Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0570080 | XP_003630432.2 | 98.438 | 192 | 3 | 0 | 67 | 258 | 1 | 192 | 1.35e-133 | 385 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0570080 | sp|Q9FNP0|VQ31_ARATH | 56.983 | 179 | 55 | 6 | 82 | 257 | 13 | 172 | 7.55e-44 | 149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0570080 | G7LGI0 | 98.438 | 192 | 3 | 0 | 67 | 258 | 1 | 192 | 6.44e-134 | 385 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0570080 | Msa0706200 | 0.827986 | 1.155076e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0570080 | MtrunA17_Chr8g0385371 | 98.438 | 192 | 3 | 0 | 67 | 258 | 1 | 192 | 1.24e-137 | 385 |
| Msa0570080 | MtrunA17_Chr4g0047141 | 34.574 | 188 | 89 | 7 | 86 | 254 | 61 | 233 | 5.93e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0570080 | AT5G08480.2 | 56.983 | 179 | 55 | 6 | 82 | 257 | 13 | 172 | 7.67e-45 | 149 |
| Msa0570080 | AT5G08480.3 | 56.983 | 179 | 55 | 6 | 82 | 257 | 13 | 172 | 7.67e-45 | 149 |
| Msa0570080 | AT5G08480.1 | 47.486 | 179 | 41 | 5 | 82 | 257 | 13 | 141 | 2.92e-30 | 110 |
| Msa0570080 | AT5G53830.1 | 31.313 | 198 | 98 | 4 | 86 | 252 | 49 | 239 | 8.76e-11 | 60.8 |
Find 58 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACAAACACAGGTGCATTT+AGG | 0.187922 | 4_1:-72163906 | Msa0570080:CDS |
| ACTTCCATTCCAATTGTTAT+AGG | 0.189308 | 4_1:-72165717 | Msa0570080:CDS |
| GTTCTCTCAGTTAACTATTA+TGG | 0.217006 | 4_1:-72163602 | Msa0570080:CDS |
| TTCCTTCTTTCATGGAGTTT+TGG | 0.237618 | 4_1:+72163790 | None:intergenic |
| TCATGCATTTCCTTCTTTCA+TGG | 0.261349 | 4_1:+72163782 | None:intergenic |
| GGTGGTGTTCTCTTCGTAAT+AGG | 0.264699 | 4_1:+72163811 | None:intergenic |
| GGAAACAAGTTAAGCAATTC+TGG | 0.276480 | 4_1:+72163454 | None:intergenic |
| GGTTTAACAATCTCAAGTTT+TGG | 0.319524 | 4_1:+72163757 | None:intergenic |
| CACAAACACAGGTGCATTTA+GGG | 0.321361 | 4_1:-72163905 | Msa0570080:CDS |
| TTTCCTTCAAGTCCTGTATC+AGG | 0.338299 | 4_1:-72163673 | Msa0570080:CDS |
| TACTACCATCAAATCATCTT+AGG | 0.354983 | 4_1:-72165583 | Msa0570080:intron |
| GAAGTAGTGCAAAGATTAAC+AGG | 0.361566 | 4_1:-72163883 | Msa0570080:CDS |
| TGTTTGTGATATTGAAGATT+TGG | 0.376002 | 4_1:+72163736 | None:intergenic |
| TAGGTGCAACCTTTGTAGTT+TGG | 0.379631 | 4_1:+72163830 | None:intergenic |
| GTGTGAACAAATGTTGTTAG+TGG | 0.401194 | 4_1:+72163925 | None:intergenic |
| GCCTACCTAAGATGATTTGA+TGG | 0.404787 | 4_1:+72165578 | None:intergenic |
| AGAGAGAATCCTATAACAAT+TGG | 0.413225 | 4_1:+72165708 | None:intergenic |
| TTACATACTTCATACATATA+AGG | 0.419143 | 4_1:+72163375 | None:intergenic |
| GTTTCCCCTGGCATCTCCTA+AGG | 0.433786 | 4_1:-72163437 | Msa0570080:CDS |
| CCAGTACATGGTTCAACAAC+AGG | 0.437636 | 4_1:-72163958 | Msa0570080:CDS |
| CATACTTTCTCACATGCCTT+AGG | 0.439034 | 4_1:+72163421 | None:intergenic |
| TTTGTTGCATTGCCTTCTGA+GGG | 0.457769 | 4_1:+72163859 | None:intergenic |
| GAATTTCTTGACTTAGAAGA+AGG | 0.481290 | 4_1:+72163700 | None:intergenic |
| CACATGCCTTAGGAGATGCC+AGG | 0.488880 | 4_1:+72163431 | None:intergenic |
| GAACTTCCACTACCTGATAC+AGG | 0.493636 | 4_1:+72163661 | None:intergenic |
| ATTGCTTAACTTGTTTCCCC+TGG | 0.497376 | 4_1:-72163449 | Msa0570080:CDS |
| CTACCTGATACAGGACTTGA+AGG | 0.504395 | 4_1:+72163670 | None:intergenic |
| TCAAGTCCTGTATCAGGTAG+TGG | 0.519505 | 4_1:-72163667 | Msa0570080:CDS |
| AACTGAGAGAACAATGTTGA+AGG | 0.523337 | 4_1:+72163613 | None:intergenic |
| GAATATAAATCTGATTGTGA+TGG | 0.525782 | 4_1:-72163995 | Msa0570080:CDS |
| AAGCCACTTGCTTTAGACCT+CGG | 0.535231 | 4_1:+72163484 | None:intergenic |
| GTTGAAGGTGTGGTAGGGCT+TGG | 0.537028 | 4_1:+72163628 | None:intergenic |
| AAACATAGAAGAAGAAGAGA+AGG | 0.543044 | 4_1:-72163542 | Msa0570080:CDS |
| CACCAAAACTCCATGAAAGA+AGG | 0.543366 | 4_1:-72163792 | Msa0570080:CDS |
| AATATAAATCTGATTGTGAT+GGG | 0.544660 | 4_1:-72163994 | Msa0570080:CDS |
| GAATCCTATAACAATTGGAA+TGG | 0.547349 | 4_1:+72165713 | None:intergenic |
| ATGGAGAAGCCACCAGTACA+TGG | 0.555074 | 4_1:-72163970 | Msa0570080:CDS |
