AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0573540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0573540 MtrunA17_Chr8g0389421 98.171 164 3 0 13 176 857 1020 8.73e-110 335
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0573540 AT5G56730.1 64.901 151 50 2 13 161 858 1007 2.19e-63 210

Find 280 sgRNAs with CRISPR-Local

Find 770 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTGACTTCAAAACCAAATA+TGG 0.182334 4_1:+76759258 Msa0573540:five_prime_UTR
CAAGAGAAATACTCGCTTTC+TGG 0.202305 4_1:-76762807 None:intergenic
CTTTGAACTCACCCCATATT+TGG 0.221929 4_1:-76759271 None:intergenic
AGAGATTGAATCTGCCTATT+TGG 0.223259 4_1:+76758738 Msa0573540:five_prime_UTR
CTGTCTTGTAAATCATTTAC+AGG 0.233962 4_1:+76766338 Msa0573540:CDS
CACTAGGTACTGCAATATTA+AGG 0.236301 4_1:-76764901 None:intergenic
ACTGATTTCAGGAATTTAAA+AGG 0.239098 4_1:-76767583 None:intergenic
AATTGCTGGCCTGGCAGTTT+TGG 0.239834 4_1:+76767744 Msa0573540:CDS
AGAAGCTGAACATGAGAAAT+AGG 0.241964 4_1:-76758443 None:intergenic
GTTATAATATTGGTCTTTAC+TGG 0.244590 4_1:-76758484 None:intergenic
TTACAAAATCAACTGGAAAA+TGG 0.251382 4_1:+76768056 Msa0573540:three_prime_UTR
GTTGCTAGGGTGCGGCTTCA+TGG 0.261905 4_1:+76758670 Msa0573540:five_prime_UTR
TGTTTACCAAAACTACTAAT+TGG 0.263991 4_1:-76768126 None:intergenic
CCGACCATTGCTGGGGAAAT+TGG 0.270674 4_1:+76762840 Msa0573540:five_prime_UTR
TGACAGCCATATTGCATAAA+TGG 0.280422 4_1:-76757917 None:intergenic
GAAAGTATCGGAGCTGAATT+TGG 0.281086 4_1:+76757066 Msa0573540:five_prime_UTR
TGGATTGGAATACTGATTTC+AGG 0.302110 4_1:-76767594 None:intergenic
GTAAATGTCTGTTATTAATA+TGG 0.303921 4_1:-76767798 None:intergenic
TCACGGTTAAAATGCATAAT+AGG 0.305372 4_1:-76765019 None:intergenic
TCACAATTTCTTCAGGAATA+TGG 0.308219 4_1:-76759240 None:intergenic
TCTTTCAGGAAAATTATTAC+TGG 0.319442 4_1:+76766715 Msa0573540:intron
TGCAACTTTACAAAATCAAC+TGG 0.322432 4_1:+76768049 Msa0573540:three_prime_UTR
TGGGTTCTTAAGCAAGCTTC+TGG 0.324282 4_1:+76766014 Msa0573540:five_prime_UTR
TCCCAACAACAGGTTCATTA+TGG 0.325895 4_1:-76758901 None:intergenic
TTTGAAGTCACAATTTCTTC+AGG 0.328204 4_1:-76759247 None:intergenic
ATCTTCACCGGTTATTCATA+TGG 0.328978 4_1:+76762768 Msa0573540:five_prime_UTR
CTTTCACCAATTAGTAGTTT+TGG 0.346000 4_1:+76768120 Msa0573540:three_prime_UTR
GAGTTGATAAAGGTTCATTT+TGG 0.354052 4_1:+76758070 Msa0573540:five_prime_UTR
ATTGTTGTCTCAGGCGATTT+CGG 0.356635 4_1:+76757161 Msa0573540:five_prime_UTR
TCAATGGGACCGACCATTGC+TGG 0.361839 4_1:+76762831 Msa0573540:five_prime_UTR
TACAATATTGTATTTGAGTC+TGG 0.366595 4_1:+76768085 Msa0573540:three_prime_UTR
ACATGATGAAGTTATAATAT+TGG 0.369371 4_1:-76758494 None:intergenic
CTAAATATTCTGAGAAATTA+CGG 0.372204 4_1:+76759089 Msa0573540:five_prime_UTR
TCCACCTATTCCAACATTCC+AGG 0.372222 4_1:+76758117 Msa0573540:five_prime_UTR
AAGTTTGCTTATATTACATA+TGG 0.372441 4_1:-76766288 None:intergenic
GCTGGGGAAATTGGTGTGTT+TGG 0.372812 4_1:+76762849 Msa0573540:five_prime_UTR
TAGAAGAGATTCACTTTGTT+GGG 0.373154 4_1:+76765995 Msa0573540:five_prime_UTR
CCTCTGTTAACATTGATTCC+AGG 0.373957 4_1:-76758540 None:intergenic
TCACCTTCAGACCTGGAAAC+TGG 0.376898 4_1:+76762969 Msa0573540:five_prime_UTR
ATCAAACACGGCAAATGTTC+GGG 0.378987 4_1:-76759146 None:intergenic
ATTATCCTGTTTCAGATTCA+AGG 0.381663 4_1:+76767436 Msa0573540:intron
TTTGTTGAATCTGAAGCTGC+TGG 0.382487 4_1:+76758172 Msa0573540:five_prime_UTR
AAGCAGTCTGTGCTCAAGAT+AGG 0.383157 4_1:+76764603 Msa0573540:five_prime_UTR
GAGTGTAGTTGAGTTGATAA+AGG 0.384364 4_1:+76758060 Msa0573540:intron
AGACCTGGAAACTGGCTTGC+AGG 0.384413 4_1:+76762977 Msa0573540:five_prime_UTR
TTTGACTTAGAAGGCAAGTT+AGG 0.384549 4_1:+76767931 Msa0573540:three_prime_UTR
ATGGTACCATTTATGCAATA+TGG 0.389252 4_1:+76757911 Msa0573540:five_prime_UTR
GAGTATTTCTCTTGCTCAAT+GGG 0.390747 4_1:+76762816 Msa0573540:five_prime_UTR
AACAATTCCGGCTTGTCAAC+GGG 0.391308 4_1:-76757144 None:intergenic
TTTACAGGTTGATATTGCTT+TGG 0.391872 4_1:+76766353 Msa0573540:CDS
ATACCTGCAAGCCAGTTTCC+AGG 0.394718 4_1:-76762980 None:intergenic
AGCGGCTCTCATGCGTGGTT+TGG 0.396887 4_1:-76756761 None:intergenic
TACAGACTTCCTTGATGATC+AGG 0.397550 4_1:+76760067 Msa0573540:five_prime_UTR
TCTTCACCGGTTATTCATAT+GGG 0.398554 4_1:+76762769 Msa0573540:five_prime_UTR
AAGGCATGTTGTGAAGGAAT+TGG 0.398678 4_1:+76759980 Msa0573540:intron
TTATAGACCATCTGTCCTAA+TGG 0.403308 4_1:+76762872 Msa0573540:five_prime_UTR
CGTGTAAAGGAGCTTAATTA+TGG 0.404084 4_1:+76764650 Msa0573540:five_prime_UTR
GTCCTAATGGATATGCTTGC+TGG 0.407215 4_1:+76762885 Msa0573540:five_prime_UTR
CTTGCACTCGCCGTCAGAGT+CGG 0.407597 4_1:+76756784 Msa0573540:five_prime_UTR
TACCAATCAAGAGTCTATTC+TGG 0.407973 4_1:+76766759 Msa0573540:CDS
CTCCATAATGAACCTGTTGT+TGG 0.408200 4_1:+76758899 Msa0573540:five_prime_UTR
CACCGTTTGTTCGAGTGGAT+TGG 0.408963 4_1:-76767609 None:intergenic
ACTGAACTTATTCTGTCAAA+TGG 0.412439 4_1:+76760023 Msa0573540:five_prime_UTR
GGATCTCTGTGCCATTTGTT+TGG 0.413745 4_1:+76768194 Msa0573540:three_prime_UTR
CATCAAACACGGCAAATGTT+CGG 0.415336 4_1:-76759147 None:intergenic
GTAGGTGTTTCGGTATTCCT+TGG 0.418428 4_1:+76766169 Msa0573540:five_prime_UTR
GTGACTTCAAAACCAAATAT+GGG 0.421073 4_1:+76759259 Msa0573540:five_prime_UTR
TCCATAATGAACCTGTTGTT+GGG 0.422638 4_1:+76758900 Msa0573540:five_prime_UTR
CGGTTTGTAAAAGCAGTATA+GGG 0.422820 4_1:-76764629 None:intergenic
AGCGCATGAGAATGGATTGC+AGG 0.426028 4_1:+76766449 Msa0573540:CDS
CGAGTATTTCTCTTGCTCAA+TGG 0.427411 4_1:+76762815 Msa0573540:five_prime_UTR
AACTTGATCTCGCTCCAAAT+AGG 0.429517 4_1:-76758752 None:intergenic
GTAGAAGAGATTCACTTTGT+TGG 0.430584 4_1:+76765994 Msa0573540:five_prime_UTR
ATAATAGGTTCAGGAGGCTT+TGG 0.430679 4_1:-76765004 None:intergenic
GCTGAAGTCGGCACCAAGAT+TGG 0.433512 4_1:+76762915 Msa0573540:five_prime_UTR
ACGGTTTGTAAAAGCAGTAT+AGG 0.434820 4_1:-76764630 None:intergenic
GGAGGCTGCAGGATGCTCAT+TGG 0.435034 4_1:+76757658 Msa0573540:five_prime_UTR
ATCACTTTCTCGAGTCCAAT+TGG 0.436300 4_1:-76757846 None:intergenic
TGCTCATTGGACTCTGTTGA+TGG 0.437075 4_1:+76757671 Msa0573540:five_prime_UTR
AGAGTGAGAGTGAAGAAGAA+TGG 0.441914 4_1:+76756576 Msa0573540:five_prime_UTR
ATCGCCTGAGACAACAATTC+CGG 0.442458 4_1:-76757156 None:intergenic
GGTAATAAACCCTCAAGAAC+CGG 0.442867 4_1:+76766193 Msa0573540:five_prime_UTR
GATATACTCTGTAGGTGTTT+CGG 0.443859 4_1:+76766159 Msa0573540:intron
TTAAAATGCATAATAGGTTC+AGG 0.444139 4_1:-76765013 None:intergenic
AAAATTATTACTGGCTGGAC+CGG 0.447092 4_1:+76766724 Msa0573540:CDS
TCTCATATATGCACCAATCT+TGG 0.447471 4_1:-76762928 None:intergenic
TTTCATTTCAAGCTCTTAGT+GGG 0.451131 4_1:-76767971 None:intergenic
AAATGCCACGGGGAGGCTGC+AGG 0.452143 4_1:+76757647 Msa0573540:five_prime_UTR
CATGGTGGAAGCACAATGTT+TGG 0.452540 4_1:+76765808 Msa0573540:five_prime_UTR
ATCTGTAAGAAGGGGATATG+TGG 0.453887 4_1:+76768230 Msa0573540:three_prime_UTR
GTTGGAATAGGTGGAGGATC+AGG 0.461797 4_1:-76758109 None:intergenic
TCAGGAAAATTATTACTGGC+TGG 0.463767 4_1:+76766719 Msa0573540:intron
ACTTCATCATGTAGAGGAAA+AGG 0.464090 4_1:+76758505 Msa0573540:five_prime_UTR
GAGCTGTCATGGAAGAGTAC+AGG 0.466656 4_1:+76757616 Msa0573540:five_prime_UTR
GTCCCATTCTTCAGCTCCAC+AGG 0.468016 4_1:-76765845 None:intergenic
CTGAACTTATTCTGTCAAAT+GGG 0.468430 4_1:+76760024 Msa0573540:five_prime_UTR
TTGCACTCGCCGTCAGAGTC+GGG 0.469577 4_1:+76756785 Msa0573540:five_prime_UTR
TAGTATAGATTGATTTGCGC+TGG 0.470399 4_1:+76768000 Msa0573540:three_prime_UTR
GCCAGCTTGGAAGATATCTC+TGG 0.472566 4_1:-76766256 None:intergenic
ACTAGGTACTGCAATATTAA+GGG 0.473108 4_1:-76764900 None:intergenic
AGTGCCAACTGTGCAGTTGA+TGG 0.474818 4_1:-76767493 None:intergenic
TCTGCCACCGTTTGTTCGAG+TGG 0.475330 4_1:-76767614 None:intergenic
TCTTCTATTTATCTGTAAGA+AGG 0.475984 4_1:+76768220 Msa0573540:three_prime_UTR
CAACCCGTCGGCGTCGACTT+CGG 0.477435 4_1:+76756697 Msa0573540:five_prime_UTR
AAAAGGAACTCTTGAAGCCC+TGG 0.477760 4_1:+76758522 Msa0573540:five_prime_UTR
GAAAGAAAGAGGAGCTGTCA+TGG 0.477993 4_1:+76757605 Msa0573540:five_prime_UTR
AAGCCTTGTTTCCTTGAGAT+CGG 0.478729 4_1:-76756625 None:intergenic
CTCTGTTAACATTGATTCCA+GGG 0.479060 4_1:-76758539 None:intergenic
GAATTGGAATACTCAAACAT+TGG 0.479944 4_1:+76759996 Msa0573540:five_prime_UTR
TGATACTGTTTATGAGCTGT+TGG 0.485159 4_1:+76757119 Msa0573540:five_prime_UTR
CTTCTATTTATCTGTAAGAA+GGG 0.485620 4_1:+76768221 Msa0573540:three_prime_UTR
ATTAATAACAGACATTTACT+TGG 0.487157 4_1:+76767802 Msa0573540:CDS
GAGCAAAGAGCGCATGAGAA+TGG 0.488726 4_1:+76766441 Msa0573540:CDS
CCTACAAAAGGTTGATCCTC+TGG 0.489250 4_1:+76764788 Msa0573540:five_prime_UTR
GTTAAGTTTCTTGAAAGTAT+CGG 0.489598 4_1:+76757054 Msa0573540:five_prime_UTR
ACTGTGCAGTTGATGGGGTA+AGG 0.490054 4_1:-76767486 None:intergenic
CAAGCCGGAATTGTTGTCTC+AGG 0.490415 4_1:+76757152 Msa0573540:five_prime_UTR
TCACAACAGGTTATCTTCAC+CGG 0.490426 4_1:+76762756 Msa0573540:intron
TTTCCTGTGGAGCTGAAGAA+TGG 0.491550 4_1:+76765842 Msa0573540:five_prime_UTR
GCACTCTTATTATTCTGTGC+AGG 0.491564 4_1:-76768154 None:intergenic
GTTTCATTTCAAGCTCTTAG+TGG 0.491642 4_1:-76767972 None:intergenic
TTGTTGAATCTGAAGCTGCT+GGG 0.492445 4_1:+76758173 Msa0573540:five_prime_UTR
TTCCTGTGGAGCTGAAGAAT+GGG 0.492629 4_1:+76765843 Msa0573540:five_prime_UTR
CACGTGGTAGAAGAGTCTTT+TGG 0.493588 4_1:-76758943 None:intergenic
CTTCACCGGTTATTCATATG+GGG 0.493880 4_1:+76762770 Msa0573540:five_prime_UTR
GAAGCTGAACATGAGAAATA+GGG 0.494090 4_1:-76758442 None:intergenic
ATAGAAGAACACCAAACAAA+TGG 0.494621 4_1:-76768205 None:intergenic
CGGGTTGGTCAGAGAGGAGT+TGG 0.494655 4_1:-76756681 None:intergenic
AGACACAGAGTGGGAAGAGT+TGG 0.498184 4_1:+76756544 Msa0573540:five_prime_UTR
AGTCAATCTTCTTGAGGAAG+AGG 0.498368 4_1:+76759192 Msa0573540:five_prime_UTR
ATCGGAGTTGCTGCTTCTGA+TGG 0.499100 4_1:-76756607 None:intergenic
CAGGTTCTCCGTTTCAAGCA+TGG 0.503187 4_1:+76766051 Msa0573540:five_prime_UTR
ACCTGGAATGTTGGAATAGG+TGG 0.504632 4_1:-76758118 None:intergenic
TCATACACAATCCCAACAAC+AGG 0.504658 4_1:-76758911 None:intergenic
CTAAATAAGGCATGTTGTGA+AGG 0.505653 4_1:+76759974 Msa0573540:intron
TGCCAGCAAGCATATCCATT+AGG 0.506245 4_1:-76762887 None:intergenic
GAGATAAAGAATCACACTGC+TGG 0.506361 4_1:-76767848 None:intergenic
ATTAAGGGAAGTGCAATAGT+AGG 0.507692 4_1:-76764885 None:intergenic
CGAACAATACCGGTTCTTGA+GGG 0.508244 4_1:-76766202 None:intergenic
ATTCTTTGATTGTAGAGAAG+TGG 0.508477 4_1:+76765775 Msa0573540:intron
AGTTAGGTGTTAGTTGTATG+TGG 0.508600 4_1:+76767947 Msa0573540:three_prime_UTR
ACAGGATGTTTCAACCGTAC+TGG 0.509291 4_1:+76766413 Msa0573540:CDS
TGTTTCAGATTCAAGGTGAC+GGG 0.509310 4_1:+76767443 Msa0573540:intron
GTTGGTTCCCGTTGACAAGC+CGG 0.509570 4_1:+76757137 Msa0573540:five_prime_UTR
CAATGGGACCGACCATTGCT+GGG 0.510124 4_1:+76762832 Msa0573540:five_prime_UTR
TTCCAATCCACTCGAACAAA+CGG 0.510204 4_1:+76767607 Msa0573540:CDS
TATGCTGAAAGGTTACCAAT+TGG 0.511296 4_1:+76757831 Msa0573540:five_prime_UTR
ATTGGTAGCTATGTAAAATC+CGG 0.513907 4_1:-76766743 None:intergenic
