AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0929690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0929690 MtrunA17_Chr8g0389421 98.171 164 3 0 13 176 857 1020 8.73e-110 335
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0929690 AT5G56730.1 64.901 151 50 2 13 161 858 1007 2.19e-63 210

Find 281 sgRNAs with CRISPR-Local

Find 785 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTGACTTCAAAACCAAATA+TGG 0.182334 6_2:-78504634 Msa0929690:five_prime_UTR
CAAGAGAAATACTCGCTTTC+TGG 0.202305 6_2:+78500802 None:intergenic
CTTTGAACTCACCCCATATT+TGG 0.221929 6_2:+78504621 None:intergenic
AGAGATTGAATCTGCCTATT+TGG 0.223259 6_2:-78505154 Msa0929690:five_prime_UTR
CTGTCTTGTAAATCATTTAC+AGG 0.233962 6_2:-78497276 Msa0929690:CDS
CACTAGGTACTGCAATATTA+AGG 0.236301 6_2:+78498713 None:intergenic
ACTGATTTCAGGAATTTAAA+AGG 0.239098 6_2:+78496031 None:intergenic
AATTGCTGGCCTGGCAGTTT+TGG 0.239834 6_2:-78495870 Msa0929690:CDS
AGAAGCTGAACATGAGAAAT+AGG 0.241964 6_2:+78505449 None:intergenic
GTTATAATATTGGTCTTTAC+TGG 0.244590 6_2:+78505408 None:intergenic
TTACAAAATCAACTGGAAAA+TGG 0.251382 6_2:-78495557 Msa0929690:three_prime_UTR
GTTGCTAGGGTGCGGCTTCA+TGG 0.261905 6_2:-78505222 Msa0929690:five_prime_UTR
CCGACCATTGCTGGGGAAAT+TGG 0.270674 6_2:-78500769 Msa0929690:five_prime_UTR
TGACAGCCATATTGCATAAA+TGG 0.280422 6_2:+78505975 None:intergenic
GAAAGTATCGGAGCTGAATT+TGG 0.281086 6_2:-78506838 Msa0929690:five_prime_UTR
TGTCTACCAAAACTACTAAT+TGG 0.289883 6_2:+78495487 None:intergenic
TGGATTGGAATACTGATTTC+AGG 0.302110 6_2:+78496020 None:intergenic
GTAAATGTCTGTTATTAATA+TGG 0.303921 6_2:+78495816 None:intergenic
TCACGGTTAAAATGCATAAT+AGG 0.305372 6_2:+78498595 None:intergenic
TCACAATTTCTTCAGGAATA+TGG 0.308219 6_2:+78504652 None:intergenic
TCTTTCAGGAAAATTATTAC+TGG 0.319442 6_2:-78496899 Msa0929690:intron
TGCAACTTTACAAAATCAAC+TGG 0.322432 6_2:-78495564 Msa0929690:three_prime_UTR
TGGGTTCTTAAGCAAGCTTC+TGG 0.324282 6_2:-78497600 Msa0929690:five_prime_UTR
TCCCAACAACAGGTTCATTA+TGG 0.325895 6_2:+78504991 None:intergenic
TTTGAAGTCACAATTTCTTC+AGG 0.328204 6_2:+78504645 None:intergenic
ATCTTCACCGGTTATTCATA+TGG 0.328978 6_2:-78500841 Msa0929690:five_prime_UTR
CTCAGATATATCAGCATTAG+AGG 0.345258 6_2:-78504829 Msa0929690:intron
CTATCACCAATTAGTAGTTT+TGG 0.351064 6_2:-78495493 Msa0929690:three_prime_UTR
GAGTTGATAAAGGTTCATTT+TGG 0.354052 6_2:-78505822 Msa0929690:five_prime_UTR
ATTGTTGTCTCAGGCGATTT+CGG 0.356635 6_2:-78506743 Msa0929690:five_prime_UTR
TCAATGGGACCGACCATTGC+TGG 0.361839 6_2:-78500778 Msa0929690:five_prime_UTR
TACAATATTGTATTTGAGTC+TGG 0.366595 6_2:-78495528 Msa0929690:three_prime_UTR
ACATGATGAAGTTATAATAT+TGG 0.369371 6_2:+78505398 None:intergenic
CTAAATATTCTGAGAAATTA+CGG 0.372204 6_2:-78504803 Msa0929690:five_prime_UTR
TCCACCTATTCCAACATTCC+AGG 0.372222 6_2:-78505775 Msa0929690:five_prime_UTR
AAGTTTGCTTATATTACATA+TGG 0.372441 6_2:+78497326 None:intergenic
GCTGGGGAAATTGGTGTGTT+TGG 0.372812 6_2:-78500760 Msa0929690:five_prime_UTR
TAGAAGAGATTCACTTTGTT+GGG 0.373154 6_2:-78497619 Msa0929690:five_prime_UTR
CCTCTGTTAACATTGATTCC+AGG 0.373957 6_2:+78505352 None:intergenic
TCACCTTCAGACCTGGAAAC+TGG 0.376898 6_2:-78500640 Msa0929690:five_prime_UTR
ATCAAACACGGCAAATGTTC+GGG 0.378987 6_2:+78504746 None:intergenic
ATTATCCTGTTTCAGATTCA+AGG 0.381663 6_2:-78496178 Msa0929690:intron
TTTGTTGAATCTGAAGCTGC+TGG 0.382487 6_2:-78505720 Msa0929690:five_prime_UTR
AAGCAGTCTGTGCTCAAGAT+AGG 0.383157 6_2:-78499011 Msa0929690:five_prime_UTR
GAGTGTAGTTGAGTTGATAA+AGG 0.384364 6_2:-78505832 Msa0929690:five_prime_UTR
AGACCTGGAAACTGGCTTGC+AGG 0.384413 6_2:-78500632 Msa0929690:intron
TTTGACTTAGAAGGCAAGTT+AGG 0.384549 6_2:-78495682 Msa0929690:three_prime_UTR
ATGGTACCATTTATGCAATA+TGG 0.389252 6_2:-78505981 Msa0929690:five_prime_UTR
GAGTATTTCTCTTGCTCAAT+GGG 0.390747 6_2:-78500793 Msa0929690:five_prime_UTR
AACAATTCCGGCTTGTCAAC+GGG 0.391308 6_2:+78506760 None:intergenic
TTTACAGGTTGATATTGCTT+TGG 0.391872 6_2:-78497261 Msa0929690:CDS
TTTCATTTCAATCTCTTAGT+GGG 0.392703 6_2:+78495642 None:intergenic
ATACCTGCAAGCCAGTTTCC+AGG 0.394718 6_2:+78500629 None:intergenic
AGCGGCTCTCATGCGTGGTT+TGG 0.396887 6_2:+78507141 None:intergenic
TACAGACTTCCTTGATGATC+AGG 0.397550 6_2:-78503825 Msa0929690:intron
TCTTCACCGGTTATTCATAT+GGG 0.398554 6_2:-78500840 Msa0929690:five_prime_UTR
AAGGCATGTTGTGAAGGAAT+TGG 0.398678 6_2:-78503912 Msa0929690:five_prime_UTR
TTATAGACCATCTGTCCTAA+TGG 0.403308 6_2:-78500737 Msa0929690:five_prime_UTR
CGTGTAAAGGAGCTTAATTA+TGG 0.404084 6_2:-78498964 Msa0929690:five_prime_UTR
GTCCTAATGGATATGCTTGC+TGG 0.407215 6_2:-78500724 Msa0929690:five_prime_UTR
CTTGCACTCGCCGTCAGAGT+CGG 0.407597 6_2:-78507118 Msa0929690:five_prime_UTR
TACCAATCAAGAGTCTATTC+TGG 0.407973 6_2:-78496855 Msa0929690:CDS
CTCCATAATGAACCTGTTGT+TGG 0.408200 6_2:-78504993 Msa0929690:five_prime_UTR
CACCGTTTGTTCGAGTGGAT+TGG 0.408963 6_2:+78496005 None:intergenic
ACTGAACTTATTCTGTCAAA+TGG 0.412439 6_2:-78503869 Msa0929690:five_prime_UTR
GGATCTCTGTGCCATTTGTT+TGG 0.413745 6_2:-78495419 Msa0929690:three_prime_UTR
CATCAAACACGGCAAATGTT+CGG 0.415336 6_2:+78504745 None:intergenic
GTAGGTGTTTCGGTATTCCT+TGG 0.418428 6_2:-78497445 Msa0929690:five_prime_UTR
GTGACTTCAAAACCAAATAT+GGG 0.421073 6_2:-78504633 Msa0929690:five_prime_UTR
TCCATAATGAACCTGTTGTT+GGG 0.422638 6_2:-78504992 Msa0929690:five_prime_UTR
CGGTTTGTAAAAGCAGTATA+GGG 0.422820 6_2:+78498985 None:intergenic
AGCGCATGAGAATGGATTGC+AGG 0.426028 6_2:-78497165 Msa0929690:intron
CGAGTATTTCTCTTGCTCAA+TGG 0.427411 6_2:-78500794 Msa0929690:five_prime_UTR
AACTTGATCTCGCTCCAAAT+AGG 0.429517 6_2:+78505140 None:intergenic
GTAGAAGAGATTCACTTTGT+TGG 0.430584 6_2:-78497620 Msa0929690:five_prime_UTR
ATAATAGGTTCAGGAGGCTT+TGG 0.430679 6_2:+78498610 None:intergenic
GCTGAAGTCGGCACCAAGAT+TGG 0.433512 6_2:-78500694 Msa0929690:five_prime_UTR
ACGGTTTGTAAAAGCAGTAT+AGG 0.434820 6_2:+78498984 None:intergenic
GGAGGCTGCAGGATGCTCAT+TGG 0.435034 6_2:-78506233 Msa0929690:five_prime_UTR
ATCACTTTCTCGAGTCCAAT+TGG 0.436300 6_2:+78506046 None:intergenic
TGCTCATTGGACTCTGTTGA+TGG 0.437075 6_2:-78506220 Msa0929690:five_prime_UTR
AGAGTGAGAGTGAAGAAGAA+TGG 0.441914 6_2:-78507326 Msa0929690:five_prime_UTR
ATCGCCTGAGACAACAATTC+CGG 0.442458 6_2:+78506748 None:intergenic
GGTAATAAACCCTCAAGAAC+CGG 0.442867 6_2:-78497421 Msa0929690:five_prime_UTR
GATATACTCTGTAGGTGTTT+CGG 0.443859 6_2:-78497455 Msa0929690:five_prime_UTR
TTAAAATGCATAATAGGTTC+AGG 0.444139 6_2:+78498601 None:intergenic
AAAATTATTACTGGCTGGAC+CGG 0.447092 6_2:-78496890 Msa0929690:CDS
TCTCATATATGCACCAATCT+TGG 0.447471 6_2:+78500681 None:intergenic
AAATGCCACGGGGAGGCTGC+AGG 0.452143 6_2:-78506244 Msa0929690:five_prime_UTR
CATGGTGGAAGCACAATGTT+TGG 0.452540 6_2:-78497806 Msa0929690:five_prime_UTR
ATCTGTAAGAAGGGGATATG+TGG 0.453887 6_2:-78495383 Msa0929690:three_prime_UTR
GTTGGAATAGGTGGAGGATC+AGG 0.461797 6_2:+78505783 None:intergenic
TCAGGAAAATTATTACTGGC+TGG 0.463767 6_2:-78496895 Msa0929690:intron
ACTTCATCATGTAGAGGAAA+AGG 0.464090 6_2:-78505387 Msa0929690:five_prime_UTR
GAGCTGTCATGGAAGAGTAC+AGG 0.466656 6_2:-78506275 Msa0929690:five_prime_UTR
GTCCCATTCTTCAGCTCCAC+AGG 0.468016 6_2:+78497769 None:intergenic
CTGAACTTATTCTGTCAAAT+GGG 0.468430 6_2:-78503868 Msa0929690:five_prime_UTR
TTGCACTCGCCGTCAGAGTC+GGG 0.469577 6_2:-78507117 Msa0929690:intron
TAGTATAGATTGATTTGCGC+TGG 0.470399 6_2:-78495613 Msa0929690:three_prime_UTR
GTTTCATTTCAATCTCTTAG+TGG 0.472348 6_2:+78495641 None:intergenic
GCCAGCTTGGAAGATATCTC+TGG 0.472566 6_2:+78497358 None:intergenic
ACTAGGTACTGCAATATTAA+GGG 0.473108 6_2:+78498714 None:intergenic
AGTGCCAACTGTGCAGTTGA+TGG 0.474818 6_2:+78496121 None:intergenic
TCTGCCACCGTTTGTTCGAG+TGG 0.475330 6_2:+78496000 None:intergenic
TCTTCTATTTATCTGTAAGA+AGG 0.475984 6_2:-78495393 Msa0929690:three_prime_UTR
CAACCCGTCGGCGTCGACTT+CGG 0.477435 6_2:-78507205 Msa0929690:five_prime_UTR
AAAAGGAACTCTTGAAGCCC+TGG 0.477760 6_2:-78505370 Msa0929690:five_prime_UTR
GAAAGAAAGAGGAGCTGTCA+TGG 0.477993 6_2:-78506286 Msa0929690:five_prime_UTR
AAGCCTTGTTTCCTTGAGAT+CGG 0.478729 6_2:+78507277 None:intergenic
CTCTGTTAACATTGATTCCA+GGG 0.479060 6_2:+78505353 None:intergenic
GAATTGGAATACTCAAACAT+TGG 0.479944 6_2:-78503896 Msa0929690:five_prime_UTR
TGATACTGTTTATGAGCTGT+TGG 0.485159 6_2:-78506785 Msa0929690:five_prime_UTR
CTTCTATTTATCTGTAAGAA+GGG 0.485620 6_2:-78495392 Msa0929690:three_prime_UTR
ATTAATAACAGACATTTACT+TGG 0.487157 6_2:-78495812 Msa0929690:CDS
GAGCAAAGAGCGCATGAGAA+TGG 0.488726 6_2:-78497173 Msa0929690:CDS
CCTACAAAAGGTTGATCCTC+TGG 0.489250 6_2:-78498826 Msa0929690:five_prime_UTR
GTTAAGTTTCTTGAAAGTAT+CGG 0.489598 6_2:-78506850 Msa0929690:five_prime_UTR
ACTGTGCAGTTGATGGGGTA+AGG 0.490054 6_2:+78496128 None:intergenic
CAAGCCGGAATTGTTGTCTC+AGG 0.490415 6_2:-78506752 Msa0929690:five_prime_UTR
TCACAACAGGTTATCTTCAC+CGG 0.490426 6_2:-78500853 Msa0929690:intron
TTTCCTGTGGAGCTGAAGAA+TGG 0.491550 6_2:-78497772 Msa0929690:five_prime_UTR
GCACTCTTATTATTCTGTGC+AGG 0.491564 6_2:+78495459 None:intergenic
TTGTTGAATCTGAAGCTGCT+GGG 0.492445 6_2:-78505719 Msa0929690:five_prime_UTR
TTCCTGTGGAGCTGAAGAAT+GGG 0.492629 6_2:-78497771 Msa0929690:five_prime_UTR
CACGTGGTAGAAGAGTCTTT+TGG 0.493588 6_2:+78504949 None:intergenic
CTTCACCGGTTATTCATATG+GGG 0.493880 6_2:-78500839 Msa0929690:five_prime_UTR
GAAGCTGAACATGAGAAATA+GGG 0.494090 6_2:+78505450 None:intergenic
ATAGAAGAACACCAAACAAA+TGG 0.494621 6_2:+78495408 None:intergenic
CGGGTTGGTCAGAGAGGAGT+TGG 0.494655 6_2:+78507221 None:intergenic
AGTCAATCTTCTTGAGGAAG+AGG 0.498368 6_2:-78504700 Msa0929690:five_prime_UTR
ATCGGAGTTGCTGCTTCTGA+TGG 0.499100 6_2:+78507295 None:intergenic
CAGGTTCTCCGTTTCAAGCA+TGG 0.503187 6_2:-78497563 Msa0929690:five_prime_UTR
ACCTGGAATGTTGGAATAGG+TGG 0.504632 6_2:+78505774 None:intergenic
TCATACACAATCCCAACAAC+AGG 0.504658 6_2:+78504981 None:intergenic
CTAAATAAGGCATGTTGTGA+AGG 0.505653 6_2:-78503918 Msa0929690:intron
TGCCAGCAAGCATATCCATT+AGG 0.506245 6_2:+78500722 None:intergenic
GAGATAAAGAATCACACTGC+TGG 0.506361 6_2:+78495766 None:intergenic
ATTAAGGGAAGTGCAATAGT+AGG 0.507692 6_2:+78498729 None:intergenic
CGAACAATACCGGTTCTTGA+GGG 0.508244 6_2:+78497412 None:intergenic
ATTCTTTGATTGTAGAGAAG+TGG 0.508477 6_2:-78497839 Msa0929690:intron
AGTTAGGTGTTAGTTGTATG+TGG 0.508600 6_2:-78495666 Msa0929690:three_prime_UTR
ACAGGATGTTTCAACCGTAC+TGG 0.509291 6_2:-78497201 Msa0929690:CDS
TGTTTCAGATTCAAGGTGAC+GGG 0.509310 6_2:-78496171 Msa0929690:intron
GTTGGTTCCCGTTGACAAGC+CGG 0.509570 6_2:-78506767 Msa0929690:five_prime_UTR
CAATGGGACCGACCATTGCT+GGG 0.510124 6_2:-78500777 Msa0929690:five_prime_UTR
TTCCAATCCACTCGAACAAA+CGG 0.510204 6_2:-78496007 Msa0929690:CDS
TATGCTGAAAGGTTACCAAT+TGG 0.511296 6_2:-78506061 Msa0929690:five_prime_UTR
ATTGGTAGCTATGTAAAATC+CGG 0.513907 6_2:+78496871 None:intergenic
ATGGAGGAGACTTGCCAGCT+TGG 0.514065 6_2:+78497345 None:intergenic