| AACAATGTTGAAGGTGTGGT+AGG | 0.558962 | 4_1:+72163622 | None:intergenic |
| CCTGTTGTTGAACCATGTAC+TGG | 0.565708 | 4_1:+72163958 | None:intergenic |
| AAATCTGATTGTGATGGGAA+TGG | 0.567485 | 4_1:-72163989 | Msa0570080:CDS |
| AGATTAACAGGTCCCTCAGA+AGG | 0.568541 | 4_1:-72163871 | Msa0570080:CDS |
| ACATGCCTTAGGAGATGCCA+GGG | 0.591334 | 4_1:+72163432 | None:intergenic |
| ACAATGTTGAAGGTGTGGTA+GGG | 0.605585 | 4_1:+72163623 | None:intergenic |
| GTTGTTGAACCATGTACTGG+TGG | 0.616693 | 4_1:+72163961 | None:intergenic |
| TGGAAGATGAAAAGAAACAA+GGG | 0.617549 | 4_1:-72163582 | Msa0570080:CDS |
| TGTGAGAAAGTATGATCTTG+AGG | 0.618559 | 4_1:-72163412 | Msa0570080:exon |
| ACATTTGTTCACACAAACAC+AGG | 0.619702 | 4_1:-72163916 | Msa0570080:CDS |
| ATGGAAGATGAAAAGAAACA+AGG | 0.623994 | 4_1:-72163583 | Msa0570080:CDS |
| CTTCAATATCACAAACAACC+AGG | 0.631097 | 4_1:-72163730 | Msa0570080:CDS |
| TTTATTTGCATCCGTCTCCG+AGG | 0.631935 | 4_1:-72163501 | Msa0570080:CDS |
| AGAAGGCTATCAAAGAGAGA+CGG | 0.642964 | 4_1:-72163525 | Msa0570080:CDS |
| AAAAGAAGACCAAACTACAA+AGG | 0.646353 | 4_1:-72163839 | Msa0570080:CDS |
| TCTCCGAGGTCTAAAGCAAG+TGG | 0.647173 | 4_1:-72163487 | Msa0570080:CDS |
| CTTGCTTTAGACCTCGGAGA+CGG | 0.648497 | 4_1:+72163490 | None:intergenic |
| TTAGAAGAAGGTGATGCACC+TGG | 0.665275 | 4_1:+72163712 | None:intergenic |
| AGAGAACAATGTTGAAGGTG+TGG | 0.676742 | 4_1:+72163618 | None:intergenic |
| GAATATTTGTAGGTGAGGTG+TGG | 0.697484 | 4_1:-72164023 | Msa0570080:intron |
| CATGCCTTAGGAGATGCCAG+GGG | 0.768725 | 4_1:+72163433 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAGATGAGAAAAAAAAA+AGG | + | chr4_1:72163421-72163440 | None:intergenic | 15.0% |
| !!! | TTTGAGAGAATATAATTTTA+CGG | - | chr4_1:72163995-72164014 | Msa0570080:CDS | 15.0% |
| !! | AAACAGAAAAATAACATTAT+TGG | - | chr4_1:72164118-72164137 | Msa0570080:intron | 15.0% |
| !! | AATAAGATGAGAAAAAAAAA+AGG | + | chr4_1:72163421-72163440 | None:intergenic | 15.0% |
| !!! | TTTGAGAGAATATAATTTTA+CGG | - | chr4_1:72163995-72164014 | Msa0570080:CDS | 15.0% |
| !! | AAACAGAAAAATAACATTAT+TGG | - | chr4_1:72164118-72164137 | Msa0570080:intron | 15.0% |
| !! | TGAGAAAAAAAAAAGGAAAA+AGG | + | chr4_1:72163414-72163433 | None:intergenic | 20.0% |
| !! | ACATAGAAAACTAAAATGAA+AGG | + | chr4_1:72163532-72163551 | None:intergenic | 20.0% |
| !! | TTGAATTCATCTTATATTTG+TGG | - | chr4_1:72163635-72163654 | Msa0570080:CDS | 20.0% |
| !! | TTTGTAATTCATAAGAGAAA+TGG | - | chr4_1:72163798-72163817 | Msa0570080:CDS | 20.0% |
| !! | CTATTAAATCCTATTTAGTT+TGG | + | chr4_1:72163874-72163893 | None:intergenic | 20.0% |
| !!! | AATAATCATGTTCTAGAAAA+GGG | + | chr4_1:72164384-72164403 | None:intergenic | 20.0% |
| !!! | TAATAATCATGTTCTAGAAA+AGG | + | chr4_1:72164385-72164404 | None:intergenic | 20.0% |
| !!! | TTTCTAGAACATGATTATTA+AGG | - | chr4_1:72164385-72164404 | Msa0570080:intron | 20.0% |
| !!! | TTCTAGAACATGATTATTAA+GGG | - | chr4_1:72164386-72164405 | Msa0570080:intron | 20.0% |
| !! | ATGTCTTATCAATTTAGATT+CGG | + | chr4_1:72164474-72164493 | None:intergenic | 20.0% |
| !! | ATGTCATATCAAATAATTCA+GGG | + | chr4_1:72164498-72164517 | None:intergenic | 20.0% |
| !!! | TTCATACAAATAGCATTTTT+CGG | - | chr4_1:72164954-72164973 | Msa0570080:intron | 20.0% |
| !! | TAATCATCATGAATATTTGT+AGG | - | chr4_1:72165040-72165059 | Msa0570080:intron | 20.0% |
| !! | AATATAAATCTGATTGTGAT+GGG | - | chr4_1:72165079-72165098 | Msa0570080:intron | 20.0% |
| !! | TTACATACTTCATACATATA+AGG | + | chr4_1:72165701-72165720 | None:intergenic | 20.0% |
| !! | TGAGAAAAAAAAAAGGAAAA+AGG | + | chr4_1:72163414-72163433 | None:intergenic | 20.0% |
| !! | ACATAGAAAACTAAAATGAA+AGG | + | chr4_1:72163532-72163551 | None:intergenic | 20.0% |
| !! | TTGAATTCATCTTATATTTG+TGG | - | chr4_1:72163635-72163654 | Msa0570080:CDS | 20.0% |
| !! | TTTGTAATTCATAAGAGAAA+TGG | - | chr4_1:72163798-72163817 | Msa0570080:CDS | 20.0% |
| !! | CTATTAAATCCTATTTAGTT+TGG | + | chr4_1:72163874-72163893 | None:intergenic | 20.0% |
