGCACATTACTGGTA+AGG | - | chr4_1:71384709-71384728 | None:intergenic | 40.0% | |
| CCAAAAGTGATGCACATTAC+TGG | - | chr4_1:71384714-71384733 | None:intergenic | 40.0% | |
| ! | CCAGTAATGTGCATCACTTT+TGG | + | chr4_1:71384711-71384730 | Msa0569490:CDS | 40.0% |
| ATTTCCAGAGAAAAATGGGG+TGG | + | chr4_1:71384771-71384790 | Msa0569490:CDS | 40.0% | |
| !! | ATTTCCACCCCATTTTTCTC+TGG | - | chr4_1:71384778-71384797 | None:intergenic | 40.0% |
| ! | AAATTTAGCTGGGAAGTGTG+GGG | - | chr4_1:71384861-71384880 | None:intergenic | 40.0% |
| ! | GAAATTTAGCTGGGAAGTGT+GGG | - | chr4_1:71384862-71384881 | None:intergenic | 40.0% |
| CTGAAGCAGGAAATTTAGCT+GGG | - | chr4_1:71384871-71384890 | None:intergenic | 40.0% | |
| ACTGAAGCAGGAAATTTAGC+TGG | - | chr4_1:71384872-71384891 | None:intergenic | 40.0% | |
| CAATACAGCAGTGAACAACT+CGG | - | chr4_1:71384964-71384983 | None:intergenic | 40.0% | |
| CACTGCTGTATTGGATTCTT+TGG | + | chr4_1:71384971-71384990 | Msa0569490:CDS | 40.0% | |
| !! | AGAAGAAGGTGCTTTATGTG+TGG | + | chr4_1:71385076-71385095 | Msa0569490:CDS | 40.0% |
| CATTCCTAACTCAAGCTATG+AGG | + | chr4_1:71385247-71385266 | Msa0569490:CDS | 40.0% | |
| GAATTGGCCATTCAATCTTC+TGG | + | chr4_1:71385278-71385297 | Msa0569490:CDS | 40.0% | |
| TTACAACACGACCACAATTG+AGG | - | chr4_1:71385526-71385545 | None:intergenic | 40.0% | |
| GACTTCAAACATTCTTTGGC+TGG | - | chr4_1:71385822-71385841 | None:intergenic | 40.0% | |
| TTGAAGTCAGCAAGGAGAAT+TGG | + | chr4_1:71385834-71385853 | Msa0569490:CDS | 40.0% | |
| ACAACCTTGGCTAAGGATAA+TGG | - | chr4_1:71385891-71385910 | None:intergenic | 40.0% | |
| ! | GTTGACTTCCATGTGTACTT+TGG | - | chr4_1:71386009-71386028 | None:intergenic | 40.0% |
| GTTACAAACTCGCTAGATTC+TGG | + | chr4_1:71386036-71386055 | Msa0569490:CDS | 40.0% | |
| ACTTTGACCAAAGAGCCAAA+TGG | + | chr4_1:71386102-71386121 | Msa0569490:CDS | 40.0% | |
| CTTTGACCAAAGAGCCAAAT+GGG | + | chr4_1:71386103-71386122 | Msa0569490:CDS | 40.0% | |
| !! | GCAAGGGAAGCATTTAGAAA+AGG | + | chr4_1:71386187-71386206 | Msa0569490:CDS | 40.0% |
| AAGGGTCATTACATAGGACA+TGG | + | chr4_1:71386206-71386225 | Msa0569490:CDS | 40.0% | |
| GGCTAAAGTTGAAGAAGCAA+GGG | + | chr4_1:71386346-71386365 | Msa0569490:CDS | 40.0% | |
| AAGTTGAAGAAGCAAGGGAT+TGG | + | chr4_1:71386351-71386370 | Msa0569490:CDS | 40.0% | |
| ! | ACAAGTTGGATACATTGTGG+GGG | + | chr4_1:71386405-71386424 | Msa0569490:CDS | 40.0% |
| ! | TGTCTATTGATGTTCTGGCT+AGG | + | chr4_1:71386480-71386499 | Msa0569490:CDS | 40.0% |
| ! | TTCAAGTTACAGTACATGGG+TGG | + | chr4_1:71386505-71386524 | Msa0569490:CDS | 40.0% |
| AATTGAGAGCAAATGTGCAG+AGG | + | chr4_1:71386549-71386568 | Msa0569490:CDS | 40.0% | |