AGATGAAGGACCTACAGAAC+AGG 0.519896 6_2:-78497219 Msa0929690:CDS
TCTGTAAGAAGGGGATATGT+GGG 0.520960 6_2:-78495382 Msa0929690:three_prime_UTR
CACCAGAATAGACTCTTGAT+TGG 0.521577 6_2:+78496853 None:intergenic
AGCATATCCATTAGGACAGA+TGG 0.525339 6_2:+78500730 None:intergenic
GGCAAATGTTCGGGGCTCCA+TGG 0.525394 6_2:+78504755 None:intergenic
TACCCCATCAACTGCACAGT+TGG 0.526709 6_2:-78496125 Msa0929690:CDS
GTGCCAACTGTGCAGTTGAT+GGG 0.527009 6_2:+78496122 None:intergenic
AAACATTGTGCTTCCACCAT+GGG 0.528145 6_2:+78497808 None:intergenic
TTTGCTTATATTACATATGG+AGG 0.528215 6_2:+78497329 None:intergenic
GGTGTTTCGGTATTCCTTGG+CGG 0.529926 6_2:-78497442 Msa0929690:five_prime_UTR
AACTAAGAGCCAAAACTGCC+AGG 0.530084 6_2:+78495861 None:intergenic
TCTTTGCTCAATTTCCAGTA+CGG 0.530327 6_2:+78497187 None:intergenic
AGGTTCTCCGTTTCAAGCAT+GGG 0.531224 6_2:-78497562 Msa0929690:five_prime_UTR
CATAATTAAGCTCCTTTACA+CGG 0.532305 6_2:+78498965 None:intergenic
GAATTTAAAAGGAGAAGACT+TGG 0.533783 6_2:+78496042 None:intergenic
CATTGGACTCTGTTGATGGA+AGG 0.534418 6_2:-78506216 Msa0929690:five_prime_UTR
GTGCTCTTGATTCTTGATGC+GGG 0.534686 6_2:-78495440 Msa0929690:three_prime_UTR
CAACAATTCCGGCTTGTCAA+CGG 0.535577 6_2:+78506759 None:intergenic
TCACCTGCCCATGCTTGAAA+CGG 0.535705 6_2:+78497555 None:intergenic
TCTCCGTTTCAAGCATGGGC+AGG 0.535920 6_2:-78497558 Msa0929690:intron
GGTACAGATATGCTTTCCTG+TGG 0.536610 6_2:-78497785 Msa0929690:five_prime_UTR
GGTCATCATGTGATGGAACC+TGG 0.536900 6_2:+78505757 None:intergenic
GGAACCTGGAATGTTGGAAT+AGG 0.537128 6_2:+78505771 None:intergenic
TTTAGCTGGAATTGCTGGCC+TGG 0.538396 6_2:-78495879 Msa0929690:CDS
AGACACAGAGTGGGAAGTGT+TGG 0.538609 6_2:-78507358 Msa0929690:five_prime_UTR
TCTGTTGATGGAAGGTTCAA+AGG 0.539469 6_2:-78506208 Msa0929690:intron
TCAAGAACCGGTATTGTTCG+TGG 0.539580 6_2:-78497409 Msa0929690:five_prime_UTR
AGAGTCTATTCTGGTGATGT+TGG 0.539916 6_2:-78496846 Msa0929690:CDS
TCGAGTATCGAAAGATGACT+TGG 0.542562 6_2:-78506310 Msa0929690:five_prime_UTR
CGAAGTCGACGCCGACGGGT+TGG 0.542868 6_2:+78507206 None:intergenic
AGCAGTCTGTGCTCAAGATA+GGG 0.543777 6_2:-78499010 Msa0929690:five_prime_UTR
GTGCTTCCACCATGGGACTT+CGG 0.546255 6_2:+78497815 None:intergenic
TAAGAAAGTCAATCTTCTTG+AGG 0.547713 6_2:-78504706 Msa0929690:five_prime_UTR
ACGAACAATACCGGTTCTTG+AGG 0.548426 6_2:+78497411 None:intergenic
TATGTCTCCACGAACAATAC+CGG 0.550388 6_2:+78497402 None:intergenic
TGACTGTTCACCTTCAGACC+TGG 0.550400 6_2:-78500647 Msa0929690:five_prime_UTR
AGCTGTCATGGAAGAGTACA+GGG 0.550451 6_2:-78506274 Msa0929690:five_prime_UTR
ATCTCTGGTTTAATGCATAG+AGG 0.550760 6_2:+78505502 None:intergenic
AGAGGGTAAAATTTCTTCGT+GGG 0.551146 6_2:-78504682 Msa0929690:five_prime_UTR
AAGCAGCAACTCCGATCTCA+AGG 0.551701 6_2:-78507288 Msa0929690:five_prime_UTR
AAATACTAACCCGACTCTGA+CGG 0.552340 6_2:+78507108 None:intergenic
TAATATTGGTCTTTACTGGA+CGG 0.553231 6_2:+78505412 None:intergenic
GTGCCGAAGTCGACGCCGAC+GGG 0.554379 6_2:+78507202 None:intergenic
ATAGGTGGAGGATCAGGTGC+TGG 0.554537 6_2:+78505789 None:intergenic
CCTCACGGTCTCAGGAGAAA+CGG 0.555379 6_2:+78506018 None:intergenic
TGGAAACAAGTTTCAATGAT+CGG 0.560280 6_2:+78507254 None:intergenic
TGTCAAAATAGTGATGCAAA+TGG 0.560872 6_2:-78499040 Msa0929690:five_prime_UTR
TGTGATGGAACCTGGAATGT+TGG 0.561702 6_2:+78505765 None:intergenic
TTGGACTCGAGAAAGTGATT+CGG 0.562710 6_2:-78506042 Msa0929690:five_prime_UTR
TCCAGAGATATCTTCCAAGC+TGG 0.564354 6_2:-78497359 Msa0929690:five_prime_UTR
GAATCAAAACCTGATCATCA+AGG 0.564712 6_2:+78503816 None:intergenic
TTCTATTTATCTGTAAGAAG+GGG 0.569221 6_2:-78495391 Msa0929690:three_prime_UTR
AAGAGGGTAAAATTTCTTCG+TGG 0.569335 6_2:-78504683 Msa0929690:five_prime_UTR
CAAACATTGTGCTTCCACCA+TGG 0.569894 6_2:+78497807 None:intergenic
TGTTGAATCTGAAGCTGCTG+GGG 0.571772 6_2:-78505718 Msa0929690:intron
TTGAGGGTTTATTACCGCCA+AGG 0.572207 6_2:+78497428 None:intergenic
ATTGGTTGCAGTATGCTGAA+AGG 0.572229 6_2:-78506072 Msa0929690:intron
AAGCCAGTTTCCAGGTCTGA+AGG 0.573250 6_2:+78500637 None:intergenic
AATAGGGTGGATCCTTCCTA+CGG 0.573344 6_2:+78505466 None:intergenic
CTGTTTCAGATTCAAGGTGA+CGG 0.573723 6_2:-78496172 Msa0929690:intron
AAACGGTGGCAGAGAAGCAA+AGG 0.577125 6_2:-78495990 Msa0929690:intron
GAGGAGTTGGTTCATGTCGG+TGG 0.577148 6_2:+78507234 None:intergenic
ATGTTGCGTCTTCAAGATGA+AGG 0.577278 6_2:-78497233 Msa0929690:CDS
GATGACTTGGAGAAAGAAAG+AGG 0.577729 6_2:-78506297 Msa0929690:five_prime_UTR
TGGAATGTTGGAATAGGTGG+AGG 0.579922 6_2:+78505777 None:intergenic
CACGGACTATAGATACTTCA+CGG 0.580769 6_2:+78505190 None:intergenic
AGTGCCGAAGTCGACGCCGA+CGG 0.584965 6_2:+78507201 None:intergenic
TGCAGCGAACGTAGTAGCGA+AGG 0.586529 6_2:+78507167 None:intergenic
TTATTCTGTCAAATGGGATG+CGG 0.588007 6_2:-78503862 Msa0929690:five_prime_UTR
ATATTCATCTCTCAAGCTCG+TGG 0.588260 6_2:+78505113 None:intergenic
AATATGGCTGTCATAGCAGT+TGG 0.589918 6_2:-78505965 Msa0929690:five_prime_UTR
AGTGCTCTTGATTCTTGATG+CGG 0.591545 6_2:-78495441 Msa0929690:three_prime_UTR
TTCACCGGTTATTCATATGG+GGG 0.591878 6_2:-78500838 Msa0929690:five_prime_UTR
CACACCAATTTCCCCAGCAA+TGG 0.592509 6_2:+78500765 None:intergenic
ACTCCGATCTCAAGGAAACA+AGG 0.593051 6_2:-78507280 Msa0929690:five_prime_UTR
GAGTGGGAAGTGTTGGACTC+TGG 0.593310 6_2:-78507351 Msa0929690:five_prime_UTR
GTTGAAACATCCTGTTCTGT+AGG 0.595111 6_2:+78497209 None:intergenic
TTCCATCACATGATGACCCA+CGG 0.596134 6_2:-78505752 Msa0929690:five_prime_UTR
CAGGGGAAGCAGAAATGCCA+CGG 0.596363 6_2:-78506256 Msa0929690:five_prime_UTR
TTTCAAAACAGAAAACAAAG+TGG 0.597579 6_2:+78495276 None:intergenic
GTCAATCTTCTTGAGGAAGA+GGG 0.598448 6_2:-78504699 Msa0929690:five_prime_UTR
AACAAATTTAACCCCAGATG+AGG 0.599504 6_2:-78499067 Msa0929690:five_prime_UTR
AGGGGAAGCAGAAATGCCAC+GGG 0.599954 6_2:-78506255 Msa0929690:five_prime_UTR
CTGTGCAGTTGATGGGGTAA+GGG 0.600354 6_2:+78496129 None:intergenic
AACCGTGGGTCATCATGTGA+TGG 0.600868 6_2:+78505750 None:intergenic
AATTTAAAAGGAGAAGACTT+GGG 0.602381 6_2:+78496043 None:intergenic
TTCATTTCAATCTCTTAGTG+GGG 0.602434 6_2:+78495643 None:intergenic
GACTTCGGCACTCTCGATAA+CGG 0.603537 6_2:-78507190 Msa0929690:five_prime_UTR
GAAGCAGAAATGCCACGGGG+AGG 0.604701 6_2:-78506251 Msa0929690:five_prime_UTR
TGCACTGATGTACCTATGGA+TGG 0.609699 6_2:+78498537 None:intergenic
AGAAGTGGTCCGAAGTCCCA+TGG 0.610961 6_2:-78497824 Msa0929690:five_prime_UTR
CGCCGACGGGTTGGTCAGAG+AGG 0.612082 6_2:+78507215 None:intergenic
ATAGGGTGGATCCTTCCTAC+GGG 0.612230 6_2:+78505467 None:intergenic
ATCACAACAGTAAAAGCTGA+AGG 0.613555 6_2:+78498768 None:intergenic
ATTATAACTTCATCATGTAG+AGG 0.615662 6_2:-78505393 Msa0929690:five_prime_UTR
ATGTACCTATGGATGGCTGT+TGG 0.616981 6_2:+78498544 None:intergenic
AGAGAGGAGTTGGTTCATGT+CGG 0.618402 6_2:+78507231 None:intergenic
GCAAGAGCGGCTCTCATGCG+TGG 0.619075 6_2:+78507136 None:intergenic
AATCAACTGGAAAATGGATG+CGG 0.624557 6_2:-78495551 Msa0929690:three_prime_UTR
TTTAGCAGAATTCAGTTCGG+AGG 0.625569 6_2:-78506719 Msa0929690:intron
TTCAGATTCAAGGTGACGGG+CGG 0.627609 6_2:-78496168 Msa0929690:intron
TCTGACGGCGAGTGCAAGAG+CGG 0.629378 6_2:+78507123 None:intergenic
AAATGCATAATAGGTTCAGG+AGG 0.633643 6_2:+78498604 None:intergenic
TTTAACCGTGATGATCTGAA+AGG 0.633770 6_2:-78498583 Msa0929690:five_prime_UTR
TCTCTGACATCAGCAGCGCA+CGG 0.638213 6_2:+78505172 None:intergenic
ATGCACCAGATATACTCTGT+AGG 0.640563 6_2:-78497463 Msa0929690:intron
TAGCTGTGTCATAAAGACCA+TGG 0.640875 6_2:-78504772 Msa0929690:five_prime_UTR
TGACTTCAAAACCAAATATG+GGG 0.645184 6_2:-78504632 Msa0929690:intron
CCAATTTCCCCAGCAATGGT+CGG 0.646717 6_2:+78500769 None:intergenic
GCTGAACATGAGAAATAGGG+TGG 0.647160 6_2:+78505453 None:intergenic
CAACAAAACAAGAAAACCGT+GGG 0.648380 6_2:+78505736 None:intergenic
TGCCAACTGTGCAGTTGATG+GGG 0.648693 6_2:+78496123 None:intergenic
GTTTAATGCATAGAGGAACA+TGG 0.657057 6_2:+78505509 None:intergenic
AGCATCCTGCAGCCTCCCCG+TGG 0.657528 6_2:+78506239 None:intergenic
CTTGAAGAAGAAGATGAACG+TGG 0.660905 6_2:-78506937 Msa0929690:five_prime_UTR
AATGGGACCGACCATTGCTG+GGG 0.662960 6_2:-78500776 Msa0929690:five_prime_UTR
TTGTGGAGACATTCACGCAG+TGG 0.666494 6_2:-78495839 Msa0929690:CDS
TCAAACACGGCAAATGTTCG+GGG 0.671594 6_2:+78504747 None:intergenic
GCTGGCAAGAGAGCTGAAGT+CGG 0.672922 6_2:-78500706 Msa0929690:five_prime_UTR
GCAGTCCTTTCAGATCATCA+CGG 0.676757 6_2:+78498578 None:intergenic
ATGGCTGTTGGAAAAGTGAA+AGG 0.681632 6_2:+78498556 None:intergenic
GGAGCTGAAGAATGGGACCA+TGG 0.686960 6_2:-78497764 Msa0929690:intron
TCAACAAAACAAGAAAACCG+TGG 0.688709 6_2:+78505735 None:intergenic
AGTGGTCCGAAGTCCCATGG+TGG 0.688790 6_2:-78497821 Msa0929690:five_prime_UTR
CTCCTCTCTGACCAACCCGT+CGG 0.695070 6_2:-78507217 Msa0929690:five_prime_UTR
AAGTATTCACAAGCTTCCAG+AGG 0.701309 6_2:+78498810 None:intergenic
CCTGGAATCAATGTTAACAG+AGG 0.702536 6_2:-78505352 Msa0929690:intron
CCGTTTCTCCTGAGACCGTG+AGG 0.706500 6_2:-78506018 Msa0929690:five_prime_UTR
GCTGTCATGGAAGAGTACAG+GGG 0.722316 6_2:-78506273 Msa0929690:five_prime_UTR
CAATCCACTCGAACAAACGG+TGG 0.722672 6_2:-78496004 Msa0929690:CDS
GGGGAAGCAGAAATGCCACG+GGG 0.778748 6_2:-78506254 Msa0929690:five_prime_UTR
CTTGGGCATAAGTATCACTG+CGG 0.799446 6_2:+78496060 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAACTTTTTTATTTGAT+TGG - chr6_2:78499088-78499107 Msa0929690:five_prime_UTR 10.0%
!!! CGTAATTTTTTATTTTATTT+TGG - chr6_2:78499231-78499250 Msa0929690:intron 10.0%
!! TTTATTATAAGTTTATAACT+CGG + chr6_2:78499370-78499389 None:intergenic 10.0%
!! GATATAAAATTAGAATTTAA+GGG + chr6_2:78504348-78504367 None:intergenic 10.0%
!! TGATATAAAATTAGAATTTA+AGG + chr6_2:78504349-78504368 None:intergenic 10.0%
!!! ATTTTATATCAACATATTTA+TGG - chr6_2:78504358-78504377 Msa0929690:intron 10.0%
!!! TTTTATATCAACATATTTAT+GGG - chr6_2:78504359-78504378 Msa0929690:intron 10.0%
!! AAGTTAAACTATATTCATAT+AGG + chr6_2:78496104-78496123 None:intergenic 15.0%
!! AAAAAGAACATAACATAATT+TGG + chr6_2:78496206-78496225 None:intergenic 15.0%
!!! AAATTATGTTATGTTCTTTT+TGG - chr6_2:78496205-78496224 Msa0929690:intron 15.0%
!!! ATTTAAGACAGTTATATTTT+AGG - chr6_2:78497390-78497409 Msa0929690:five_prime_UTR 15.0%
!!! TTTCTTTGTTTACATTAAAA+TGG - chr6_2:78497560-78497579 Msa0929690:five_prime_UTR 15.0%
!! ATATATCAGTTATTAAACTA+TGG - chr6_2:78498618-78498637 Msa0929690:five_prime_UTR 15.0%
!! TATATCAGTTATTAAACTAT+GGG - chr6_2:78498619-78498638 Msa0929690:five_prime_UTR 15.0%
!!! TAAAAAGTTTGTGTTTTTTT+CGG + chr6_2:78499073-78499092 None:intergenic 15.0%
!! ATAAATTCATTATTCGAATT+TGG + chr6_2:78499149-78499168 None:intergenic 15.0%
!!! AAGTTTTTATTTTTGAATCA+AGG + chr6_2:78499415-78499434 None:intergenic 15.0%
!! ATACACAAACATTTATTATT+GGG - chr6_2:78501651-78501670 Msa0929690:intron 15.0%
!! TTAGTTGTATAATTTAACAA+TGG + chr6_2:78502130-78502149 None:intergenic 15.0%
!!! AATTGTTTATGTTTTAAAGT+AGG - chr6_2:78502148-78502167 Msa0929690:intron 15.0%
!! CTTAATGAGATAAATAATTT+AGG - chr6_2:78504487-78504506 Msa0929690:intron 15.0%
!! ATCAAAGAATATTGTTTATT+TGG + chr6_2:78504785-78504804 None:intergenic 15.0%