| !!! | AATAATCATGTTCTAGAAAA+GGG | + | chr4_1:72164384-72164403 | None:intergenic | 20.0% |
| !!! | TAATAATCATGTTCTAGAAA+AGG | + | chr4_1:72164385-72164404 | None:intergenic | 20.0% |
| !!! | TTTCTAGAACATGATTATTA+AGG | - | chr4_1:72164385-72164404 | Msa0570080:intron | 20.0% |
| !!! | TTCTAGAACATGATTATTAA+GGG | - | chr4_1:72164386-72164405 | Msa0570080:intron | 20.0% |
| !! | ATGTCTTATCAATTTAGATT+CGG | + | chr4_1:72164474-72164493 | None:intergenic | 20.0% |
| !! | ATGTCATATCAAATAATTCA+GGG | + | chr4_1:72164498-72164517 | None:intergenic | 20.0% |
| !!! | TTCATACAAATAGCATTTTT+CGG | - | chr4_1:72164954-72164973 | Msa0570080:intron | 20.0% |
| !! | TAATCATCATGAATATTTGT+AGG | - | chr4_1:72165040-72165059 | Msa0570080:intron | 20.0% |
| !! | AATATAAATCTGATTGTGAT+GGG | - | chr4_1:72165079-72165098 | Msa0570080:intron | 20.0% |
| !! | TTACATACTTCATACATATA+AGG | + | chr4_1:72165701-72165720 | None:intergenic | 20.0% |
| !!! | TCTCATCTTATTTTCTTCTT+TGG | - | chr4_1:72163429-72163448 | Msa0570080:CDS | 25.0% |
| !! | TTTTCTATGTTTCTTAATCG+TGG | - | chr4_1:72163542-72163561 | Msa0570080:CDS | 25.0% |
| ! | ATTTGAACCATTAAATTGAG+AGG | + | chr4_1:72163768-72163787 | None:intergenic | 25.0% |
| ! | CAGAAAAATAACATTATTGG+AGG | - | chr4_1:72164121-72164140 | Msa0570080:intron | 25.0% |
| ! | ATAACTCACTAATTTAGCAA+TGG | + | chr4_1:72164174-72164193 | None:intergenic | 25.0% |
| ! | ATAAACAGGTAATAAACAGT+TGG | - | chr4_1:72164273-72164292 | Msa0570080:intron | 25.0% |
| ! | TAAACAGGTAATAAACAGTT+GGG | - | chr4_1:72164274-72164293 | Msa0570080:intron | 25.0% |
| ! | TGTCTTATCAATTTAGATTC+GGG | + | chr4_1:72164473-72164492 | None:intergenic | 25.0% |
| ! | CATGTCATATCAAATAATTC+AGG | + | chr4_1:72164499-72164518 | None:intergenic | 25.0% |
| ! | TGCTACAATAAATCTATCTT+TGG | - | chr4_1:72164634-72164653 | Msa0570080:intron | 25.0% |
| !! | TGAAATTCTTATGTTTTGCT+TGG | - | chr4_1:72164762-72164781 | Msa0570080:intron | 25.0% |
| ! | AAGATGGTATTAGAGTTTAT+AGG | + | chr4_1:72164807-72164826 | None:intergenic | 25.0% |
| ! | ATAAACTCTAATACCATCTT+AGG | - | chr4_1:72164807-72164826 | Msa0570080:intron | 25.0% |
| ! | GAATATAAATCTGATTGTGA+TGG | - | chr4_1:72165078-72165097 | Msa0570080:intron | 25.0% |
| ! | TGTTTGTGATATTGAAGATT+TGG | + | chr4_1:72165340-72165359 | None:intergenic | 25.0% |
| !!! | TCTCATCTTATTTTCTTCTT+TGG | - | chr4_1:72163429-72163448 | Msa0570080:CDS | 25.0% |
| !! | TTTTCTATGTTTCTTAATCG+TGG | - | chr4_1:72163542-72163561 | Msa0570080:CDS | 25.0% |
| ! | ATTTGAACCATTAAATTGAG+AGG | + | chr4_1:72163768-72163787 | None:intergenic | 25.0% |
| ! | CAGAAAAATAACATTATTGG+AGG | - | chr4_1:72164121-72164140 | Msa0570080:intron | 25.0% |
| ! | ATAACTCACTAATTTAGCAA+TGG | + | chr4_1:72164174-72164193 | None:intergenic | 25.0% |
| ! | ATAAACAGGTAATAAACAGT+TGG | - | chr4_1:72164273-72164292 | Msa0570080:intron | 25.0% |
| ! | TAAACAGGTAATAAACAGTT+GGG | - | chr4_1:72164274-72164293 | Msa0570080:intron | 25.0% |
| ! | TGTCTTATCAATTTAGATTC+GGG | + | chr4_1:72164473-72164492 | None:intergenic | 25.0% |
| ! | CATGTCATATCAAATAATTC+AGG | + | chr4_1:72164499-72164518 | None:intergenic | 25.0% |
| ! | TGCTACAATAAATCTATCTT+TGG | - | chr4_1:72164634-72164653 | Msa0570080:intron | 25.0% |
| !! | TGAAATTCTTATGTTTTGCT+TGG | - | chr4_1:72164762-72164781 | Msa0570080:intron | 25.0% |
| ! | AAGATGGTATTAGAGTTTAT+AGG | + | chr4_1:72164807-72164826 | None:intergenic | 25.0% |
| ! | ATAAACTCTAATACCATCTT+AGG | - | chr4_1:72164807-72164826 | Msa0570080:intron | 25.0% |
| ! | GAATATAAATCTGATTGTGA+TGG | - | chr4_1:72165078-72165097 | Msa0570080:intron | 25.0% |
| ! | TGTTTGTGATATTGAAGATT+TGG | + | chr4_1:72165340-72165359 | None:intergenic | 25.0% |
| ACTTCCATTCCAATTGTTAT+AGG | - | chr4_1:72163356-72163375 | Msa0570080:three_prime_UTR | 30.0% | |
| GAATCCTATAACAATTGGAA+TGG | + | chr4_1:72163363-72163382 | None:intergenic | 30.0% | |
| AGAGAGAATCCTATAACAAT+TGG | + | chr4_1:72163368-72163387 | None:intergenic | 30.0% | |
| TACTACCATCAAATCATCTT+AGG | - | chr4_1:72163490-72163509 | Msa0570080:CDS | 30.0% | |