| CTTAAGGCCTTAACACACAA+AGG | - | chr4_1:71386749-71386768 | None:intergenic | 40.0% | |
| CTTTGTGTGTTAAGGCCTTA+AGG | + | chr4_1:71386747-71386766 | Msa0569490:three_prime_UTR | 40.0% | |
| GTGGAGAAGAAGAACGAGTA+AGG | - | chr4_1:71379461-71379480 | None:intergenic | 45.0% | |
| TGAAGTTTCGTTTGCAGCCA+TGG | - | chr4_1:71379516-71379535 | None:intergenic | 45.0% | |
| ! | CAACAACCTCAGAGTTTTCG+TGG | - | chr4_1:71379623-71379642 | None:intergenic | 45.0% |
| !! | AGTTTTGTGGTGGAGCATGT+TGG | + | chr4_1:71379833-71379852 | Msa0569490:CDS | 45.0% |
| GTCGTGTATGTAGCTTTCTC+CGG | + | chr4_1:71379860-71379879 | Msa0569490:CDS | 45.0% | |
| ! | GGGGTGTTACGCTTAAAACA+AGG | - | chr4_1:71381485-71381504 | None:intergenic | 45.0% |
| AATGGATCATGGAGGAGATG+GGG | - | chr4_1:71381738-71381757 | None:intergenic | 45.0% | |
| GAATGGATCATGGAGGAGAT+GGG | - | chr4_1:71381739-71381758 | None:intergenic | 45.0% | |
| TGAAAGGGAATGGATCATGG+AGG | - | chr4_1:71381746-71381765 | None:intergenic | 45.0% | |
| GTAGAGATTGTCCATTGGTG+AGG | + | chr4_1:71382066-71382085 | Msa0569490:intron | 45.0% | |
| GGTACAATAGAATCCCCATC+TGG | + | chr4_1:71382435-71382454 | Msa0569490:intron | 45.0% | |
| AACTTAAGGTGGTCCAGATG+GGG | - | chr4_1:71382451-71382470 | None:intergenic | 45.0% | |
| TGGAGTTTGCCGACATTTAG+AGG | - | chr4_1:71382498-71382517 | None:intergenic | 45.0% | |
| !! | AGGACAACTTAAGGCATTGG+TGG | - | chr4_1:71382572-71382591 | None:intergenic | 45.0% |
| !! | AGTCAACTAGTGCTGGTCAA+TGG | - | chr4_1:71383356-71383375 | None:intergenic | 45.0% |
| GTCATTGAGTGCGTGTGAAA+GGG | + | chr4_1:71383389-71383408 | Msa0569490:intron | 45.0% | |
| AAATCCCTATCAGGTCAGGT+GGG | - | chr4_1:71383441-71383460 | None:intergenic | 45.0% | |
| GCTGGTGTGAACATTGAACA+AGG | - | chr4_1:71383611-71383630 | None:intergenic | 45.0% | |
| TGTTCAATGTTCACACCAGC+TGG | + | chr4_1:71383611-71383630 | Msa0569490:intron | 45.0% | |
| CCAACTTTGTCTTAACCAGC+TGG | - | chr4_1:71383629-71383648 | None:intergenic | 45.0% | |
| CCAGCTGGTTAAGACAAAGT+TGG | + | chr4_1:71383626-71383645 | Msa0569490:intron | 45.0% | |
| AGGTTGTTGAAGCGGTAAAG+GGG | - | chr4_1:71383864-71383883 | None:intergenic | 45.0% | |
| GGGAGAAAAGGTTGTTGAAG+CGG | - | chr4_1:71383872-71383891 | None:intergenic | 45.0% | |
| AAAGCCAAACACCCTTTGTG+AGG | - | chr4_1:71383929-71383948 | None:intergenic | 45.0% | |
| !! | CACAAAGGGTGTTTGGCTTT+AGG | + | chr4_1:71383929-71383948 | Msa0569490:intron | 45.0% |
| GTCATTACGGTCAAACCACT+AGG | + | chr4_1:71384370-71384389 | Msa0569490:intron | 45.0% | |
| ACCACTAGGTTGTAACAACG+AGG | + | chr4_1:71384384-71384403 | Msa0569490:intron | 45.0% | |