!!! AACAGTATGTATAAAATTTT+AGG - chr6_2:78507403-78507422 Msa0929690:five_prime_UTR 15.0%
!! TGATGCATAAATTGTTTAAT+TGG - chr6_2:78496544-78496563 Msa0929690:intron 20.0%
!! ACATGATGAAGTTATAATAT+TGG + chr6_2:78497239-78497258 None:intergenic 20.0%
!! AAAAAGAGAAGAAAAAAATG+AGG + chr6_2:78497332-78497351 None:intergenic 20.0%
!! CTTAAATCTTGAAAGAAAAA+AGG + chr6_2:78497377-78497396 None:intergenic 20.0%
!!! CTAAATATTCTGAGAAATTA+CGG - chr6_2:78497831-78497850 Msa0929690:intron 20.0%
!!! ATTTTTTAGATCATCAAACA+CGG + chr6_2:78497903-78497922 None:intergenic 20.0%
!! TATATTCATGTAATCATTGT+TGG - chr6_2:78498240-78498259 Msa0929690:intron 20.0%
!! AATTCATGTAGTGAAAATAA+AGG - chr6_2:78498424-78498443 Msa0929690:intron 20.0%
!!! TGGATTTTATATGTAATGAA+TGG - chr6_2:78498591-78498610 Msa0929690:five_prime_UTR 20.0%
!! TGGAAGAAAATTATCTAATT+AGG + chr6_2:78498653-78498672 None:intergenic 20.0%
!!! AATCTCATTTTTCCTAAATA+AGG - chr6_2:78498703-78498722 Msa0929690:intron 20.0%
!!! AATTTTTAACTTGAAACCAA+AGG + chr6_2:78499119-78499138 None:intergenic 20.0%
!!! CAAAAAATGTTGAATTTTGT+AGG + chr6_2:78499203-78499222 None:intergenic 20.0%
!! TTCTTTATCATACAAAAGTT+GGG + chr6_2:78501123-78501142 None:intergenic 20.0%
!! TCAATATATTTCAGTAACTT+TGG + chr6_2:78501486-78501505 None:intergenic 20.0%
!! GAAACAGAAAACTTAATTTA+TGG + chr6_2:78501606-78501625 None:intergenic 20.0%
!! CATACACAAACATTTATTAT+TGG - chr6_2:78501650-78501669 Msa0929690:intron 20.0%
!!! TTTTAACACCACAAAAATAA+TGG + chr6_2:78501723-78501742 None:intergenic 20.0%
!!! TTTTTGTGGTGTTAAAATTA+TGG - chr6_2:78501726-78501745 Msa0929690:intron 20.0%
!! GAAAAAGGAGAAATATTATA+AGG + chr6_2:78502247-78502266 None:intergenic 20.0%
!! TAAAACATTCATGAAGAAAA+AGG + chr6_2:78502262-78502281 None:intergenic 20.0%
!! CCTTATAACTTAAATATAGA+TGG + chr6_2:78502310-78502329 None:intergenic 20.0%
!!! CCATCTATATTTAAGTTATA+AGG - chr6_2:78502307-78502326 Msa0929690:intron 20.0%
!! ATATTAATATAGTCAACAGT+AGG - chr6_2:78502600-78502619 Msa0929690:intron 20.0%
!!! ATATGTTTGTGTTTTAAAGT+AGG - chr6_2:78502640-78502659 Msa0929690:intron 20.0%
!!! AGCAAGTATTTTTTTTCTTT+AGG - chr6_2:78502664-78502683 Msa0929690:intron 20.0%
!! AAAGAAAAAGGAGAAATATA+CGG + chr6_2:78502740-78502759 None:intergenic 20.0%
!! GTAATCAAAATATACTTCTT+CGG + chr6_2:78503203-78503222 None:intergenic 20.0%
!!! TTACAAGTTTTATATCTTGT+TGG - chr6_2:78503407-78503426 Msa0929690:intron 20.0%
!! ATGTTATACCCTAAAAAAAT+AGG + chr6_2:78503701-78503720 None:intergenic 20.0%
!! AATTGGTATAGAATTATTCA+AGG + chr6_2:78503978-78503997 None:intergenic 20.0%
!!! AAAGATGTGAAATTTTTGTT+AGG - chr6_2:78504182-78504201 Msa0929690:intron 20.0%
!!! AATAGGCTATTTATGTTTTT+TGG - chr6_2:78504211-78504230 Msa0929690:intron 20.0%
!!! AAATTAGAATTTAAGGGTTT+TGG + chr6_2:78504342-78504361 None:intergenic 20.0%
!!! CAAATTTTTGTATAATTCCA+TGG + chr6_2:78504927-78504946 None:intergenic 20.0%
!! AATTAATGTACCATATAAGA+AGG + chr6_2:78505135-78505154 None:intergenic 20.0%
!!! AAGTTTGCTTATATTACATA+TGG + chr6_2:78505311-78505330 None:intergenic 20.0%
!!! AAACTTTTTATGCTGTTATA+TGG - chr6_2:78505325-78505344 Msa0929690:intron 20.0%
!! AATGTAATAGATATATACAC+CGG - chr6_2:78505546-78505565 Msa0929690:five_prime_UTR 20.0%
!! TATTAAAAGAAGTTTATGTC+TGG + chr6_2:78506322-78506341 None:intergenic 20.0%
!! GTAAATGTCTGTTATTAATA+TGG + chr6_2:78506821-78506840 None:intergenic 20.0%
!! ATTAATAACAGACATTTACT+TGG - chr6_2:78506822-78506841 Msa0929690:five_prime_UTR 20.0%
!! GTTAAGTTTCTTGAAAGTAT+CGG - chr6_2:78495784-78495803 Msa0929690:exon 25.0%
! ACTTATAGATATGTCATAAC+CGG + chr6_2:78496025-78496044 None:intergenic 25.0%
! GTTATGACATATCTATAAGT+TGG - chr6_2:78496025-78496044 Msa0929690:CDS 25.0%
! TTAGTCATGTTAAGATAAGA+TGG - chr6_2:78496474-78496493 Msa0929690:intron 25.0%
!!! AAGATAAGATGGTTTTGTAT+TGG - chr6_2:78496485-78496504 Msa0929690:intron 25.0%
!! CTTATCTTCTTTTTATGCTA+TGG - chr6_2:78496724-78496743 Msa0929690:intron 25.0%
!! AGTAACGAATCATTAACTTT+TGG - chr6_2:78496945-78496964 Msa0929690:intron 25.0%
!! ATTAACTTTTGGCAATTTAC+CGG - chr6_2:78496956-78496975 Msa0929690:intron 25.0%
! TGGAAACTAACATATTACTT+TGG - chr6_2:78497007-78497026 Msa0929690:intron 25.0%
! GGAAACTAACATATTACTTT+GGG - chr6_2:78497008-78497027 Msa0929690:intron 25.0%
!!! GGGATATTTTAAAAAATCTC+TGG + chr6_2:78497150-78497169 None:intergenic 25.0%
!!! GATTTTTTAAAATATCCCGT+AGG - chr6_2:78497152-78497171 Msa0929690:intron 25.0%
!!! GTTATAATATTGGTCTTTAC+TGG + chr6_2:78497229-78497248 None:intergenic 25.0%
! ATTATAACTTCATCATGTAG+AGG - chr6_2:78497241-78497260 Msa0929690:CDS 25.0%
! TTGAAAGAAAAAAGGAGAAA+AGG + chr6_2:78497369-78497388 None:intergenic 25.0%
!!! AGTTATATTTTAGGTTGCTA+GGG - chr6_2:78497399-78497418 Msa0929690:five_prime_UTR 25.0%
!! TAACAAACTGTGCATTATTT+TGG - chr6_2:78497587-78497606 Msa0929690:five_prime_UTR 25.0%
!!! TAGTTCTGATATCAAATTTC+TGG - chr6_2:78497738-78497757 Msa0929690:intron 25.0%
!! ACTATGGATGATTTTATATG+AGG + chr6_2:78498204-78498223 None:intergenic 25.0%
! TTACATGAATATAAGCATGT+GGG + chr6_2:78498233-78498252 None:intergenic 25.0%
! ATTACATGAATATAAGCATG+TGG + chr6_2:78498234-78498253 None:intergenic 25.0%
! TGATAAGCATAAAACTTTAG+TGG - chr6_2:78498374-78498393 Msa0929690:intron 25.0%
! ATAAAGGAAATTTCCTTACT+TGG - chr6_2:78498440-78498459 Msa0929690:intron 25.0%
!! ATAAACAATTGGTTCCTATA+GGG + chr6_2:78498470-78498489 None:intergenic 25.0%
!! TAGCTAAAAGCATAAACAAT+TGG + chr6_2:78498481-78498500 None:intergenic 25.0%
!! TTTTCATTTACTTTGCCATT+AGG - chr6_2:78498501-78498520 Msa0929690:intron 25.0%
! ATTTATATGTTTAAGCAGCT+TGG - chr6_2:78498571-78498590 Msa0929690:five_prime_UTR 25.0%
! GAATGTTAATACCTAAACAT+AGG + chr6_2:78498682-78498701 None:intergenic 25.0%
! TAAAGAAATTGGTCAATGTT+TGG + chr6_2:78498885-78498904 None:intergenic 25.0%
! AACCAGATTGATAAAGAAAT+TGG + chr6_2:78498896-78498915 None:intergenic 25.0%
!!! ACTTTTTTATTTGATTGGCT+TGG - chr6_2:78499093-78499112 Msa0929690:intron 25.0%
! TTGCAATGAAAAACTAATCT+GGG + chr6_2:78499268-78499287 None:intergenic 25.0%
! ATTGCAATGAAAAACTAATC+TGG + chr6_2:78499269-78499288 None:intergenic 25.0%
!!! AGGGTTTTAAAGAAAACATA+GGG + chr6_2:78501073-78501092 None:intergenic 25.0%
!!! TAGGGTTTTAAAGAAAACAT+AGG + chr6_2:78501074-78501093 None:intergenic 25.0%
! TCTTTATCATACAAAAGTTG+GGG + chr6_2:78501122-78501141 None:intergenic 25.0%
! CTTCTTTATCATACAAAAGT+TGG + chr6_2:78501124-78501143 None:intergenic 25.0%
! TGCAGATGAAAAATTAACTA+GGG + chr6_2:78501356-78501375 None:intergenic 25.0%
! GTCATTGTAGTATAATAAAC+TGG - chr6_2:78501531-78501550 Msa0929690:intron 25.0%
!! GCATATATGAGAACTTTTTA+TGG - chr6_2:78501964-78501983 Msa0929690:intron 25.0%
!! TCATGTATGTAACATCTTTT+TGG + chr6_2:78502453-78502472 None:intergenic 25.0%
! GAAAATACTCACAAAGAAAA+AGG + chr6_2:78502752-78502771 None:intergenic 25.0%
! GAAAATAAAGACGATATAAG+TGG + chr6_2:78503011-78503030 None:intergenic 25.0%
! GATTAATATGTAACTAATGC+AGG + chr6_2:78503319-78503338 None:intergenic 25.0%
!! ATTTTTCACAAAGATTCATG+TGG - chr6_2:78503430-78503449 Msa0929690:intron 25.0%
!!! ATGGAAACTCCTATTTTTTT+AGG - chr6_2:78503689-78503708 Msa0929690:intron 25.0%
!!! TGGAAACTCCTATTTTTTTA+GGG - chr6_2:78503690-78503709 Msa0929690:intron 25.0%
!!! TTTAGGGTATAACATTTTTC+TGG - chr6_2:78503706-78503725 Msa0929690:intron 25.0%
!!! TGTAGGTCACATTTTTTAAT+CGG + chr6_2:78503794-78503813 None:intergenic 25.0%
! TAAAAAATGTGACCTACAAA+AGG - chr6_2:78503796-78503815 Msa0929690:intron 25.0%
! TTAAAATGCATAATAGGTTC+AGG + chr6_2:78504036-78504055 None:intergenic 25.0%
!! TTTTTGTTAGGTTCTCAAAT+AGG - chr6_2:78504194-78504213 Msa0929690:intron 25.0%
!! GAAAAATAGATGGATTTGAT+TGG + chr6_2:78504276-78504295 None:intergenic 25.0%
! TGCATAACTTGAAAAATAGA+TGG + chr6_2:78504286-78504305 None:intergenic 25.0%
!!! GTTGGTGATAAAAAAATTGA+CGG + chr6_2:78504320-78504339 None:intergenic 25.0%
! TTATGGGTTTACAATGAATT+TGG - chr6_2:78504375-78504394 Msa0929690:intron 25.0%
! TATGGGTTTACAATGAATTT+GGG - chr6_2:78504376-78504395 Msa0929690:intron 25.0%
!! TTTACAATGAATTTGGGATA+TGG - chr6_2:78504382-78504401 Msa0929690:intron 25.0%
!!! TTTGGGATATGGAATAATTT+TGG - chr6_2:78504393-78504412 Msa0929690:intron 25.0%
! ATTATACAGAACATTAGAGT+AGG - chr6_2:78504463-78504482 Msa0929690:intron 25.0%
! TTATACAGAACATTAGAGTA+GGG - chr6_2:78504464-78504483 Msa0929690:intron 25.0%
!!! CAAATTTTAGAGTTCTAAGT+AGG - chr6_2:78504598-78504617 Msa0929690:intron 25.0%
!!! ATTGCATCTTTTTGATAATC+TGG - chr6_2:78504681-78504700 Msa0929690:five_prime_UTR 25.0%
!! GAGCATATTTCTATATTATG+AGG - chr6_2:78504711-78504730 Msa0929690:five_prime_UTR 25.0%
! TATATGGTACATTAATTCTG+AGG - chr6_2:78505138-78505157 Msa0929690:five_prime_UTR 25.0%
! TTTGCTTATATTACATATGG+AGG + chr6_2:78505308-78505327 None:intergenic 25.0%
! TGCTAATGAAACAAACTTTA+AGG + chr6_2:78505504-78505523 None:intergenic 25.0%
!!! TTATTTTTACATGCTCTTTC+AGG - chr6_2:78505721-78505740 Msa0929690:five_prime_UTR 25.0%
! TCTTTCAGGAAAATTATTAC+TGG - chr6_2:78505735-78505754 Msa0929690:five_prime_UTR 25.0%
! TCATTTCAAAACTAAAGCAA+TGG + chr6_2:78505962-78505981 None:intergenic 25.0%
!!! AAAAAAGGTACTAGAATCTA+AGG + chr6_2:78506191-78506210 None:intergenic 25.0%
! GTTGCAATTGTAAATTGTAA+TGG - chr6_2:78506370-78506389 Msa0929690:intron 25.0%
! AACTTCTCATTTATACGAAA+AGG + chr6_2:78506424-78506443 None:intergenic 25.0%
!!! TACTGTTTTTTACAAGGATA+AGG + chr6_2:78506552-78506571 None:intergenic 25.0%
! AATTTAAAAGGAGAAGACTT+GGG + chr6_2:78506594-78506613 None:intergenic 25.0%
!! ACTGATTTCAGGAATTTAAA+AGG + chr6_2:78506606-78506625 None:intergenic 25.0%
! TTTCATTTCAATCTCTTAGT+GGG + chr6_2:78506995-78507014 None:intergenic 25.0%
! TTACAAAATCAACTGGAAAA+TGG - chr6_2:78507077-78507096 Msa0929690:intron 25.0%
! TACAATATTGTATTTGAGTC+TGG - chr6_2:78507106-78507125 Msa0929690:intron 25.0%
! TCTTCTATTTATCTGTAAGA+AGG - chr6_2:78507241-78507260 Msa0929690:five_prime_UTR 25.0%
! CTTCTATTTATCTGTAAGAA+GGG - chr6_2:78507242-78507261 Msa0929690:five_prime_UTR 25.0%
! TTCTATTTATCTGTAAGAAG+GGG - chr6_2:78507243-78507262 Msa0929690:five_prime_UTR 25.0%
!!! AAAACAGAATGCTTTTTTGA+AGG + chr6_2:78507308-78507327 None:intergenic 25.0%
! TTTCAAAACAGAAAACAAAG+TGG + chr6_2:78507361-78507380 None:intergenic 25.0%
TGGAAACAAGTTTCAATGAT+CGG + chr6_2:78495383-78495402 None:intergenic 30.0%
GCAATCAATAATTTCGATTG+AGG + chr6_2:78495653-78495672 None:intergenic 30.0%
TTCAAAGAGCTTATGAATAC+CGG - chr6_2:78496003-78496022 Msa0929690:CDS 30.0%
! TAGCAGAAAGAATTGGTTTA+AGG + chr6_2:78496454-78496473 None:intergenic 30.0%
TGACTAATAGCAGAAAGAAT+TGG + chr6_2:78496461-78496480 None:intergenic 30.0%
!!! ATAAGATGGTTTTGTATTGG+AGG - chr6_2:78496488-78496507 Msa0929690:intron 30.0%
!! AGGTGATTTTGGGAATTATA+TGG - chr6_2:78496519-78496538 Msa0929690:intron 30.0%
!! GGTGATTTTGGGAATTATAT+GGG - chr6_2:78496520-78496539 Msa0929690:intron 30.0%
TTTCTTGTAAAAATGCCTCA+CGG + chr6_2:78496634-78496653 None:intergenic 30.0%