| CAATAGGAGTAAACGAATAT+TGG | - | chr4_1:72163705-72163724 | Msa0570080:CDS | 30.0% | |
| CTTCATTCCTCTCAATTTAA+TGG | - | chr4_1:72163758-72163777 | Msa0570080:CDS | 30.0% | |
| GTAATTCATAAGAGAAATGG+TGG | - | chr4_1:72163801-72163820 | Msa0570080:CDS | 30.0% | |
| ! | TTTAATAGCTTTGCAATGTG+CGG | - | chr4_1:72163886-72163905 | Msa0570080:CDS | 30.0% |
| AGAAATAGAAAAGAACAGAC+AGG | - | chr4_1:72164218-72164237 | Msa0570080:intron | 30.0% | |
| GAGTTGCAAAATCTAATCTA+AGG | - | chr4_1:72164310-72164329 | Msa0570080:intron | 30.0% | |
| TGGAGCTATGTATATAATCA+CGG | + | chr4_1:72164440-72164459 | None:intergenic | 30.0% | |
| TGATATGACATGCTTTCAAT+AGG | - | chr4_1:72164507-72164526 | Msa0570080:intron | 30.0% | |
| GATATGACATGCTTTCAATA+GGG | - | chr4_1:72164508-72164527 | Msa0570080:intron | 30.0% | |
| ! | TTCACATTCTAAAGAACATG+TGG | - | chr4_1:72164547-72164566 | Msa0570080:intron | 30.0% |
| ! | TCACATTCTAAAGAACATGT+GGG | - | chr4_1:72164548-72164567 | Msa0570080:intron | 30.0% |
| TGTGAAGAGAAACAAAAAGA+AGG | + | chr4_1:72164682-72164701 | None:intergenic | 30.0% | |
| !! | CTTTTTGTTTCTCTTCACAT+AGG | - | chr4_1:72164683-72164702 | Msa0570080:intron | 30.0% |
| TTTGCAATCAACATAAGAAG+AGG | + | chr4_1:72164733-72164752 | None:intergenic | 30.0% | |
| TTTCATCTTCAAGTATGTCA+TGG | - | chr4_1:72164977-72164996 | Msa0570080:intron | 30.0% | |
| ATCATGAATATTTGTAGGTG+AGG | - | chr4_1:72165045-72165064 | Msa0570080:intron | 30.0% | |
| AAAAGAAGACCAAACTACAA+AGG | - | chr4_1:72165234-72165253 | Msa0570080:intron | 30.0% | |
| ! | GGTTTAACAATCTCAAGTTT+TGG | + | chr4_1:72165319-72165338 | None:intergenic | 30.0% |
| GAATTTCTTGACTTAGAAGA+AGG | + | chr4_1:72165376-72165395 | None:intergenic | 30.0% | |
| GTTCTCTCAGTTAACTATTA+TGG | - | chr4_1:72165471-72165490 | Msa0570080:intron | 30.0% | |
| ATGGAAGATGAAAAGAAACA+AGG | - | chr4_1:72165490-72165509 | Msa0570080:intron | 30.0% | |
| TGGAAGATGAAAAGAAACAA+GGG | - | chr4_1:72165491-72165510 | Msa0570080:intron | 30.0% | |
| AAACATAGAAGAAGAAGAGA+AGG | - | chr4_1:72165531-72165550 | Msa0570080:intron | 30.0% | |
| ACTTCCATTCCAATTGTTAT+AGG | - | chr4_1:72163356-72163375 | Msa0570080:three_prime_UTR | 30.0% | |
| GAATCCTATAACAATTGGAA+TGG | + | chr4_1:72163363-72163382 | None:intergenic | 30.0% | |
| AGAGAGAATCCTATAACAAT+TGG | + | chr4_1:72163368-72163387 | None:intergenic | 30.0% | |
| TACTACCATCAAATCATCTT+AGG | - | chr4_1:72163490-72163509 | Msa0570080:CDS | 30.0% | |
| CAATAGGAGTAAACGAATAT+TGG | - | chr4_1:72163705-72163724 | Msa0570080:CDS | 30.0% | |
| CTTCATTCCTCTCAATTTAA+TGG | - | chr4_1:72163758-72163777 | Msa0570080:CDS | 30.0% | |
| GTAATTCATAAGAGAAATGG+TGG | - | chr4_1:72163801-72163820 | Msa0570080:CDS | 30.0% | |
| ! | TTTAATAGCTTTGCAATGTG+CGG | - | chr4_1:72163886-72163905 | Msa0570080:CDS | 30.0% |
| AGAAATAGAAAAGAACAGAC+AGG | - | chr4_1:72164218-72164237 | Msa0570080:intron | 30.0% | |
| GAGTTGCAAAATCTAATCTA+AGG | - | chr4_1:72164310-72164329 | Msa0570080:intron | 30.0% | |
| TGGAGCTATGTATATAATCA+CGG | + | chr4_1:72164440-72164459 | None:intergenic | 30.0% | |
| TGATATGACATGCTTTCAAT+AGG | - | chr4_1:72164507-72164526 | Msa0570080:intron | 30.0% | |
| GATATGACATGCTTTCAATA+GGG | - | chr4_1:72164508-72164527 | Msa0570080:intron | 30.0% | |
| ! | TTCACATTCTAAAGAACATG+TGG | - | chr4_1:72164547-72164566 | Msa0570080:intron | 30.0% |
| ! | TCACATTCTAAAGAACATGT+GGG | - | chr4_1:72164548-72164567 | Msa0570080:intron | 30.0% |
| TGTGAAGAGAAACAAAAAGA+AGG | + | chr4_1:72164682-72164701 | None:intergenic | 30.0% | |
| !! | CTTTTTGTTTCTCTTCACAT+AGG | - | chr4_1:72164683-72164702 | Msa0570080:intron | 30.0% |
| TTTGCAATCAACATAAGAAG+AGG | + | chr4_1:72164733-72164752 | None:intergenic | 30.0% | |
| TTTCATCTTCAAGTATGTCA+TGG | - | chr4_1:72164977-72164996 | Msa0570080:intron | 30.0% | |
| ATCATGAATATTTGTAGGTG+AGG | - | chr4_1:72165045-72165064 | Msa0570080:intron | 30.0% | |
| AAAAGAAGACCAAACTACAA+AGG | - | chr4_1:72165234-72165253 | Msa0570080:intron | 30.0% | |