ATGGAGGAGACTTGCCAGCT+TGG 0.514065 4_1:-76766269 None:intergenic
AGATGAAGGACCTACAGAAC+AGG 0.519896 4_1:+76766395 Msa0573540:CDS
TCTGTAAGAAGGGGATATGT+GGG 0.520960 4_1:+76768231 Msa0573540:three_prime_UTR
CACCAGAATAGACTCTTGAT+TGG 0.521577 4_1:-76766761 None:intergenic
AGCATATCCATTAGGACAGA+TGG 0.525339 4_1:-76762879 None:intergenic
GGCAAATGTTCGGGGCTCCA+TGG 0.525394 4_1:-76759137 None:intergenic
TACCCCATCAACTGCACAGT+TGG 0.526709 4_1:+76767489 Msa0573540:CDS
GTGCCAACTGTGCAGTTGAT+GGG 0.527009 4_1:-76767492 None:intergenic
AAACATTGTGCTTCCACCAT+GGG 0.528145 4_1:-76765806 None:intergenic
TTTGCTTATATTACATATGG+AGG 0.528215 4_1:-76766285 None:intergenic
GGTGTTTCGGTATTCCTTGG+CGG 0.529926 4_1:+76766172 Msa0573540:five_prime_UTR
AACTAAGAGCCAAAACTGCC+AGG 0.530084 4_1:-76767753 None:intergenic
TCTTTGCTCAATTTCCAGTA+CGG 0.530327 4_1:-76766427 None:intergenic
AGGTTCTCCGTTTCAAGCAT+GGG 0.531224 4_1:+76766052 Msa0573540:five_prime_UTR
CATAATTAAGCTCCTTTACA+CGG 0.532305 4_1:-76764649 None:intergenic
GAATTTAAAAGGAGAAGACT+TGG 0.533783 4_1:-76767572 None:intergenic
CATTGGACTCTGTTGATGGA+AGG 0.534418 4_1:+76757675 Msa0573540:five_prime_UTR
GTGCTCTTGATTCTTGATGC+GGG 0.534686 4_1:+76768173 Msa0573540:three_prime_UTR
CAACAATTCCGGCTTGTCAA+CGG 0.535577 4_1:-76757145 None:intergenic
TCACCTGCCCATGCTTGAAA+CGG 0.535705 4_1:-76766059 None:intergenic
TCTCCGTTTCAAGCATGGGC+AGG 0.535920 4_1:+76766056 Msa0573540:five_prime_UTR
GGTACAGATATGCTTTCCTG+TGG 0.536610 4_1:+76765829 Msa0573540:five_prime_UTR
GGTCATCATGTGATGGAACC+TGG 0.536900 4_1:-76758135 None:intergenic
GGAACCTGGAATGTTGGAAT+AGG 0.537128 4_1:-76758121 None:intergenic
TTTAGCTGGAATTGCTGGCC+TGG 0.538396 4_1:+76767735 Msa0573540:CDS
TCTGTTGATGGAAGGTTCAA+AGG 0.539469 4_1:+76757683 Msa0573540:five_prime_UTR
TCAAGAACCGGTATTGTTCG+TGG 0.539580 4_1:+76766205 Msa0573540:five_prime_UTR
AGAGTCTATTCTGGTGATGT+TGG 0.539916 4_1:+76766768 Msa0573540:CDS
TCGAGTATCGAAAGATGACT+TGG 0.542562 4_1:+76757581 Msa0573540:five_prime_UTR
CGAAGTCGACGCCGACGGGT+TGG 0.542868 4_1:-76756696 None:intergenic
AGCAGTCTGTGCTCAAGATA+GGG 0.543777 4_1:+76764604 Msa0573540:five_prime_UTR
GTGCTTCCACCATGGGACTT+CGG 0.546255 4_1:-76765799 None:intergenic
TAAGAAAGTCAATCTTCTTG+AGG 0.547713 4_1:+76759186 Msa0573540:five_prime_UTR
ACGAACAATACCGGTTCTTG+AGG 0.548426 4_1:-76766203 None:intergenic
TATGTCTCCACGAACAATAC+CGG 0.550388 4_1:-76766212 None:intergenic
TGACTGTTCACCTTCAGACC+TGG 0.550400 4_1:+76762962 Msa0573540:five_prime_UTR
AGCTGTCATGGAAGAGTACA+GGG 0.550451 4_1:+76757617 Msa0573540:five_prime_UTR
ATCTCTGGTTTAATGCATAG+AGG 0.550760 4_1:-76758390 None:intergenic
AGAGGGTAAAATTTCTTCGT+GGG 0.551146 4_1:+76759210 Msa0573540:five_prime_UTR
AAGCAGCAACTCCGATCTCA+AGG 0.551701 4_1:+76756614 Msa0573540:five_prime_UTR
AAATACTAACCCGACTCTGA+CGG 0.552340 4_1:-76756794 None:intergenic
TAATATTGGTCTTTACTGGA+CGG 0.553231 4_1:-76758480 None:intergenic
GTGCCGAAGTCGACGCCGAC+GGG 0.554379 4_1:-76756700 None:intergenic
ATAGGTGGAGGATCAGGTGC+TGG 0.554537 4_1:-76758103 None:intergenic
CCTCACGGTCTCAGGAGAAA+CGG 0.555379 4_1:-76757874 None:intergenic
TGGAAACAAGTTTCAATGAT+CGG 0.560280 4_1:-76756648 None:intergenic
TGTCAAAATAGTGATGCAAA+TGG 0.560872 4_1:+76764574 Msa0573540:five_prime_UTR
TGTGATGGAACCTGGAATGT+TGG 0.561702 4_1:-76758127 None:intergenic
TTGGACTCGAGAAAGTGATT+CGG 0.562710 4_1:+76757850 Msa0573540:five_prime_UTR
TCCAGAGATATCTTCCAAGC+TGG 0.564354 4_1:+76766255 Msa0573540:five_prime_UTR
GAATCAAAACCTGATCATCA+AGG 0.564712 4_1:-76760076 None:intergenic
TTCTATTTATCTGTAAGAAG+GGG 0.569221 4_1:+76768222 Msa0573540:three_prime_UTR
AAGAGGGTAAAATTTCTTCG+TGG 0.569335 4_1:+76759209 Msa0573540:five_prime_UTR
CAAACATTGTGCTTCCACCA+TGG 0.569894 4_1:-76765807 None:intergenic
TGTTGAATCTGAAGCTGCTG+GGG 0.571772 4_1:+76758174 Msa0573540:five_prime_UTR
TTGAGGGTTTATTACCGCCA+AGG 0.572207 4_1:-76766186 None:intergenic
ATTGGTTGCAGTATGCTGAA+AGG 0.572229 4_1:+76757820 Msa0573540:intron
CTCAGATATATCAGCATCAG+AGG 0.572948 4_1:+76759063 Msa0573540:intron
AAGCCAGTTTCCAGGTCTGA+AGG 0.573250 4_1:-76762972 None:intergenic
AATAGGGTGGATCCTTCCTA+CGG 0.573344 4_1:-76758426 None:intergenic
CTGTTTCAGATTCAAGGTGA+CGG 0.573723 4_1:+76767442 Msa0573540:intron
AAACGGTGGCAGAGAAGCAA+AGG 0.577125 4_1:+76767624 Msa0573540:CDS
GAGGAGTTGGTTCATGTCGG+TGG 0.577148 4_1:-76756668 None:intergenic
ATGTTGCGTCTTCAAGATGA+AGG 0.577278 4_1:+76766381 Msa0573540:CDS
GATGACTTGGAGAAAGAAAG+AGG 0.577729 4_1:+76757594 Msa0573540:five_prime_UTR
GAGTGGGAAGAGTTGGACTC+TGG 0.579514 4_1:+76756551 Msa0573540:five_prime_UTR
TGGAATGTTGGAATAGGTGG+AGG 0.579922 4_1:-76758115 None:intergenic
CACGGACTATAGATACTTCA+CGG 0.580769 4_1:-76758702 None:intergenic
AGTGCCGAAGTCGACGCCGA+CGG 0.584965 4_1:-76756701 None:intergenic
TGCAGCGAACGTAGTAGCGA+AGG 0.586529 4_1:-76756735 None:intergenic
TTATTCTGTCAAATGGGATG+CGG 0.588007 4_1:+76760030 Msa0573540:five_prime_UTR
ATATTCATCTCTCAAGCTCG+TGG 0.588260 4_1:-76758779 None:intergenic
AATATGGCTGTCATAGCAGT+TGG 0.589918 4_1:+76757927 Msa0573540:five_prime_UTR
AGTGCTCTTGATTCTTGATG+CGG 0.591545 4_1:+76768172 Msa0573540:three_prime_UTR
TTCACCGGTTATTCATATGG+GGG 0.591878 4_1:+76762771 Msa0573540:five_prime_UTR
CACACCAATTTCCCCAGCAA+TGG 0.592509 4_1:-76762844 None:intergenic
ACTCCGATCTCAAGGAAACA+AGG 0.593051 4_1:+76756622 Msa0573540:five_prime_UTR
GTTGAAACATCCTGTTCTGT+AGG 0.595111 4_1:-76766405 None:intergenic
TTCCATCACATGATGACCCA+CGG 0.596134 4_1:+76758140 Msa0573540:five_prime_UTR
CAGGGGAAGCAGAAATGCCA+CGG 0.596363 4_1:+76757635 Msa0573540:five_prime_UTR
GTCAATCTTCTTGAGGAAGA+GGG 0.598448 4_1:+76759193 Msa0573540:five_prime_UTR
AACAAATTTAACCCCAGATG+AGG 0.599504 4_1:+76764547 Msa0573540:five_prime_UTR
AGGGGAAGCAGAAATGCCAC+GGG 0.599954 4_1:+76757636 Msa0573540:five_prime_UTR
CTGTGCAGTTGATGGGGTAA+GGG 0.600354 4_1:-76767485 None:intergenic
AACCGTGGGTCATCATGTGA+TGG 0.600868 4_1:-76758142 None:intergenic
AATTTAAAAGGAGAAGACTT+GGG 0.602381 4_1:-76767571 None:intergenic
GACTTCGGCACTCTCGATAA+CGG 0.603537 4_1:+76756712 Msa0573540:five_prime_UTR
GAAGCAGAAATGCCACGGGG+AGG 0.604701 4_1:+76757640 Msa0573540:five_prime_UTR
TGCACTGATGTACCTATGGA+TGG 0.609699 4_1:-76765077 None:intergenic
AGAAGTGGTCCGAAGTCCCA+TGG 0.610961 4_1:+76765790 Msa0573540:five_prime_UTR
CGCCGACGGGTTGGTCAGAG+AGG 0.612082 4_1:-76756687 None:intergenic
ATAGGGTGGATCCTTCCTAC+GGG 0.612230 4_1:-76758425 None:intergenic
ATCACAACAGTAAAAGCTGA+AGG 0.613555 4_1:-76764846 None:intergenic
ATTATAACTTCATCATGTAG+AGG 0.615662 4_1:+76758499 Msa0573540:five_prime_UTR
ATGTACCTATGGATGGCTGT+TGG 0.616981 4_1:-76765070 None:intergenic
AGAGAGGAGTTGGTTCATGT+CGG 0.618402 4_1:-76756671 None:intergenic
GCAAGAGCGGCTCTCATGCG+TGG 0.619075 4_1:-76756766 None:intergenic
AATCAACTGGAAAATGGATG+CGG 0.624557 4_1:+76768062 Msa0573540:three_prime_UTR
TTTAGCAGAATTCAGTTCGG+AGG 0.625569 4_1:+76757185 Msa0573540:five_prime_UTR
TTCAGATTCAAGGTGACGGG+CGG 0.627609 4_1:+76767446 Msa0573540:intron
TCTGACGGCGAGTGCAAGAG+CGG 0.629378 4_1:-76756779 None:intergenic
AAATGCATAATAGGTTCAGG+AGG 0.633643 4_1:-76765010 None:intergenic
TTTAACCGTGATGATCTGAA+AGG 0.633770 4_1:+76765031 Msa0573540:five_prime_UTR
TTCATTTCAAGCTCTTAGTG+GGG 0.637734 4_1:-76767970 None:intergenic
TCTCTGACATCAGCAGCGCA+CGG 0.638213 4_1:-76758720 None:intergenic
ATGCACCAGATATACTCTGT+AGG 0.640563 4_1:+76766151 Msa0573540:intron
TAGCTGTGTCATAAAGACCA+TGG 0.640875 4_1:+76759120 Msa0573540:five_prime_UTR
TGACTTCAAAACCAAATATG+GGG 0.645184 4_1:+76759260 Msa0573540:five_prime_UTR
CCAATTTCCCCAGCAATGGT+CGG 0.646717 4_1:-76762840 None:intergenic
GCTGAACATGAGAAATAGGG+TGG 0.647160 4_1:-76758439 None:intergenic
CAACAAAACAAGAAAACCGT+GGG 0.648380 4_1:-76758156 None:intergenic
TGCCAACTGTGCAGTTGATG+GGG 0.648693 4_1:-76767491 None:intergenic
GTTTAATGCATAGAGGAACA+TGG 0.657057 4_1:-76758383 None:intergenic
AGCATCCTGCAGCCTCCCCG+TGG 0.657528 4_1:-76757652 None:intergenic
CTTGAAGAAGAAGATGAACG+TGG 0.660905 4_1:+76756967 Msa0573540:five_prime_UTR
AATGGGACCGACCATTGCTG+GGG 0.662960 4_1:+76762833 Msa0573540:five_prime_UTR
TTGTGGAGACATTCACGCAG+TGG 0.666494 4_1:+76767775 Msa0573540:CDS
TCAAACACGGCAAATGTTCG+GGG 0.671594 4_1:-76759145 None:intergenic
GCTGGCAAGAGAGCTGAAGT+CGG 0.672922 4_1:+76762903 Msa0573540:five_prime_UTR
GCAGTCCTTTCAGATCATCA+CGG 0.676757 4_1:-76765036 None:intergenic
ATGGCTGTTGGAAAAGTGAA+AGG 0.681632 4_1:-76765058 None:intergenic
GGAGCTGAAGAATGGGACCA+TGG 0.686960 4_1:+76765850 Msa0573540:five_prime_UTR
TCAACAAAACAAGAAAACCG+TGG 0.688709 4_1:-76758157 None:intergenic
AGTGGTCCGAAGTCCCATGG+TGG 0.688790 4_1:+76765793 Msa0573540:five_prime_UTR
CTCCTCTCTGACCAACCCGT+CGG 0.695070 4_1:+76756685 Msa0573540:five_prime_UTR
AAGTATTCACAAGCTTCCAG+AGG 0.701309 4_1:-76764804 None:intergenic
CCTGGAATCAATGTTAACAG+AGG 0.702536 4_1:+76758540 Msa0573540:five_prime_UTR
CCGTTTCTCCTGAGACCGTG+AGG 0.706500 4_1:+76757874 Msa0573540:five_prime_UTR
GCTGTCATGGAAGAGTACAG+GGG 0.722316 4_1:+76757618 Msa0573540:five_prime_UTR
CAATCCACTCGAACAAACGG+TGG 0.722672 4_1:+76767610 Msa0573540:CDS
GGGGAAGCAGAAATGCCACG+GGG 0.778748 4_1:+76757637 Msa0573540:five_prime_UTR
CTTGGGCATAAGTATCACTG+CGG 0.799446 4_1:-76767554 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAACTTTTTTATTTGAT+TGG + chr4_1:76760346-76760365 Msa0573540:intron 10.0%
!!! CGTAATTTTTTATTTTATTT+TGG + chr4_1:76760489-76760508 Msa0573540:intron 10.0%
!! TTTATTATAAGTTTATAACT+CGG - chr4_1:76760628-76760647 None:intergenic 10.0%
!! GATATAAAATTAGAATTTAA+GGG - chr4_1:76765328-76765347 None:intergenic 10.0%
!! TGATATAAAATTAGAATTTA+AGG - chr4_1:76765329-76765348 None:intergenic 10.0%
!!! ATTTTATATCAACATATTTA+TGG + chr4_1:76765338-76765357 Msa0573540:intron 10.0%
!!! TTTTATATCAACATATTTAT+GGG + chr4_1:76765339-76765358 Msa0573540:intron 10.0%
!! AAGTTAAACTATATTCATAT+AGG - chr4_1:76757374-76757393 None:intergenic 15.0%
!! AAAAAGAACATAACATAATT+TGG - chr4_1:76757476-76757495 None:intergenic 15.0%
!!! AAATTATGTTATGTTCTTTT+TGG + chr4_1:76757475-76757494 Msa0573540:intron 15.0%
!!! ATTTAAGACAGTTATATTTT+AGG + chr4_1:76758648-76758667 Msa0573540:intron 15.0%
!!! TTTCTTTGTTTACATTAAAA+TGG + chr4_1:76758818-76758837 Msa0573540:intron 15.0%
!! ATATATCAGTTATTAAACTA+TGG + chr4_1:76759876-76759895 Msa0573540:intron 15.0%
!! TATATCAGTTATTAAACTAT+GGG + chr4_1:76759877-76759896 Msa0573540:intron 15.0%
!!! TAAAAAGTTTGTGTTTTTTT+CGG - chr4_1:76760331-76760350 None:intergenic 15.0%
!! ATAAATTCATTATTCGAATT+TGG - chr4_1:76760407-76760426 None:intergenic 15.0%
!!! AAGTTTTTATTTTTGAATCA+AGG - chr4_1:76760673-76760692 None:intergenic 15.0%
!! ATACACAAACATTTATTATT+GGG + chr4_1:76762626-76762645 Msa0573540:intron 15.0%
!! TTAGTTGTATAATTTAACAA+TGG - chr4_1:76763105-76763124 None:intergenic 15.0%
!!! AATTGTTTATGTTTTAAAGT+AGG + chr4_1:76763123-76763142 Msa0573540:intron 15.0%