!! TGAGGCATTTTTACAAGAAA+TGG - chr6_2:78496634-78496653 Msa0929690:intron 30.0%
ATGGTACCATTTATGCAATA+TGG - chr6_2:78496653-78496672 Msa0929690:intron 30.0%
!! TACACTCTGAAATTGTACAA+GGG + chr6_2:78496789-78496808 None:intergenic 30.0%
!!! GAGTTGATAAAGGTTCATTT+TGG - chr6_2:78496812-78496831 Msa0929690:intron 30.0%
! TTAACTTTTGGCAATTTACC+GGG - chr6_2:78496957-78496976 Msa0929690:intron 30.0%
!!! TTTTAAAATATCCCGTAGGA+AGG - chr6_2:78497156-78497175 Msa0929690:intron 30.0%
!! TAATATTGGTCTTTACTGGA+CGG + chr6_2:78497225-78497244 None:intergenic 30.0%
!!! CAGTTATATTTTAGGTTGCT+AGG - chr6_2:78497398-78497417 Msa0929690:five_prime_UTR 30.0%
TCTAATGCTGATATATCTGA+GGG + chr6_2:78497806-78497825 None:intergenic 30.0%
TAAGAAAGTCAATCTTCTTG+AGG - chr6_2:78497928-78497947 Msa0929690:intron 30.0%
TCACAATTTCTTCAGGAATA+TGG + chr6_2:78497985-78498004 None:intergenic 30.0%
! TTTGAAGTCACAATTTCTTC+AGG + chr6_2:78497992-78498011 None:intergenic 30.0%
TGTGACTTCAAAACCAAATA+TGG - chr6_2:78498000-78498019 Msa0929690:intron 30.0%
GTGACTTCAAAACCAAATAT+GGG - chr6_2:78498001-78498020 Msa0929690:intron 30.0%
TGACTTCAAAACCAAATATG+GGG - chr6_2:78498002-78498021 Msa0929690:intron 30.0%
GTAATGTACAAGATAGAGAA+AGG + chr6_2:78498046-78498065 None:intergenic 30.0%
TTTACTCTCTGATTCTGATA+TGG - chr6_2:78498089-78498108 Msa0929690:intron 30.0%
TTACTCTCTGATTCTGATAT+GGG - chr6_2:78498090-78498109 Msa0929690:intron 30.0%
GTGATATACAAGATAGAGAA+AGG + chr6_2:78498135-78498154 None:intergenic 30.0%
CACTATTAAAATGACCTCAT+GGG + chr6_2:78498356-78498375 None:intergenic 30.0%
TCACTATTAAAATGACCTCA+TGG + chr6_2:78498357-78498376 None:intergenic 30.0%
! CATAAACAATTGGTTCCTAT+AGG + chr6_2:78498471-78498490 None:intergenic 30.0%
TTTAATGAAACACAGCCTAA+TGG + chr6_2:78498519-78498538 None:intergenic 30.0%
CTGCTTAAACATATAAATGC+TGG + chr6_2:78498569-78498588 None:intergenic 30.0%
TTCCAGTAAAACCTATGTTT+AGG - chr6_2:78498668-78498687 Msa0929690:intron 30.0%
! TACCTAAACATAGGTTTTAC+TGG + chr6_2:78498673-78498692 None:intergenic 30.0%
GAATTGGAATACTCAAACAT+TGG - chr6_2:78498738-78498757 Msa0929690:five_prime_UTR 30.0%
ACTGAACTTATTCTGTCAAA+TGG - chr6_2:78498765-78498784 Msa0929690:five_prime_UTR 30.0%
CTGAACTTATTCTGTCAAAT+GGG - chr6_2:78498766-78498785 Msa0929690:five_prime_UTR 30.0%
GACCAATTTCTTTATCAATC+TGG - chr6_2:78498891-78498910 Msa0929690:intron 30.0%
TCAAATTAGAACTTAAACCC+AGG - chr6_2:78499000-78499019 Msa0929690:five_prime_UTR 30.0%
CAAATTAGAACTTAAACCCA+GGG - chr6_2:78499001-78499020 Msa0929690:five_prime_UTR 30.0%
AAATTAGAACTTAAACCCAG+GGG - chr6_2:78499002-78499021 Msa0929690:five_prime_UTR 30.0%
TTCATAAACCAATCCAACTT+GGG - chr6_2:78499027-78499046 Msa0929690:five_prime_UTR 30.0%
!!! AGTTTGTGTTTTTTTCGGTT+TGG + chr6_2:78499068-78499087 None:intergenic 30.0%
AAATGATATGTCATCCACAT+AGG + chr6_2:78499323-78499342 None:intergenic 30.0%
TGACATATCATTTGACACAT+AGG - chr6_2:78499330-78499349 Msa0929690:intron 30.0%
ACACCAAAACTAATAGAAGA+TGG - chr6_2:78499575-78499594 Msa0929690:intron 30.0%
CACCAAAACTAATAGAAGAT+GGG - chr6_2:78499576-78499595 Msa0929690:intron 30.0%
!! AACCCATCTTCTATTAGTTT+TGG + chr6_2:78499581-78499600 None:intergenic 30.0%
GAATTTCAACAGTTCTATCA+TGG - chr6_2:78499910-78499929 Msa0929690:intron 30.0%
ATCAGAAATTTGAGTCGATT+TGG - chr6_2:78499934-78499953 Msa0929690:intron 30.0%
ATCAGAAATTTGAGTCGATT+TGG - chr6_2:78499934-78499953 Msa0929690:intron 30.0%
GAATTTCAACAGTTCTATCA+TGG - chr6_2:78499910-78499929 Msa0929690:intron 30.0%
ATCAGAAATTTGAGTCGATT+TGG - chr6_2:78499934-78499953 Msa0929690:intron 30.0%
TTGAATTTGGTAGGACTTAA+AGG + chr6_2:78500767-78500786 None:intergenic 30.0%
ATCTTCAAGAGAGTTGAATT+TGG + chr6_2:78500780-78500799 None:intergenic 30.0%
!!! GGGTTTTAAAGAAAACATAG+GGG + chr6_2:78501072-78501091 None:intergenic 30.0%
!! AAGTATTTGTTGTGTCATCT+TGG - chr6_2:78501141-78501160 Msa0929690:intron 30.0%
!! AGTATTTGTTGTGTCATCTT+GGG - chr6_2:78501142-78501161 Msa0929690:intron 30.0%
TTCGTTTGATTCAATGAACT+CGG + chr6_2:78501317-78501336 None:intergenic 30.0%
GTGCAGATGAAAAATTAACT+AGG + chr6_2:78501357-78501376 None:intergenic 30.0%
TTAATTTATGGCACTACAAG+TGG + chr6_2:78501594-78501613 None:intergenic 30.0%
TAATACATTATACCGATGAG+CGG - chr6_2:78501681-78501700 Msa0929690:intron 30.0%
!!! GGTTTTTTAATGTGTTCTCT+TGG + chr6_2:78502109-78502128 None:intergenic 30.0%
!!! ATCGGAAGATTTTAAGACAT+TGG + chr6_2:78502484-78502503 None:intergenic 30.0%
GAAAATACAGAAGATAGAAG+CGG + chr6_2:78502546-78502565 None:intergenic 30.0%
TCAAGTGTTTAAGGATGAAA+GGG + chr6_2:78502570-78502589 None:intergenic 30.0%
TTCAAGTGTTTAAGGATGAA+AGG + chr6_2:78502571-78502590 None:intergenic 30.0%
ACGATATAAGTGGTTGAATT+TGG + chr6_2:78503001-78503020 None:intergenic 30.0%
TCAAGTGTTTAACGATGAAA+GGG + chr6_2:78503035-78503054 None:intergenic 30.0%
TTCAAGTGTTTAACGATGAA+AGG + chr6_2:78503036-78503055 None:intergenic 30.0%
TCTTAATATAGTCAAACAGC+AGG - chr6_2:78503066-78503085 Msa0929690:intron 30.0%
ATTTGAATGCTGCTCAAAAA+CGG + chr6_2:78503161-78503180 None:intergenic 30.0%
GTTATGCATCAGAATCATAA+TGG + chr6_2:78503239-78503258 None:intergenic 30.0%
TGATGTGTCTAGTATCATAT+TGG - chr6_2:78503377-78503396 Msa0929690:intron 30.0%
! TTTTGACATTTTCCTCATCT+GGG + chr6_2:78503582-78503601 None:intergenic 30.0%
!! ATTTTGACATTTTCCTCATC+TGG + chr6_2:78503583-78503602 None:intergenic 30.0%
TGTCAAAATAGTGATGCAAA+TGG - chr6_2:78503594-78503613 Msa0929690:intron 30.0%
CATAATTAAGCTCCTTTACA+CGG + chr6_2:78503672-78503691 None:intergenic 30.0%
! CTTTTACTGTTGTGATTGTT+GGG - chr6_2:78503873-78503892 Msa0929690:five_prime_UTR 30.0%
! ACTAGGTACTGCAATATTAA+GGG + chr6_2:78503923-78503942 None:intergenic 30.0%
AATTGATATCTTTCCATGCA+GGG - chr6_2:78503994-78504013 Msa0929690:intron 30.0%
TCACGGTTAAAATGCATAAT+AGG + chr6_2:78504042-78504061 None:intergenic 30.0%
! AATTTCACATCTTTTCCTGA+AGG + chr6_2:78504176-78504195 None:intergenic 30.0%
TGATAAAAAAATTGACGGCA+AGG + chr6_2:78504315-78504334 None:intergenic 30.0%
!! TAGAATTTAAGGGTTTTGGT+TGG + chr6_2:78504338-78504357 None:intergenic 30.0%
!! TTCAGTGAAATCTGTTGTTT+TGG - chr6_2:78504512-78504531 Msa0929690:intron 30.0%
TTATTTGGAAGATGCATTCA+CGG + chr6_2:78504770-78504789 None:intergenic 30.0%
ATTCTTTGATTGTAGAGAAG+TGG - chr6_2:78504795-78504814 Msa0929690:five_prime_UTR 30.0%
ATTCAACAACTACGAAAGAA+AGG + chr6_2:78504904-78504923 None:intergenic 30.0%
TAACTCGTATAATCTGTGTT+TGG - chr6_2:78504967-78504986 Msa0929690:five_prime_UTR 30.0%
TAGAAGAGATTCACTTTGTT+GGG - chr6_2:78505015-78505034 Msa0929690:intron 30.0%
TCTGGAAACAAAAATAATGC+AGG - chr6_2:78505052-78505071 Msa0929690:intron 30.0%
CTGTCTTGTAAATCATTTAC+AGG - chr6_2:78505358-78505377 Msa0929690:five_prime_UTR 30.0%
!! TTTACAGGTTGATATTGCTT+TGG - chr6_2:78505373-78505392 Msa0929690:five_prime_UTR 30.0%
!! TTACATTGATAGCGTAGAAA+AGG + chr6_2:78505533-78505552 None:intergenic 30.0%
!!! GAAATGAGAAGTTGTTTTTC+CGG + chr6_2:78505568-78505587 None:intergenic 30.0%
! TCATGGTTTAAAGTTGAGAT+GGG + chr6_2:78505591-78505610 None:intergenic 30.0%
! ATCATGGTTTAAAGTTGAGA+TGG + chr6_2:78505592-78505611 None:intergenic 30.0%
! GGAGCTTTTGAATTTTATCA+TGG + chr6_2:78505608-78505627 None:intergenic 30.0%
TCACATCTCTTTATCTACAA+TGG - chr6_2:78505634-78505653 Msa0929690:intron 30.0%
ATCTTGAATTGTGGATGAAA+GGG - chr6_2:78505658-78505677 Msa0929690:intron 30.0%
! ATTGGTAGCTATGTAAAATC+CGG + chr6_2:78505766-78505785 None:intergenic 30.0%
! GAGCATGAATATTTGCATTT+TGG - chr6_2:78505891-78505910 Msa0929690:intron 30.0%
!! TCAGTTGATGTTGAAGTTTT+AGG - chr6_2:78506007-78506026 Msa0929690:five_prime_UTR 30.0%
!! CAGTTGATGTTGAAGTTTTA+GGG - chr6_2:78506008-78506027 Msa0929690:five_prime_UTR 30.0%
!!! GTTAGTCTTTTGAATCTAGA+GGG - chr6_2:78506030-78506049 Msa0929690:five_prime_UTR 30.0%
TTCAACAGTCAAAGCAAAAA+AGG + chr6_2:78506206-78506225 None:intergenic 30.0%
ATTATCCTGTTTCAGATTCA+AGG - chr6_2:78506456-78506475 Msa0929690:intron 30.0%
GAATTTAAAAGGAGAAGACT+TGG + chr6_2:78506595-78506614 None:intergenic 30.0%
TTCATTTCAATCTCTTAGTG+GGG + chr6_2:78506994-78507013 None:intergenic 30.0%
GTTTCATTTCAATCTCTTAG+TGG + chr6_2:78506996-78507015 None:intergenic 30.0%
TGCAACTTTACAAAATCAAC+TGG - chr6_2:78507070-78507089 Msa0929690:intron 30.0%
! CTATCACCAATTAGTAGTTT+TGG - chr6_2:78507141-78507160 Msa0929690:five_prime_UTR 30.0%
TGTCTACCAAAACTACTAAT+TGG + chr6_2:78507150-78507169 None:intergenic 30.0%
ATAGAAGAACACCAAACAAA+TGG + chr6_2:78507229-78507248 None:intergenic 30.0%
! AAAAAATCTGAGACACAGAG+TGG - chr6_2:78495266-78495285 Msa0929690:three_prime_UTR 35.0%
! AAAAATCTGAGACACAGAGT+GGG - chr6_2:78495267-78495286 Msa0929690:three_prime_UTR 35.0%
TGATACTGTTTATGAGCTGT+TGG - chr6_2:78495849-78495868 Msa0929690:CDS 35.0%
!! GGTTTTAGCAGAATTCAGTT+CGG - chr6_2:78495912-78495931 Msa0929690:intron 35.0%
! AATTTGGCGAAGTTGTTGTT+AGG + chr6_2:78496190-78496209 None:intergenic 35.0%
TATGCTGAAAGGTTACCAAT+TGG - chr6_2:78496573-78496592 Msa0929690:intron 35.0%
TGACAGCCATATTGCATAAA+TGG + chr6_2:78496662-78496681 None:intergenic 35.0%
! TATGCTATGGTTGTGTTGTT+TGG - chr6_2:78496737-78496756 Msa0929690:intron 35.0%
!! CTACACTCTGAAATTGTACA+AGG + chr6_2:78496790-78496809 None:intergenic 35.0%
!! GAGTGTAGTTGAGTTGATAA+AGG - chr6_2:78496802-78496821 Msa0929690:intron 35.0%
CAACAAAACAAGAAAACCGT+GGG + chr6_2:78496901-78496920 None:intergenic 35.0%
TCAACAAAACAAGAAAACCG+TGG + chr6_2:78496902-78496921 None:intergenic 35.0%
! TAACTTTTGGCAATTTACCG+GGG - chr6_2:78496958-78496977 Msa0929690:intron 35.0%
ACTAGTAATGTTGTCTTGCT+TGG - chr6_2:78496987-78497006 Msa0929690:intron 35.0%
CATAACTGCAGACTGTTATT+GGG + chr6_2:78497038-78497057 None:intergenic 35.0%
TCATAACTGCAGACTGTTAT+TGG + chr6_2:78497039-78497058 None:intergenic 35.0%
!! ACTGTTTTAAGCTCATTCGT+TGG + chr6_2:78497076-78497095 None:intergenic 35.0%
GTTTAATGCATAGAGGAACA+TGG + chr6_2:78497128-78497147 None:intergenic 35.0%
! ATCTCTGGTTTAATGCATAG+AGG + chr6_2:78497135-78497154 None:intergenic 35.0%
GAAGCTGAACATGAGAAATA+GGG + chr6_2:78497187-78497206 None:intergenic 35.0%
AGAAGCTGAACATGAGAAAT+AGG + chr6_2:78497188-78497207 None:intergenic 35.0%
ACTTCATCATGTAGAGGAAA+AGG - chr6_2:78497247-78497266 Msa0929690:CDS 35.0%
!! CTCTGTTAACATTGATTCCA+GGG + chr6_2:78497284-78497303 None:intergenic 35.0%
AGAGATTGAATCTGCCTATT+TGG - chr6_2:78497480-78497499 Msa0929690:intron 35.0%
TCCATAATGAACCTGTTGTT+GGG - chr6_2:78497642-78497661 Msa0929690:intron 35.0%
ACATGATATATCAACTCACG+TGG + chr6_2:78497704-78497723 None:intergenic 35.0%
CTAATGCTGATATATCTGAG+GGG + chr6_2:78497805-78497824 None:intergenic 35.0%
CTCTAATGCTGATATATCTG+AGG + chr6_2:78497807-78497826 None:intergenic 35.0%
CTCAGATATATCAGCATTAG+AGG - chr6_2:78497805-78497824 Msa0929690:five_prime_UTR 35.0%
AAGAGGGTAAAATTTCTTCG+TGG - chr6_2:78497951-78497970 Msa0929690:intron 35.0%
AGAGGGTAAAATTTCTTCGT+GGG - chr6_2:78497952-78497971 Msa0929690:intron 35.0%
AAATATGGGGTGAGTTCAAA+GGG - chr6_2:78498015-78498034 Msa0929690:intron 35.0%
