Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0573860 | XP_003630724.2 | 95.719 | 327 | 14 | 0 | 1 | 327 | 23 | 349 | 0.0 | 659 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0573860 | sp|C8VK14|HXNY_EMENI | 37.025 | 316 | 173 | 11 | 26 | 327 | 26 | 329 | 3.36e-55 | 186 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0573860 | A0A396GYA2 | 95.719 | 327 | 14 | 0 | 1 | 327 | 23 | 349 | 0.0 | 659 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0573860 | Msa0574640 | 0.814641 | 1.389462e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0573860 | MtrunA17_Chr8g0389941 | 95.719 | 327 | 14 | 0 | 1 | 327 | 23 | 349 | 0.0 | 659 |
Msa0573860 | MtrunA17_Chr6g0486831 | 73.373 | 338 | 79 | 2 | 1 | 327 | 1 | 338 | 0.0 | 527 |
Msa0573860 | MtrunA17_Chr4g0055911 | 49.026 | 308 | 148 | 4 | 12 | 318 | 9 | 308 | 4.20e-108 | 318 |
Msa0573860 | MtrunA17_Chr4g0055871 | 46.688 | 317 | 149 | 6 | 12 | 327 | 9 | 306 | 3.20e-103 | 305 |
Msa0573860 | MtrunA17_Chr4g0053251 | 34.185 | 313 | 177 | 12 | 19 | 320 | 28 | 322 | 3.16e-40 | 143 |
Msa0573860 | MtrunA17_Chr4g0045411 | 31.987 | 297 | 186 | 8 | 21 | 315 | 49 | 331 | 1.85e-39 | 142 |
Msa0573860 | MtrunA17_Chr1g0162321 | 32.390 | 318 | 198 | 11 | 16 | 327 | 83 | 389 | 2.63e-37 | 137 |
Msa0573860 | MtrunA17_Chr1g0162351 | 32.390 | 318 | 198 | 11 | 16 | 327 | 83 | 389 | 3.01e-37 | 137 |
Msa0573860 | MtrunA17_Chr1g0162361 | 31.613 | 310 | 186 | 11 | 14 | 313 | 29 | 322 | 1.99e-35 | 131 |
Msa0573860 | MtrunA17_Chr4g0045441 | 32.602 | 319 | 178 | 14 | 15 | 313 | 29 | 330 | 4.71e-35 | 130 |
Msa0573860 | MtrunA17_Chr3g0113641 | 30.945 | 307 | 183 | 10 | 11 | 309 | 52 | 337 | 1.03e-34 | 129 |
Msa0573860 | MtrunA17_Chr4g0045431 | 29.841 | 315 | 177 | 9 | 22 | 317 | 45 | 334 | 2.27e-34 | 128 |
Msa0573860 | MtrunA17_Chr5g0437181 | 30.526 | 285 | 174 | 9 | 29 | 309 | 72 | 336 | 7.91e-34 | 127 |
Msa0573860 | MtrunA17_Chr4g0045451 | 30.492 | 305 | 193 | 11 | 16 | 313 | 38 | 330 | 1.03e-32 | 124 |
Msa0573860 | MtrunA17_Chr5g0426891 | 31.359 | 287 | 167 | 7 | 29 | 310 | 62 | 323 | 1.17e-32 | 124 |
Msa0573860 | MtrunA17_Chr4g0045471 | 29.730 | 296 | 187 | 9 | 26 | 313 | 49 | 331 | 1.31e-31 | 121 |
Msa0573860 | MtrunA17_Chr1g0184151 | 31.532 | 333 | 192 | 14 | 4 | 325 | 31 | 338 | 3.80e-31 | 119 |