!! CTTAATGAGATAAATAATTT+AGG + chr4_1:76765467-76765486 Msa0573540:intron 15.0%
!! ATCAAAGAATATTGTTTATT+TGG - chr4_1:76765765-76765784 None:intergenic 15.0%
!!! AACAGTATGTATAAAATTTT+AGG + chr4_1:76768382-76768401 Msa0573540:three_prime_UTR 15.0%
!! ACATGATGAAGTTATAATAT+TGG - chr4_1:76758497-76758516 None:intergenic 20.0%
!! AAAAAGAGAAGAAAAAAATG+AGG - chr4_1:76758590-76758609 None:intergenic 20.0%
!! CTTAAATCTTGAAAGAAAAA+AGG - chr4_1:76758635-76758654 None:intergenic 20.0%
!!! CTAAATATTCTGAGAAATTA+CGG + chr4_1:76759089-76759108 Msa0573540:five_prime_UTR 20.0%
!!! ATTTTTTAGATCATCAAACA+CGG - chr4_1:76759161-76759180 None:intergenic 20.0%
!! TATATTCATGTAATCATTGT+TGG + chr4_1:76759498-76759517 Msa0573540:intron 20.0%
!! AATTCATGTAGTGAAAATAA+AGG + chr4_1:76759682-76759701 Msa0573540:intron 20.0%
!!! TGGATTTTATATGTAATGAA+TGG + chr4_1:76759849-76759868 Msa0573540:intron 20.0%
!! TGGAAGAAAATTATCTAATT+AGG - chr4_1:76759911-76759930 None:intergenic 20.0%
!!! AATTTTTAACTTGAAACCAA+AGG - chr4_1:76760377-76760396 None:intergenic 20.0%
!!! CAAAAAATGTTGAATTTTGT+AGG - chr4_1:76760461-76760480 None:intergenic 20.0%
!! TTCTTTATCATACAAAAGTT+GGG - chr4_1:76762076-76762095 None:intergenic 20.0%
!! TCAATATATTTCAGTAACTT+TGG - chr4_1:76762461-76762480 None:intergenic 20.0%
!! GAAACAGAAAACTTAATTTA+TGG - chr4_1:76762581-76762600 None:intergenic 20.0%
!! CATACACAAACATTTATTAT+TGG + chr4_1:76762625-76762644 Msa0573540:intron 20.0%
!!! TTTTAACACCACAAAAATAA+TGG - chr4_1:76762698-76762717 None:intergenic 20.0%
!!! TTTTTGTGGTGTTAAAATTA+TGG + chr4_1:76762701-76762720 Msa0573540:intron 20.0%
!! GAAAAAGGAGAAATATTATA+AGG - chr4_1:76763222-76763241 None:intergenic 20.0%
!! TAAAACATTCATGAAGAAAA+AGG - chr4_1:76763237-76763256 None:intergenic 20.0%
!! CCTTATAACTTAAATATAGA+TGG - chr4_1:76763290-76763309 None:intergenic 20.0%
!!! CCATCTATATTTAAGTTATA+AGG + chr4_1:76763287-76763306 Msa0573540:intron 20.0%
!! ATATTAATATAGTCAACAGT+AGG + chr4_1:76763580-76763599 Msa0573540:intron 20.0%
!!! ATATGTTTGTGTTTTAAAGT+AGG + chr4_1:76763620-76763639 Msa0573540:intron 20.0%
!!! AGCAAGTATTTTTTATCTTT+AGG + chr4_1:76763644-76763663 Msa0573540:intron 20.0%
!! AAAGAAAAAGGAGAAATATA+CGG - chr4_1:76763720-76763739 None:intergenic 20.0%
!! GTAATCAAAATATACTTCTT+CGG - chr4_1:76764183-76764202 None:intergenic 20.0%
!!! TTACAAGTTTTATATCTTGT+TGG + chr4_1:76764387-76764406 Msa0573540:intron 20.0%
!! ATGTTATACCCTAAAAAAAT+AGG - chr4_1:76764681-76764700 None:intergenic 20.0%
!! AATTGGTATAGAATTATTCA+AGG - chr4_1:76764958-76764977 None:intergenic 20.0%
!!! AAAGATGTGAAATTTTTGTT+AGG + chr4_1:76765162-76765181 Msa0573540:intron 20.0%
!!! AATAGGCTATTTATGTTTTT+TGG + chr4_1:76765191-76765210 Msa0573540:intron 20.0%
!!! AAATTAGAATTTAAGGGTTT+TGG - chr4_1:76765322-76765341 None:intergenic 20.0%
!!! CAAATTTTTGTATAATTCCA+TGG - chr4_1:76765907-76765926 None:intergenic 20.0%
!! AATTAATGTACCATATAAGA+AGG - chr4_1:76766115-76766134 None:intergenic 20.0%
!!! AAGTTTGCTTATATTACATA+TGG - chr4_1:76766291-76766310 None:intergenic 20.0%
!!! AAACTTTTTATGCTGTTATA+TGG + chr4_1:76766305-76766324 Msa0573540:exon 20.0%
!! AATGTAATAGATATATACAC+CGG + chr4_1:76766526-76766545 Msa0573540:intron 20.0%
!! TATTAAAAGAAGTTTATGTC+TGG - chr4_1:76767302-76767321 None:intergenic 20.0%
!! GTAAATGTCTGTTATTAATA+TGG - chr4_1:76767801-76767820 None:intergenic 20.0%
!! ATTAATAACAGACATTTACT+TGG + chr4_1:76767802-76767821 Msa0573540:CDS 20.0%
!! TTTCAAAACAAAAAACAAAG+TGG - chr4_1:76768340-76768359 None:intergenic 20.0%
!! GTTAAGTTTCTTGAAAGTAT+CGG + chr4_1:76757054-76757073 Msa0573540:five_prime_UTR 25.0%
! ACTTATAGATATGTCATAAC+CGG - chr4_1:76757295-76757314 None:intergenic 25.0%
! GTTATGACATATCTATAAGT+TGG + chr4_1:76757295-76757314 Msa0573540:intron 25.0%
! TTAGTCATGTTAAGATAAGA+TGG + chr4_1:76757731-76757750 Msa0573540:intron 25.0%
!!! AAGATAAGATGGTTTTGTAT+TGG + chr4_1:76757742-76757761 Msa0573540:intron 25.0%
!!! GTGATTTTTGGGAATTATAT+GGG + chr4_1:76757778-76757797 Msa0573540:intron 25.0%
!! TGATGCATAAAGTGTTTAAT+TGG + chr4_1:76757802-76757821 Msa0573540:intron 25.0%
!! CTTATCTTCTTTTTATGCTA+TGG + chr4_1:76757982-76758001 Msa0573540:intron 25.0%
!! AGTAACGAATCATTAACTTT+TGG + chr4_1:76758203-76758222 Msa0573540:intron 25.0%
!! ATTAACTTTTGGCAATTTTC+CGG + chr4_1:76758214-76758233 Msa0573540:intron 25.0%
! TGGAAACTAACATATTACTT+TGG + chr4_1:76758265-76758284 Msa0573540:intron 25.0%
! GGAAACTAACATATTACTTT+GGG + chr4_1:76758266-76758285 Msa0573540:intron 25.0%
!!! GGGATATTTTAAAAAATCTC+TGG - chr4_1:76758408-76758427 None:intergenic 25.0%
!!! GATTTTTTAAAATATCCCGT+AGG + chr4_1:76758410-76758429 Msa0573540:five_prime_UTR 25.0%
!!! GTTATAATATTGGTCTTTAC+TGG - chr4_1:76758487-76758506 None:intergenic 25.0%
! ATTATAACTTCATCATGTAG+AGG + chr4_1:76758499-76758518 Msa0573540:five_prime_UTR 25.0%
! TTGAAAGAAAAAAGGAGAAA+AGG - chr4_1:76758627-76758646 None:intergenic 25.0%
!!! AGTTATATTTTAGGTTGCTA+GGG + chr4_1:76758657-76758676 Msa0573540:intron 25.0%
!! TAACAAACTGTGCATTATTT+TGG + chr4_1:76758845-76758864 Msa0573540:intron 25.0%
!!! TAGTTCTGATATCAAATTTC+TGG + chr4_1:76758996-76759015 Msa0573540:intron 25.0%
!! ACTATGGATGATTTTATATG+AGG - chr4_1:76759462-76759481 None:intergenic 25.0%
! TTACATGAATATAAGCATGT+GGG - chr4_1:76759491-76759510 None:intergenic 25.0%
! ATTACATGAATATAAGCATG+TGG - chr4_1:76759492-76759511 None:intergenic 25.0%
! TGATAAGCATAAAACTTTAG+TGG + chr4_1:76759632-76759651 Msa0573540:intron 25.0%
! ATAAAGGAAATTTCCTTACT+TGG + chr4_1:76759698-76759717 Msa0573540:intron 25.0%
!! ATAAACAATTGGTTCCTATA+GGG - chr4_1:76759728-76759747 None:intergenic 25.0%
!! TAGCTAAAAGCATAAACAAT+TGG - chr4_1:76759739-76759758 None:intergenic 25.0%
!! TTTTCATTTACTTTGCCATT+AGG + chr4_1:76759759-76759778 Msa0573540:intron 25.0%
! GAATGTTAATACCTAAACAT+AGG - chr4_1:76759940-76759959 None:intergenic 25.0%
!!! ACTCTCATTTTTCCTAAATA+AGG + chr4_1:76759961-76759980 Msa0573540:intron 25.0%
! AAAGAAATTGGTCAATGTTT+GGG - chr4_1:76760142-76760161 None:intergenic 25.0%
! TAAAGAAATTGGTCAATGTT+TGG - chr4_1:76760143-76760162 None:intergenic 25.0%
! AACCAGATTGATAAAGAAAT+TGG - chr4_1:76760154-76760173 None:intergenic 25.0%
!!! ACTTTTTTATTTGATTGGCT+TGG + chr4_1:76760351-76760370 Msa0573540:intron 25.0%
! TTGCAATGAAAAACTAATCT+GGG - chr4_1:76760526-76760545 None:intergenic 25.0%
! ATTGCAATGAAAAACTAATC+TGG - chr4_1:76760527-76760546 None:intergenic 25.0%
!!! AACCTATCTTCTATTAGTTT+TGG - chr4_1:76760839-76760858 None:intergenic 25.0%
!!! AGGGTTTTAAAGAAAACTTA+GGG - chr4_1:76762026-76762045 None:intergenic 25.0%
!!! TAGGGTTTTAAAGAAAACTT+AGG - chr4_1:76762027-76762046 None:intergenic 25.0%
! TCTTTATCATACAAAAGTTG+GGG - chr4_1:76762075-76762094 None:intergenic 25.0%
! CTTCTTTATCATACAAAAGT+TGG - chr4_1:76762077-76762096 None:intergenic 25.0%
! GTCATTGTAGTATAATAAAC+TGG + chr4_1:76762506-76762525 Msa0573540:intron 25.0%
!! GCATATATGAGAACTTTTTA+TGG + chr4_1:76762939-76762958 Msa0573540:five_prime_UTR 25.0%
!! TCATGTATGTAACATCTTTT+TGG - chr4_1:76763433-76763452 None:intergenic 25.0%
! GAAAATACTCACAAAGAAAA+AGG - chr4_1:76763732-76763751 None:intergenic 25.0%
! GATTAATATGTAACTAATGC+AGG - chr4_1:76764299-76764318 None:intergenic 25.0%
!! ATTTTTCACAAAGATTCATG+TGG + chr4_1:76764410-76764429 Msa0573540:intron 25.0%
!!! ATGGAAACTCCTATTTTTTT+AGG + chr4_1:76764669-76764688 Msa0573540:five_prime_UTR 25.0%
!!! TGGAAACTCCTATTTTTTTA+GGG + chr4_1:76764670-76764689 Msa0573540:five_prime_UTR 25.0%
!!! TTTAGGGTATAACATTTTTC+TGG + chr4_1:76764686-76764705 Msa0573540:intron 25.0%
!!! TGTAGGTCACATTTTTTAAT+CGG - chr4_1:76764774-76764793 None:intergenic 25.0%
! TAAAAAATGTGACCTACAAA+AGG + chr4_1:76764776-76764795 Msa0573540:five_prime_UTR 25.0%
! TTAAAATGCATAATAGGTTC+AGG - chr4_1:76765016-76765035 None:intergenic 25.0%
!! TTTTTGTTAGGTTCTCAAAT+AGG + chr4_1:76765174-76765193 Msa0573540:intron 25.0%
!! GAAAAATAGATGGATTTGAT+TGG - chr4_1:76765256-76765275 None:intergenic 25.0%
! TGCATAACTTGAAAAATAGA+TGG - chr4_1:76765266-76765285 None:intergenic 25.0%
!!! GTTGGTGATAAAAAAATTGA+CGG - chr4_1:76765300-76765319 None:intergenic 25.0%
! TTATGGGTTTACAATGAATT+TGG + chr4_1:76765355-76765374 Msa0573540:intron 25.0%
! TATGGGTTTACAATGAATTT+GGG + chr4_1:76765356-76765375 Msa0573540:intron 25.0%
!! TTTACAATGAATTTGGGATA+TGG + chr4_1:76765362-76765381 Msa0573540:intron 25.0%
!!! TTTGGGATATGGAATAATTT+TGG + chr4_1:76765373-76765392 Msa0573540:intron 25.0%
! ATTATACAGAACATTAGAGT+AGG + chr4_1:76765443-76765462 Msa0573540:intron 25.0%
! TTATACAGAACATTAGAGTA+GGG + chr4_1:76765444-76765463 Msa0573540:intron 25.0%
!!! CAAATTTTAGAGTTCTAAGT+AGG + chr4_1:76765578-76765597 Msa0573540:intron 25.0%
!!! ATTGCATCTTTTTGATAATC+TGG + chr4_1:76765661-76765680 Msa0573540:intron 25.0%
!! GAGCATATTTCTATATTATG+AGG + chr4_1:76765691-76765710 Msa0573540:intron 25.0%
! TATATGGTACATTAATTCTG+AGG + chr4_1:76766118-76766137 Msa0573540:intron 25.0%
! TTTGCTTATATTACATATGG+AGG - chr4_1:76766288-76766307 None:intergenic 25.0%
!!! TTATTTTTACATGCTCTTTC+AGG + chr4_1:76766701-76766720 Msa0573540:intron 25.0%
! TCTTTCAGGAAAATTATTAC+TGG + chr4_1:76766715-76766734 Msa0573540:intron 25.0%
! TCATTTCAAAACTAAAGCAA+TGG - chr4_1:76766942-76766961 None:intergenic 25.0%
!!! AAAAAAGGTACTAGAATCTA+AGG - chr4_1:76767171-76767190 None:intergenic 25.0%
! AACTTCTCATTTATACGAAA+AGG - chr4_1:76767404-76767423 None:intergenic 25.0%
!!! TACTGTTTTTTACAAGGATA+AGG - chr4_1:76767532-76767551 None:intergenic 25.0%
! AATTTAAAAGGAGAAGACTT+GGG - chr4_1:76767574-76767593 None:intergenic 25.0%
!! ACTGATTTCAGGAATTTAAA+AGG - chr4_1:76767586-76767605 None:intergenic 25.0%
! TTACAAAATCAACTGGAAAA+TGG + chr4_1:76768056-76768075 Msa0573540:three_prime_UTR 25.0%
! TACAATATTGTATTTGAGTC+TGG + chr4_1:76768085-76768104 Msa0573540:three_prime_UTR 25.0%
! TGTTTACCAAAACTACTAAT+TGG - chr4_1:76768129-76768148 None:intergenic 25.0%
! TCTTCTATTTATCTGTAAGA+AGG + chr4_1:76768220-76768239 Msa0573540:three_prime_UTR 25.0%
! CTTCTATTTATCTGTAAGAA+GGG + chr4_1:76768221-76768240 Msa0573540:three_prime_UTR 25.0%
! TTCTATTTATCTGTAAGAAG+GGG + chr4_1:76768222-76768241 Msa0573540:three_prime_UTR 25.0%
!!! AAAACAGAATGCTTTTTTGA+AGG - chr4_1:76768287-76768306 None:intergenic 25.0%
TGGAAACAAGTTTCAATGAT+CGG - chr4_1:76756651-76756670 None:intergenic 30.0%
GCAATCAATAATTTCGATTG+AGG - chr4_1:76756923-76756942 None:intergenic 30.0%
TTCAAAGAGCTTATGAATAC+CGG + chr4_1:76757273-76757292 Msa0573540:intron 30.0%
! TAGCAGAAAGAATTGGTTTA+AGG - chr4_1:76757711-76757730 None:intergenic 30.0%
TGACTAATAGCAGAAAGAAT+TGG - chr4_1:76757718-76757737 None:intergenic 30.0%
!!! ATAAGATGGTTTTGTATTGG+AGG + chr4_1:76757745-76757764 Msa0573540:intron 30.0%
!! GGTGATTTTTGGGAATTATA+TGG + chr4_1:76757777-76757796 Msa0573540:intron 30.0%