TACTCTCTGATTCTGATATG+GGG - chr6_2:78498091-78498110 Msa0929690:intron 35.0%
AAAAACAGGACGAAAATCTC+AGG + chr6_2:78498294-78498313 None:intergenic 35.0%
TGTTAGCTCATAGGAAAAAC+AGG + chr6_2:78498308-78498327 None:intergenic 35.0%
!! TTTTGATTGTTCTCAGCAGT+AGG - chr6_2:78498540-78498559 Msa0929690:intron 35.0%
!! CTTCACAACATGCCTTATTT+AGG + chr6_2:78498718-78498737 None:intergenic 35.0%
CTAAATAAGGCATGTTGTGA+AGG - chr6_2:78498716-78498735 Msa0929690:five_prime_UTR 35.0%
TTATTCTGTCAAATGGGATG+CGG - chr6_2:78498772-78498791 Msa0929690:five_prime_UTR 35.0%
GAATCAAAACCTGATCATCA+AGG + chr6_2:78498821-78498840 None:intergenic 35.0%
!!! GATCAGGTTTTGATTCTTCT+AGG - chr6_2:78498825-78498844 Msa0929690:five_prime_UTR 35.0%
ACCTGACTAAACTCTATTAG+GGG + chr6_2:78498981-78499000 None:intergenic 35.0%
GACCTGACTAAACTCTATTA+GGG + chr6_2:78498982-78499001 None:intergenic 35.0%
TGACCTGACTAAACTCTATT+AGG + chr6_2:78498983-78499002 None:intergenic 35.0%
GTTCATAAACCAATCCAACT+TGG - chr6_2:78499026-78499045 Msa0929690:five_prime_UTR 35.0%
!! AATTTTGACCCAAGTTGGAT+TGG + chr6_2:78499038-78499057 None:intergenic 35.0%
TAGTCCATACTGTTAAGTTC+TGG - chr6_2:78499291-78499310 Msa0929690:intron 35.0%
!! ACTAATAGAAGATGGGTTAC+AGG - chr6_2:78499583-78499602 Msa0929690:intron 35.0%
TCTATATGCTACACTACACT+GGG + chr6_2:78499623-78499642 None:intergenic 35.0%
TTCTATATGCTACACTACAC+TGG + chr6_2:78499624-78499643 None:intergenic 35.0%
TTCAGTTGCATCAGTTACAA+GGG + chr6_2:78499648-78499667 None:intergenic 35.0%
ATTCAGTTGCATCAGTTACA+AGG + chr6_2:78499649-78499668 None:intergenic 35.0%
TCTATATGCTACACTACACT+GGG + chr6_2:78499623-78499642 None:intergenic 35.0%
TTCTATATGCTACACTACAC+TGG + chr6_2:78499624-78499643 None:intergenic 35.0%
TTCAGTTGCATCAGTTACAA+GGG + chr6_2:78499648-78499667 None:intergenic 35.0%
ATTCAGTTGCATCAGTTACA+AGG + chr6_2:78499649-78499668 None:intergenic 35.0%
TTCAGTTGCATCAGTTACAA+GGG + chr6_2:78499648-78499667 None:intergenic 35.0%
ATTCAGTTGCATCAGTTACA+AGG + chr6_2:78499649-78499668 None:intergenic 35.0%
TTCAGTTGCATCAGTTACAA+GGG + chr6_2:78499648-78499667 None:intergenic 35.0%
ATTCAGTTGCATCAGTTACA+AGG + chr6_2:78499649-78499668 None:intergenic 35.0%
ATTTGGAGAACTATCTCCTT+TGG - chr6_2:78500684-78500703 Msa0929690:five_prime_UTR 35.0%
TCAAGAGAGTTGAATTTGGT+AGG + chr6_2:78500776-78500795 None:intergenic 35.0%
TAATTAGCTGCAAAAACTCG+TGG - chr6_2:78500863-78500882 Msa0929690:intron 35.0%
TAAAGAAAACATAGGGGACT+GGG + chr6_2:78501066-78501085 None:intergenic 35.0%
TTAAAGAAAACATAGGGGAC+TGG + chr6_2:78501067-78501086 None:intergenic 35.0%
ATCATACAAAAGTTGGGGAT+TGG + chr6_2:78501117-78501136 None:intergenic 35.0%
!!! TGGGTTTCAGTTTTGAGAAA+CGG - chr6_2:78501183-78501202 Msa0929690:intron 35.0%
!! ATTGGAGATGGATTAATGTC+AGG + chr6_2:78501395-78501414 None:intergenic 35.0%
! TATGTCACTTCAGCAGATAT+TGG + chr6_2:78501413-78501432 None:intergenic 35.0%
! ATCTTCACCGGTTATTCATA+TGG - chr6_2:78501793-78501812 Msa0929690:intron 35.0%
! TCTTCACCGGTTATTCATAT+GGG - chr6_2:78501794-78501813 Msa0929690:intron 35.0%
GAGTATTTCTCTTGCTCAAT+GGG - chr6_2:78501841-78501860 Msa0929690:intron 35.0%
TTATAGACCATCTGTCCTAA+TGG - chr6_2:78501897-78501916 Msa0929690:intron 35.0%
TCTCATATATGCACCAATCT+TGG + chr6_2:78501956-78501975 None:intergenic 35.0%
! TTTAAAATGAAGCCGATGCA+AGG + chr6_2:78502507-78502526 None:intergenic 35.0%
AAGATAGAAGCGGTTGAATT+TGG + chr6_2:78502536-78502555 None:intergenic 35.0%
! CATGCACTTTCAAGTGTTTA+AGG + chr6_2:78502579-78502598 None:intergenic 35.0%
!!! TCGCTTTTCTGCTTTTTGTT+CGG - chr6_2:78502874-78502893 Msa0929690:intron 35.0%
!!! TTTTCTGCTTTTTGTTCGGT+TGG - chr6_2:78502878-78502897 Msa0929690:intron 35.0%
TCCAAGACTATGTTACATAC+AGG - chr6_2:78502915-78502934 Msa0929690:intron 35.0%
ACCTGTATGTAACATAGTCT+TGG + chr6_2:78502919-78502938 None:intergenic 35.0%
TATACTTCTTCGGAAAAGCT+GGG + chr6_2:78503193-78503212 None:intergenic 35.0%
ATATACTTCTTCGGAAAAGC+TGG + chr6_2:78503194-78503213 None:intergenic 35.0%
!! TCATAATGGACTCAGATATG+AGG + chr6_2:78503225-78503244 None:intergenic 35.0%
TGAATTGTTTAACACAGCCT+AGG - chr6_2:78503277-78503296 Msa0929690:intron 35.0%
CTAGACACATCAAATTTCCA+CGG + chr6_2:78503369-78503388 None:intergenic 35.0%
AACAAATTTAACCCCAGATG+AGG - chr6_2:78503567-78503586 Msa0929690:intron 35.0%
! TTTGACATTTTCCTCATCTG+GGG + chr6_2:78503581-78503600 None:intergenic 35.0%
CGGTTTGTAAAAGCAGTATA+GGG + chr6_2:78503652-78503671 None:intergenic 35.0%
ACGGTTTGTAAAAGCAGTAT+AGG + chr6_2:78503653-78503672 None:intergenic 35.0%
! TGCTTTTACAAACCGTGTAA+AGG - chr6_2:78503657-78503676 Msa0929690:intron 35.0%
CGTGTAAAGGAGCTTAATTA+TGG - chr6_2:78503670-78503689 Msa0929690:intron 35.0%
ATCACAACAGTAAAAGCTGA+AGG + chr6_2:78503869-78503888 None:intergenic 35.0%
! GCTTTTACTGTTGTGATTGT+TGG - chr6_2:78503872-78503891 Msa0929690:five_prime_UTR 35.0%
! ATTAAGGGAAGTGCAATAGT+AGG + chr6_2:78503908-78503927 None:intergenic 35.0%
! CACTAGGTACTGCAATATTA+AGG + chr6_2:78503924-78503943 None:intergenic 35.0%
CTGCATGGAAAGATATCAAT+TGG + chr6_2:78503995-78504014 None:intergenic 35.0%
CAATTGATATCTTTCCATGC+AGG - chr6_2:78503993-78504012 Msa0929690:intron 35.0%
AAATGCATAATAGGTTCAGG+AGG + chr6_2:78504033-78504052 None:intergenic 35.0%
TTTAACCGTGATGATCTGAA+AGG - chr6_2:78504051-78504070 Msa0929690:intron 35.0%
!!! TTGTGTAGTTTTGTACCTTC+AGG - chr6_2:78504158-78504177 Msa0929690:intron 35.0%
!!! TTTTGGCTTAGCTCTACTTT+TGG - chr6_2:78504228-78504247 Msa0929690:intron 35.0%
!! TCTACTTTTGGTCTCTAGTT+TGG - chr6_2:78504240-78504259 Msa0929690:intron 35.0%
!!! AATCTGTTGTTTTGGTGAGA+AGG - chr6_2:78504520-78504539 Msa0929690:intron 35.0%
GCTTTAACATCATCTCGAAA+AGG - chr6_2:78504642-78504661 Msa0929690:five_prime_UTR 35.0%
TTTCGTAGTTGTTGAATCCA+TGG - chr6_2:78504907-78504926 Msa0929690:intron 35.0%
AATCTGTGTTTGGTCATGTT+TGG - chr6_2:78504977-78504996 Msa0929690:five_prime_UTR 35.0%
ATCTGTGTTTGGTCATGTTT+GGG - chr6_2:78504978-78504997 Msa0929690:five_prime_UTR 35.0%
GTAGAAGAGATTCACTTTGT+TGG - chr6_2:78505014-78505033 Msa0929690:intron 35.0%
AAACACCTACAGAGTATATC+TGG + chr6_2:78505179-78505198 None:intergenic 35.0%
GATATACTCTGTAGGTGTTT+CGG - chr6_2:78505179-78505198 Msa0929690:five_prime_UTR 35.0%
TCTTTGCTCAATTTCCAGTA+CGG + chr6_2:78505450-78505469 None:intergenic 35.0%
! CATGGTTTAAAGTTGAGATG+GGG + chr6_2:78505590-78505609 None:intergenic 35.0%
GATAAAGAGATGTGAGAAGA+AGG + chr6_2:78505629-78505648 None:intergenic 35.0%
TACAATGGCATCTTGAATTG+TGG - chr6_2:78505649-78505668 Msa0929690:intron 35.0%
CATCTTGAATTGTGGATGAA+AGG - chr6_2:78505657-78505676 Msa0929690:intron 35.0%
TCAGGAAAATTATTACTGGC+TGG - chr6_2:78505739-78505758 Msa0929690:five_prime_UTR 35.0%
! AAAATTATTACTGGCTGGAC+CGG - chr6_2:78505744-78505763 Msa0929690:five_prime_UTR 35.0%
TACCAATCAAGAGTCTATTC+TGG - chr6_2:78505779-78505798 Msa0929690:five_prime_UTR 35.0%
TGAAATCCATTCCTTTCCAA+CGG + chr6_2:78505923-78505942 None:intergenic 35.0%
CAAAACTAAAGCAATGGTAC+TGG + chr6_2:78505956-78505975 None:intergenic 35.0%
!!! GGTTAGTCTTTTGAATCTAG+AGG - chr6_2:78506029-78506048 Msa0929690:five_prime_UTR 35.0%
GTAAATTGTAATGGCAGCAT+AGG - chr6_2:78506379-78506398 Msa0929690:intron 35.0%
!!! GCGGTATACTGTTTTTTACA+AGG + chr6_2:78506558-78506577 None:intergenic 35.0%
!! TGGATTGGAATACTGATTTC+AGG + chr6_2:78506617-78506636 None:intergenic 35.0%
AAGCAAAGGTCTATTCTTCT+AGG - chr6_2:78506658-78506677 Msa0929690:intron 35.0%
GGCATAAATCTTTCCACAAT+AGG + chr6_2:78506684-78506703 None:intergenic 35.0%
ATTGTGGAAAGATTTATGCC+TGG - chr6_2:78506684-78506703 Msa0929690:intron 35.0%
TTGTGGAAAGATTTATGCCT+GGG - chr6_2:78506685-78506704 Msa0929690:intron 35.0%
!! GAATATGCTTGTTATAACCC+AGG + chr6_2:78506705-78506724 None:intergenic 35.0%
TCCAGCTAAAATCTGCAATA+GGG + chr6_2:78506745-78506764 None:intergenic 35.0%
TTCCAGCTAAAATCTGCAAT+AGG + chr6_2:78506746-78506765 None:intergenic 35.0%
!!! CAAGTCAGTTTTGACTTAGA+AGG - chr6_2:78506943-78506962 Msa0929690:five_prime_UTR 35.0%
! TTTGACTTAGAAGGCAAGTT+AGG - chr6_2:78506952-78506971 Msa0929690:intron 35.0%
AGTTAGGTGTTAGTTGTATG+TGG - chr6_2:78506968-78506987 Msa0929690:intron 35.0%
!! TAGTATAGATTGATTTGCGC+TGG - chr6_2:78507021-78507040 Msa0929690:intron 35.0%
AATCAACTGGAAAATGGATG+CGG - chr6_2:78507083-78507102 Msa0929690:intron 35.0%
AGAGTGAGAGTGAAGAAGAA+TGG - chr6_2:78495308-78495327 Msa0929690:three_prime_UTR 40.0%
!! AAGCCTTGTTTCCTTGAGAT+CGG + chr6_2:78495360-78495379 None:intergenic 40.0%
AAATACTAACCCGACTCTGA+CGG + chr6_2:78495529-78495548 None:intergenic 40.0%
CTTGAAGAAGAAGATGAACG+TGG - chr6_2:78495697-78495716 Msa0929690:three_prime_UTR 40.0%
!! GAAAGTATCGGAGCTGAATT+TGG - chr6_2:78495796-78495815 Msa0929690:CDS 40.0%
ATTGTTGTCTCAGGCGATTT+CGG - chr6_2:78495891-78495910 Msa0929690:intron 40.0%
TTTAGCAGAATTCAGTTCGG+AGG - chr6_2:78495915-78495934 Msa0929690:intron 40.0%
! AGAATTCAGTTCGGAGGTAT+TGG - chr6_2:78495921-78495940 Msa0929690:intron 40.0%
!! TCGAGTATCGAAAGATGACT+TGG - chr6_2:78496324-78496343 Msa0929690:intron 40.0%
! GATGACTTGGAGAAAGAAAG+AGG - chr6_2:78496337-78496356 Msa0929690:intron 40.0%
! TCTGTTGATGGAAGGTTCAA+AGG - chr6_2:78496426-78496445 Msa0929690:intron 40.0%
TTGTATTGGAGGTTACGAAG+AGG - chr6_2:78496499-78496518 Msa0929690:intron 40.0%
! AGGTTACGAAGAGGTGATTT+TGG - chr6_2:78496508-78496527 Msa0929690:intron 40.0%
! GGTTACGAAGAGGTGATTTT+GGG - chr6_2:78496509-78496528 Msa0929690:intron 40.0%
ATTGGTTGCAGTATGCTGAA+AGG - chr6_2:78496562-78496581 Msa0929690:intron 40.0%
ATCACTTTCTCGAGTCCAAT+TGG + chr6_2:78496591-78496610 None:intergenic 40.0%
TTGGACTCGAGAAAGTGATT+CGG - chr6_2:78496592-78496611 Msa0929690:intron 40.0%
AATATGGCTGTCATAGCAGT+TGG - chr6_2:78496669-78496688 Msa0929690:intron 40.0%
! TGGAGATTTTTCTGACACAC+AGG - chr6_2:78496689-78496708 Msa0929690:intron 40.0%
! TTTGTTGAATCTGAAGCTGC+TGG - chr6_2:78496914-78496933 Msa0929690:intron 40.0%
! TTGTTGAATCTGAAGCTGCT+GGG - chr6_2:78496915-78496934 Msa0929690:intron 40.0%
! AACTTTTGGCAATTTACCGG+GGG - chr6_2:78496959-78496978 Msa0929690:intron 40.0%
ACATTACTAGTGAAAACCCC+CGG + chr6_2:78496978-78496997 None:intergenic 40.0%
!! CCTCTGTTAACATTGATTCC+AGG + chr6_2:78497285-78497304 None:intergenic 40.0%
CCTGGAATCAATGTTAACAG+AGG - chr6_2:78497282-78497301 Msa0929690:CDS 40.0%
AATGAGGCTTCTCAGATCAA+TGG + chr6_2:78497316-78497335 None:intergenic 40.0%
!!! TATTTTAGGTTGCTAGGGTG+CGG - chr6_2:78497404-78497423 Msa0929690:five_prime_UTR 40.0%
! CACGGACTATAGATACTTCA+CGG + chr6_2:78497447-78497466 None:intergenic 40.0%
AACTTGATCTCGCTCCAAAT+AGG + chr6_2:78497497-78497516 None:intergenic 40.0%
ATATTCATCTCTCAAGCTCG+TGG + chr6_2:78497524-78497543 None:intergenic 40.0%
CTCCATAATGAACCTGTTGT+TGG - chr6_2:78497641-78497660 Msa0929690:intron 40.0%
TCCCAACAACAGGTTCATTA+TGG + chr6_2:78497646-78497665 None:intergenic 40.0%
TCATACACAATCCCAACAAC+AGG + chr6_2:78497656-78497675 None:intergenic 40.0%
TAGCTGTGTCATAAAGACCA+TGG - chr6_2:78497862-78497881 Msa0929690:intron 40.0%