Msa0573860 | MtrunA17_Chr7g0239101 | 28.701 | 331 | 198 | 13 | 1 | 321 | 51 | 353 | 1.33e-30 | 119 |
Msa0573860 | MtrunA17_Chr7g0239111 | 31.325 | 332 | 187 | 15 | 5 | 321 | 48 | 353 | 5.27e-30 | 117 |
Msa0573860 | MtrunA17_Chr7g0242551 | 31.379 | 290 | 166 | 11 | 29 | 309 | 77 | 342 | 9.57e-30 | 116 |
Msa0573860 | MtrunA17_Chr4g0006371 | 29.630 | 297 | 174 | 12 | 23 | 309 | 79 | 350 | 1.82e-29 | 115 |
Msa0573860 | MtrunA17_Chr8g0348951 | 28.289 | 304 | 199 | 8 | 12 | 313 | 10 | 296 | 4.59e-29 | 114 |
Msa0573860 | MtrunA17_Chr8g0375601 | 28.754 | 313 | 190 | 12 | 12 | 312 | 48 | 339 | 4.58e-28 | 112 |
Msa0573860 | MtrunA17_Chr8g0345831 | 29.139 | 302 | 184 | 11 | 29 | 322 | 62 | 341 | 7.06e-28 | 111 |
Msa0573860 | MtrunA17_Chr1g0184101 | 27.937 | 315 | 197 | 11 | 11 | 320 | 40 | 329 | 1.34e-27 | 110 |
Msa0573860 | MtrunA17_Chr1g0148771 | 30.492 | 305 | 180 | 12 | 15 | 315 | 66 | 342 | 1.71e-27 | 110 |
Msa0573860 | MtrunA17_Chr3g0114861 | 29.373 | 303 | 192 | 9 | 15 | 314 | 43 | 326 | 3.69e-27 | 108 |
Msa0573860 | MtrunA17_Chr3g0121141 | 29.739 | 306 | 182 | 12 | 11 | 311 | 6 | 283 | 6.79e-27 | 107 |
Msa0573860 | MtrunA17_Chr5g0424201 | 29.801 | 302 | 187 | 10 | 14 | 310 | 46 | 327 | 7.58e-27 | 108 |
Msa0573860 | MtrunA17_Chr7g0247741 | 27.338 | 278 | 184 | 6 | 37 | 313 | 36 | 296 | 1.52e-26 | 107 |
Msa0573860 | MtrunA17_Chr8g0370711 | 28.618 | 304 | 189 | 13 | 11 | 309 | 54 | 334 | 1.72e-26 | 107 |
Msa0573860 | MtrunA17_Chr1g0184161 | 27.812 | 320 | 200 | 10 | 4 | 316 | 31 | 326 | 2.16e-26 | 107 |
Msa0573860 | MtrunA17_Chr2g0296371 | 29.739 | 306 | 179 | 15 | 29 | 327 | 73 | 349 | 3.37e-26 | 106 |
Msa0573860 | MtrunA17_Chr5g0412671 | 28.391 | 317 | 183 | 11 | 15 | 314 | 41 | 330 | 3.48e-26 | 106 |
Msa0573860 | MtrunA17_Chr2g0314381 | 26.804 | 291 | 187 | 9 | 29 | 313 | 98 | 368 | 5.48e-26 | 106 |
Msa0573860 | MtrunA17_Chr7g0239121 | 30.994 | 342 | 177 | 18 | 1 | 321 | 47 | 350 | 5.51e-26 | 106 |
Msa0573860 | MtrunA17_Chr1g0184121 | 27.469 | 324 | 206 | 11 | 4 | 321 | 30 | 330 | 7.68e-26 | 105 |
Msa0573860 | MtrunA17_Chr8g0371931 | 28.990 | 307 | 183 | 11 | 12 | 307 | 44 | 326 | 1.31e-25 | 105 |
Msa0573860 | MtrunA17_Chr3g0109041 | 28.302 | 318 | 199 | 12 | 10 | 316 | 40 | 339 | 1.56e-25 | 104 |
Msa0573860 | MtrunA17_Chr3g0128001 | 30.182 | 275 | 168 | 11 | 15 | 286 | 41 | 294 | 1.74e-25 | 104 |