| TCCTCGTTGTTACAACCTAG+TGG | - | chr4_1:71384388-71384407 | None:intergenic | 45.0% | |
| CTATAGCTCCTCCAATGGAA+TGG | - | chr4_1:71384635-71384654 | None:intergenic | 45.0% | |
| AGATGCTATAGCTCCTCCAA+TGG | - | chr4_1:71384640-71384659 | None:intergenic | 45.0% | |
| TAGCATCTCTCTGCACTCTT+TGG | + | chr4_1:71384652-71384671 | Msa0569490:CDS | 45.0% | |
| GGAAATTTAGCTGGGAAGTG+TGG | - | chr4_1:71384863-71384882 | None:intergenic | 45.0% | |
| !! | AGAAGCACCAAAACTGAAGC+AGG | - | chr4_1:71384884-71384903 | None:intergenic | 45.0% |
| GCTGCAAGCTTTCCATATTC+TGG | - | chr4_1:71384918-71384937 | None:intergenic | 45.0% | |
| CGAGTTGTTCACTGCTGTAT+TGG | + | chr4_1:71384962-71384981 | Msa0569490:CDS | 45.0% | |
| CTAACTCAAGCTATGAGGCA+GGG | + | chr4_1:71385252-71385271 | Msa0569490:CDS | 45.0% | |
| !!! | AGGTTTGCAGCTTTTAGAGC+TGG | - | chr4_1:71385867-71385886 | None:intergenic | 45.0% |
| ! | CCTTGGCTAAGGATAATGGT+AGG | - | chr4_1:71385887-71385906 | None:intergenic | 45.0% |
| CCTACCATTATCCTTAGCCA+AGG | + | chr4_1:71385884-71385903 | Msa0569490:CDS | 45.0% | |
| ! | GAAAGGTACAACCTTGGCTA+AGG | - | chr4_1:71385898-71385917 | None:intergenic | 45.0% |
| AGGATCTGCCAAAGTACACA+TGG | + | chr4_1:71385998-71386017 | Msa0569490:CDS | 45.0% | |
| GCTCTTTGGTCAAAGTCATG+TGG | - | chr4_1:71386098-71386117 | None:intergenic | 45.0% | |
| GGGCTAAAGTTGAAGAAGCA+AGG | + | chr4_1:71386345-71386364 | Msa0569490:CDS | 45.0% | |
| !! | GAAGCAAGGGATTGGTTGAA+TGG | + | chr4_1:71386359-71386378 | Msa0569490:CDS | 45.0% |
| !! | GGAGGTGTCTATTGATGTTC+TGG | + | chr4_1:71386475-71386494 | Msa0569490:CDS | 45.0% |
| CAGAGGTTTCCTCAACAGTT+TGG | + | chr4_1:71386566-71386585 | Msa0569490:CDS | 45.0% | |
| AGGAATCGTCCAAACTGTTG+AGG | - | chr4_1:71386578-71386597 | None:intergenic | 45.0% | |
| CAGTTTGGACGATTCCTTGA+CGG | + | chr4_1:71386581-71386600 | Msa0569490:CDS | 45.0% | |
| AGTTTGGACGATTCCTTGAC+GGG | + | chr4_1:71386582-71386601 | Msa0569490:CDS | 45.0% | |
| !!! | TTTTTTCATTTTATATTATT+TGG | + | chr4_1:71380067-71380086 | Msa0569490:intron | 5.0% |
| !!! | AAATATCTTTTATTTTTATT+AGG | + | chr4_1:71380754-71380773 | Msa0569490:intron | 5.0% |
| !! | GTTATTAATAATAATATTAT+AGG | - | chr4_1:71384531-71384550 | None:intergenic | 5.0% |
| GTTTGAGAGCAGTGAGATGC+TGG | + | chr4_1:71379727-71379746 | Msa0569490:CDS | 50.0% | |
| GATTTCTACGCCACTGTTGC+CGG | + | chr4_1:71379760-71379779 | Msa0569490:CDS | 50.0% | |
| CACAAAACTGCGGAGGTTGA+CGG | - | chr4_1:71379822-71379841 | None:intergenic | 50.0% | |
| CATGCTCCACCACAAAACTG+CGG | - | chr4_1:71379832-71379851 | None:intergenic | 50.0% | |