TTTCTTGTAAAAATGCCTCA+CGG - chr4_1:76757892-76757911 None:intergenic 30.0%
!! TGAGGCATTTTTACAAGAAA+TGG + chr4_1:76757892-76757911 Msa0573540:five_prime_UTR 30.0%
ATGGTACCATTTATGCAATA+TGG + chr4_1:76757911-76757930 Msa0573540:five_prime_UTR 30.0%
!! TACACTCTGAAATTGTACAA+GGG - chr4_1:76758047-76758066 None:intergenic 30.0%
!!! GAGTTGATAAAGGTTCATTT+TGG + chr4_1:76758070-76758089 Msa0573540:five_prime_UTR 30.0%
! TTAACTTTTGGCAATTTTCC+GGG + chr4_1:76758215-76758234 Msa0573540:intron 30.0%
!!! TTTTAAAATATCCCGTAGGA+AGG + chr4_1:76758414-76758433 Msa0573540:five_prime_UTR 30.0%
!! TAATATTGGTCTTTACTGGA+CGG - chr4_1:76758483-76758502 None:intergenic 30.0%
!!! CAGTTATATTTTAGGTTGCT+AGG + chr4_1:76758656-76758675 Msa0573540:intron 30.0%
TAAGAAAGTCAATCTTCTTG+AGG + chr4_1:76759186-76759205 Msa0573540:five_prime_UTR 30.0%
TCACAATTTCTTCAGGAATA+TGG - chr4_1:76759243-76759262 None:intergenic 30.0%
! TTTGAAGTCACAATTTCTTC+AGG - chr4_1:76759250-76759269 None:intergenic 30.0%
TGTGACTTCAAAACCAAATA+TGG + chr4_1:76759258-76759277 Msa0573540:five_prime_UTR 30.0%
GTGACTTCAAAACCAAATAT+GGG + chr4_1:76759259-76759278 Msa0573540:five_prime_UTR 30.0%
TGACTTCAAAACCAAATATG+GGG + chr4_1:76759260-76759279 Msa0573540:five_prime_UTR 30.0%
GTAATGTACAAGATAGAGAA+AGG - chr4_1:76759304-76759323 None:intergenic 30.0%
TTTACTCTCTGATTCTGATA+TGG + chr4_1:76759347-76759366 Msa0573540:intron 30.0%
TTACTCTCTGATTCTGATAT+GGG + chr4_1:76759348-76759367 Msa0573540:intron 30.0%
GTGATATACAAGATAGAGAA+AGG - chr4_1:76759393-76759412 None:intergenic 30.0%
CACTATTAAAATGACCTCAT+GGG - chr4_1:76759614-76759633 None:intergenic 30.0%
TCACTATTAAAATGACCTCA+TGG - chr4_1:76759615-76759634 None:intergenic 30.0%
! CATAAACAATTGGTTCCTAT+AGG - chr4_1:76759729-76759748 None:intergenic 30.0%
TTTAATGAAACACAGCCTAA+TGG - chr4_1:76759777-76759796 None:intergenic 30.0%
GTTTATATGTTTAAGCAGCT+TGG + chr4_1:76759829-76759848 Msa0573540:intron 30.0%
TTCCAGTAAAACCTATGTTT+AGG + chr4_1:76759926-76759945 Msa0573540:intron 30.0%
! TACCTAAACATAGGTTTTAC+TGG - chr4_1:76759931-76759950 None:intergenic 30.0%
GAATTGGAATACTCAAACAT+TGG + chr4_1:76759996-76760015 Msa0573540:five_prime_UTR 30.0%
ACTGAACTTATTCTGTCAAA+TGG + chr4_1:76760023-76760042 Msa0573540:five_prime_UTR 30.0%
CTGAACTTATTCTGTCAAAT+GGG + chr4_1:76760024-76760043 Msa0573540:five_prime_UTR 30.0%
GACCAATTTCTTTATCAATC+TGG + chr4_1:76760149-76760168 Msa0573540:intron 30.0%
TCAAATTAGAACTTAAACCC+AGG + chr4_1:76760258-76760277 Msa0573540:intron 30.0%
CAAATTAGAACTTAAACCCA+GGG + chr4_1:76760259-76760278 Msa0573540:intron 30.0%
AAATTAGAACTTAAACCCAG+GGG + chr4_1:76760260-76760279 Msa0573540:intron 30.0%
TTCATAAACCAATCCAACTT+GGG + chr4_1:76760285-76760304 Msa0573540:intron 30.0%
!!! AGTTTGTGTTTTTTTCGGTT+TGG - chr4_1:76760326-76760345 None:intergenic 30.0%
AAATGATATGTCATCCACAT+AGG - chr4_1:76760581-76760600 None:intergenic 30.0%
TGACATATCATTTGACACAT+AGG + chr4_1:76760588-76760607 Msa0573540:intron 30.0%
CACCAAAACTAATAGAAGAT+AGG + chr4_1:76760834-76760853 Msa0573540:intron 30.0%
ACTAATAGAAGATAGGTTAC+AGG + chr4_1:76760841-76760860 Msa0573540:intron 30.0%
GAATTTCAACAGTTCTATCA+TGG + chr4_1:76761168-76761187 Msa0573540:intron 30.0%
ATCAGAAATTTGAGTCGATT+TGG + chr4_1:76761192-76761211 Msa0573540:intron 30.0%
AGAATTTCAACAGAACATCA+TGG + chr4_1:76761471-76761490 Msa0573540:intron 30.0%
TTGAATTTGGTAGGACTTAA+AGG - chr4_1:76761720-76761739 None:intergenic 30.0%
ATCTTCAAGAGAGTTGAATT+TGG - chr4_1:76761733-76761752 None:intergenic 30.0%
!!! GGGTTTTAAAGAAAACTTAG+GGG - chr4_1:76762025-76762044 None:intergenic 30.0%
!! AAGTATTTGTTGTGTCATCT+TGG + chr4_1:76762094-76762113 Msa0573540:intron 30.0%
!! AGTATTTGTTGTGTCATCTT+GGG + chr4_1:76762095-76762114 Msa0573540:intron 30.0%
TTCGTTTGATTCAATGAACT+CGG - chr4_1:76762270-76762289 None:intergenic 30.0%
TTAATTTATGGCACTACAAG+TGG - chr4_1:76762569-76762588 None:intergenic 30.0%
TAATACATTATACCGATGAG+CGG + chr4_1:76762656-76762675 Msa0573540:intron 30.0%
!!! GGTTTTTTAATGTGTTCTCT+TGG - chr4_1:76763084-76763103 None:intergenic 30.0%
GAAAATACAGAAGATAGAAG+CGG - chr4_1:76763526-76763545 None:intergenic 30.0%
TCAAGTGTTTAAGGATGAAA+GGG - chr4_1:76763550-76763569 None:intergenic 30.0%
TTCAAGTGTTTAAGGATGAA+AGG - chr4_1:76763551-76763570 None:intergenic 30.0%
ACGATATAAGTGGTTGAATT+TGG - chr4_1:76763981-76764000 None:intergenic 30.0%
GAAAACAAAGACGATATAAG+TGG - chr4_1:76763991-76764010 None:intergenic 30.0%
TCTTAATATAGTCAAACAGC+AGG + chr4_1:76764046-76764065 Msa0573540:intron 30.0%
ATTTGAATGCTGCTCAAAAA+CGG - chr4_1:76764141-76764160 None:intergenic 30.0%
GTTATGCATCAGAATCATAA+TGG - chr4_1:76764219-76764238 None:intergenic 30.0%
TGATGTGTCTAGTATCATAT+TGG + chr4_1:76764357-76764376 Msa0573540:intron 30.0%
! TTTTGACATTTTCCTCATCT+GGG - chr4_1:76764562-76764581 None:intergenic 30.0%
!! ATTTTGACATTTTCCTCATC+TGG - chr4_1:76764563-76764582 None:intergenic 30.0%
TGTCAAAATAGTGATGCAAA+TGG + chr4_1:76764574-76764593 Msa0573540:five_prime_UTR 30.0%
CATAATTAAGCTCCTTTACA+CGG - chr4_1:76764652-76764671 None:intergenic 30.0%
! CTTTTACTGTTGTGATTGTT+GGG + chr4_1:76764853-76764872 Msa0573540:five_prime_UTR 30.0%
! ACTAGGTACTGCAATATTAA+GGG - chr4_1:76764903-76764922 None:intergenic 30.0%
AATTGATATCTTTCCATGCA+GGG + chr4_1:76764974-76764993 Msa0573540:intron 30.0%
TCACGGTTAAAATGCATAAT+AGG - chr4_1:76765022-76765041 None:intergenic 30.0%
! AATTTCACATCTTTTCCTGA+AGG - chr4_1:76765156-76765175 None:intergenic 30.0%
TGATAAAAAAATTGACGGCA+AGG - chr4_1:76765295-76765314 None:intergenic 30.0%
!! TAGAATTTAAGGGTTTTGGT+TGG - chr4_1:76765318-76765337 None:intergenic 30.0%
!! TTCAGTGAAATCTGTTGTTT+TGG + chr4_1:76765492-76765511 Msa0573540:intron 30.0%
TTATTTGGAAGATGCATTCA+CGG - chr4_1:76765750-76765769 None:intergenic 30.0%
ATTCTTTGATTGTAGAGAAG+TGG + chr4_1:76765775-76765794 Msa0573540:intron 30.0%
ATTCAACAACTACGAAAGAA+AGG - chr4_1:76765884-76765903 None:intergenic 30.0%
TAACTCGTATAATCTGTGTT+TGG + chr4_1:76765947-76765966 Msa0573540:intron 30.0%
TAGAAGAGATTCACTTTGTT+GGG + chr4_1:76765995-76766014 Msa0573540:five_prime_UTR 30.0%
TCTGGAAACAAAAATAATGC+AGG + chr4_1:76766032-76766051 Msa0573540:five_prime_UTR 30.0%
CTGTCTTGTAAATCATTTAC+AGG + chr4_1:76766338-76766357 Msa0573540:CDS 30.0%
!! TTTACAGGTTGATATTGCTT+TGG + chr4_1:76766353-76766372 Msa0573540:CDS 30.0%
!! TTACATTGATAGCGTAGAAA+AGG - chr4_1:76766513-76766532 None:intergenic 30.0%
!!! GAAATGAGAAGTTGTTTTTC+CGG - chr4_1:76766548-76766567 None:intergenic 30.0%
! ATCATGGTTTAAAGTTGAGA+TGG - chr4_1:76766572-76766591 None:intergenic 30.0%
! GGAGCTTTTGAATTTTATCA+TGG - chr4_1:76766588-76766607 None:intergenic 30.0%
TCACATCTCTTTATCTACAA+TGG + chr4_1:76766614-76766633 Msa0573540:intron 30.0%
ATCTTGAATTGTGGATGAAA+GGG + chr4_1:76766638-76766657 Msa0573540:intron 30.0%
! ATTGGTAGCTATGTAAAATC+CGG - chr4_1:76766746-76766765 None:intergenic 30.0%
! GAGCATGAATATTTGCATTT+TGG + chr4_1:76766871-76766890 Msa0573540:intron 30.0%
!! TCAGTTGATGTTGAAGTTTT+AGG + chr4_1:76766987-76767006 Msa0573540:intron 30.0%
!! CAGTTGATGTTGAAGTTTTA+GGG + chr4_1:76766988-76767007 Msa0573540:intron 30.0%
TTCAACAGTCAAAGCAAAAA+AGG - chr4_1:76767186-76767205 None:intergenic 30.0%
GTTGCAATTGCAAATTGTAA+TGG + chr4_1:76767350-76767369 Msa0573540:intron 30.0%
ATTATCCTGTTTCAGATTCA+AGG + chr4_1:76767436-76767455 Msa0573540:intron 30.0%
GAATTTAAAAGGAGAAGACT+TGG - chr4_1:76767575-76767594 None:intergenic 30.0%
TTTCATTTCAAGCTCTTAGT+GGG - chr4_1:76767974-76767993 None:intergenic 30.0%
TGCAACTTTACAAAATCAAC+TGG + chr4_1:76768049-76768068 Msa0573540:three_prime_UTR 30.0%
! CTTTCACCAATTAGTAGTTT+TGG + chr4_1:76768120-76768139 Msa0573540:three_prime_UTR 30.0%
ATAGAAGAACACCAAACAAA+TGG - chr4_1:76768208-76768227 None:intergenic 30.0%
! AAAAAATCTGAGACACAGAG+TGG + chr4_1:76756534-76756553 Msa0573540:five_prime_UTR 35.0%
! AAAAATCTGAGACACAGAGT+GGG + chr4_1:76756535-76756554 Msa0573540:five_prime_UTR 35.0%
TGATACTGTTTATGAGCTGT+TGG + chr4_1:76757119-76757138 Msa0573540:five_prime_UTR 35.0%
!! GGTTTTAGCAGAATTCAGTT+CGG + chr4_1:76757182-76757201 Msa0573540:five_prime_UTR 35.0%
! AATTTGGCGAAGTTGTTGTT+AGG - chr4_1:76757460-76757479 None:intergenic 35.0%
! GTTACGAAGAGGTGATTTTT+GGG + chr4_1:76757767-76757786 Msa0573540:intron 35.0%
TATGCTGAAAGGTTACCAAT+TGG + chr4_1:76757831-76757850 Msa0573540:five_prime_UTR 35.0%
TGACAGCCATATTGCATAAA+TGG - chr4_1:76757920-76757939 None:intergenic 35.0%
! TATGCTATGGTTGTGTTGTT+TGG + chr4_1:76757995-76758014 Msa0573540:intron 35.0%
!! CTACACTCTGAAATTGTACA+AGG - chr4_1:76758048-76758067 None:intergenic 35.0%
!! GAGTGTAGTTGAGTTGATAA+AGG + chr4_1:76758060-76758079 Msa0573540:intron 35.0%
CAACAAAACAAGAAAACCGT+GGG - chr4_1:76758159-76758178 None:intergenic 35.0%
TCAACAAAACAAGAAAACCG+TGG - chr4_1:76758160-76758179 None:intergenic 35.0%
! TAACTTTTGGCAATTTTCCG+GGG + chr4_1:76758216-76758235 Msa0573540:intron 35.0%
ACTAGTAATGTTGTCTTGCT+TGG + chr4_1:76758245-76758264 Msa0573540:intron 35.0%
CATAACTGCAGACTGTTATT+GGG - chr4_1:76758296-76758315 None:intergenic 35.0%
TCATAACTGCAGACTGTTAT+TGG - chr4_1:76758297-76758316 None:intergenic 35.0%
!! ACTGTTTTAAGCTCATTCGT+TGG - chr4_1:76758334-76758353 None:intergenic 35.0%
GTTTAATGCATAGAGGAACA+TGG - chr4_1:76758386-76758405 None:intergenic 35.0%
! ATCTCTGGTTTAATGCATAG+AGG - chr4_1:76758393-76758412 None:intergenic 35.0%
GAAGCTGAACATGAGAAATA+GGG - chr4_1:76758445-76758464 None:intergenic 35.0%
AGAAGCTGAACATGAGAAAT+AGG - chr4_1:76758446-76758465 None:intergenic 35.0%
ACTTCATCATGTAGAGGAAA+AGG + chr4_1:76758505-76758524 Msa0573540:five_prime_UTR 35.0%
!! CTCTGTTAACATTGATTCCA+GGG - chr4_1:76758542-76758561 None:intergenic 35.0%
AGAGATTGAATCTGCCTATT+TGG + chr4_1:76758738-76758757 Msa0573540:five_prime_UTR 35.0%
TCCATAATGAACCTGTTGTT+GGG + chr4_1:76758900-76758919 Msa0573540:five_prime_UTR 35.0%
ACATGATATATCAACTCACG+TGG - chr4_1:76758962-76758981 None:intergenic 35.0%
TCTGATGCTGATATATCTGA+GGG - chr4_1:76759064-76759083 None:intergenic 35.0%
AAGAGGGTAAAATTTCTTCG+TGG + chr4_1:76759209-76759228 Msa0573540:five_prime_UTR 35.0%
AGAGGGTAAAATTTCTTCGT+GGG + chr4_1:76759210-76759229 Msa0573540:five_prime_UTR 35.0%
AAATATGGGGTGAGTTCAAA+GGG + chr4_1:76759273-76759292 Msa0573540:intron 35.0%
TACTCTCTGATTCTGATATG+GGG + chr4_1:76759349-76759368 Msa0573540:intron 35.0%
AAAAACAGGACGAAAATCTC+AGG - chr4_1:76759552-76759571 None:intergenic 35.0%
TGTTAGCTCATAGGAAAAAC+AGG - chr4_1:76759566-76759585 None:intergenic 35.0%
!! TTTTGATTGTTCTCAGCAGT+AGG + chr4_1:76759798-76759817 Msa0573540:intron 35.0%
CTGCTTAAACATATAAACGC+TGG - chr4_1:76759827-76759846 None:intergenic 35.0%
!! CTTCACAACATGCCTTATTT+AGG - chr4_1:76759976-76759995 None:intergenic 35.0%
CTAAATAAGGCATGTTGTGA+AGG + chr4_1:76759974-76759993 Msa0573540:intron 35.0%
TTATTCTGTCAAATGGGATG+CGG + chr4_1:76760030-76760049 Msa0573540:five_prime_UTR 35.0%