Msa0573860 | MtrunA17_Chr8g0336861 | 26.752 | 314 | 203 | 10 | 12 | 320 | 65 | 356 | 2.24e-25 | 104 |
Msa0573860 | MtrunA17_Chr3g0126741 | 28.571 | 301 | 182 | 10 | 26 | 320 | 79 | 352 | 2.30e-25 | 104 |
Msa0573860 | MtrunA17_Chr8g0336751 | 27.241 | 290 | 184 | 8 | 26 | 311 | 113 | 379 | 2.45e-25 | 105 |
Msa0573860 | MtrunA17_Chr2g0289341 | 28.664 | 307 | 179 | 13 | 15 | 310 | 7 | 284 | 4.08e-25 | 103 |
Msa0573860 | MtrunA17_Chr1g0184111 | 26.498 | 317 | 209 | 8 | 5 | 318 | 33 | 328 | 4.16e-25 | 103 |
Msa0573860 | MtrunA17_Chr2g0311701 | 27.244 | 312 | 172 | 10 | 23 | 314 | 85 | 361 | 5.38e-25 | 103 |
Msa0573860 | MtrunA17_Chr8g0375571 | 29.000 | 300 | 183 | 13 | 24 | 315 | 63 | 340 | 5.81e-25 | 103 |
Msa0573860 | MtrunA17_Chr7g0265221 | 26.101 | 318 | 194 | 7 | 11 | 311 | 69 | 362 | 1.03e-24 | 103 |
Msa0573860 | MtrunA17_Chr3g0102041 | 27.986 | 293 | 176 | 11 | 27 | 308 | 59 | 327 | 1.07e-24 | 102 |
Msa0573860 | MtrunA17_Chr3g0092531 | 29.392 | 296 | 175 | 10 | 29 | 318 | 30 | 297 | 1.25e-24 | 101 |
Msa0573860 | MtrunA17_Chr8g0375671 | 27.891 | 294 | 184 | 12 | 29 | 315 | 75 | 347 | 1.43e-24 | 102 |
Msa0573860 | MtrunA17_Chr5g0412681 | 26.537 | 309 | 191 | 12 | 15 | 314 | 36 | 317 | 1.89e-24 | 101 |
Msa0573860 | MtrunA17_Chr5g0420941 | 29.553 | 291 | 169 | 12 | 29 | 310 | 64 | 327 | 2.15e-24 | 101 |
Msa0573860 | MtrunA17_Chr1g0162191 | 30.282 | 284 | 174 | 8 | 29 | 309 | 68 | 330 | 2.19e-24 | 101 |
Msa0573860 | MtrunA17_Chr7g0220001 | 29.167 | 288 | 170 | 11 | 7 | 286 | 36 | 297 | 2.58e-24 | 101 |
Msa0573860 | MtrunA17_Chr5g0423201 | 28.720 | 289 | 175 | 12 | 29 | 310 | 66 | 330 | 3.05e-24 | 101 |
Msa0573860 | MtrunA17_Chr5g0423191 | 27.211 | 294 | 186 | 11 | 29 | 315 | 66 | 338 | 3.98e-24 | 100 |
Msa0573860 | MtrunA17_Chr8g0336851 | 25.817 | 306 | 197 | 9 | 12 | 311 | 65 | 346 | 4.22e-24 | 100 |
Msa0573860 | MtrunA17_Chr4g0050031 | 28.819 | 288 | 174 | 9 | 29 | 310 | 85 | 347 | 4.24e-24 | 100 |
Msa0573860 | MtrunA17_Chr1g0179801 | 26.282 | 312 | 195 | 7 | 11 | 311 | 68 | 355 | 5.30e-24 | 100 |
Msa0573860 | MtrunA17_Chr6g0455481 | 26.769 | 325 | 197 | 11 | 2 | 314 | 32 | 327 | 5.58e-24 | 100 |
Msa0573860 | MtrunA17_Chr2g0314391 | 27.778 | 288 | 186 | 10 | 29 | 314 | 91 | 358 | 7.11e-24 | 100 |