| AGCTTTCTCCGGCGTTCAAA+TGG | + | chr4_1:71379871-71379890 | Msa0569490:CDS | 50.0% | |
| !! | TTGGAGGCGTTGGAAAGCAT+CGG | + | chr4_1:71379926-71379945 | Msa0569490:CDS | 50.0% |
| ! | GTTTTCGACGCGTCGGAATA+AGG | + | chr4_1:71379961-71379980 | Msa0569490:CDS | 50.0% |
| GAATAAGGAAGAGGAGGAGC+CGG | + | chr4_1:71379976-71379995 | Msa0569490:CDS | 50.0% | |
| GGAATCGGAGAGTTGAACTC+TGG | + | chr4_1:71380775-71380794 | Msa0569490:intron | 50.0% | |
| AGACGGCGATGTTGTTAGTG+AGG | + | chr4_1:71380945-71380964 | Msa0569490:intron | 50.0% | |
| !! | GTTAGTGAGGCGTGCTACTT+TGG | + | chr4_1:71380958-71380977 | Msa0569490:intron | 50.0% |
| GGAATGGATCATGGAGGAGA+TGG | - | chr4_1:71381740-71381759 | None:intergenic | 50.0% | |
| CGGTGAAAGGGAATGGATCA+TGG | - | chr4_1:71381749-71381768 | None:intergenic | 50.0% | |
| AGTGTGACGGTGAAAGGGAA+TGG | - | chr4_1:71381756-71381775 | None:intergenic | 50.0% | |
| GTGTGAGTGTGACGGTGAAA+GGG | - | chr4_1:71381761-71381780 | None:intergenic | 50.0% | |
| AGTGTGAGTGTGACGGTGAA+AGG | - | chr4_1:71381762-71381781 | None:intergenic | 50.0% | |
| CCATCAATACGACCCTGATC+CGG | + | chr4_1:71382129-71382148 | Msa0569490:intron | 50.0% | |
| ATGCCGTTGGGCACATTGAA+AGG | + | chr4_1:71383122-71383141 | Msa0569490:intron | 50.0% | |
| TGCCGTTGGGCACATTGAAA+GGG | + | chr4_1:71383123-71383142 | Msa0569490:intron | 50.0% | |
| GACCCTTTCAATGTGCCCAA+CGG | - | chr4_1:71383128-71383147 | None:intergenic | 50.0% | |
| ! | TCCACTCCCATCCTTGTTTG+TGG | - | chr4_1:71383261-71383280 | None:intergenic | 50.0% |
| TGACCAGCACTAGTTGACTG+AGG | + | chr4_1:71383357-71383376 | Msa0569490:intron | 50.0% | |
| GACCAGCACTAGTTGACTGA+GGG | + | chr4_1:71383358-71383377 | Msa0569490:intron | 50.0% | |
| ACCAGCACTAGTTGACTGAG+GGG | + | chr4_1:71383359-71383378 | Msa0569490:intron | 50.0% | |
| CGTCATTGAGTGCGTGTGAA+AGG | + | chr4_1:71383388-71383407 | Msa0569490:intron | 50.0% | |
| TTTGTCCCACCTGACCTGAT+AGG | + | chr4_1:71383433-71383452 | Msa0569490:intron | 50.0% | |
| TTGTCCCACCTGACCTGATA+GGG | + | chr4_1:71383434-71383453 | Msa0569490:intron | 50.0% | |
| CAAATCCCTATCAGGTCAGG+TGG | - | chr4_1:71383442-71383461 | None:intergenic | 50.0% | |
| GGTTGTTGAAGCGGTAAAGG+GGG | - | chr4_1:71383863-71383882 | None:intergenic | 50.0% | |
| GTGATCACTGGCCATTCCAT+TGG | + | chr4_1:71384621-71384640 | Msa0569490:CDS | 50.0% | |
| ATCACTGGCCATTCCATTGG+AGG | + | chr4_1:71384624-71384643 | Msa0569490:CDS | 50.0% | |
| ! | TGGGAAGTGTGGGGTGTAAT+AGG | - | chr4_1:71384852-71384871 | None:intergenic | 50.0% |
| CCTGCCTCATAGCTTGAGTT+AGG | - | chr4_1:71385254-71385273 | None:intergenic | 50.0% | |
| CCTAACTCAAGCTATGAGGC+AGG | + | chr4_1:71385251-71385270 | Msa0569490:CDS | 50.0% | |