GAATCAAAACCTGATCATCA+AGG - chr4_1:76760079-76760098 None:intergenic 35.0%
!!! GATCAGGTTTTGATTCTTCT+AGG + chr4_1:76760083-76760102 Msa0573540:intron 35.0%
ACCTGACTAAACTCTATTAG+GGG - chr4_1:76760239-76760258 None:intergenic 35.0%
GACCTGACTAAACTCTATTA+GGG - chr4_1:76760240-76760259 None:intergenic 35.0%
TGACCTGACTAAACTCTATT+AGG - chr4_1:76760241-76760260 None:intergenic 35.0%
GTTCATAAACCAATCCAACT+TGG + chr4_1:76760284-76760303 Msa0573540:intron 35.0%
!! AATTTTGACCCAAGTTGGAT+TGG - chr4_1:76760296-76760315 None:intergenic 35.0%
TAGTCCATACTGTTAAGTTC+TGG + chr4_1:76760549-76760568 Msa0573540:intron 35.0%
TCTATATGCTACACTACACT+GGG - chr4_1:76760881-76760900 None:intergenic 35.0%
TTCTATATGCTACACTACAC+TGG - chr4_1:76760882-76760901 None:intergenic 35.0%
TTCAGTTGCATCAGTTACAA+GGG - chr4_1:76760906-76760925 None:intergenic 35.0%
ATTCAGTTGCATCAGTTACA+AGG - chr4_1:76760907-76760926 None:intergenic 35.0%
TCTATATGCTACACTACACT+GGG - chr4_1:76760881-76760900 None:intergenic 35.0%
TTCTATATGCTACACTACAC+TGG - chr4_1:76760882-76760901 None:intergenic 35.0%
TTCAGTTGCATCAGTTACAA+GGG - chr4_1:76760906-76760925 None:intergenic 35.0%
ATTCAGTTGCATCAGTTACA+AGG - chr4_1:76760907-76760926 None:intergenic 35.0%
TTCAGTTGCATCAGTTACAA+GGG - chr4_1:76760906-76760925 None:intergenic 35.0%
ATTCAGTTGCATCAGTTACA+AGG - chr4_1:76760907-76760926 None:intergenic 35.0%
ATTTGGAGAACTATCTCCTT+TGG + chr4_1:76761637-76761656 Msa0573540:intron 35.0%
TCAAGAGAGTTGAATTTGGT+AGG - chr4_1:76761729-76761748 None:intergenic 35.0%
TAATTAGCTGCAAAAACTCG+TGG + chr4_1:76761816-76761835 Msa0573540:intron 35.0%
TAAAGAAAACTTAGGGGACT+GGG - chr4_1:76762019-76762038 None:intergenic 35.0%
TTAAAGAAAACTTAGGGGAC+TGG - chr4_1:76762020-76762039 None:intergenic 35.0%
ATCATACAAAAGTTGGGGAT+TGG - chr4_1:76762070-76762089 None:intergenic 35.0%
!!! TGGGTTTCAGTTTTGAGAAA+CGG + chr4_1:76762136-76762155 Msa0573540:intron 35.0%
!! ATTGGAGATGGATTAATGTC+AGG - chr4_1:76762348-76762367 None:intergenic 35.0%
! TATGTCACTTCAGCAGATAT+TGG - chr4_1:76762366-76762385 None:intergenic 35.0%
! ATCTTCACCGGTTATTCATA+TGG + chr4_1:76762768-76762787 Msa0573540:five_prime_UTR 35.0%
! TCTTCACCGGTTATTCATAT+GGG + chr4_1:76762769-76762788 Msa0573540:five_prime_UTR 35.0%
GAGTATTTCTCTTGCTCAAT+GGG + chr4_1:76762816-76762835 Msa0573540:five_prime_UTR 35.0%
TTATAGACCATCTGTCCTAA+TGG + chr4_1:76762872-76762891 Msa0573540:five_prime_UTR 35.0%
TCTCATATATGCACCAATCT+TGG - chr4_1:76762931-76762950 None:intergenic 35.0%
! TTTAAAATGAAGCCGATGCA+AGG - chr4_1:76763487-76763506 None:intergenic 35.0%
AAGATAGAAGCGGTTGAATT+TGG - chr4_1:76763516-76763535 None:intergenic 35.0%
! CATGCACTTTCAAGTGTTTA+AGG - chr4_1:76763559-76763578 None:intergenic 35.0%
!!! TCGCTTTTCTGCTTTTTGTT+CGG + chr4_1:76763854-76763873 Msa0573540:intron 35.0%
!!! TTTTCTGCTTTTTGTTCGGT+TGG + chr4_1:76763858-76763877 Msa0573540:intron 35.0%
TCCAAGACTATGTTACATAC+AGG + chr4_1:76763895-76763914 Msa0573540:intron 35.0%
ACCTGTATGTAACATAGTCT+TGG - chr4_1:76763899-76763918 None:intergenic 35.0%
TCAAGTGTCTAACGATGAAA+GGG - chr4_1:76764015-76764034 None:intergenic 35.0%
TTCAAGTGTCTAACGATGAA+AGG - chr4_1:76764016-76764035 None:intergenic 35.0%
TATACTTCTTCGGAAAAGCT+GGG - chr4_1:76764173-76764192 None:intergenic 35.0%
ATATACTTCTTCGGAAAAGC+TGG - chr4_1:76764174-76764193 None:intergenic 35.0%
!! TCATAATGGACTCAGATATG+AGG - chr4_1:76764205-76764224 None:intergenic 35.0%
TGAATTGTTTAACACAGCCT+AGG + chr4_1:76764257-76764276 Msa0573540:intron 35.0%
CTAGACACATCAAATTTCCA+CGG - chr4_1:76764349-76764368 None:intergenic 35.0%
AACAAATTTAACCCCAGATG+AGG + chr4_1:76764547-76764566 Msa0573540:five_prime_UTR 35.0%
! TTTGACATTTTCCTCATCTG+GGG - chr4_1:76764561-76764580 None:intergenic 35.0%
CGGTTTGTAAAAGCAGTATA+GGG - chr4_1:76764632-76764651 None:intergenic 35.0%
ACGGTTTGTAAAAGCAGTAT+AGG - chr4_1:76764633-76764652 None:intergenic 35.0%
! TGCTTTTACAAACCGTGTAA+AGG + chr4_1:76764637-76764656 Msa0573540:five_prime_UTR 35.0%
CGTGTAAAGGAGCTTAATTA+TGG + chr4_1:76764650-76764669 Msa0573540:five_prime_UTR 35.0%
ATCACAACAGTAAAAGCTGA+AGG - chr4_1:76764849-76764868 None:intergenic 35.0%
! GCTTTTACTGTTGTGATTGT+TGG + chr4_1:76764852-76764871 Msa0573540:five_prime_UTR 35.0%
! ATTAAGGGAAGTGCAATAGT+AGG - chr4_1:76764888-76764907 None:intergenic 35.0%
! CACTAGGTACTGCAATATTA+AGG - chr4_1:76764904-76764923 None:intergenic 35.0%
CTGCATGGAAAGATATCAAT+TGG - chr4_1:76764975-76764994 None:intergenic 35.0%
CAATTGATATCTTTCCATGC+AGG + chr4_1:76764973-76764992 Msa0573540:intron 35.0%
AAATGCATAATAGGTTCAGG+AGG - chr4_1:76765013-76765032 None:intergenic 35.0%
TTTAACCGTGATGATCTGAA+AGG + chr4_1:76765031-76765050 Msa0573540:five_prime_UTR 35.0%
!!! TTGTGTAGTTTTGTACCTTC+AGG + chr4_1:76765138-76765157 Msa0573540:intron 35.0%
!!! TTTTGGCTTAGCTCTACTTT+TGG + chr4_1:76765208-76765227 Msa0573540:intron 35.0%
!! TCTACTTTTGGTCTCTAGTT+TGG + chr4_1:76765220-76765239 Msa0573540:intron 35.0%
!!! AATCTGTTGTTTTGGTGAGA+AGG + chr4_1:76765500-76765519 Msa0573540:intron 35.0%
GCTTTAACATCATCTCGAAA+AGG + chr4_1:76765622-76765641 Msa0573540:intron 35.0%
TTTCGTAGTTGTTGAATCCA+TGG + chr4_1:76765887-76765906 Msa0573540:intron 35.0%
AATCTGTGTTTGGTCATGTT+TGG + chr4_1:76765957-76765976 Msa0573540:intron 35.0%
ATCTGTGTTTGGTCATGTTT+GGG + chr4_1:76765958-76765977 Msa0573540:intron 35.0%
GTAGAAGAGATTCACTTTGT+TGG + chr4_1:76765994-76766013 Msa0573540:five_prime_UTR 35.0%
AAACACCTACAGAGTATATC+TGG - chr4_1:76766159-76766178 None:intergenic 35.0%
GATATACTCTGTAGGTGTTT+CGG + chr4_1:76766159-76766178 Msa0573540:intron 35.0%
TCTTTGCTCAATTTCCAGTA+CGG - chr4_1:76766430-76766449 None:intergenic 35.0%
GATAAAGAGATGTGAGAAGA+AGG - chr4_1:76766609-76766628 None:intergenic 35.0%
TACAATGGCATCTTGAATTG+TGG + chr4_1:76766629-76766648 Msa0573540:intron 35.0%
CATCTTGAATTGTGGATGAA+AGG + chr4_1:76766637-76766656 Msa0573540:intron 35.0%
TCAGGAAAATTATTACTGGC+TGG + chr4_1:76766719-76766738 Msa0573540:intron 35.0%
! AAAATTATTACTGGCTGGAC+CGG + chr4_1:76766724-76766743 Msa0573540:CDS 35.0%
TACCAATCAAGAGTCTATTC+TGG + chr4_1:76766759-76766778 Msa0573540:CDS 35.0%
TGAAATCCATTCCTTTCCAA+CGG - chr4_1:76766903-76766922 None:intergenic 35.0%
CAAAACTAAAGCAATGGTAC+TGG - chr4_1:76766936-76766955 None:intergenic 35.0%
!! GTTAGTCTTCTGAATCTAGA+GGG + chr4_1:76767010-76767029 Msa0573540:intron 35.0%
!!! GCGGTATACTGTTTTTTACA+AGG - chr4_1:76767538-76767557 None:intergenic 35.0%
!! TGGATTGGAATACTGATTTC+AGG - chr4_1:76767597-76767616 None:intergenic 35.0%
AAGCAAAGGTCTATTCTTCT+AGG + chr4_1:76767638-76767657 Msa0573540:intron 35.0%
GGCATAAATCTTTCCACAAT+AGG - chr4_1:76767664-76767683 None:intergenic 35.0%
ATTGTGGAAAGATTTATGCC+TGG + chr4_1:76767664-76767683 Msa0573540:intron 35.0%
TTGTGGAAAGATTTATGCCT+GGG + chr4_1:76767665-76767684 Msa0573540:intron 35.0%
!! GAATATGCTTGTTATAACCC+AGG - chr4_1:76767685-76767704 None:intergenic 35.0%
TCCAGCTAAAATCTGCAATA+GGG - chr4_1:76767725-76767744 None:intergenic 35.0%
TTCCAGCTAAAATCTGCAAT+AGG - chr4_1:76767726-76767745 None:intergenic 35.0%
!!! CAAGTCAGTTTTGACTTAGA+AGG + chr4_1:76767922-76767941 Msa0573540:three_prime_UTR 35.0%
! TTTGACTTAGAAGGCAAGTT+AGG + chr4_1:76767931-76767950 Msa0573540:three_prime_UTR 35.0%
AGTTAGGTGTTAGTTGTATG+TGG + chr4_1:76767947-76767966 Msa0573540:three_prime_UTR 35.0%
TTCATTTCAAGCTCTTAGTG+GGG - chr4_1:76767973-76767992 None:intergenic 35.0%
GTTTCATTTCAAGCTCTTAG+TGG - chr4_1:76767975-76767994 None:intergenic 35.0%
!! TAGTATAGATTGATTTGCGC+TGG + chr4_1:76768000-76768019 Msa0573540:three_prime_UTR 35.0%
AATCAACTGGAAAATGGATG+CGG + chr4_1:76768062-76768081 Msa0573540:three_prime_UTR 35.0%
AGAGTGAGAGTGAAGAAGAA+TGG + chr4_1:76756576-76756595 Msa0573540:five_prime_UTR 40.0%
!! AAGCCTTGTTTCCTTGAGAT+CGG - chr4_1:76756628-76756647 None:intergenic 40.0%
AAATACTAACCCGACTCTGA+CGG - chr4_1:76756797-76756816 None:intergenic 40.0%
! GTCTCCAAAATCAGAAGTGT+CGG - chr4_1:76756855-76756874 None:intergenic 40.0%
CTTGAAGAAGAAGATGAACG+TGG + chr4_1:76756967-76756986 Msa0573540:five_prime_UTR 40.0%
!! GAAAGTATCGGAGCTGAATT+TGG + chr4_1:76757066-76757085 Msa0573540:five_prime_UTR 40.0%
ATTGTTGTCTCAGGCGATTT+CGG + chr4_1:76757161-76757180 Msa0573540:five_prime_UTR 40.0%
TTTAGCAGAATTCAGTTCGG+AGG + chr4_1:76757185-76757204 Msa0573540:five_prime_UTR 40.0%
! AGAATTCAGTTCGGAGGTAT+TGG + chr4_1:76757191-76757210 Msa0573540:intron 40.0%
!! TCGAGTATCGAAAGATGACT+TGG + chr4_1:76757581-76757600 Msa0573540:five_prime_UTR 40.0%
! GATGACTTGGAGAAAGAAAG+AGG + chr4_1:76757594-76757613 Msa0573540:five_prime_UTR 40.0%
! TCTGTTGATGGAAGGTTCAA+AGG + chr4_1:76757683-76757702 Msa0573540:five_prime_UTR 40.0%
TTGTATTGGAGGTTACGAAG+AGG + chr4_1:76757756-76757775 Msa0573540:intron 40.0%
! GGTTACGAAGAGGTGATTTT+TGG + chr4_1:76757766-76757785 Msa0573540:intron 40.0%
ATTGGTTGCAGTATGCTGAA+AGG + chr4_1:76757820-76757839 Msa0573540:intron 40.0%
ATCACTTTCTCGAGTCCAAT+TGG - chr4_1:76757849-76757868 None:intergenic 40.0%
TTGGACTCGAGAAAGTGATT+CGG + chr4_1:76757850-76757869 Msa0573540:five_prime_UTR 40.0%
AATATGGCTGTCATAGCAGT+TGG + chr4_1:76757927-76757946 Msa0573540:five_prime_UTR 40.0%
! TGGAGATTTTTCTGACACAC+AGG + chr4_1:76757947-76757966 Msa0573540:five_prime_UTR 40.0%
! TTTGTTGAATCTGAAGCTGC+TGG + chr4_1:76758172-76758191 Msa0573540:five_prime_UTR 40.0%
! TTGTTGAATCTGAAGCTGCT+GGG + chr4_1:76758173-76758192 Msa0573540:five_prime_UTR 40.0%
! AACTTTTGGCAATTTTCCGG+GGG + chr4_1:76758217-76758236 Msa0573540:intron 40.0%
ACATTACTAGTGAAAACCCC+CGG - chr4_1:76758236-76758255 None:intergenic 40.0%
!! CCTCTGTTAACATTGATTCC+AGG - chr4_1:76758543-76758562 None:intergenic 40.0%
CCTGGAATCAATGTTAACAG+AGG + chr4_1:76758540-76758559 Msa0573540:five_prime_UTR 40.0%
AATGAGGCTTCTCAGATCAA+TGG - chr4_1:76758574-76758593 None:intergenic 40.0%
!!! TATTTTAGGTTGCTAGGGTG+CGG + chr4_1:76758662-76758681 Msa0573540:intron 40.0%
! CACGGACTATAGATACTTCA+CGG - chr4_1:76758705-76758724 None:intergenic 40.0%
AACTTGATCTCGCTCCAAAT+AGG - chr4_1:76758755-76758774 None:intergenic 40.0%
ATATTCATCTCTCAAGCTCG+TGG - chr4_1:76758782-76758801 None:intergenic 40.0%
CTCCATAATGAACCTGTTGT+TGG + chr4_1:76758899-76758918 Msa0573540:five_prime_UTR 40.0%
TCCCAACAACAGGTTCATTA+TGG - chr4_1:76758904-76758923 None:intergenic 40.0%
TCATACACAATCCCAACAAC+AGG - chr4_1:76758914-76758933 None:intergenic 40.0%
CTGATGCTGATATATCTGAG+GGG - chr4_1:76759063-76759082 None:intergenic 40.0%
CTCTGATGCTGATATATCTG+AGG - chr4_1:76759065-76759084 None:intergenic 40.0%
CTCAGATATATCAGCATCAG+AGG + chr4_1:76759063-76759082 Msa0573540:intron 40.0%
TAGCTGTGTCATAAAGACCA+TGG + chr4_1:76759120-76759139 Msa0573540:five_prime_UTR 40.0%
ATCAAACACGGCAAATGTTC+GGG - chr4_1:76759149-76759168 None:intergenic 40.0%
CATCAAACACGGCAAATGTT+CGG - chr4_1:76759150-76759169 None:intergenic 40.0%