| ! | GGTTTAACAATCTCAAGTTT+TGG | + | chr4_1:72165319-72165338 | None:intergenic | 30.0% |
| GAATTTCTTGACTTAGAAGA+AGG | + | chr4_1:72165376-72165395 | None:intergenic | 30.0% | |
| GTTCTCTCAGTTAACTATTA+TGG | - | chr4_1:72165471-72165490 | Msa0570080:intron | 30.0% | |
| ATGGAAGATGAAAAGAAACA+AGG | - | chr4_1:72165490-72165509 | Msa0570080:intron | 30.0% | |
| TGGAAGATGAAAAGAAACAA+GGG | - | chr4_1:72165491-72165510 | Msa0570080:intron | 30.0% | |
| AAACATAGAAGAAGAAGAGA+AGG | - | chr4_1:72165531-72165550 | Msa0570080:intron | 30.0% | |
| ACCATCAAATCATCTTAGGT+AGG | - | chr4_1:72163494-72163513 | Msa0570080:CDS | 35.0% | |
| !! | TGTTTGCTTGTTGTATCATG+TGG | - | chr4_1:72163582-72163601 | Msa0570080:CDS | 35.0% |
| ATTCGTTTACTCCTATTGTG+TGG | + | chr4_1:72163703-72163722 | None:intergenic | 35.0% | |
| TAGGAGTAAACGAATATTGG+AGG | - | chr4_1:72163708-72163727 | Msa0570080:CDS | 35.0% | |
| AGTCAAGCAATCGCTAATAA+TGG | + | chr4_1:72163851-72163870 | None:intergenic | 35.0% | |
| TGCTTGACTCCAAACTAAAT+AGG | - | chr4_1:72163862-72163881 | Msa0570080:CDS | 35.0% | |
| ! | CATTTTCTCAACCCGAAATT+CGG | - | chr4_1:72163924-72163943 | Msa0570080:CDS | 35.0% |
| TCATACAACAATAGCAGTAG+AGG | - | chr4_1:72164035-72164054 | Msa0570080:intron | 35.0% | |
| AACAGACAAACGGTTAACTT+TGG | + | chr4_1:72164149-72164168 | None:intergenic | 35.0% | |
| AGCAATGGATAACAGACAAA+CGG | + | chr4_1:72164159-72164178 | None:intergenic | 35.0% | |
| CTGTTTATCTTTGACTCTTG+AGG | + | chr4_1:72164261-72164280 | None:intergenic | 35.0% | |
| CTCAAGAGTCAAAGATAAAC+AGG | - | chr4_1:72164259-72164278 | Msa0570080:intron | 35.0% | |
| !! | ATCATGTTCTAGAAAAGGGT+AGG | + | chr4_1:72164380-72164399 | None:intergenic | 35.0% |
| GGAGCTATGTATATAATCAC+GGG | + | chr4_1:72164439-72164458 | None:intergenic | 35.0% | |
| !!! | TAGATTCGGGAAGAGTTTTT+TGG | + | chr4_1:72164460-72164479 | None:intergenic | 35.0% |
| ! | CACATTCTAAAGAACATGTG+GGG | - | chr4_1:72164549-72164568 | Msa0570080:intron | 35.0% |
| CTTCACAAAATCAGCTTGTA+AGG | - | chr4_1:72164847-72164866 | Msa0570080:intron | 35.0% | |
| ! | AAATCTGATTGTGATGGGAA+TGG | - | chr4_1:72165084-72165103 | Msa0570080:intron | 35.0% |
| GTGTGAACAAATGTTGTTAG+TGG | + | chr4_1:72165151-72165170 | None:intergenic | 35.0% | |
| ACATTTGTTCACACAAACAC+AGG | - | chr4_1:72165157-72165176 | Msa0570080:intron | 35.0% | |
| GAAGTAGTGCAAAGATTAAC+AGG | - | chr4_1:72165190-72165209 | Msa0570080:intron | 35.0% | |
| ! | TTCCTTCTTTCATGGAGTTT+TGG | + | chr4_1:72165286-72165305 | None:intergenic | 35.0% |
| TCATGCATTTCCTTCTTTCA+TGG | + | chr4_1:72165294-72165313 | None:intergenic | 35.0% | |
| CTTCAATATCACAAACAACC+AGG | - | chr4_1:72165343-72165362 | Msa0570080:intron | 35.0% | |
| AACTGAGAGAACAATGTTGA+AGG | + | chr4_1:72165463-72165482 | None:intergenic | 35.0% | |
| GGAAACAAGTTAAGCAATTC+TGG | + | chr4_1:72165622-72165641 | None:intergenic | 35.0% | |
| ! | TGTGAGAAAGTATGATCTTG+AGG | - | chr4_1:72165661-72165680 | Msa0570080:CDS | 35.0% |
| ACCATCAAATCATCTTAGGT+AGG | - | chr4_1:72163494-72163513 | Msa0570080:CDS | 35.0% | |
| !! | TGTTTGCTTGTTGTATCATG+TGG | - | chr4_1:72163582-72163601 | Msa0570080:CDS | 35.0% |
| ATTCGTTTACTCCTATTGTG+TGG | + | chr4_1:72163703-72163722 | None:intergenic | 35.0% | |
| TAGGAGTAAACGAATATTGG+AGG | - | chr4_1:72163708-72163727 | Msa0570080:CDS | 35.0% | |
| AGTCAAGCAATCGCTAATAA+TGG | + | chr4_1:72163851-72163870 | None:intergenic | 35.0% | |
| TGCTTGACTCCAAACTAAAT+AGG | - | chr4_1:72163862-72163881 | Msa0570080:CDS | 35.0% | |
| ! | CATTTTCTCAACCCGAAATT+CGG | - | chr4_1:72163924-72163943 | Msa0570080:CDS | 35.0% |
| TCATACAACAATAGCAGTAG+AGG | - | chr4_1:72164035-72164054 | Msa0570080:intron | 35.0% | |
| AACAGACAAACGGTTAACTT+TGG | + | chr4_1:72164149-72164168 | None:intergenic | 35.0% | |
| AGCAATGGATAACAGACAAA+CGG | + | chr4_1:72164159-72164178 | None:intergenic | 35.0% | |
| CTGTTTATCTTTGACTCTTG+AGG | + | chr4_1:72164261-72164280 | None:intergenic | 35.0% | |