| CTATGAGGCAGGGCTTGAAT+TGG | + | chr4_1:71385262-71385281 | Msa0569490:CDS | 50.0% | |
| GTATCGCTGCAGATTCCTGT+TGG | - | chr4_1:71385800-71385819 | None:intergenic | 50.0% | |
| !! | GGCTCTGAAAGGTACAACCT+TGG | - | chr4_1:71385904-71385923 | None:intergenic | 50.0% |
| TTGTGAAGCGCAGACCCATT+TGG | - | chr4_1:71386120-71386139 | None:intergenic | 50.0% | |
| TAGGACATGGTAGAGCGAGA+AGG | + | chr4_1:71386219-71386238 | Msa0569490:CDS | 50.0% | |
| GTTTGGACGATTCCTTGACG+GGG | + | chr4_1:71386583-71386602 | Msa0569490:CDS | 50.0% | |
| AAGGAACAACTTCCCCGTCA+AGG | - | chr4_1:71386598-71386617 | None:intergenic | 50.0% | |
| CTGCACATCCTCCATGACTC+CGG | - | chr4_1:71379782-71379801 | None:intergenic | 55.0% | |
| GTCATGGAGGATGTGCAGCA+AGG | + | chr4_1:71379784-71379803 | Msa0569490:CDS | 55.0% | |
| ! | CGTCAACCTCCGCAGTTTTG+TGG | + | chr4_1:71379820-71379839 | Msa0569490:CDS | 55.0% |
| !! | CAACCTCCGCAGTTTTGTGG+TGG | + | chr4_1:71379823-71379842 | Msa0569490:CDS | 55.0% |
| TTCTCCGGCGTTCAAATGGC+CGG | + | chr4_1:71379875-71379894 | Msa0569490:CDS | 55.0% | |
| ! | GGATCCGAGTTGGAGAACGT+TGG | + | chr4_1:71379907-71379926 | Msa0569490:CDS | 55.0% |
| ! | TCCGAGTTGGAGAACGTTGG+AGG | + | chr4_1:71379910-71379929 | Msa0569490:CDS | 55.0% |
| GCCTCCAACGTTCTCCAACT+CGG | - | chr4_1:71379914-71379933 | None:intergenic | 55.0% | |
| ! | TTGGAGAACGTTGGAGGCGT+TGG | + | chr4_1:71379916-71379935 | Msa0569490:CDS | 55.0% |
| TTCCGACGCGTCGAAAACAG+CGG | - | chr4_1:71379959-71379978 | None:intergenic | 55.0% | |
| GACGCGTCGGAATAAGGAAG+AGG | + | chr4_1:71379967-71379986 | Msa0569490:CDS | 55.0% | |
| GCGTCGGAATAAGGAAGAGG+AGG | + | chr4_1:71379970-71379989 | Msa0569490:CDS | 55.0% | |
| ATCCCGGAGTGAACCTTCAC+CGG | - | chr4_1:71379998-71380017 | None:intergenic | 55.0% | |
| CCGGATCAGGGTCGTATTGA+TGG | - | chr4_1:71382132-71382151 | None:intergenic | 55.0% | |
| GCCACAAACAAGGATGGGAG+TGG | + | chr4_1:71383257-71383276 | Msa0569490:intron | 55.0% | |
| !! | CGCAGACCCATTTGGCTCTT+TGG | - | chr4_1:71386112-71386131 | None:intergenic | 55.0% |
| CTCCATGACTCCGGCAACAG+TGG | - | chr4_1:71379773-71379792 | None:intergenic | 60.0% | |
| CACTGTTGCCGGAGTCATGG+AGG | + | chr4_1:71379771-71379790 | Msa0569490:CDS | 60.0% | |
| GCTCCACCACAAAACTGCGG+AGG | - | chr4_1:71379829-71379848 | None:intergenic | 60.0% | |
| !! | GAGGCGTTGGAAAGCATCGG+TGG | + | chr4_1:71379929-71379948 | Msa0569490:CDS | 60.0% |
| !! | TGCCGCTGTTTTCGACGCGT+CGG | + | chr4_1:71379954-71379973 | Msa0569490:CDS | 60.0% |
| GAGCCGGTGAAGGTTCACTC+CGG | + | chr4_1:71379992-71380011 | Msa0569490:CDS | 60.0% | |