AGTCAATCTTCTTGAGGAAG+AGG + chr4_1:76759192-76759211 Msa0573540:five_prime_UTR 40.0%
GTCAATCTTCTTGAGGAAGA+GGG + chr4_1:76759193-76759212 Msa0573540:five_prime_UTR 40.0%
CTTTGAACTCACCCCATATT+TGG - chr4_1:76759274-76759293 None:intergenic 40.0%
CAAATATGGGGTGAGTTCAA+AGG + chr4_1:76759272-76759291 Msa0573540:intron 40.0%
AATATGGGGTGAGTTCAAAG+GGG + chr4_1:76759274-76759293 Msa0573540:intron 40.0%
CAGAGAGTAAAGAACTGTGT+AGG - chr4_1:76759338-76759357 None:intergenic 40.0%
AGCATGTGGGAATTACACTA+TGG - chr4_1:76759478-76759497 None:intergenic 40.0%
AGCTGTGAATGTTAGCTCAT+AGG - chr4_1:76759575-76759594 None:intergenic 40.0%
AGTGATTATCATGACCCATG+AGG + chr4_1:76759597-76759616 Msa0573540:intron 40.0%
AAGGCATGTTGTGAAGGAAT+TGG + chr4_1:76759980-76759999 Msa0573540:intron 40.0%
! TACAGACTTCCTTGATGATC+AGG + chr4_1:76760067-76760086 Msa0573540:five_prime_UTR 40.0%
ACCCCTAATAGAGTTTAGTC+AGG + chr4_1:76760235-76760254 Msa0573540:intron 40.0%
! ATTGGTTTATGAACACCCCT+GGG - chr4_1:76760278-76760297 None:intergenic 40.0%
!! TGTGCAATTTTGACCCAAGT+TGG - chr4_1:76760301-76760320 None:intergenic 40.0%
!! TATTTGATTGGCTTGGCCTT+TGG + chr4_1:76760358-76760377 Msa0573540:intron 40.0%
! TTCTGAAGAAACTGAAGCAG+AGG - chr4_1:76760729-76760748 None:intergenic 40.0%
TGTTTATGACCAGCTATAGC+CGG - chr4_1:76761055-76761074 None:intergenic 40.0%
TGTTTATGACCAGCTATAGC+CGG - chr4_1:76761055-76761074 None:intergenic 40.0%
TCATGGAGGAAGATGATACA+AGG - chr4_1:76761582-76761601 None:intergenic 40.0%
AATCAAGCTTTCAGAGATGG+TGG - chr4_1:76761620-76761639 None:intergenic 40.0%
CCAAATCAAGCTTTCAGAGA+TGG - chr4_1:76761623-76761642 None:intergenic 40.0%
! CCATCTCTGAAAGCTTGATT+TGG + chr4_1:76761620-76761639 Msa0573540:intron 40.0%
GCAAATCACATATCTCGTAC+AGG + chr4_1:76761753-76761772 Msa0573540:intron 40.0%
! CGTACAGGATCAAATCCTTT+TGG + chr4_1:76761768-76761787 Msa0573540:intron 40.0%
!! AGGATCAAATCCTTTTGGCT+TGG + chr4_1:76761773-76761792 Msa0573540:intron 40.0%
TAGATTGAAGCCAAGCCAAA+AGG - chr4_1:76761786-76761805 None:intergenic 40.0%
! GCAAAAACTCGTGGATTTTG+CGG + chr4_1:76761825-76761844 Msa0573540:intron 40.0%
! CAAAAACTCGTGGATTTTGC+GGG + chr4_1:76761826-76761845 Msa0573540:intron 40.0%
GGAACAAAGATCAGGAGTTA+GGG - chr4_1:76761984-76762003 None:intergenic 40.0%
AAAGAAAACTTAGGGGACTG+GGG - chr4_1:76762018-76762037 None:intergenic 40.0%
GTGCATTTGGATATCAGCTT+GGG + chr4_1:76762117-76762136 Msa0573540:intron 40.0%
!!! GGGTTTCAGTTTTGAGAAAC+GGG + chr4_1:76762137-76762156 Msa0573540:intron 40.0%
!!! GGTTTCAGTTTTGAGAAACG+GGG + chr4_1:76762138-76762157 Msa0573540:intron 40.0%
!!! AGTTTTGAGAAACGGGGAAA+AGG + chr4_1:76762144-76762163 Msa0573540:intron 40.0%
!!! GTTTTGAGAAACGGGGAAAA+GGG + chr4_1:76762145-76762164 Msa0573540:intron 40.0%
!! CTCTGGGACACTTTATTGTT+CGG - chr4_1:76762179-76762198 None:intergenic 40.0%
CAAACCAACAAATTGCCTCT+GGG - chr4_1:76762195-76762214 None:intergenic 40.0%
!! GGCAATTTGTTGGTTTGCAA+AGG + chr4_1:76762198-76762217 Msa0573540:intron 40.0%
CAAACGAAAGTTGTTGCTCT+AGG + chr4_1:76762282-76762301 Msa0573540:intron 40.0%
ACTTCAGCAGATATTGGAGA+TGG - chr4_1:76762360-76762379 None:intergenic 40.0%
! AATAATGGAACACCGCTCAT+CGG - chr4_1:76762683-76762702 None:intergenic 40.0%
!!! GCGGTGTTCCATTATTTTTG+TGG + chr4_1:76762687-76762706 Msa0573540:intron 40.0%
ATCTACAGATGTGTCACAAC+AGG + chr4_1:76762743-76762762 Msa0573540:intron 40.0%
TCACAACAGGTTATCTTCAC+CGG + chr4_1:76762756-76762775 Msa0573540:intron 40.0%
! CTTCACCGGTTATTCATATG+GGG + chr4_1:76762770-76762789 Msa0573540:five_prime_UTR 40.0%
! TTCACCGGTTATTCATATGG+GGG + chr4_1:76762771-76762790 Msa0573540:five_prime_UTR 40.0%
TAAGCCCCCATATGAATAAC+CGG - chr4_1:76762778-76762797 None:intergenic 40.0%
CAAGAGAAATACTCGCTTTC+TGG - chr4_1:76762810-76762829 None:intergenic 40.0%
CGAGTATTTCTCTTGCTCAA+TGG + chr4_1:76762815-76762834 Msa0573540:five_prime_UTR 40.0%
AGCATATCCATTAGGACAGA+TGG - chr4_1:76762882-76762901 None:intergenic 40.0%
! GATTGCAAAGCAAAGCACTA+GGG - chr4_1:76763345-76763364 None:intergenic 40.0%
AAATCTTCCGATCCTTGCAT+CGG + chr4_1:76763472-76763491 Msa0573540:intron 40.0%
!! GATTACAAAGCATCGCACTT+GGG - chr4_1:76763812-76763831 None:intergenic 40.0%
TTACATACAGGTGCTTGTCT+CGG + chr4_1:76763907-76763926 Msa0573540:intron 40.0%
! GCAAGGATCGGAAGATTTTA+CGG - chr4_1:76763470-76763489 None:intergenic 40.0%
AAATCTTCCGATCCTTGCAT+CGG + chr4_1:76763472-76763491 Msa0573540:intron 40.0%
! GCCTAGGTTCGTTATACTTT+TGG + chr4_1:76764273-76764292 Msa0573540:intron 40.0%
! GCCAAAAGTATAACGAACCT+AGG - chr4_1:76764277-76764296 None:intergenic 40.0%
!! GCTTTCTAAAGTTAGATCCG+TGG + chr4_1:76764329-76764348 Msa0573540:intron 40.0%
AAGTATTCACAAGCTTCCAG+AGG - chr4_1:76764807-76764826 None:intergenic 40.0%
CAAGTGGATGTATACTCACT+AGG - chr4_1:76764920-76764939 None:intergenic 40.0%
GTATACATCCACTTGCCAAA+AGG + chr4_1:76764925-76764944 Msa0573540:intron 40.0%
ATAATAGGTTCAGGAGGCTT+TGG - chr4_1:76765007-76765026 None:intergenic 40.0%
ATGGCTGTTGGAAAAGTGAA+AGG - chr4_1:76765061-76765080 None:intergenic 40.0%
GCATTGCATTCACAAACAGA+AGG + chr4_1:76765097-76765116 Msa0573540:intron 40.0%
! CATTCACAAACAGAAGGTGT+TGG + chr4_1:76765103-76765122 Msa0573540:intron 40.0%
!! ATTTTGGTAGTTCAGAAGCC+AGG + chr4_1:76765389-76765408 Msa0573540:intron 40.0%
! GGAACTTTGGCTGAGTTTTA+AGG + chr4_1:76765420-76765439 Msa0573540:intron 40.0%
AAACATTGTGCTTCCACCAT+GGG - chr4_1:76765809-76765828 None:intergenic 40.0%
TCTGTGTTTGGTCATGTTTG+GGG + chr4_1:76765959-76765978 Msa0573540:intron 40.0%
TTGCCTTCAGCCTTCTTATA+TGG + chr4_1:76766102-76766121 Msa0573540:intron 40.0%
GTACCATATAAGAAGGCTGA+AGG - chr4_1:76766108-76766127 None:intergenic 40.0%
AGAGTATATCTGGTGCATAG+AGG - chr4_1:76766149-76766168 None:intergenic 40.0%
ATGCACCAGATATACTCTGT+AGG + chr4_1:76766151-76766170 Msa0573540:intron 40.0%
GGTAATAAACCCTCAAGAAC+CGG + chr4_1:76766193-76766212 Msa0573540:five_prime_UTR 40.0%
TATGTCTCCACGAACAATAC+CGG - chr4_1:76766215-76766234 None:intergenic 40.0%
ATGTTGCGTCTTCAAGATGA+AGG + chr4_1:76766381-76766400 Msa0573540:CDS 40.0%
GTTGAAACATCCTGTTCTGT+AGG - chr4_1:76766408-76766427 None:intergenic 40.0%
TGAATTGTGGATGAAAGGGA+TGG + chr4_1:76766642-76766661 Msa0573540:intron 40.0%
GAATTGTGGATGAAAGGGAT+GGG + chr4_1:76766643-76766662 Msa0573540:intron 40.0%
CACCAGAATAGACTCTTGAT+TGG - chr4_1:76766764-76766783 None:intergenic 40.0%
! AGAGTCTATTCTGGTGATGT+TGG + chr4_1:76766768-76766787 Msa0573540:CDS 40.0%
! TGATGTTGGCACTTCTTTTG+AGG + chr4_1:76766782-76766801 Msa0573540:CDS 40.0%
AAATCCATTCCTTTCCAACG+GGG - chr4_1:76766901-76766920 None:intergenic 40.0%
GAAATCCATTCCTTTCCAAC+GGG - chr4_1:76766902-76766921 None:intergenic 40.0%
!! GGTTAGTCTTCTGAATCTAG+AGG + chr4_1:76767009-76767028 Msa0573540:intron 40.0%
GCAAATTGTAATGGCAGCAT+AGG + chr4_1:76767359-76767378 Msa0573540:intron 40.0%
CTGTTTCAGATTCAAGGTGA+CGG + chr4_1:76767442-76767461 Msa0573540:intron 40.0%
TGTTTCAGATTCAAGGTGAC+GGG + chr4_1:76767443-76767462 Msa0573540:intron 40.0%
TTCCAATCCACTCGAACAAA+CGG + chr4_1:76767607-76767626 Msa0573540:CDS 40.0%
CTATTCTTCTAGGCCTATTG+TGG + chr4_1:76767648-76767667 Msa0573540:intron 40.0%
!! TCCCTATTGCAGATTTTAGC+TGG + chr4_1:76767721-76767740 Msa0573540:intron 40.0%
!!! CAGATTTTAGCTGGAATTGC+TGG + chr4_1:76767730-76767749 Msa0573540:intron 40.0%
!!! CAGTTTTGGCTCTTAGTTTG+TGG + chr4_1:76767758-76767777 Msa0573540:CDS 40.0%
GAGATAAAGAATCACACTGC+TGG - chr4_1:76767851-76767870 None:intergenic 40.0%
GCACTCTTATTATTCTGTGC+AGG - chr4_1:76768157-76768176 None:intergenic 40.0%
AGTGCTCTTGATTCTTGATG+CGG + chr4_1:76768172-76768191 Msa0573540:three_prime_UTR 40.0%
ATCTGTAAGAAGGGGATATG+TGG + chr4_1:76768230-76768249 Msa0573540:three_prime_UTR 40.0%
TCTGTAAGAAGGGGATATGT+GGG + chr4_1:76768231-76768250 Msa0573540:three_prime_UTR 40.0%
ACTCCGATCTCAAGGAAACA+AGG + chr4_1:76756622-76756641 Msa0573540:five_prime_UTR 45.0%
! AGAGAGGAGTTGGTTCATGT+CGG - chr4_1:76756674-76756693 None:intergenic 45.0%
TGGCTCAGAGAAGATAAGTG+AGG - chr4_1:76756832-76756851 None:intergenic 45.0%
!! TCCAAAATCAGAAGTGTCGG+TGG - chr4_1:76756852-76756871 None:intergenic 45.0%
! AACAATTCCGGCTTGTCAAC+GGG - chr4_1:76757147-76757166 None:intergenic 45.0%
! CAACAATTCCGGCTTGTCAA+CGG - chr4_1:76757148-76757167 None:intergenic 45.0%
ATCGCCTGAGACAACAATTC+CGG - chr4_1:76757159-76757178 None:intergenic 45.0%
!! CGGAGGTATTGGAGTCTATT+CGG + chr4_1:76757202-76757221 Msa0573540:intron 45.0%
GAAAGAAAGAGGAGCTGTCA+TGG + chr4_1:76757605-76757624 Msa0573540:five_prime_UTR 45.0%
! AGCTGTCATGGAAGAGTACA+GGG + chr4_1:76757617-76757636 Msa0573540:five_prime_UTR 45.0%
TGCTCATTGGACTCTGTTGA+TGG + chr4_1:76757671-76757690 Msa0573540:five_prime_UTR 45.0%
! CATTGGACTCTGTTGATGGA+AGG + chr4_1:76757675-76757694 Msa0573540:five_prime_UTR 45.0%
TAAAAATGCCTCACGGTCTC+AGG - chr4_1:76757885-76757904 None:intergenic 45.0%
!!! GATCAGGTGCTGGAATTTTC+TGG - chr4_1:76758096-76758115 None:intergenic 45.0%
TGGAATGTTGGAATAGGTGG+AGG - chr4_1:76758118-76758137 None:intergenic 45.0%
TCCACCTATTCCAACATTCC+AGG + chr4_1:76758117-76758136 Msa0573540:five_prime_UTR 45.0%
ACCTGGAATGTTGGAATAGG+TGG - chr4_1:76758121-76758140 None:intergenic 45.0%
GGAACCTGGAATGTTGGAAT+AGG - chr4_1:76758124-76758143 None:intergenic 45.0%
! TGTGATGGAACCTGGAATGT+TGG - chr4_1:76758130-76758149 None:intergenic 45.0%
TTCCATCACATGATGACCCA+CGG + chr4_1:76758140-76758159 Msa0573540:five_prime_UTR 45.0%
! TGTTGAATCTGAAGCTGCTG+GGG + chr4_1:76758174-76758193 Msa0573540:five_prime_UTR 45.0%
AATAGGGTGGATCCTTCCTA+CGG - chr4_1:76758429-76758448 None:intergenic 45.0%
GCTGAACATGAGAAATAGGG+TGG - chr4_1:76758442-76758461 None:intergenic 45.0%
AAAAGGAACTCTTGAAGCCC+TGG + chr4_1:76758522-76758541 Msa0573540:five_prime_UTR 45.0%
! CACGTGGTAGAAGAGTCTTT+TGG - chr4_1:76758946-76758965 None:intergenic 45.0%
TCAAACACGGCAAATGTTCG+GGG - chr4_1:76759148-76759167 None:intergenic 45.0%
TGATATGGGGCGAGTTCAAA+GGG + chr4_1:76759362-76759381 Msa0573540:intron 45.0%
CCTATAGGGAAAGCCAAGTA+AGG - chr4_1:76759714-76759733 None:intergenic 45.0%
! CCTTACTTGGCTTTCCCTAT+AGG + chr4_1:76759711-76759730 Msa0573540:intron 45.0%
!! GATTGGTTTATGAACACCCC+TGG - chr4_1:76760279-76760298 None:intergenic 45.0%
CGAGCCAGAACTTAACAGTA+TGG - chr4_1:76760556-76760575 None:intergenic 45.0%
AAGAAACTGAAGCAGAGGTG+GGG - chr4_1:76760724-76760743 None:intergenic 45.0%
GAAGAAACTGAAGCAGAGGT+GGG - chr4_1:76760725-76760744 None:intergenic 45.0%
TGAAGAAACTGAAGCAGAGG+TGG - chr4_1:76760726-76760745 None:intergenic 45.0%
CATAACTAAGCGCATAACCG+AGG + chr4_1:76760752-76760771 Msa0573540:intron 45.0%
! ATAACCGAGGTGCTCACATA+TGG + chr4_1:76760765-76760784 Msa0573540:intron 45.0%
AACTCCATATGTGAGCACCT+CGG - chr4_1:76760772-76760791 None:intergenic 45.0%
CTTGACATGACGTCATTCAC+TGG - chr4_1:76760805-76760824 None:intergenic 45.0%
CAGTGAATGACGTCATGTCA+AGG + chr4_1:76760803-76760822 Msa0573540:intron 45.0%