| CTCAAGAGTCAAAGATAAAC+AGG | - | chr4_1:72164259-72164278 | Msa0570080:intron | 35.0% | |
| !! | ATCATGTTCTAGAAAAGGGT+AGG | + | chr4_1:72164380-72164399 | None:intergenic | 35.0% |
| GGAGCTATGTATATAATCAC+GGG | + | chr4_1:72164439-72164458 | None:intergenic | 35.0% | |
| !!! | TAGATTCGGGAAGAGTTTTT+TGG | + | chr4_1:72164460-72164479 | None:intergenic | 35.0% |
| ! | CACATTCTAAAGAACATGTG+GGG | - | chr4_1:72164549-72164568 | Msa0570080:intron | 35.0% |
| CTTCACAAAATCAGCTTGTA+AGG | - | chr4_1:72164847-72164866 | Msa0570080:intron | 35.0% | |
| ! | AAATCTGATTGTGATGGGAA+TGG | - | chr4_1:72165084-72165103 | Msa0570080:intron | 35.0% |
| GTGTGAACAAATGTTGTTAG+TGG | + | chr4_1:72165151-72165170 | None:intergenic | 35.0% | |
| ACATTTGTTCACACAAACAC+AGG | - | chr4_1:72165157-72165176 | Msa0570080:intron | 35.0% | |
| GAAGTAGTGCAAAGATTAAC+AGG | - | chr4_1:72165190-72165209 | Msa0570080:intron | 35.0% | |
| ! | TTCCTTCTTTCATGGAGTTT+TGG | + | chr4_1:72165286-72165305 | None:intergenic | 35.0% |
| TCATGCATTTCCTTCTTTCA+TGG | + | chr4_1:72165294-72165313 | None:intergenic | 35.0% | |
| CTTCAATATCACAAACAACC+AGG | - | chr4_1:72165343-72165362 | Msa0570080:intron | 35.0% | |
| AACTGAGAGAACAATGTTGA+AGG | + | chr4_1:72165463-72165482 | None:intergenic | 35.0% | |
| GGAAACAAGTTAAGCAATTC+TGG | + | chr4_1:72165622-72165641 | None:intergenic | 35.0% | |
| ! | TGTGAGAAAGTATGATCTTG+AGG | - | chr4_1:72165661-72165680 | Msa0570080:CDS | 35.0% |
| GCCTACCTAAGATGATTTGA+TGG | + | chr4_1:72163498-72163517 | None:intergenic | 40.0% | |
| !! | GCTTGTTGTATCATGTGGTT+TGG | - | chr4_1:72163587-72163606 | Msa0570080:CDS | 40.0% |
| TTGTGTGGTATCAAGGGAAA+GGG | + | chr4_1:72163688-72163707 | None:intergenic | 40.0% | |
| ATTGTGTGGTATCAAGGGAA+AGG | + | chr4_1:72163689-72163708 | None:intergenic | 40.0% | |
| TTCCCTTGATACCACACAAT+AGG | - | chr4_1:72163689-72163708 | Msa0570080:CDS | 40.0% | |
| CTCCTATTGTGTGGTATCAA+GGG | + | chr4_1:72163694-72163713 | None:intergenic | 40.0% | |
| ACTCCTATTGTGTGGTATCA+AGG | + | chr4_1:72163695-72163714 | None:intergenic | 40.0% | |
| CCATAGAGAATCCGAATTTC+GGG | + | chr4_1:72163938-72163957 | None:intergenic | 40.0% | |
| GCCATAGAGAATCCGAATTT+CGG | + | chr4_1:72163939-72163958 | None:intergenic | 40.0% | |
| AGGATCCAAATTCCTCAAGT+TGG | - | chr4_1:72164055-72164074 | Msa0570080:intron | 40.0% | |
| GGATCCAAATTCCTCAAGTT+GGG | - | chr4_1:72164056-72164075 | Msa0570080:intron | 40.0% | |
| TTATATGTCGTCCCAACTTG+AGG | + | chr4_1:72164070-72164089 | None:intergenic | 40.0% | |
| GACTCTTGAGGTCTTAGAAT+TGG | + | chr4_1:72164249-72164268 | None:intergenic | 40.0% | |
| CTCAGACTCAAAACCTAAGA+TGG | + | chr4_1:72164823-72164842 | None:intergenic | 40.0% | |
| CAAAATCAGCTTGTAAGGTG+AGG | - | chr4_1:72164852-72164871 | Msa0570080:intron | 40.0% | |
| GAATATTTGTAGGTGAGGTG+TGG | - | chr4_1:72165050-72165069 | Msa0570080:intron | 40.0% | |
| ACACAAACACAGGTGCATTT+AGG | - | chr4_1:72165167-72165186 | Msa0570080:intron | 40.0% | |
| CACAAACACAGGTGCATTTA+GGG | - | chr4_1:72165168-72165187 | Msa0570080:intron | 40.0% | |
| TTTGTTGCATTGCCTTCTGA+GGG | + | chr4_1:72165217-72165236 | None:intergenic | 40.0% | |
| ! | TTTTGTTGCATTGCCTTCTG+AGG | + | chr4_1:72165218-72165237 | None:intergenic | 40.0% |
| TAGGTGCAACCTTTGTAGTT+TGG | + | chr4_1:72165246-72165265 | None:intergenic | 40.0% | |
| !! | CTTCTTTCATGGAGTTTTGG+TGG | + | chr4_1:72165283-72165302 | None:intergenic | 40.0% |
| CACCAAAACTCCATGAAAGA+AGG | - | chr4_1:72165281-72165300 | Msa0570080:intron | 40.0% | |
| TTTCCTTCAAGTCCTGTATC+AGG | - | chr4_1:72165400-72165419 | Msa0570080:intron | 40.0% | |
| ! | ACAATGTTGAAGGTGTGGTA+GGG | + | chr4_1:72165453-72165472 | None:intergenic | 40.0% |
| ! | AACAATGTTGAAGGTGTGGT+AGG | + | chr4_1:72165454-72165473 | None:intergenic | 40.0% |
| AGAGAACAATGTTGAAGGTG+TGG | + | chr4_1:72165458-72165477 | None:intergenic | 40.0% | |
| AGAAGGCTATCAAAGAGAGA+CGG | - | chr4_1:72165548-72165567 | Msa0570080:intron | 40.0% | |
| !! | ATTGCTTAACTTGTTTCCCC+TGG | - | chr4_1:72165624-72165643 | Msa0570080:CDS | 40.0% |