ATCAAACACGGCAAATGTTC+GGG + chr6_2:78497891-78497910 None:intergenic 40.0%
CATCAAACACGGCAAATGTT+CGG + chr6_2:78497892-78497911 None:intergenic 40.0%
AGTCAATCTTCTTGAGGAAG+AGG - chr6_2:78497934-78497953 Msa0929690:intron 40.0%
GTCAATCTTCTTGAGGAAGA+GGG - chr6_2:78497935-78497954 Msa0929690:intron 40.0%
CTTTGAACTCACCCCATATT+TGG + chr6_2:78498016-78498035 None:intergenic 40.0%
CAAATATGGGGTGAGTTCAA+AGG - chr6_2:78498014-78498033 Msa0929690:intron 40.0%
AATATGGGGTGAGTTCAAAG+GGG - chr6_2:78498016-78498035 Msa0929690:intron 40.0%
CAGAGAGTAAAGAACTGTGT+AGG + chr6_2:78498080-78498099 None:intergenic 40.0%
AGCATGTGGGAATTACACTA+TGG + chr6_2:78498220-78498239 None:intergenic 40.0%
AGCTGTGAATGTTAGCTCAT+AGG + chr6_2:78498317-78498336 None:intergenic 40.0%
AGTGATTATCATGACCCATG+AGG - chr6_2:78498339-78498358 Msa0929690:intron 40.0%
AAGGCATGTTGTGAAGGAAT+TGG - chr6_2:78498722-78498741 Msa0929690:five_prime_UTR 40.0%
! TACAGACTTCCTTGATGATC+AGG - chr6_2:78498809-78498828 Msa0929690:five_prime_UTR 40.0%
ACCCCTAATAGAGTTTAGTC+AGG - chr6_2:78498977-78498996 Msa0929690:five_prime_UTR 40.0%
! ATTGGTTTATGAACACCCCT+GGG + chr6_2:78499020-78499039 None:intergenic 40.0%
!! TGTGCAATTTTGACCCAAGT+TGG + chr6_2:78499043-78499062 None:intergenic 40.0%
!! TATTTGATTGGCTTGGCCTT+TGG - chr6_2:78499100-78499119 Msa0929690:intron 40.0%
! TTCTGAAGAAACTGAAGCAG+AGG + chr6_2:78499471-78499490 None:intergenic 40.0%
TGTTTATGACCAGCTATAGC+CGG + chr6_2:78499797-78499816 None:intergenic 40.0%
! CACTAAACTGATTCAGTTGC+CGG + chr6_2:78499986-78500005 None:intergenic 40.0%
TGTTTATGACCAGCTATAGC+CGG + chr6_2:78499797-78499816 None:intergenic 40.0%
AATCAAGCTTTCAGAGATGG+TGG + chr6_2:78500667-78500686 None:intergenic 40.0%
CCAAATCAAGCTTTCAGAGA+TGG + chr6_2:78500670-78500689 None:intergenic 40.0%
! CCATCTCTGAAAGCTTGATT+TGG - chr6_2:78500667-78500686 Msa0929690:five_prime_UTR 40.0%
GCAAATCACATATCTCGTAC+AGG - chr6_2:78500800-78500819 Msa0929690:five_prime_UTR 40.0%
! CGTACAGGATCAAATCCTTT+TGG - chr6_2:78500815-78500834 Msa0929690:five_prime_UTR 40.0%
!! AGGATCAAATCCTTTTGGCT+TGG - chr6_2:78500820-78500839 Msa0929690:five_prime_UTR 40.0%
TAGATTGAAGCCAAGCCAAA+AGG + chr6_2:78500833-78500852 None:intergenic 40.0%
AAGAACGGGAACAAAGATCA+GGG + chr6_2:78501038-78501057 None:intergenic 40.0%
AAAGAAAACATAGGGGACTG+GGG + chr6_2:78501065-78501084 None:intergenic 40.0%
GTGCATTTGGATATCAGCTT+GGG - chr6_2:78501164-78501183 Msa0929690:intron 40.0%
!!! GGGTTTCAGTTTTGAGAAAC+GGG - chr6_2:78501184-78501203 Msa0929690:intron 40.0%
!!! GGTTTCAGTTTTGAGAAACG+GGG - chr6_2:78501185-78501204 Msa0929690:intron 40.0%
!!! AGTTTTGAGAAACGGGGAAA+AGG - chr6_2:78501191-78501210 Msa0929690:intron 40.0%
!!! GTTTTGAGAAACGGGGAAAA+GGG - chr6_2:78501192-78501211 Msa0929690:intron 40.0%
!! CTCTGGGACACTTTATTGTT+CGG + chr6_2:78501226-78501245 None:intergenic 40.0%
CAAACCAACAAATTGCCTCT+GGG + chr6_2:78501242-78501261 None:intergenic 40.0%
!! GGCAATTTGTTGGTTTGCAA+AGG - chr6_2:78501245-78501264 Msa0929690:intron 40.0%
CAAACGAAAGTTGTTGCTCT+AGG - chr6_2:78501329-78501348 Msa0929690:intron 40.0%
ACTTCAGCAGATATTGGAGA+TGG + chr6_2:78501407-78501426 None:intergenic 40.0%
! AATAATGGAACACCGCTCAT+CGG + chr6_2:78501708-78501727 None:intergenic 40.0%
!!! GCGGTGTTCCATTATTTTTG+TGG - chr6_2:78501712-78501731 Msa0929690:intron 40.0%
ATCTACAGATGTGTCACAAC+AGG - chr6_2:78501768-78501787 Msa0929690:intron 40.0%
TCACAACAGGTTATCTTCAC+CGG - chr6_2:78501781-78501800 Msa0929690:intron 40.0%
! CTTCACCGGTTATTCATATG+GGG - chr6_2:78501795-78501814 Msa0929690:intron 40.0%
! TTCACCGGTTATTCATATGG+GGG - chr6_2:78501796-78501815 Msa0929690:intron 40.0%
TAAGCCCCCATATGAATAAC+CGG + chr6_2:78501803-78501822 None:intergenic 40.0%
CAAGAGAAATACTCGCTTTC+TGG + chr6_2:78501835-78501854 None:intergenic 40.0%
CGAGTATTTCTCTTGCTCAA+TGG - chr6_2:78501840-78501859 Msa0929690:intron 40.0%
AGCATATCCATTAGGACAGA+TGG + chr6_2:78501907-78501926 None:intergenic 40.0%
! GATTGCAAAGCAAAGCACTA+GGG + chr6_2:78502365-78502384 None:intergenic 40.0%
AAATCTTCCGATCCTTGCAT+CGG - chr6_2:78502492-78502511 Msa0929690:intron 40.0%
!! GATTACAAAGCATCGCACTT+GGG + chr6_2:78502832-78502851 None:intergenic 40.0%
TTACATACAGGTGCTTGTCT+CGG - chr6_2:78502927-78502946 Msa0929690:intron 40.0%
! GCAAGGATCGGAAGATTTTA+CGG + chr6_2:78502490-78502509 None:intergenic 40.0%
TTCAAGATGAAGCTGATGCA+AGG + chr6_2:78502972-78502991 None:intergenic 40.0%
! GCCTAGGTTCGTTATACTTT+TGG - chr6_2:78503293-78503312 Msa0929690:intron 40.0%
! GCCAAAAGTATAACGAACCT+AGG + chr6_2:78503297-78503316 None:intergenic 40.0%
!! GCTTTCTAAAGTTAGATCCG+TGG - chr6_2:78503349-78503368 Msa0929690:intron 40.0%
AAGTATTCACAAGCTTCCAG+AGG + chr6_2:78503827-78503846 None:intergenic 40.0%
CAAGTGGATGTATACTCACT+AGG + chr6_2:78503940-78503959 None:intergenic 40.0%
GTATACATCCACTTGCCAAA+AGG - chr6_2:78503945-78503964 Msa0929690:intron 40.0%
ATAATAGGTTCAGGAGGCTT+TGG + chr6_2:78504027-78504046 None:intergenic 40.0%
ATGGCTGTTGGAAAAGTGAA+AGG + chr6_2:78504081-78504100 None:intergenic 40.0%
GCATTGCATTCACAAACAGA+AGG - chr6_2:78504117-78504136 Msa0929690:intron 40.0%
! CATTCACAAACAGAAGGTGT+TGG - chr6_2:78504123-78504142 Msa0929690:intron 40.0%
!! ATTTTGGTAGTTCAGAAGCC+AGG - chr6_2:78504409-78504428 Msa0929690:intron 40.0%
! GGAACTTTGGCTGAGTTTTA+AGG - chr6_2:78504440-78504459 Msa0929690:intron 40.0%
AAACATTGTGCTTCCACCAT+GGG + chr6_2:78504829-78504848 None:intergenic 40.0%
TCTGTGTTTGGTCATGTTTG+GGG - chr6_2:78504979-78504998 Msa0929690:five_prime_UTR 40.0%
TTGCCTTCAGCCTTCTTATA+TGG - chr6_2:78505122-78505141 Msa0929690:five_prime_UTR 40.0%
GTACCATATAAGAAGGCTGA+AGG + chr6_2:78505128-78505147 None:intergenic 40.0%
AGAGTATATCTGGTGCATAG+AGG + chr6_2:78505169-78505188 None:intergenic 40.0%
ATGCACCAGATATACTCTGT+AGG - chr6_2:78505171-78505190 Msa0929690:five_prime_UTR 40.0%
TATGTCTCCACGAACAATAC+CGG + chr6_2:78505235-78505254 None:intergenic 40.0%
ATGTTGCGTCTTCAAGATGA+AGG - chr6_2:78505401-78505420 Msa0929690:five_prime_UTR 40.0%
GTTGAAACATCCTGTTCTGT+AGG + chr6_2:78505428-78505447 None:intergenic 40.0%
TGAATTGTGGATGAAAGGGA+TGG - chr6_2:78505662-78505681 Msa0929690:intron 40.0%
GAATTGTGGATGAAAGGGAT+GGG - chr6_2:78505663-78505682 Msa0929690:intron 40.0%
CACCAGAATAGACTCTTGAT+TGG + chr6_2:78505784-78505803 None:intergenic 40.0%
! AGAGTCTATTCTGGTGATGT+TGG - chr6_2:78505788-78505807 Msa0929690:five_prime_UTR 40.0%
! TGATGTTGGCACTTCTTTTG+AGG - chr6_2:78505802-78505821 Msa0929690:five_prime_UTR 40.0%
AAATCCATTCCTTTCCAACG+GGG + chr6_2:78505921-78505940 None:intergenic 40.0%
GAAATCCATTCCTTTCCAAC+GGG + chr6_2:78505922-78505941 None:intergenic 40.0%
! AGTCTTTTGAATCTAGAGGG+AGG - chr6_2:78506033-78506052 Msa0929690:five_prime_UTR 40.0%
CTGTTTCAGATTCAAGGTGA+CGG - chr6_2:78506462-78506481 Msa0929690:intron 40.0%
TGTTTCAGATTCAAGGTGAC+GGG - chr6_2:78506463-78506482 Msa0929690:intron 40.0%
TTCCAATCCACTCGAACAAA+CGG - chr6_2:78506627-78506646 Msa0929690:intron 40.0%
CTATTCTTCTAGGCCTATTG+TGG - chr6_2:78506668-78506687 Msa0929690:intron 40.0%
!! TCCCTATTGCAGATTTTAGC+TGG - chr6_2:78506741-78506760 Msa0929690:five_prime_UTR 40.0%
!!! CAGATTTTAGCTGGAATTGC+TGG - chr6_2:78506750-78506769 Msa0929690:five_prime_UTR 40.0%
!!! CAGTTTTGGCTCTTAGTTTG+TGG - chr6_2:78506778-78506797 Msa0929690:five_prime_UTR 40.0%
GAGATAAAGAATCACACTGC+TGG + chr6_2:78506871-78506890 None:intergenic 40.0%
GCACTCTTATTATTCTGTGC+AGG + chr6_2:78507178-78507197 None:intergenic 40.0%
AGTGCTCTTGATTCTTGATG+CGG - chr6_2:78507193-78507212 Msa0929690:five_prime_UTR 40.0%
ATCTGTAAGAAGGGGATATG+TGG - chr6_2:78507251-78507270 Msa0929690:five_prime_UTR 40.0%
TCTGTAAGAAGGGGATATGT+GGG - chr6_2:78507252-78507271 Msa0929690:five_prime_UTR 40.0%
ACTCCGATCTCAAGGAAACA+AGG - chr6_2:78495354-78495373 Msa0929690:three_prime_UTR 45.0%
! AGAGAGGAGTTGGTTCATGT+CGG + chr6_2:78495406-78495425 None:intergenic 45.0%
TGGCTCAGAGAAGATAAGTG+AGG + chr6_2:78495564-78495583 None:intergenic 45.0%
! ACGTCTCCAATCAGAAGTGT+CGG + chr6_2:78495587-78495606 None:intergenic 45.0%
! AACAATTCCGGCTTGTCAAC+GGG + chr6_2:78495877-78495896 None:intergenic 45.0%
! CAACAATTCCGGCTTGTCAA+CGG + chr6_2:78495878-78495897 None:intergenic 45.0%
ATCGCCTGAGACAACAATTC+CGG + chr6_2:78495889-78495908 None:intergenic 45.0%
!! CGGAGGTATTGGAGTCTATT+CGG - chr6_2:78495932-78495951 Msa0929690:intron 45.0%
GAAAGAAAGAGGAGCTGTCA+TGG - chr6_2:78496348-78496367 Msa0929690:intron 45.0%
! AGCTGTCATGGAAGAGTACA+GGG - chr6_2:78496360-78496379 Msa0929690:intron 45.0%
TGCTCATTGGACTCTGTTGA+TGG - chr6_2:78496414-78496433 Msa0929690:intron 45.0%
! CATTGGACTCTGTTGATGGA+AGG - chr6_2:78496418-78496437 Msa0929690:intron 45.0%
TAAAAATGCCTCACGGTCTC+AGG + chr6_2:78496627-78496646 None:intergenic 45.0%
!!! GATCAGGTGCTGGAATTTTC+TGG + chr6_2:78496838-78496857 None:intergenic 45.0%
TGGAATGTTGGAATAGGTGG+AGG + chr6_2:78496860-78496879 None:intergenic 45.0%
TCCACCTATTCCAACATTCC+AGG - chr6_2:78496859-78496878 Msa0929690:CDS 45.0%
ACCTGGAATGTTGGAATAGG+TGG + chr6_2:78496863-78496882 None:intergenic 45.0%
GGAACCTGGAATGTTGGAAT+AGG + chr6_2:78496866-78496885 None:intergenic 45.0%
! TGTGATGGAACCTGGAATGT+TGG + chr6_2:78496872-78496891 None:intergenic 45.0%
TTCCATCACATGATGACCCA+CGG - chr6_2:78496882-78496901 Msa0929690:CDS 45.0%
! TGTTGAATCTGAAGCTGCTG+GGG - chr6_2:78496916-78496935 Msa0929690:intron 45.0%
AATAGGGTGGATCCTTCCTA+CGG + chr6_2:78497171-78497190 None:intergenic 45.0%
GCTGAACATGAGAAATAGGG+TGG + chr6_2:78497184-78497203 None:intergenic 45.0%
AAAAGGAACTCTTGAAGCCC+TGG - chr6_2:78497264-78497283 Msa0929690:CDS 45.0%
! CACGTGGTAGAAGAGTCTTT+TGG + chr6_2:78497688-78497707 None:intergenic 45.0%
TCAAACACGGCAAATGTTCG+GGG + chr6_2:78497890-78497909 None:intergenic 45.0%
TGATATGGGGCGAGTTCAAA+GGG - chr6_2:78498104-78498123 Msa0929690:intron 45.0%
CCTATAGGGAAAGCCAAGTA+AGG + chr6_2:78498456-78498475 None:intergenic 45.0%
! CCTTACTTGGCTTTCCCTAT+AGG - chr6_2:78498453-78498472 Msa0929690:intron 45.0%
!! GATTGGTTTATGAACACCCC+TGG + chr6_2:78499021-78499040 None:intergenic 45.0%
CGAGCCAGAACTTAACAGTA+TGG + chr6_2:78499298-78499317 None:intergenic 45.0%
AAGAAACTGAAGCAGAGGTG+GGG + chr6_2:78499466-78499485 None:intergenic 45.0%
GAAGAAACTGAAGCAGAGGT+GGG + chr6_2:78499467-78499486 None:intergenic 45.0%
TGAAGAAACTGAAGCAGAGG+TGG + chr6_2:78499468-78499487 None:intergenic 45.0%
CATAACTAAGCGCATAACCG+AGG - chr6_2:78499494-78499513 Msa0929690:intron 45.0%
! ATAACCGAGGTGCTCACATA+TGG - chr6_2:78499507-78499526 Msa0929690:intron 45.0%
AACTCCATATGTGAGCACCT+CGG + chr6_2:78499514-78499533 None:intergenic 45.0%
CTTGACATGACGTCATTCAC+TGG + chr6_2:78499547-78499566 None:intergenic 45.0%
CAGTGAATGACGTCATGTCA+AGG - chr6_2:78499545-78499564 Msa0929690:intron 45.0%
GTCTCCTACTCATCCTAAAC+CGG - chr6_2:78499775-78499794 Msa0929690:intron 45.0%
! ATAGCCGGTTTAGGATGAGT+AGG + chr6_2:78499782-78499801 None:intergenic 45.0%
!! AGTCGATTTGGTGACTTCCT+CGG - chr6_2:78499946-78499965 Msa0929690:intron 45.0%