GTCTCCTACTCATCCTAAAC+CGG + chr4_1:76761033-76761052 Msa0573540:intron 45.0%
! ATAGCCGGTTTAGGATGAGT+AGG - chr4_1:76761040-76761059 None:intergenic 45.0%
!! AGTCGATTTGGTGACTTCCT+CGG + chr4_1:76761204-76761223 Msa0573540:intron 45.0%
!! CACTACACTGATTCAGTTGC+CGG - chr4_1:76761244-76761263 None:intergenic 45.0%
GTCTCCTACTCATCCTAAAC+CGG + chr4_1:76761033-76761052 Msa0573540:intron 45.0%
! ATAGCCGGTTTAGGATGAGT+AGG - chr4_1:76761040-76761059 None:intergenic 45.0%
!! AGTCGATTTGGTGACTTCCT+CGG + chr4_1:76761204-76761223 Msa0573540:intron 45.0%
GAAGATGATACAAGGCTGAG+CGG - chr4_1:76761574-76761593 None:intergenic 45.0%
AAAGGAGTTCTTGCTCATGG+AGG - chr4_1:76761596-76761615 None:intergenic 45.0%
GGAAAAGGAGTTCTTGCTCA+TGG - chr4_1:76761599-76761618 None:intergenic 45.0%
!! GCTTTCAGAGATGGTGGAAA+AGG - chr4_1:76761614-76761633 None:intergenic 45.0%
!! CTATCTCCTTTGGTGTCAAC+AGG + chr4_1:76761647-76761666 Msa0573540:intron 45.0%
GTTCAACCTGTTGACACCAA+AGG - chr4_1:76761656-76761675 None:intergenic 45.0%
!! GTGTTTTGAGCAGCATATGC+AGG + chr4_1:76761860-76761879 Msa0573540:intron 45.0%
GTACTGTATGGTTTCTGCCA+TGG - chr4_1:76761901-76761920 None:intergenic 45.0%
! CATCTTGGTTGCATTGGTAG+AGG + chr4_1:76761945-76761964 Msa0573540:intron 45.0%
GGGAACAAAGATCAGGAGTT+AGG - chr4_1:76761985-76762004 None:intergenic 45.0%
GAAGAACGGGAACAAAGATC+AGG - chr4_1:76761992-76762011 None:intergenic 45.0%
AAGAAAACTTAGGGGACTGG+GGG - chr4_1:76762017-76762036 None:intergenic 45.0%
AGGGCAAAAAGGGAGTTCTA+GGG - chr4_1:76762045-76762064 None:intergenic 45.0%
TGTGTCATCTTGGGTGCATT+TGG + chr4_1:76762104-76762123 Msa0573540:intron 45.0%
GGTGCATTTGGATATCAGCT+TGG + chr4_1:76762116-76762135 Msa0573540:intron 45.0%
! CGAACAATAAAGTGTCCCAG+AGG + chr4_1:76762177-76762196 Msa0573540:intron 45.0%
GCAAACCAACAAATTGCCTC+TGG - chr4_1:76762196-76762215 None:intergenic 45.0%
GGTTTGCAAAGGTGATGAGT+CGG + chr4_1:76762209-76762228 Msa0573540:intron 45.0%
ATGAGTCGGTCTAGAGGTTT+AGG + chr4_1:76762223-76762242 Msa0573540:intron 45.0%
TGAGTCGGTCTAGAGGTTTA+GGG + chr4_1:76762224-76762243 Msa0573540:intron 45.0%
! TAGAGGTTTAGGGCTTGGTA+GGG + chr4_1:76762234-76762253 Msa0573540:intron 45.0%
! GTCCTAATGGATATGCTTGC+TGG + chr4_1:76762885-76762904 Msa0573540:five_prime_UTR 45.0%
TGCCAGCAAGCATATCCATT+AGG - chr4_1:76762890-76762909 None:intergenic 45.0%
! CGATTGCAAAGCAAAGCACT+AGG - chr4_1:76763346-76763365 None:intergenic 45.0%
AATGAAGCCGATGCAAGGAT+CGG - chr4_1:76763482-76763501 None:intergenic 45.0%
!! CGATTACAAAGCATCGCACT+TGG - chr4_1:76763813-76763832 None:intergenic 45.0%
TTCAAGATGAAGCCGATGCA+AGG - chr4_1:76763952-76763971 None:intergenic 45.0%
CAAACAGCAGGTGTGTGTTT+AGG + chr4_1:76764058-76764077 Msa0573540:intron 45.0%
AATGCTGCTCAAAAACGGAG+AGG - chr4_1:76764136-76764155 None:intergenic 45.0%
AAGCAGTCTGTGCTCAAGAT+AGG + chr4_1:76764603-76764622 Msa0573540:five_prime_UTR 45.0%
AGCAGTCTGTGCTCAAGATA+GGG + chr4_1:76764604-76764623 Msa0573540:five_prime_UTR 45.0%
! CCAGAGGATCAACCTTTTGT+AGG - chr4_1:76764791-76764810 None:intergenic 45.0%
! CCTACAAAAGGTTGATCCTC+TGG + chr4_1:76764788-76764807 Msa0573540:five_prime_UTR 45.0%
! ATTCAAGGTCTGCTGCCTTT+TGG - chr4_1:76764943-76764962 None:intergenic 45.0%
TGATATCTTTCCATGCAGGG+TGG + chr4_1:76764977-76764996 Msa0573540:intron 45.0%
GCAGTCCTTTCAGATCATCA+CGG - chr4_1:76765039-76765058 None:intergenic 45.0%
! CTTTTCCAACAGCCATCCAT+AGG + chr4_1:76765065-76765084 Msa0573540:five_prime_UTR 45.0%
ATGTACCTATGGATGGCTGT+TGG - chr4_1:76765073-76765092 None:intergenic 45.0%
! TGCACTGATGTACCTATGGA+TGG - chr4_1:76765080-76765099 None:intergenic 45.0%
! GCAATGCACTGATGTACCTA+TGG - chr4_1:76765084-76765103 None:intergenic 45.0%
TTCAGAAGCCAGGAGTTTAG+TGG + chr4_1:76765399-76765418 Msa0573540:intron 45.0%
CCAAAGTTCCACTAAACTCC+TGG - chr4_1:76765410-76765429 None:intergenic 45.0%
CCAGGAGTTTAGTGGAACTT+TGG + chr4_1:76765407-76765426 Msa0573540:intron 45.0%
CAAACATTGTGCTTCCACCA+TGG - chr4_1:76765810-76765829 None:intergenic 45.0%
! CATGGTGGAAGCACAATGTT+TGG + chr4_1:76765808-76765827 Msa0573540:five_prime_UTR 45.0%
GGTACAGATATGCTTTCCTG+TGG + chr4_1:76765829-76765848 Msa0573540:five_prime_UTR 45.0%
TTTCCTGTGGAGCTGAAGAA+TGG + chr4_1:76765842-76765861 Msa0573540:five_prime_UTR 45.0%
TTCCTGTGGAGCTGAAGAAT+GGG + chr4_1:76765843-76765862 Msa0573540:five_prime_UTR 45.0%
! AAAGAAAGGAGCACAGACCA+TGG - chr4_1:76765870-76765889 None:intergenic 45.0%
! ATGTTTGGGGCATGACTTTC+AGG + chr4_1:76765972-76765991 Msa0573540:intron 45.0%
TGGGTTCTTAAGCAAGCTTC+TGG + chr4_1:76766014-76766033 Msa0573540:five_prime_UTR 45.0%
AGGTTCTCCGTTTCAAGCAT+GGG + chr4_1:76766052-76766071 Msa0573540:five_prime_UTR 45.0%
GTAGGTGTTTCGGTATTCCT+TGG + chr4_1:76766169-76766188 Msa0573540:five_prime_UTR 45.0%
TTGAGGGTTTATTACCGCCA+AGG - chr4_1:76766189-76766208 None:intergenic 45.0%
!! CGAACAATACCGGTTCTTGA+GGG - chr4_1:76766205-76766224 None:intergenic 45.0%
!! ACGAACAATACCGGTTCTTG+AGG - chr4_1:76766206-76766225 None:intergenic 45.0%
TCAAGAACCGGTATTGTTCG+TGG + chr4_1:76766205-76766224 Msa0573540:five_prime_UTR 45.0%
TCCAGAGATATCTTCCAAGC+TGG + chr4_1:76766255-76766274 Msa0573540:five_prime_UTR 45.0%
AGATGAAGGACCTACAGAAC+AGG + chr4_1:76766395-76766414 Msa0573540:CDS 45.0%
ACAGGATGTTTCAACCGTAC+TGG + chr4_1:76766413-76766432 Msa0573540:CDS 45.0%
!!! TGCATTTTGGTTTTCCCCGT+TGG + chr4_1:76766884-76766903 Msa0573540:intron 45.0%
!!! TTTGGTTTTCCCCGTTGGAA+AGG + chr4_1:76766889-76766908 Msa0573540:intron 45.0%
! TTTTCCCCGTTGGAAAGGAA+TGG + chr4_1:76766894-76766913 Msa0573540:intron 45.0%
AGTCTTCTGAATCTAGAGGG+AGG + chr4_1:76767013-76767032 Msa0573540:intron 45.0%
! CGTCACCTTGAATCTGAAAC+AGG - chr4_1:76767444-76767463 None:intergenic 45.0%
CTTGGGCATAAGTATCACTG+CGG - chr4_1:76767557-76767576 None:intergenic 45.0%
AACTAAGAGCCAAAACTGCC+AGG - chr4_1:76767756-76767775 None:intergenic 45.0%
GTGCTCTTGATTCTTGATGC+GGG + chr4_1:76768173-76768192 Msa0573540:three_prime_UTR 45.0%
!! GGATCTCTGTGCCATTTGTT+TGG + chr4_1:76768194-76768213 Msa0573540:three_prime_UTR 45.0%
!! CAAAATAAAATAAAAAATTA+CGG - chr4_1:76760491-76760510 None:intergenic 5.0%
AGACACAGAGTGGGAAGAGT+TGG + chr4_1:76756544-76756563 Msa0573540:five_prime_UTR 50.0%
! ATCGGAGTTGCTGCTTCTGA+TGG - chr4_1:76756610-76756629 None:intergenic 50.0%
AAGCAGCAACTCCGATCTCA+AGG + chr4_1:76756614-76756633 Msa0573540:five_prime_UTR 50.0%
GACTTCGGCACTCTCGATAA+CGG + chr4_1:76756712-76756731 Msa0573540:five_prime_UTR 50.0%
! GCCACCGACACTTCTGATTT+TGG + chr4_1:76756848-76756867 Msa0573540:intron 50.0%
CAAGCCGGAATTGTTGTCTC+AGG + chr4_1:76757152-76757171 Msa0573540:five_prime_UTR 50.0%
! GAGCTGTCATGGAAGAGTAC+AGG + chr4_1:76757616-76757635 Msa0573540:five_prime_UTR 50.0%
! GCTGTCATGGAAGAGTACAG+GGG + chr4_1:76757618-76757637 Msa0573540:five_prime_UTR 50.0%
GTTGGAATAGGTGGAGGATC+AGG - chr4_1:76758112-76758131 None:intergenic 50.0%
! GGTCATCATGTGATGGAACC+TGG - chr4_1:76758138-76758157 None:intergenic 50.0%
AACCGTGGGTCATCATGTGA+TGG - chr4_1:76758145-76758164 None:intergenic 50.0%
ATAGGGTGGATCCTTCCTAC+GGG - chr4_1:76758428-76758447 None:intergenic 50.0%
CTGATATGGGGCGAGTTCAA+AGG + chr4_1:76759361-76759380 Msa0573540:intron 50.0%
GATATGGGGCGAGTTCAAAG+GGG + chr4_1:76759363-76759382 Msa0573540:intron 50.0%
!! AGTTCTGGCTCGTACCTATG+TGG + chr4_1:76760564-76760583 Msa0573540:intron 50.0%
CATCCTAAACCGGCTATAGC+TGG + chr4_1:76761043-76761062 Msa0573540:intron 50.0%
! TGACCAGCTATAGCCGGTTT+AGG - chr4_1:76761049-76761068 None:intergenic 50.0%
! ACTGATTCAGTTGCCGGCAA+CGG - chr4_1:76761238-76761257 None:intergenic 50.0%
CATCCTAAACCGGCTATAGC+TGG + chr4_1:76761043-76761062 Msa0573540:intron 50.0%
! TGACCAGCTATAGCCGGTTT+AGG - chr4_1:76761049-76761068 None:intergenic 50.0%
GGCGAAGTAAGAGTTAGCCA+TGG + chr4_1:76761881-76761900 Msa0573540:intron 50.0%
! TGTCTCGAGAGCGTACTGTA+TGG - chr4_1:76761913-76761932 None:intergenic 50.0%
GAGGGCAAAAAGGGAGTTCT+AGG - chr4_1:76762046-76762065 None:intergenic 50.0%
! CAAAAGTTGGGGATTGGCGA+GGG - chr4_1:76762064-76762083 None:intergenic 50.0%
! ACAAAAGTTGGGGATTGGCG+AGG - chr4_1:76762065-76762084 None:intergenic 50.0%
GTGTCCCAGAGGCAATTTGT+TGG + chr4_1:76762188-76762207 Msa0573540:intron 50.0%
AAGGTGATGAGTCGGTCTAG+AGG + chr4_1:76762217-76762236 Msa0573540:intron 50.0%
! CTAGAGGTTTAGGGCTTGGT+AGG + chr4_1:76762233-76762252 Msa0573540:intron 50.0%
! AGAGGTTTAGGGCTTGGTAG+GGG + chr4_1:76762235-76762254 Msa0573540:intron 50.0%
CCAATTTCCCCAGCAATGGT+CGG - chr4_1:76762843-76762862 None:intergenic 50.0%
CACACCAATTTCCCCAGCAA+TGG - chr4_1:76762847-76762866 None:intergenic 50.0%
GCTGGGGAAATTGGTGTGTT+TGG + chr4_1:76762849-76762868 Msa0573540:five_prime_UTR 50.0%
TGACTGTTCACCTTCAGACC+TGG + chr4_1:76762962-76762981 Msa0573540:five_prime_UTR 50.0%
TCACCTTCAGACCTGGAAAC+TGG + chr4_1:76762969-76762988 Msa0573540:five_prime_UTR 50.0%
AAGCCAGTTTCCAGGTCTGA+AGG - chr4_1:76762975-76762994 None:intergenic 50.0%
ATACCTGCAAGCCAGTTTCC+AGG - chr4_1:76762983-76763002 None:intergenic 50.0%
GATGAAGCCGATGCAAGGAT+CGG - chr4_1:76763947-76763966 None:intergenic 50.0%
CTGATGTCTGTGCACAAGTG+TGG - chr4_1:76764445-76764464 None:intergenic 50.0%
CTTTGGTATTCCACCCTGCA+TGG - chr4_1:76764990-76765009 None:intergenic 50.0%
CAGGTTCTCCGTTTCAAGCA+TGG + chr4_1:76766051-76766070 Msa0573540:five_prime_UTR 50.0%
TCACCTGCCCATGCTTGAAA+CGG - chr4_1:76766062-76766081 None:intergenic 50.0%
GGTGTTTCGGTATTCCTTGG+CGG + chr4_1:76766172-76766191 Msa0573540:five_prime_UTR 50.0%
GCCAGCTTGGAAGATATCTC+TGG - chr4_1:76766259-76766278 None:intergenic 50.0%
! GAGCAAAGAGCGCATGAGAA+TGG + chr4_1:76766441-76766460 Msa0573540:CDS 50.0%
!! AGCGCATGAGAATGGATTGC+AGG + chr4_1:76766449-76766468 Msa0573540:CDS 50.0%
TGGATGAAAGGGATGGGTCA+TGG + chr4_1:76766649-76766668 Msa0573540:intron 50.0%
!! TTCAGATTCAAGGTGACGGG+CGG + chr4_1:76767446-76767465 Msa0573540:intron 50.0%
!! CTGTGCAGTTGATGGGGTAA+GGG - chr4_1:76767488-76767507 None:intergenic 50.0%
!! ACTGTGCAGTTGATGGGGTA+AGG - chr4_1:76767489-76767508 None:intergenic 50.0%
TACCCCATCAACTGCACAGT+TGG + chr4_1:76767489-76767508 Msa0573540:CDS 50.0%
! TGCCAACTGTGCAGTTGATG+GGG - chr4_1:76767494-76767513 None:intergenic 50.0%
GTGCCAACTGTGCAGTTGAT+GGG - chr4_1:76767495-76767514 None:intergenic 50.0%
AGTGCCAACTGTGCAGTTGA+TGG - chr4_1:76767496-76767515 None:intergenic 50.0%
CACCGTTTGTTCGAGTGGAT+TGG - chr4_1:76767612-76767631 None:intergenic 50.0%
CAATCCACTCGAACAAACGG+TGG + chr4_1:76767610-76767629 Msa0573540:CDS 50.0%
AAACGGTGGCAGAGAAGCAA+AGG + chr4_1:76767624-76767643 Msa0573540:CDS 50.0%
TTTAGCTGGAATTGCTGGCC+TGG + chr4_1:76767735-76767754 Msa0573540:CDS 50.0%
!! AATTGCTGGCCTGGCAGTTT+TGG + chr4_1:76767744-76767763 Msa0573540:CDS 50.0%
TTGTGGAGACATTCACGCAG+TGG + chr4_1:76767775-76767794 Msa0573540:CDS 50.0%
GAGTGGGAAGAGTTGGACTC+TGG + chr4_1:76756551-76756570 Msa0573540:five_prime_UTR 55.0%