| CATACTTTCTCACATGCCTT+AGG | + | chr4_1:72165655-72165674 | None:intergenic | 40.0% | |
| GCCTACCTAAGATGATTTGA+TGG | + | chr4_1:72163498-72163517 | None:intergenic | 40.0% | |
| !! | GCTTGTTGTATCATGTGGTT+TGG | - | chr4_1:72163587-72163606 | Msa0570080:CDS | 40.0% |
| TTGTGTGGTATCAAGGGAAA+GGG | + | chr4_1:72163688-72163707 | None:intergenic | 40.0% | |
| ATTGTGTGGTATCAAGGGAA+AGG | + | chr4_1:72163689-72163708 | None:intergenic | 40.0% | |
| TTCCCTTGATACCACACAAT+AGG | - | chr4_1:72163689-72163708 | Msa0570080:CDS | 40.0% | |
| CTCCTATTGTGTGGTATCAA+GGG | + | chr4_1:72163694-72163713 | None:intergenic | 40.0% | |
| ACTCCTATTGTGTGGTATCA+AGG | + | chr4_1:72163695-72163714 | None:intergenic | 40.0% | |
| CCATAGAGAATCCGAATTTC+GGG | + | chr4_1:72163938-72163957 | None:intergenic | 40.0% | |
| GCCATAGAGAATCCGAATTT+CGG | + | chr4_1:72163939-72163958 | None:intergenic | 40.0% | |
| AGGATCCAAATTCCTCAAGT+TGG | - | chr4_1:72164055-72164074 | Msa0570080:intron | 40.0% | |
| GGATCCAAATTCCTCAAGTT+GGG | - | chr4_1:72164056-72164075 | Msa0570080:intron | 40.0% | |
| TTATATGTCGTCCCAACTTG+AGG | + | chr4_1:72164070-72164089 | None:intergenic | 40.0% | |
| GACTCTTGAGGTCTTAGAAT+TGG | + | chr4_1:72164249-72164268 | None:intergenic | 40.0% | |
| CTCAGACTCAAAACCTAAGA+TGG | + | chr4_1:72164823-72164842 | None:intergenic | 40.0% | |
| CAAAATCAGCTTGTAAGGTG+AGG | - | chr4_1:72164852-72164871 | Msa0570080:intron | 40.0% | |
| GAATATTTGTAGGTGAGGTG+TGG | - | chr4_1:72165050-72165069 | Msa0570080:intron | 40.0% | |
| ACACAAACACAGGTGCATTT+AGG | - | chr4_1:72165167-72165186 | Msa0570080:intron | 40.0% | |
| CACAAACACAGGTGCATTTA+GGG | - | chr4_1:72165168-72165187 | Msa0570080:intron | 40.0% | |
| TTTGTTGCATTGCCTTCTGA+GGG | + | chr4_1:72165217-72165236 | None:intergenic | 40.0% | |
| ! | TTTTGTTGCATTGCCTTCTG+AGG | + | chr4_1:72165218-72165237 | None:intergenic | 40.0% |
| TAGGTGCAACCTTTGTAGTT+TGG | + | chr4_1:72165246-72165265 | None:intergenic | 40.0% | |
| !! | CTTCTTTCATGGAGTTTTGG+TGG | + | chr4_1:72165283-72165302 | None:intergenic | 40.0% |
| CACCAAAACTCCATGAAAGA+AGG | - | chr4_1:72165281-72165300 | Msa0570080:intron | 40.0% | |
| TTTCCTTCAAGTCCTGTATC+AGG | - | chr4_1:72165400-72165419 | Msa0570080:intron | 40.0% | |
| ! | ACAATGTTGAAGGTGTGGTA+GGG | + | chr4_1:72165453-72165472 | None:intergenic | 40.0% |
| ! | AACAATGTTGAAGGTGTGGT+AGG | + | chr4_1:72165454-72165473 | None:intergenic | 40.0% |
| AGAGAACAATGTTGAAGGTG+TGG | + | chr4_1:72165458-72165477 | None:intergenic | 40.0% | |
| AGAAGGCTATCAAAGAGAGA+CGG | - | chr4_1:72165548-72165567 | Msa0570080:intron | 40.0% | |
| !! | ATTGCTTAACTTGTTTCCCC+TGG | - | chr4_1:72165624-72165643 | Msa0570080:CDS | 40.0% |
| CATACTTTCTCACATGCCTT+AGG | + | chr4_1:72165655-72165674 | None:intergenic | 40.0% | |
| CCCGAAATTCGGATTCTCTA+TGG | - | chr4_1:72163935-72163954 | Msa0570080:CDS | 45.0% | |
| TCGTCCCAACTTGAGGAATT+TGG | + | chr4_1:72164063-72164082 | None:intergenic | 45.0% | |
| ! | AAGGGTAGGCATTTGTTGAC+TGG | + | chr4_1:72164366-72164385 | None:intergenic | 45.0% |
| TCTCTTCACATAGGACTCCT+TGG | - | chr4_1:72164692-72164711 | Msa0570080:intron | 45.0% | |
| !! | GGAGAAAAAGCACTACACCA+AGG | + | chr4_1:72164712-72164731 | None:intergenic | 45.0% |
| GTTGTTGAACCATGTACTGG+TGG | + | chr4_1:72165115-72165134 | None:intergenic | 45.0% | |
| CCTGTTGTTGAACCATGTAC+TGG | + | chr4_1:72165118-72165137 | None:intergenic | 45.0% | |
| CCAGTACATGGTTCAACAAC+AGG | - | chr4_1:72165115-72165134 | Msa0570080:intron | 45.0% | |
| AGATTAACAGGTCCCTCAGA+AGG | - | chr4_1:72165202-72165221 | Msa0570080:intron | 45.0% | |
| GGTGGTGTTCTCTTCGTAAT+AGG | + | chr4_1:72165265-72165284 | None:intergenic | 45.0% | |
| TTAGAAGAAGGTGATGCACC+TGG | + | chr4_1:72165364-72165383 | None:intergenic | 45.0% | |
| CTACCTGATACAGGACTTGA+AGG | + | chr4_1:72165406-72165425 | None:intergenic | 45.0% | |
| TCAAGTCCTGTATCAGGTAG+TGG | - | chr4_1:72165406-72165425 | Msa0570080:intron | 45.0% | |