GTCTCCTACTCATCCTAAAC+CGG - chr6_2:78499775-78499794 Msa0929690:intron 45.0%
! ATAGCCGGTTTAGGATGAGT+AGG + chr6_2:78499782-78499801 None:intergenic 45.0%
!! AGTCGATTTGGTGACTTCCT+CGG - chr6_2:78499946-78499965 Msa0929690:intron 45.0%
!! CACTACACTGATTCAGTTGC+CGG + chr6_2:78500290-78500309 None:intergenic 45.0%
GTCTCCTACTCATCCTAAAC+CGG - chr6_2:78499775-78499794 Msa0929690:intron 45.0%
! ATAGCCGGTTTAGGATGAGT+AGG + chr6_2:78499782-78499801 None:intergenic 45.0%
TGTTCATGACCAGCTATAGC+CGG + chr6_2:78500405-78500424 None:intergenic 45.0%
!! AGTCGATTTGGTGACTTCCT+CGG - chr6_2:78499946-78499965 Msa0929690:intron 45.0%
TCATGGAGGAAGATGATGCA+AGG + chr6_2:78500629-78500648 None:intergenic 45.0%
AAAGGAGTTCTTGCTCATGG+AGG + chr6_2:78500643-78500662 None:intergenic 45.0%
GGAAAAGGAGTTCTTGCTCA+TGG + chr6_2:78500646-78500665 None:intergenic 45.0%
!! GCTTTCAGAGATGGTGGAAA+AGG + chr6_2:78500661-78500680 None:intergenic 45.0%
!! CTATCTCCTTTGGTGTCAAC+AGG - chr6_2:78500694-78500713 Msa0929690:five_prime_UTR 45.0%
GTTCAACCTGTTGACACCAA+AGG + chr6_2:78500703-78500722 None:intergenic 45.0%
GCAAAAACTCGTGGATTCTG+CGG - chr6_2:78500872-78500891 Msa0929690:intron 45.0%
CAAAAACTCGTGGATTCTGC+GGG - chr6_2:78500873-78500892 Msa0929690:intron 45.0%
!! GTGTTTTGAGCAGCATATGC+AGG - chr6_2:78500907-78500926 Msa0929690:intron 45.0%
GTACTGTATGGTTTCTGCCA+TGG + chr6_2:78500948-78500967 None:intergenic 45.0%
! CATCTTGGTTGCATTGGTAG+AGG - chr6_2:78500992-78501011 Msa0929690:intron 45.0%
GGAACAAAGATCAGGGGTTA+GGG + chr6_2:78501031-78501050 None:intergenic 45.0%
AGAACGGGAACAAAGATCAG+GGG + chr6_2:78501037-78501056 None:intergenic 45.0%
GAAGAACGGGAACAAAGATC+AGG + chr6_2:78501039-78501058 None:intergenic 45.0%
AAGAAAACATAGGGGACTGG+GGG + chr6_2:78501064-78501083 None:intergenic 45.0%
AGGGCAAAAAGGGAGTTCTA+GGG + chr6_2:78501092-78501111 None:intergenic 45.0%
TAGGGCAAAAAGGGAGTTCT+AGG + chr6_2:78501093-78501112 None:intergenic 45.0%
!! CAAAAGTTGGGGATTGGCTA+GGG + chr6_2:78501111-78501130 None:intergenic 45.0%
!! ACAAAAGTTGGGGATTGGCT+AGG + chr6_2:78501112-78501131 None:intergenic 45.0%
TGTGTCATCTTGGGTGCATT+TGG - chr6_2:78501151-78501170 Msa0929690:intron 45.0%
GGTGCATTTGGATATCAGCT+TGG - chr6_2:78501163-78501182 Msa0929690:intron 45.0%
! CGAACAATAAAGTGTCCCAG+AGG - chr6_2:78501224-78501243 Msa0929690:intron 45.0%
GCAAACCAACAAATTGCCTC+TGG + chr6_2:78501243-78501262 None:intergenic 45.0%
GGTTTGCAAAGGTGATGAGT+CGG - chr6_2:78501256-78501275 Msa0929690:intron 45.0%
ATGAGTCGGTCTAGAGGTTT+AGG - chr6_2:78501270-78501289 Msa0929690:intron 45.0%
TGAGTCGGTCTAGAGGTTTA+GGG - chr6_2:78501271-78501290 Msa0929690:intron 45.0%
! TAGAGGTTTAGGGCTTGGTA+GGG - chr6_2:78501281-78501300 Msa0929690:intron 45.0%
! GTCCTAATGGATATGCTTGC+TGG - chr6_2:78501910-78501929 Msa0929690:intron 45.0%
TGCCAGCAAGCATATCCATT+AGG + chr6_2:78501915-78501934 None:intergenic 45.0%
! CGATTGCAAAGCAAAGCACT+AGG + chr6_2:78502366-78502385 None:intergenic 45.0%
AATGAAGCCGATGCAAGGAT+CGG + chr6_2:78502502-78502521 None:intergenic 45.0%
!! CGATTACAAAGCATCGCACT+TGG + chr6_2:78502833-78502852 None:intergenic 45.0%
GATGAAGCTGATGCAAGGAT+CGG + chr6_2:78502967-78502986 None:intergenic 45.0%
CAAACAGCAGGTGTGTGTTT+AGG - chr6_2:78503078-78503097 Msa0929690:intron 45.0%
AATGCTGCTCAAAAACGGAG+AGG + chr6_2:78503156-78503175 None:intergenic 45.0%
AAGCAGTCTGTGCTCAAGAT+AGG - chr6_2:78503623-78503642 Msa0929690:intron 45.0%
AGCAGTCTGTGCTCAAGATA+GGG - chr6_2:78503624-78503643 Msa0929690:intron 45.0%
! CCAGAGGATCAACCTTTTGT+AGG + chr6_2:78503811-78503830 None:intergenic 45.0%
! CCTACAAAAGGTTGATCCTC+TGG - chr6_2:78503808-78503827 Msa0929690:intron 45.0%
! ATTCAAGGTCTGCTGCCTTT+TGG + chr6_2:78503963-78503982 None:intergenic 45.0%
TGATATCTTTCCATGCAGGG+TGG - chr6_2:78503997-78504016 Msa0929690:intron 45.0%
GCAGTCCTTTCAGATCATCA+CGG + chr6_2:78504059-78504078 None:intergenic 45.0%
! CTTTTCCAACAGCCATCCAT+AGG - chr6_2:78504085-78504104 Msa0929690:intron 45.0%
ATGTACCTATGGATGGCTGT+TGG + chr6_2:78504093-78504112 None:intergenic 45.0%
! TGCACTGATGTACCTATGGA+TGG + chr6_2:78504100-78504119 None:intergenic 45.0%
! GCAATGCACTGATGTACCTA+TGG + chr6_2:78504104-78504123 None:intergenic 45.0%
TTCAGAAGCCAGGAGTTTAG+TGG - chr6_2:78504419-78504438 Msa0929690:intron 45.0%
CCAAAGTTCCACTAAACTCC+TGG + chr6_2:78504430-78504449 None:intergenic 45.0%
CCAGGAGTTTAGTGGAACTT+TGG - chr6_2:78504427-78504446 Msa0929690:intron 45.0%
CAAACATTGTGCTTCCACCA+TGG + chr6_2:78504830-78504849 None:intergenic 45.0%
! CATGGTGGAAGCACAATGTT+TGG - chr6_2:78504828-78504847 Msa0929690:intron 45.0%
GGTACAGATATGCTTTCCTG+TGG - chr6_2:78504849-78504868 Msa0929690:intron 45.0%
TTTCCTGTGGAGCTGAAGAA+TGG - chr6_2:78504862-78504881 Msa0929690:intron 45.0%
TTCCTGTGGAGCTGAAGAAT+GGG - chr6_2:78504863-78504882 Msa0929690:intron 45.0%
! AAAGAAAGGAGCACAGACCA+TGG + chr6_2:78504890-78504909 None:intergenic 45.0%
! ATGTTTGGGGCATGACTTTC+AGG - chr6_2:78504992-78505011 Msa0929690:five_prime_UTR 45.0%
TGGGTTCTTAAGCAAGCTTC+TGG - chr6_2:78505034-78505053 Msa0929690:intron 45.0%
AGGTTCTCCGTTTCAAGCAT+GGG - chr6_2:78505072-78505091 Msa0929690:intron 45.0%
GTAGGTGTTTCGGTATTCCT+TGG - chr6_2:78505189-78505208 Msa0929690:five_prime_UTR 45.0%
TCCAGAGATATCTTCCAAGC+TGG - chr6_2:78505275-78505294 Msa0929690:intron 45.0%
AGATGAAGGACCTACAGAAC+AGG - chr6_2:78505415-78505434 Msa0929690:five_prime_UTR 45.0%
ACAGGATGTTTCAACCGTAC+TGG - chr6_2:78505433-78505452 Msa0929690:five_prime_UTR 45.0%
!!! TGCATTTTGGTTTTCCCCGT+TGG - chr6_2:78505904-78505923 Msa0929690:intron 45.0%
!!! TTTGGTTTTCCCCGTTGGAA+AGG - chr6_2:78505909-78505928 Msa0929690:intron 45.0%
! TTTTCCCCGTTGGAAAGGAA+TGG - chr6_2:78505914-78505933 Msa0929690:intron 45.0%
! CGTCACCTTGAATCTGAAAC+AGG + chr6_2:78506464-78506483 None:intergenic 45.0%
CTTGGGCATAAGTATCACTG+CGG + chr6_2:78506577-78506596 None:intergenic 45.0%
AACTAAGAGCCAAAACTGCC+AGG + chr6_2:78506776-78506795 None:intergenic 45.0%
GTGCTCTTGATTCTTGATGC+GGG - chr6_2:78507194-78507213 Msa0929690:five_prime_UTR 45.0%
!! GGATCTCTGTGCCATTTGTT+TGG - chr6_2:78507215-78507234 Msa0929690:five_prime_UTR 45.0%
!! CAAAATAAAATAAAAAATTA+CGG + chr6_2:78499233-78499252 None:intergenic 5.0%
! AGACACAGAGTGGGAAGTGT+TGG - chr6_2:78495276-78495295 Msa0929690:three_prime_UTR 50.0%
! ATCGGAGTTGCTGCTTCTGA+TGG + chr6_2:78495342-78495361 None:intergenic 50.0%
AAGCAGCAACTCCGATCTCA+AGG - chr6_2:78495346-78495365 Msa0929690:three_prime_UTR 50.0%
GACTTCGGCACTCTCGATAA+CGG - chr6_2:78495444-78495463 Msa0929690:three_prime_UTR 50.0%
!! TCTCCAATCAGAAGTGTCGG+TGG + chr6_2:78495584-78495603 None:intergenic 50.0%
CAAGCCGGAATTGTTGTCTC+AGG - chr6_2:78495882-78495901 Msa0929690:CDS 50.0%
! GAGCTGTCATGGAAGAGTAC+AGG - chr6_2:78496359-78496378 Msa0929690:intron 50.0%
! GCTGTCATGGAAGAGTACAG+GGG - chr6_2:78496361-78496380 Msa0929690:intron 50.0%
GTTGGAATAGGTGGAGGATC+AGG + chr6_2:78496854-78496873 None:intergenic 50.0%
! GGTCATCATGTGATGGAACC+TGG + chr6_2:78496880-78496899 None:intergenic 50.0%
AACCGTGGGTCATCATGTGA+TGG + chr6_2:78496887-78496906 None:intergenic 50.0%
ATAGGGTGGATCCTTCCTAC+GGG + chr6_2:78497170-78497189 None:intergenic 50.0%
CTGATATGGGGCGAGTTCAA+AGG - chr6_2:78498103-78498122 Msa0929690:intron 50.0%
GATATGGGGCGAGTTCAAAG+GGG - chr6_2:78498105-78498124 Msa0929690:intron 50.0%
!! AGTTCTGGCTCGTACCTATG+TGG - chr6_2:78499306-78499325 Msa0929690:intron 50.0%
CATCCTAAACCGGCTATAGC+TGG - chr6_2:78499785-78499804 Msa0929690:intron 50.0%
! TGACCAGCTATAGCCGGTTT+AGG + chr6_2:78499791-78499810 None:intergenic 50.0%
! ACTGATTCAGTTGCCGGCAA+CGG + chr6_2:78499980-78499999 None:intergenic 50.0%
CATCCTAAACCGGCTATAGC+TGG - chr6_2:78499785-78499804 Msa0929690:intron 50.0%
! TGACCAGCTATAGCCGGTTT+AGG + chr6_2:78499791-78499810 None:intergenic 50.0%
! ACTGATTCAGTTGCCGGCAA+CGG + chr6_2:78499980-78499999 None:intergenic 50.0%
CATCCTAAACCGGCTATAGC+TGG - chr6_2:78499785-78499804 Msa0929690:intron 50.0%
! TGACCAGCTATAGCCGGTTT+AGG + chr6_2:78499791-78499810 None:intergenic 50.0%
GAAGATGATGCAAGGCTGAG+CGG + chr6_2:78500621-78500640 None:intergenic 50.0%
GGCGAAGTAAGAGTTAGCCA+TGG - chr6_2:78500928-78500947 Msa0929690:intron 50.0%
! TGTCTCGAGAGCGTACTGTA+TGG + chr6_2:78500960-78500979 None:intergenic 50.0%
GGGAACAAAGATCAGGGGTT+AGG + chr6_2:78501032-78501051 None:intergenic 50.0%
!! GGGATTGGCTAGGGCAAAAA+GGG + chr6_2:78501102-78501121 None:intergenic 50.0%
GTGTCCCAGAGGCAATTTGT+TGG - chr6_2:78501235-78501254 Msa0929690:intron 50.0%
AAGGTGATGAGTCGGTCTAG+AGG - chr6_2:78501264-78501283 Msa0929690:intron 50.0%
! CTAGAGGTTTAGGGCTTGGT+AGG - chr6_2:78501280-78501299 Msa0929690:intron 50.0%
! AGAGGTTTAGGGCTTGGTAG+GGG - chr6_2:78501282-78501301 Msa0929690:intron 50.0%
CCAATTTCCCCAGCAATGGT+CGG + chr6_2:78501868-78501887 None:intergenic 50.0%
CACACCAATTTCCCCAGCAA+TGG + chr6_2:78501872-78501891 None:intergenic 50.0%
GCTGGGGAAATTGGTGTGTT+TGG - chr6_2:78501874-78501893 Msa0929690:intron 50.0%
TGACTGTTCACCTTCAGACC+TGG - chr6_2:78501987-78502006 Msa0929690:intron 50.0%
TCACCTTCAGACCTGGAAAC+TGG - chr6_2:78501994-78502013 Msa0929690:intron 50.0%
AAGCCAGTTTCCAGGTCTGA+AGG + chr6_2:78502000-78502019 None:intergenic 50.0%
ATACCTGCAAGCCAGTTTCC+AGG + chr6_2:78502008-78502027 None:intergenic 50.0%
CTGATGTCTGTGCACAAGTG+TGG + chr6_2:78503465-78503484 None:intergenic 50.0%
CTTTGGTATTCCACCCTGCA+TGG + chr6_2:78504010-78504029 None:intergenic 50.0%
CAGGTTCTCCGTTTCAAGCA+TGG - chr6_2:78505071-78505090 Msa0929690:intron 50.0%
TCACCTGCCCATGCTTGAAA+CGG + chr6_2:78505082-78505101 None:intergenic 50.0%
GGTGTTTCGGTATTCCTTGG+CGG - chr6_2:78505192-78505211 Msa0929690:five_prime_UTR 50.0%
GCCAGCTTGGAAGATATCTC+TGG + chr6_2:78505279-78505298 None:intergenic 50.0%
! GAGCAAAGAGCGCATGAGAA+TGG - chr6_2:78505461-78505480 Msa0929690:five_prime_UTR 50.0%
!! AGCGCATGAGAATGGATTGC+AGG - chr6_2:78505469-78505488 Msa0929690:five_prime_UTR 50.0%
TGGATGAAAGGGATGGGTCA+TGG - chr6_2:78505669-78505688 Msa0929690:intron 50.0%
!! TTCAGATTCAAGGTGACGGG+CGG - chr6_2:78506466-78506485 Msa0929690:intron 50.0%
!! CTGTGCAGTTGATGGGGTAA+GGG + chr6_2:78506508-78506527 None:intergenic 50.0%
!! ACTGTGCAGTTGATGGGGTA+AGG + chr6_2:78506509-78506528 None:intergenic 50.0%
TACCCCATCAACTGCACAGT+TGG - chr6_2:78506509-78506528 Msa0929690:intron 50.0%
! TGCCAACTGTGCAGTTGATG+GGG + chr6_2:78506514-78506533 None:intergenic 50.0%
GTGCCAACTGTGCAGTTGAT+GGG + chr6_2:78506515-78506534 None:intergenic 50.0%
AGTGCCAACTGTGCAGTTGA+TGG + chr6_2:78506516-78506535 None:intergenic 50.0%
CACCGTTTGTTCGAGTGGAT+TGG + chr6_2:78506632-78506651 None:intergenic 50.0%
CAATCCACTCGAACAAACGG+TGG - chr6_2:78506630-78506649 Msa0929690:intron 50.0%
AAACGGTGGCAGAGAAGCAA+AGG - chr6_2:78506644-78506663 Msa0929690:intron 50.0%
TTTAGCTGGAATTGCTGGCC+TGG - chr6_2:78506755-78506774 Msa0929690:five_prime_UTR 50.0%
!! AATTGCTGGCCTGGCAGTTT+TGG - chr6_2:78506764-78506783 Msa0929690:five_prime_UTR 50.0%