! GAGGAGTTGGTTCATGTCGG+TGG - chr4_1:76756671-76756690 None:intergenic 55.0%
TGCAGCGAACGTAGTAGCGA+AGG - chr4_1:76756738-76756757 None:intergenic 55.0%
! GTTGGTTCCCGTTGACAAGC+CGG + chr4_1:76757137-76757156 Msa0573540:five_prime_UTR 55.0%
CAGGGGAAGCAGAAATGCCA+CGG + chr4_1:76757635-76757654 Msa0573540:five_prime_UTR 55.0%
AGGGGAAGCAGAAATGCCAC+GGG + chr4_1:76757636-76757655 Msa0573540:five_prime_UTR 55.0%
CCTCACGGTCTCAGGAGAAA+CGG - chr4_1:76757877-76757896 None:intergenic 55.0%
ATAGGTGGAGGATCAGGTGC+TGG - chr4_1:76758106-76758125 None:intergenic 55.0%
TCTCTGACATCAGCAGCGCA+CGG - chr4_1:76758723-76758742 None:intergenic 55.0%
TGAAGCAGAGGTGGGGAAGA+CGG - chr4_1:76760717-76760736 None:intergenic 55.0%
GATGATACAAGGCTGAGCGG+AGG - chr4_1:76761571-76761590 None:intergenic 55.0%
ACGCTCTCGAGACACTGTGA+CGG + chr4_1:76761919-76761938 Msa0573540:intron 55.0%
ACACTGTGACGGCAGCATCT+TGG + chr4_1:76761930-76761949 Msa0573540:intron 55.0%
CGGCAGCATCTTGGTTGCAT+TGG + chr4_1:76761939-76761958 Msa0573540:intron 55.0%
AAAACTTAGGGGACTGGGGG+AGG - chr4_1:76762014-76762033 None:intergenic 55.0%
! GGGATTGGCGAGGGCAAAAA+GGG - chr4_1:76762055-76762074 None:intergenic 55.0%
! CGGTCTAGAGGTTTAGGGCT+TGG + chr4_1:76762229-76762248 Msa0573540:intron 55.0%
TCAATGGGACCGACCATTGC+TGG + chr4_1:76762831-76762850 Msa0573540:five_prime_UTR 55.0%
CAATGGGACCGACCATTGCT+GGG + chr4_1:76762832-76762851 Msa0573540:five_prime_UTR 55.0%
AATGGGACCGACCATTGCTG+GGG + chr4_1:76762833-76762852 Msa0573540:five_prime_UTR 55.0%
CCGACCATTGCTGGGGAAAT+TGG + chr4_1:76762840-76762859 Msa0573540:five_prime_UTR 55.0%
GCTGGCAAGAGAGCTGAAGT+CGG + chr4_1:76762903-76762922 Msa0573540:five_prime_UTR 55.0%
GCTGAAGTCGGCACCAAGAT+TGG + chr4_1:76762915-76762934 Msa0573540:five_prime_UTR 55.0%
!! AGACCTGGAAACTGGCTTGC+AGG + chr4_1:76762977-76762996 Msa0573540:five_prime_UTR 55.0%
! GTCTGCTGCCTTTTGGCAAG+TGG - chr4_1:76764936-76764955 None:intergenic 55.0%
AGAAGTGGTCCGAAGTCCCA+TGG + chr4_1:76765790-76765809 Msa0573540:five_prime_UTR 55.0%
GTGCTTCCACCATGGGACTT+CGG - chr4_1:76765802-76765821 None:intergenic 55.0%
GTCCCATTCTTCAGCTCCAC+AGG - chr4_1:76765848-76765867 None:intergenic 55.0%
GGAGCTGAAGAATGGGACCA+TGG + chr4_1:76765850-76765869 Msa0573540:five_prime_UTR 55.0%
TCTCCGTTTCAAGCATGGGC+AGG + chr4_1:76766056-76766075 Msa0573540:five_prime_UTR 55.0%
ATGGAGGAGACTTGCCAGCT+TGG - chr4_1:76766272-76766291 None:intergenic 55.0%
TCTGCCACCGTTTGTTCGAG+TGG - chr4_1:76767617-76767636 None:intergenic 55.0%
!! CGGGTTGGTCAGAGAGGAGT+TGG - chr4_1:76756684-76756703 None:intergenic 60.0%
CTCCTCTCTGACCAACCCGT+CGG + chr4_1:76756685-76756704 Msa0573540:five_prime_UTR 60.0%
AGCGGCTCTCATGCGTGGTT+TGG - chr4_1:76756764-76756783 None:intergenic 60.0%
TCTGACGGCGAGTGCAAGAG+CGG - chr4_1:76756782-76756801 None:intergenic 60.0%
CTTGCACTCGCCGTCAGAGT+CGG + chr4_1:76756784-76756803 Msa0573540:five_prime_UTR 60.0%
TTGCACTCGCCGTCAGAGTC+GGG + chr4_1:76756785-76756804 Msa0573540:five_prime_UTR 60.0%
GGGGAAGCAGAAATGCCACG+GGG + chr4_1:76757637-76757656 Msa0573540:five_prime_UTR 60.0%
GAAGCAGAAATGCCACGGGG+AGG + chr4_1:76757640-76757659 Msa0573540:five_prime_UTR 60.0%
GGAGGCTGCAGGATGCTCAT+TGG + chr4_1:76757658-76757677 Msa0573540:five_prime_UTR 60.0%
CCGTTTCTCCTGAGACCGTG+AGG + chr4_1:76757874-76757893 Msa0573540:five_prime_UTR 60.0%
GTTGCTAGGGTGCGGCTTCA+TGG + chr4_1:76758670-76758689 Msa0573540:five_prime_UTR 60.0%
GGCAAATGTTCGGGGCTCCA+TGG - chr4_1:76759140-76759159 None:intergenic 60.0%
CTCGGAGACTTCACCGTTGC+CGG + chr4_1:76761222-76761241 Msa0573540:intron 60.0%
CTCGGAGACTTCACCGTTGC+CGG + chr4_1:76761222-76761241 Msa0573540:intron 60.0%
TCGGAGACTTCACCGTTGCC+GGG + chr4_1:76761223-76761242 Msa0573540:intron 60.0%
GACTTCACCGTTGCCGGGAA+CGG + chr4_1:76761531-76761550 Msa0573540:intron 60.0%
GGTGTAACCGTTCCCGGCAA+CGG - chr4_1:76761541-76761560 None:intergenic 60.0%
! GGTGAGGGTGTAACCGTTCC+CGG - chr4_1:76761547-76761566 None:intergenic 60.0%
GATACAAGGCTGAGCGGAGG+TGG - chr4_1:76761568-76761587 None:intergenic 60.0%
! GGGGATTGGCGAGGGCAAAA+AGG - chr4_1:76762056-76762075 None:intergenic 60.0%
AGTGGTCCGAAGTCCCATGG+TGG + chr4_1:76765793-76765812 Msa0573540:five_prime_UTR 60.0%
!! CAACCCGTCGGCGTCGACTT+CGG + chr4_1:76756697-76756716 Msa0573540:five_prime_UTR 65.0%
! AGTGCCGAAGTCGACGCCGA+CGG - chr4_1:76756704-76756723 None:intergenic 65.0%
GCAAGAGCGGCTCTCATGCG+TGG - chr4_1:76756769-76756788 None:intergenic 65.0%
AAATGCCACGGGGAGGCTGC+AGG + chr4_1:76757647-76757666 Msa0573540:five_prime_UTR 65.0%
CGGCAACGGTGAAGTCTCCG+AGG - chr4_1:76761224-76761243 None:intergenic 65.0%
CGGCAACGGTGAAGTCTCCG+AGG - chr4_1:76761224-76761243 None:intergenic 65.0%
AGGCTGAGCGGAGGTGGTGA+GGG - chr4_1:76761562-76761581 None:intergenic 65.0%
AAGGCTGAGCGGAGGTGGTG+AGG - chr4_1:76761563-76761582 None:intergenic 65.0%
GGGACTGGGGGAGGAAGAAC+GGG - chr4_1:76762005-76762024 None:intergenic 65.0%
GGGGACTGGGGGAGGAAGAA+CGG - chr4_1:76762006-76762025 None:intergenic 65.0%
CCGCTCATCGGACCGCTCAT+CGG - chr4_1:76762671-76762690 None:intergenic 65.0%
CCGATGAGCGGTCCGATGAG+CGG + chr4_1:76762668-76762687 Msa0573540:intron 65.0%
!! CGCCGACGGGTTGGTCAGAG+AGG - chr4_1:76756690-76756709 None:intergenic 70.0%
CGAAGTCGACGCCGACGGGT+TGG - chr4_1:76756699-76756718 None:intergenic 70.0%
GTGCCGAAGTCGACGCCGAC+GGG - chr4_1:76756703-76756722 None:intergenic 70.0%
AGCATCCTGCAGCCTCCCCG+TGG - chr4_1:76757655-76757674 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 76756499 76768409 76756499 ID=Msa0573540;Name=Msa0573540
chr4_1 mRNA 76756499 76768409 76756499 ID=Msa0573540-mRNA-1;Parent=Msa0573540;Name=Msa0573540-mRNA-1;_AED=0.10;_eAED=0.10;_QI=2711|1|1|1|1|0.95|20|569|176
chr4_1 exon 76756499 76756806 76756499 ID=Msa0573540-mRNA-1:exon:26876;Parent=Msa0573540-mRNA-1
chr4_1 exon 76756960 76757206 76756960 ID=Msa0573540-mRNA-1:exon:26877;Parent=Msa0573540-mRNA-1
chr4_1 exon 76757579 76757704 76757579 ID=Msa0573540-mRNA-1:exon:26878;Parent=Msa0573540-mRNA-1
chr4_1 exon 76757831 76757968 76757831 ID=Msa0573540-mRNA-1:exon:26879;Parent=Msa0573540-mRNA-1
chr4_1 exon 76758061 76758195 76758061 ID=Msa0573540-mRNA-1:exon:26880;Parent=Msa0573540-mRNA-1
chr4_1 exon 76758304 76758561 76758304 ID=Msa0573540-mRNA-1:exon:26881;Parent=Msa0573540-mRNA-1
chr4_1 exon 76758670 76758807 76758670 ID=Msa0573540-mRNA-1:exon:26882;Parent=Msa0573540-mRNA-1
chr4_1 exon 76758893 76758962 76758893 ID=Msa0573540-mRNA-1:exon:26883;Parent=Msa0573540-mRNA-1
chr4_1 exon 76759068 76759281 76759068 ID=Msa0573540-mRNA-1:exon:26884;Parent=Msa0573540-mRNA-1
chr4_1 exon 76759983 76760088 76759983 ID=Msa0573540-mRNA-1:exon:26885;Parent=Msa0573540-mRNA-1
chr4_1 exon 76762765 76762998 76762765 ID=Msa0573540-mRNA-1:exon:26886;Parent=Msa0573540-mRNA-1
chr4_1 exon 76764527 76764691 76764527 ID=Msa0573540-mRNA-1:exon:26887;Parent=Msa0573540-mRNA-1
chr4_1 exon 76764771 76764920 76764771 ID=Msa0573540-mRNA-1:exon:26888;Parent=Msa0573540-mRNA-1
chr4_1 exon 76764995 76765086 76764995 ID=Msa0573540-mRNA-1:exon:26889;Parent=Msa0573540-mRNA-1
chr4_1 exon 76765790 76765871 76765790 ID=Msa0573540-mRNA-1:exon:26890;Parent=Msa0573540-mRNA-1
chr4_1 exon 76765994 76766077 76765994 ID=Msa0573540-mRNA-1:exon:26891;Parent=Msa0573540-mRNA-1
chr4_1 exon 76766160 76766470 76766160 ID=Msa0573540-mRNA-1:exon:26892;Parent=Msa0573540-mRNA-1
chr4_1 exon 76766723 76766803 76766723 ID=Msa0573540-mRNA-1:exon:26893;Parent=Msa0573540-mRNA-1
chr4_1 exon 76767451 76767645 76767451 ID=Msa0573540-mRNA-1:exon:26894;Parent=Msa0573540-mRNA-1
chr4_1 exon 76767733 76768409 76767733 ID=Msa0573540-mRNA-1:exon:26895;Parent=Msa0573540-mRNA-1
chr4_1 five_prime_UTR 76756499 76756806 76756499 ID=Msa0573540-mRNA-1:five_prime_utr;Parent=Msa0573540-mRNA-1
chr4_1 five_prime_UTR 76756960 76757206 76756960 ID=Msa0573540-mRNA-1:five_prime_utr;Parent=Msa0573540-mRNA-1
chr4_1 five_prime_UTR 76757579 76757704 76757579 ID=Msa0573540-mRNA-1:five_prime_utr;Parent=Msa0573540-mRNA-1
chr4_1 five_prime_UTR 76757831 76757968 76757831 ID=Msa0573540-mRNA-1:five_prime_utr;Parent=Msa0573540-mRNA-1
chr4_1 five_prime_UTR 76758061 76758195 76758061 ID=Msa0573540-mRNA-1:five_prime_utr;Parent=Msa0573540-mRNA-1
chr4_1 five_prime_UTR 76758304 76758561 76758304 ID=Msa0573540-mRNA-1:five_prime_utr;Parent=Msa0573540-mRNA-1
chr4_1 five_prime_UTR 76758670 76758807 76758670 ID=Msa0573540-mRNA-1:five_prime_utr;Parent=Msa0573540-mRNA-1
chr4_1 five_prime_UTR 76758893 76758962 76758893 ID=Msa0573540-mRNA-1:five_prime_utr;Parent=Msa0573540-mRNA-1
chr4_1 five_prime_UTR 76759068 76759281 76759068 ID=Msa0573540-mRNA-1:five_prime_utr;Parent=Msa0573540-mRNA-1
chr4_1 five_prime_UTR 76759983 76760088 76759983 ID=Msa0573540-mRNA-1:five_prime_utr;Parent=Msa0573540-mRNA-1
chr4_1 five_prime_UTR 76762765 76762998 76762765 ID=Msa0573540-mRNA-1:five_prime_utr;Parent=Msa0573540-mRNA-1
chr4_1 five_prime_UTR 76764527 76764691 76764527 ID=Msa0573540-mRNA-1:five_prime_utr;Parent=Msa0573540-mRNA-1
chr4_1 five_prime_UTR 76764771 76764920 76764771 ID=Msa0573540-mRNA-1:five_prime_utr;Parent=Msa0573540-mRNA-1
chr4_1 five_prime_UTR 76764995 76765086 76764995 ID=Msa0573540-mRNA-1:five_prime_utr;Parent=Msa0573540-mRNA-1
chr4_1 five_prime_UTR 76765790 76765871 76765790 ID=Msa0573540-mRNA-1:five_prime_utr;Parent=Msa0573540-mRNA-1
chr4_1 five_prime_UTR 76765994 76766077 76765994 ID=Msa0573540-mRNA-1:five_prime_utr;Parent=Msa0573540-mRNA-1
chr4_1 five_prime_UTR 76766160 76766323 76766160 ID=Msa0573540-mRNA-1:five_prime_utr;Parent=Msa0573540-mRNA-1
chr4_1 CDS 76766324 76766470 76766324 ID=Msa0573540-mRNA-1:cds;Parent=Msa0573540-mRNA-1
chr4_1 CDS 76766723 76766803 76766723 ID=Msa0573540-mRNA-1:cds;Parent=Msa0573540-mRNA-1
chr4_1 CDS 76767451 76767645 76767451 ID=Msa0573540-mRNA-1:cds;Parent=Msa0573540-mRNA-1
chr4_1 CDS 76767733 76767840 76767733 ID=Msa0573540-mRNA-1:cds;Parent=Msa0573540-mRNA-1
chr4_1 three_prime_UTR 76767841 76768409 76767841 ID=Msa0573540-mRNA-1:three_prime_utr;Parent=Msa0573540-mRNA-1
Gene Sequence

>Msa0573540

ATGGTGAAAAATTACTGTCTTGTAAATCATTTACAGGTTGATATTGCTTTGGATGAAATGTTGCGTCTTCAAGATGAAGGACCTACAGAACAGGATGTTTCAACCGTACTGGAAATTGAGCAAAGAGCGCATGAGAATGGATTGCAGGAAAATTATTACTGGCTGGACCGGATTTTACATAGCTACCAATCAAGAGTCTATTCTGGTGATGTTGGCACTTCTTTTGAGATTCAAGGTGACGGGCGGTCAAAAGTCAGATCATCCCTTACCCCATCAACTGCACAGTTGGCACTACAAAGAATATTGCCTTATCCTTGTAAAAAACAGTATACCGCAGTGATACTTATGCCCAAGTCTTCTCCTTTTAAATTCCTGAAATCAGTATTCCAATCCACTCGAACAAACGGTGGCAGAGAAGCAAAGATTTTAGCTGGAATTGCTGGCCTGGCAGTTTTGGCTCTTAGTTTGTGGAGACATTCACGCAGTGGCCATATTAATAACAGACATTTACTTGGCAGTGCTACGAAGTAG
Protein sequence

>Msa0573540

MVKNYCLVNHLQVDIALDEMLRLQDEGPTEQDVSTVLEIEQRAHENGLQENYYWLDRILHSYQSRVYSGDVGTSFEIQGDGRSKVRSSLTPSTAQLALQRILPYPCKKQYTAVILMPKSSPFKFLKSVFQSTRTNGGREAKILAGIAGLAVLALSLWRHSRSGHINNRHLLGSATK*