| GAACTTCCACTACCTGATAC+AGG | + | chr4_1:72165415-72165434 | None:intergenic | 45.0% | |
| TTTATTTGCATCCGTCTCCG+AGG | - | chr4_1:72165572-72165591 | Msa0570080:intron | 45.0% | |
| ! | AAGCCACTTGCTTTAGACCT+CGG | + | chr4_1:72165592-72165611 | None:intergenic | 45.0% |
| CCCGAAATTCGGATTCTCTA+TGG | - | chr4_1:72163935-72163954 | Msa0570080:CDS | 45.0% | |
| TCGTCCCAACTTGAGGAATT+TGG | + | chr4_1:72164063-72164082 | None:intergenic | 45.0% | |
| ! | AAGGGTAGGCATTTGTTGAC+TGG | + | chr4_1:72164366-72164385 | None:intergenic | 45.0% |
| TCTCTTCACATAGGACTCCT+TGG | - | chr4_1:72164692-72164711 | Msa0570080:intron | 45.0% | |
| !! | GGAGAAAAAGCACTACACCA+AGG | + | chr4_1:72164712-72164731 | None:intergenic | 45.0% |
| GTTGTTGAACCATGTACTGG+TGG | + | chr4_1:72165115-72165134 | None:intergenic | 45.0% | |
| CCTGTTGTTGAACCATGTAC+TGG | + | chr4_1:72165118-72165137 | None:intergenic | 45.0% | |
| CCAGTACATGGTTCAACAAC+AGG | - | chr4_1:72165115-72165134 | Msa0570080:intron | 45.0% | |
| AGATTAACAGGTCCCTCAGA+AGG | - | chr4_1:72165202-72165221 | Msa0570080:intron | 45.0% | |
| GGTGGTGTTCTCTTCGTAAT+AGG | + | chr4_1:72165265-72165284 | None:intergenic | 45.0% | |
| TTAGAAGAAGGTGATGCACC+TGG | + | chr4_1:72165364-72165383 | None:intergenic | 45.0% | |
| CTACCTGATACAGGACTTGA+AGG | + | chr4_1:72165406-72165425 | None:intergenic | 45.0% | |
| TCAAGTCCTGTATCAGGTAG+TGG | - | chr4_1:72165406-72165425 | Msa0570080:intron | 45.0% | |
| GAACTTCCACTACCTGATAC+AGG | + | chr4_1:72165415-72165434 | None:intergenic | 45.0% | |
| TTTATTTGCATCCGTCTCCG+AGG | - | chr4_1:72165572-72165591 | Msa0570080:intron | 45.0% | |
| ! | AAGCCACTTGCTTTAGACCT+CGG | + | chr4_1:72165592-72165611 | None:intergenic | 45.0% |
| ATGGAGAAGCCACCAGTACA+TGG | - | chr4_1:72165103-72165122 | Msa0570080:intron | 50.0% | |
| ! | CTTGCTTTAGACCTCGGAGA+CGG | + | chr4_1:72165586-72165605 | None:intergenic | 50.0% |
| ! | TCTCCGAGGTCTAAAGCAAG+TGG | - | chr4_1:72165586-72165605 | Msa0570080:CDS | 50.0% |
| ACATGCCTTAGGAGATGCCA+GGG | + | chr4_1:72165644-72165663 | None:intergenic | 50.0% | |
| ATGGAGAAGCCACCAGTACA+TGG | - | chr4_1:72165103-72165122 | Msa0570080:intron | 50.0% | |
| ! | CTTGCTTTAGACCTCGGAGA+CGG | + | chr4_1:72165586-72165605 | None:intergenic | 50.0% |
| ! | TCTCCGAGGTCTAAAGCAAG+TGG | - | chr4_1:72165586-72165605 | Msa0570080:CDS | 50.0% |
| ACATGCCTTAGGAGATGCCA+GGG | + | chr4_1:72165644-72165663 | None:intergenic | 50.0% | |
| ! | GTTGAAGGTGTGGTAGGGCT+TGG | + | chr4_1:72165448-72165467 | None:intergenic | 55.0% |
| GTTTCCCCTGGCATCTCCTA+AGG | - | chr4_1:72165636-72165655 | Msa0570080:CDS | 55.0% | |
| CATGCCTTAGGAGATGCCAG+GGG | + | chr4_1:72165643-72165662 | None:intergenic | 55.0% | |
| CACATGCCTTAGGAGATGCC+AGG | + | chr4_1:72165645-72165664 | None:intergenic | 55.0% | |
| ! | GTTGAAGGTGTGGTAGGGCT+TGG | + | chr4_1:72165448-72165467 | None:intergenic | 55.0% |
| GTTTCCCCTGGCATCTCCTA+AGG | - | chr4_1:72165636-72165655 | Msa0570080:CDS | 55.0% | |
| CATGCCTTAGGAGATGCCAG+GGG | + | chr4_1:72165643-72165662 | None:intergenic | 55.0% | |
| CACATGCCTTAGGAGATGCC+AGG | + | chr4_1:72165645-72165664 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 72163349 | 72165746 | 72163349 | ID=Msa0570080;Name=Msa0570080 |
| chr4_1 | mRNA | 72163349 | 72165746 | 72163349 | ID=Msa0570080-mRNA-1;Parent=Msa0570080;Name=Msa0570080-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.5|1|0|0.5|2|71|258 |
| chr4_1 | exon | 72163349 | 72164033 | 72163349 | ID=Msa0570080-mRNA-1:exon:24592;Parent=Msa0570080-mRNA-1 |
| chr4_1 | exon | 72165584 | 72165746 | 72165584 | ID=Msa0570080-mRNA-1:exon:24591;Parent=Msa0570080-mRNA-1 |
| chr4_1 | CDS | 72165584 | 72165746 | 72165584 | ID=Msa0570080-mRNA-1:cds;Parent=Msa0570080-mRNA-1 |
| chr4_1 | CDS | 72163420 | 72164033 | 72163420 | ID=Msa0570080-mRNA-1:cds;Parent=Msa0570080-mRNA-1 |
| chr4_1 | three_prime_UTR | 72163349 | 72163419 | 72163349 | ID=Msa0570080-mRNA-1:three_prime_utr;Parent=Msa0570080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