| AGCCGGTGAAGGTTCACTCC+GGG | + | chr4_1:71379993-71380012 | Msa0569490:CDS | 60.0% | |
| GCCCCTCAGTCAACTAGTGC+TGG | - | chr4_1:71383363-71383382 | None:intergenic | 60.0% | |
| CGCCACTGTTGCCGGAGTCA+TGG | + | chr4_1:71379768-71379787 | Msa0569490:CDS | 65.0% | |
| GAGGTTGACGGCTGAGGCGT+TGG | - | chr4_1:71379810-71379829 | None:intergenic | 65.0% | |
| ACTGCGGAGGTTGACGGCTG+AGG | - | chr4_1:71379816-71379835 | None:intergenic | 65.0% | |
| TCCGGCGTTCAAATGGCCGG+CGG | + | chr4_1:71379878-71379897 | Msa0569490:CDS | 65.0% | |
| TCAAATGGCCGGCGGGGGAT+CGG | + | chr4_1:71379886-71379905 | Msa0569490:CDS | 65.0% | |
| GGAAGAGGAGGAGCCGGTGA+AGG | + | chr4_1:71379982-71380001 | Msa0569490:CDS | 65.0% | |
| CCCGCCGGCCATTTGAACGC+CGG | - | chr4_1:71379882-71379901 | None:intergenic | 70.0% | |
| CCGGCGTTCAAATGGCCGGC+GGG | + | chr4_1:71379879-71379898 | Msa0569490:CDS | 70.0% | |
| CGGCGTTCAAATGGCCGGCG+GGG | + | chr4_1:71379880-71379899 | Msa0569490:CDS | 70.0% | |
| GGCGTTCAAATGGCCGGCGG+GGG | + | chr4_1:71379881-71379900 | Msa0569490:CDS | 70.0% | |
| ACTCGGATCCGATCCCCCGC+CGG | - | chr4_1:71379897-71379916 | None:intergenic | 70.0% | |
| GCGGGGGATCGGATCCGAGT+TGG | + | chr4_1:71379897-71379916 | Msa0569490:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 71379421 | 71386805 | 71379421 | ID=Msa0569490;Name=Msa0569490 |
| chr4_1 | mRNA | 71379421 | 71386805 | 71379421 | ID=Msa0569490-mRNA-1;Parent=Msa0569490;Name=Msa0569490-mRNA-1;_AED=0.03;_eAED=0.03;_QI=94|1|1|1|1|1|4|186|634 |
| chr4_1 | exon | 71379421 | 71379537 | 71379421 | ID=Msa0569490-mRNA-1:exon:24163;Parent=Msa0569490-mRNA-1 |
| chr4_1 | exon | 71379727 | 71380060 | 71379727 | ID=Msa0569490-mRNA-1:exon:24164;Parent=Msa0569490-mRNA-1 |
| chr4_1 | exon | 71384582 | 71385313 | 71384582 | ID=Msa0569490-mRNA-1:exon:24165;Parent=Msa0569490-mRNA-1 |
| chr4_1 | exon | 71385804 | 71386805 | 71385804 | ID=Msa0569490-mRNA-1:exon:24166;Parent=Msa0569490-mRNA-1 |
| chr4_1 | five_prime_UTR | 71379421 | 71379514 | 71379421 | ID=Msa0569490-mRNA-1:five_prime_utr;Parent=Msa0569490-mRNA-1 |
| chr4_1 | CDS | 71379515 | 71379537 | 71379515 | ID=Msa0569490-mRNA-1:cds;Parent=Msa0569490-mRNA-1 |
| chr4_1 | CDS | 71379727 | 71380060 | 71379727 | ID=Msa0569490-mRNA-1:cds;Parent=Msa0569490-mRNA-1 |
| chr4_1 | CDS | 71384582 | 71385313 | 71384582 | ID=Msa0569490-mRNA-1:cds;Parent=Msa0569490-mRNA-1 |
| chr4_1 | CDS | 71385804 | 71386619 | 71385804 | ID=Msa0569490-mRNA-1:cds;Parent=Msa0569490-mRNA-1 |
| chr4_1 | three_prime_UTR | 71386620 | 71386805 | 71386620 | ID=Msa0569490-mRNA-1:three_prime_utr;Parent=Msa0569490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