TTGTGGAGACATTCACGCAG+TGG - chr6_2:78506795-78506814 Msa0929690:five_prime_UTR 50.0%
!! GAGTGGGAAGTGTTGGACTC+TGG - chr6_2:78495283-78495302 Msa0929690:three_prime_UTR 55.0%
! GAGGAGTTGGTTCATGTCGG+TGG + chr6_2:78495403-78495422 None:intergenic 55.0%
TGCAGCGAACGTAGTAGCGA+AGG + chr6_2:78495470-78495489 None:intergenic 55.0%
GAGCCACCGACACTTCTGAT+TGG - chr6_2:78495578-78495597 Msa0929690:three_prime_UTR 55.0%
! GTTGGTTCCCGTTGACAAGC+CGG - chr6_2:78495867-78495886 Msa0929690:CDS 55.0%
CAGGGGAAGCAGAAATGCCA+CGG - chr6_2:78496378-78496397 Msa0929690:intron 55.0%
AGGGGAAGCAGAAATGCCAC+GGG - chr6_2:78496379-78496398 Msa0929690:intron 55.0%
CCTCACGGTCTCAGGAGAAA+CGG + chr6_2:78496619-78496638 None:intergenic 55.0%
ATAGGTGGAGGATCAGGTGC+TGG + chr6_2:78496848-78496867 None:intergenic 55.0%
TCTCTGACATCAGCAGCGCA+CGG + chr6_2:78497465-78497484 None:intergenic 55.0%
TGAAGCAGAGGTGGGGAAGA+CGG + chr6_2:78499459-78499478 None:intergenic 55.0%
ACGCTCTCGAGACACTGTGA+CGG - chr6_2:78500966-78500985 Msa0929690:intron 55.0%
ACACTGTGACGGCAGCATCT+TGG - chr6_2:78500977-78500996 Msa0929690:intron 55.0%
CGGCAGCATCTTGGTTGCAT+TGG - chr6_2:78500986-78501005 Msa0929690:intron 55.0%
AAAACATAGGGGACTGGGGG+AGG + chr6_2:78501061-78501080 None:intergenic 55.0%
!! GGGGATTGGCTAGGGCAAAA+AGG + chr6_2:78501103-78501122 None:intergenic 55.0%
! CGGTCTAGAGGTTTAGGGCT+TGG - chr6_2:78501276-78501295 Msa0929690:intron 55.0%
TCAATGGGACCGACCATTGC+TGG - chr6_2:78501856-78501875 Msa0929690:intron 55.0%
CAATGGGACCGACCATTGCT+GGG - chr6_2:78501857-78501876 Msa0929690:intron 55.0%
AATGGGACCGACCATTGCTG+GGG - chr6_2:78501858-78501877 Msa0929690:intron 55.0%
CCGACCATTGCTGGGGAAAT+TGG - chr6_2:78501865-78501884 Msa0929690:intron 55.0%
GCTGGCAAGAGAGCTGAAGT+CGG - chr6_2:78501928-78501947 Msa0929690:intron 55.0%
GCTGAAGTCGGCACCAAGAT+TGG - chr6_2:78501940-78501959 Msa0929690:intron 55.0%
!! AGACCTGGAAACTGGCTTGC+AGG - chr6_2:78502002-78502021 Msa0929690:intron 55.0%
! GTCTGCTGCCTTTTGGCAAG+TGG + chr6_2:78503956-78503975 None:intergenic 55.0%
AGAAGTGGTCCGAAGTCCCA+TGG - chr6_2:78504810-78504829 Msa0929690:five_prime_UTR 55.0%
GTGCTTCCACCATGGGACTT+CGG + chr6_2:78504822-78504841 None:intergenic 55.0%
GTCCCATTCTTCAGCTCCAC+AGG + chr6_2:78504868-78504887 None:intergenic 55.0%
GGAGCTGAAGAATGGGACCA+TGG - chr6_2:78504870-78504889 Msa0929690:intron 55.0%
TCTCCGTTTCAAGCATGGGC+AGG - chr6_2:78505076-78505095 Msa0929690:intron 55.0%
ATGGAGGAGACTTGCCAGCT+TGG + chr6_2:78505292-78505311 None:intergenic 55.0%
TCTGCCACCGTTTGTTCGAG+TGG + chr6_2:78506637-78506656 None:intergenic 55.0%
!! CGGGTTGGTCAGAGAGGAGT+TGG + chr6_2:78495416-78495435 None:intergenic 60.0%
CTCCTCTCTGACCAACCCGT+CGG - chr6_2:78495417-78495436 Msa0929690:three_prime_UTR 60.0%
AGCGGCTCTCATGCGTGGTT+TGG + chr6_2:78495496-78495515 None:intergenic 60.0%
TCTGACGGCGAGTGCAAGAG+CGG + chr6_2:78495514-78495533 None:intergenic 60.0%
CTTGCACTCGCCGTCAGAGT+CGG - chr6_2:78495516-78495535 Msa0929690:three_prime_UTR 60.0%
TTGCACTCGCCGTCAGAGTC+GGG - chr6_2:78495517-78495536 Msa0929690:three_prime_UTR 60.0%
GGGGAAGCAGAAATGCCACG+GGG - chr6_2:78496380-78496399 Msa0929690:intron 60.0%
GAAGCAGAAATGCCACGGGG+AGG - chr6_2:78496383-78496402 Msa0929690:intron 60.0%
GGAGGCTGCAGGATGCTCAT+TGG - chr6_2:78496401-78496420 Msa0929690:intron 60.0%
CCGTTTCTCCTGAGACCGTG+AGG - chr6_2:78496616-78496635 Msa0929690:intron 60.0%
GTTGCTAGGGTGCGGCTTCA+TGG - chr6_2:78497412-78497431 Msa0929690:five_prime_UTR 60.0%
GGCAAATGTTCGGGGCTCCA+TGG + chr6_2:78497882-78497901 None:intergenic 60.0%
CTCGGAGACTTCACCGTTGC+CGG - chr6_2:78499964-78499983 Msa0929690:intron 60.0%
CTCGGAGACTTCACCGTTGC+CGG - chr6_2:78499964-78499983 Msa0929690:intron 60.0%
CTCGGAGACTTCACCGTTGC+CGG - chr6_2:78499964-78499983 Msa0929690:intron 60.0%
GACTTCACCGTTGCCGGCAA+CGG - chr6_2:78499970-78499989 Msa0929690:intron 60.0%
GGTGTAACCGTTGCCGGCAA+CGG + chr6_2:78500588-78500607 None:intergenic 60.0%
! GGTGAGGGTGTAACCGTTGC+CGG + chr6_2:78500594-78500613 None:intergenic 60.0%
GATGATGCAAGGCTGAGCGG+AGG + chr6_2:78500618-78500637 None:intergenic 60.0%
AGTGGTCCGAAGTCCCATGG+TGG - chr6_2:78504813-78504832 Msa0929690:five_prime_UTR 60.0%
!! CAACCCGTCGGCGTCGACTT+CGG - chr6_2:78495429-78495448 Msa0929690:three_prime_UTR 65.0%
! AGTGCCGAAGTCGACGCCGA+CGG + chr6_2:78495436-78495455 None:intergenic 65.0%
GCAAGAGCGGCTCTCATGCG+TGG + chr6_2:78495501-78495520 None:intergenic 65.0%
AAATGCCACGGGGAGGCTGC+AGG - chr6_2:78496390-78496409 Msa0929690:intron 65.0%
CGGCAACGGTGAAGTCTCCG+AGG + chr6_2:78499966-78499985 None:intergenic 65.0%
CGGCAACGGTGAAGTCTCCG+AGG + chr6_2:78499966-78499985 None:intergenic 65.0%
CGGCAACGGTGAAGTCTCCG+AGG + chr6_2:78499966-78499985 None:intergenic 65.0%
AGGCTGAGCGGAGGTGGTGA+GGG + chr6_2:78500609-78500628 None:intergenic 65.0%
AAGGCTGAGCGGAGGTGGTG+AGG + chr6_2:78500610-78500629 None:intergenic 65.0%
GATGCAAGGCTGAGCGGAGG+TGG + chr6_2:78500615-78500634 None:intergenic 65.0%
GGGACTGGGGGAGGAAGAAC+GGG + chr6_2:78501052-78501071 None:intergenic 65.0%
GGGGACTGGGGGAGGAAGAA+CGG + chr6_2:78501053-78501072 None:intergenic 65.0%
CCGCTCATCGGACCGCTCAT+CGG + chr6_2:78501696-78501715 None:intergenic 65.0%
CCGATGAGCGGTCCGATGAG+CGG - chr6_2:78501693-78501712 Msa0929690:intron 65.0%
!! CGCCGACGGGTTGGTCAGAG+AGG + chr6_2:78495422-78495441 None:intergenic 70.0%
CGAAGTCGACGCCGACGGGT+TGG + chr6_2:78495431-78495450 None:intergenic 70.0%
GTGCCGAAGTCGACGCCGAC+GGG + chr6_2:78495435-78495454 None:intergenic 70.0%
AGCATCCTGCAGCCTCCCCG+TGG + chr6_2:78496398-78496417 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 78495226 78507430 78495226 ID=Msa0929690;Name=Msa0929690
chr6_2 mRNA 78495226 78507430 78495226 ID=Msa0929690-mRNA-1;Parent=Msa0929690;Name=Msa0929690-mRNA-1;_AED=0.09;_eAED=0.09;_QI=2716|1|1|1|1|0.95|20|570|176
chr6_2 exon 78495226 78495903 78495226 ID=Msa0929690-mRNA-1:exon:13217;Parent=Msa0929690-mRNA-1
chr6_2 exon 78495991 78496185 78495991 ID=Msa0929690-mRNA-1:exon:13216;Parent=Msa0929690-mRNA-1
chr6_2 exon 78496833 78496913 78496833 ID=Msa0929690-mRNA-1:exon:13215;Parent=Msa0929690-mRNA-1
chr6_2 exon 78497166 78497476 78497166 ID=Msa0929690-mRNA-1:exon:13214;Parent=Msa0929690-mRNA-1
chr6_2 exon 78497559 78497642 78497559 ID=Msa0929690-mRNA-1:exon:13213;Parent=Msa0929690-mRNA-1
chr6_2 exon 78497765 78497846 78497765 ID=Msa0929690-mRNA-1:exon:13212;Parent=Msa0929690-mRNA-1
chr6_2 exon 78498550 78498641 78498550 ID=Msa0929690-mRNA-1:exon:13211;Parent=Msa0929690-mRNA-1
chr6_2 exon 78498716 78498865 78498716 ID=Msa0929690-mRNA-1:exon:13210;Parent=Msa0929690-mRNA-1
chr6_2 exon 78498945 78499109 78498945 ID=Msa0929690-mRNA-1:exon:13209;Parent=Msa0929690-mRNA-1
chr6_2 exon 78500633 78500866 78500633 ID=Msa0929690-mRNA-1:exon:13208;Parent=Msa0929690-mRNA-1
chr6_2 exon 78503826 78503931 78503826 ID=Msa0929690-mRNA-1:exon:13207;Parent=Msa0929690-mRNA-1
chr6_2 exon 78504633 78504846 78504633 ID=Msa0929690-mRNA-1:exon:13206;Parent=Msa0929690-mRNA-1
chr6_2 exon 78504952 78505021 78504952 ID=Msa0929690-mRNA-1:exon:13205;Parent=Msa0929690-mRNA-1
chr6_2 exon 78505107 78505244 78505107 ID=Msa0929690-mRNA-1:exon:13204;Parent=Msa0929690-mRNA-1
chr6_2 exon 78505353 78505610 78505353 ID=Msa0929690-mRNA-1:exon:13203;Parent=Msa0929690-mRNA-1
chr6_2 exon 78505719 78505853 78505719 ID=Msa0929690-mRNA-1:exon:13202;Parent=Msa0929690-mRNA-1
chr6_2 exon 78505946 78506083 78505946 ID=Msa0929690-mRNA-1:exon:13201;Parent=Msa0929690-mRNA-1
chr6_2 exon 78506209 78506334 78506209 ID=Msa0929690-mRNA-1:exon:13200;Parent=Msa0929690-mRNA-1
chr6_2 exon 78506720 78506966 78506720 ID=Msa0929690-mRNA-1:exon:13199;Parent=Msa0929690-mRNA-1
chr6_2 exon 78507118 78507430 78507118 ID=Msa0929690-mRNA-1:exon:13198;Parent=Msa0929690-mRNA-1
chr6_2 five_prime_UTR 78507118 78507430 78507118 ID=Msa0929690-mRNA-1:five_prime_utr;Parent=Msa0929690-mRNA-1
chr6_2 five_prime_UTR 78506720 78506966 78506720 ID=Msa0929690-mRNA-1:five_prime_utr;Parent=Msa0929690-mRNA-1
chr6_2 five_prime_UTR 78506209 78506334 78506209 ID=Msa0929690-mRNA-1:five_prime_utr;Parent=Msa0929690-mRNA-1
chr6_2 five_prime_UTR 78505946 78506083 78505946 ID=Msa0929690-mRNA-1:five_prime_utr;Parent=Msa0929690-mRNA-1
chr6_2 five_prime_UTR 78505719 78505853 78505719 ID=Msa0929690-mRNA-1:five_prime_utr;Parent=Msa0929690-mRNA-1
chr6_2 five_prime_UTR 78505353 78505610 78505353 ID=Msa0929690-mRNA-1:five_prime_utr;Parent=Msa0929690-mRNA-1
chr6_2 five_prime_UTR 78505107 78505244 78505107 ID=Msa0929690-mRNA-1:five_prime_utr;Parent=Msa0929690-mRNA-1
chr6_2 five_prime_UTR 78504952 78505021 78504952 ID=Msa0929690-mRNA-1:five_prime_utr;Parent=Msa0929690-mRNA-1
chr6_2 five_prime_UTR 78504633 78504846 78504633 ID=Msa0929690-mRNA-1:five_prime_utr;Parent=Msa0929690-mRNA-1
chr6_2 five_prime_UTR 78503826 78503931 78503826 ID=Msa0929690-mRNA-1:five_prime_utr;Parent=Msa0929690-mRNA-1
chr6_2 five_prime_UTR 78500633 78500866 78500633 ID=Msa0929690-mRNA-1:five_prime_utr;Parent=Msa0929690-mRNA-1
chr6_2 five_prime_UTR 78498945 78499109 78498945 ID=Msa0929690-mRNA-1:five_prime_utr;Parent=Msa0929690-mRNA-1
chr6_2 five_prime_UTR 78498716 78498865 78498716 ID=Msa0929690-mRNA-1:five_prime_utr;Parent=Msa0929690-mRNA-1
chr6_2 five_prime_UTR 78498550 78498641 78498550 ID=Msa0929690-mRNA-1:five_prime_utr;Parent=Msa0929690-mRNA-1
chr6_2 five_prime_UTR 78497765 78497846 78497765 ID=Msa0929690-mRNA-1:five_prime_utr;Parent=Msa0929690-mRNA-1
chr6_2 five_prime_UTR 78497559 78497642 78497559 ID=Msa0929690-mRNA-1:five_prime_utr;Parent=Msa0929690-mRNA-1
chr6_2 five_prime_UTR 78497313 78497476 78497313 ID=Msa0929690-mRNA-1:five_prime_utr;Parent=Msa0929690-mRNA-1
chr6_2 CDS 78497166 78497312 78497166 ID=Msa0929690-mRNA-1:cds;Parent=Msa0929690-mRNA-1
chr6_2 CDS 78496833 78496913 78496833 ID=Msa0929690-mRNA-1:cds;Parent=Msa0929690-mRNA-1
chr6_2 CDS 78495991 78496185 78495991 ID=Msa0929690-mRNA-1:cds;Parent=Msa0929690-mRNA-1
chr6_2 CDS 78495796 78495903 78495796 ID=Msa0929690-mRNA-1:cds;Parent=Msa0929690-mRNA-1
chr6_2 three_prime_UTR 78495226 78495795 78495226 ID=Msa0929690-mRNA-1:three_prime_utr;Parent=Msa0929690-mRNA-1
Gene Sequence

>Msa0929690

ATGGTGAAAAATTACTGTCTTGTAAATCATTTACAGGTTGATATTGCTTTGGATGAAATGTTGCGTCTTCAAGATGAAGGACCTACAGAACAGGATGTTTCAACCGTACTGGAAATTGAGCAAAGAGCGCATGAGAATGGATTGCAGGAAAATTATTACTGGCTGGACCGGATTTTACATAGCTACCAATCAAGAGTCTATTCTGGTGATGTTGGCACTTCTTTTGAGATTCAAGGTGACGGGCGGTCAAAAGTCAGATCATCCCTTACCCCATCAACTGCACAGTTGGCACTACAAAGAATATTGCCTTATCCTTGTAAAAAACAGTATACCGCAGTGATACTTATGCCCAAGTCTTCTCCTTTTAAATTCCTGAAATCAGTATTCCAATCCACTCGAACAAACGGTGGCAGAGAAGCAAAGATTTTAGCTGGAATTGCTGGCCTGGCAGTTTTGGCTCTTAGTTTGTGGAGACATTCACGCAGTGGCCATATTAATAACAGACATTTACTTGGCAGTGCTACAAAGTAG
Protein sequence

>Msa0929690

MVKNYCLVNHLQVDIALDEMLRLQDEGPTEQDVSTVLEIEQRAHENGLQENYYWLDRILHSYQSRVYSGDVGTSFEIQGDGRSKVRSSLTPSTAQLALQRILPYPCKKQYTAVILMPKSSPFKFLKSVFQSTRTNGGREAKILAGIAGLAVLALSLWRHSRSGHINNRHLLGSATK*