Msa0573860 | MtrunA17_Chr1g0187831 | 26.935 | 323 | 201 | 10 | 6 | 317 | 64 | 362 | 7.14e-24 | 100 |
Msa0573860 | MtrunA17_Chr5g0423251 | 27.397 | 292 | 172 | 9 | 29 | 309 | 66 | 328 | 7.31e-24 | 100 |
Msa0573860 | MtrunA17_Chr5g0439011 | 29.897 | 291 | 167 | 13 | 29 | 310 | 25 | 287 | 8.19e-24 | 99.4 |
Msa0573860 | MtrunA17_Chr3g0093751 | 26.032 | 315 | 205 | 10 | 7 | 318 | 54 | 343 | 1.09e-23 | 99.8 |
Msa0573860 | MtrunA17_Chr3g0125201 | 28.479 | 309 | 185 | 10 | 14 | 311 | 5 | 288 | 1.18e-23 | 99.0 |
Msa0573860 | MtrunA17_Chr2g0332191 | 26.667 | 315 | 201 | 11 | 8 | 315 | 48 | 339 | 1.41e-23 | 99.8 |
Msa0573860 | MtrunA17_Chr8g0371921 | 27.740 | 292 | 176 | 9 | 27 | 307 | 59 | 326 | 1.48e-23 | 99.8 |
Msa0573860 | MtrunA17_Chr5g0412651 | 24.224 | 322 | 209 | 8 | 12 | 323 | 43 | 339 | 1.51e-23 | 99.4 |
Msa0573860 | MtrunA17_Chr3g0093741 | 24.159 | 327 | 196 | 9 | 7 | 318 | 54 | 343 | 1.77e-23 | 99.4 |
Msa0573860 | MtrunA17_Chr4g0045461 | 26.688 | 311 | 196 | 10 | 16 | 313 | 38 | 329 | 2.35e-23 | 99.0 |
Msa0573860 | MtrunA17_Chr5g0405411 | 28.146 | 302 | 186 | 12 | 15 | 307 | 47 | 326 | 2.41e-23 | 99.0 |
Msa0573860 | MtrunA17_Chr3g0093761 | 25.312 | 320 | 200 | 11 | 7 | 318 | 54 | 342 | 2.85e-23 | 98.6 |
Msa0573860 | MtrunA17_Chr5g0420901 | 27.869 | 305 | 194 | 11 | 12 | 311 | 46 | 329 | 3.02e-23 | 98.6 |
Msa0573860 | MtrunA17_Chr8g0336781 | 27.213 | 305 | 195 | 10 | 12 | 311 | 100 | 382 | 3.25e-23 | 99.0 |
Msa0573860 | MtrunA17_Chr7g0239071 | 29.866 | 298 | 162 | 13 | 41 | 321 | 31 | 298 | 5.08e-23 | 97.1 |
Msa0573860 | MtrunA17_Chr8g0348081 | 26.490 | 302 | 194 | 8 | 15 | 311 | 68 | 346 | 6.38e-23 | 97.8 |
Msa0573860 | MtrunA17_Chr1g0191201 | 27.215 | 316 | 191 | 12 | 19 | 320 | 65 | 355 | 8.62e-23 | 97.4 |
Msa0573860 | MtrunA17_Chr7g0265351 | 26.769 | 325 | 202 | 11 | 3 | 318 | 29 | 326 | 8.86e-23 | 97.1 |
Msa0573860 | MtrunA17_Chr2g0314401 | 26.246 | 301 | 174 | 10 | 29 | 314 | 72 | 339 | 1.17e-22 | 97.1 |
Msa0573860 | MtrunA17_Chr8g0375681 | 28.315 | 279 | 172 | 11 | 41 | 312 | 15 | 272 | 1.26e-22 | 95.9 |
Msa0573860 | MtrunA17_Chr7g0250511 | 28.435 | 313 | 181 | 10 | 12 | 310 | 49 | 332 | 1.27e-22 | 96.7 |
Msa0573860 | MtrunA17_Chr2g0311831 | 25.559 | 313 | 201 | 8 | 8 | 311 | 64 | 353 | 1.38e-22 | 97.1 |
Msa0573860 | MtrunA17_Chr8g0370721 | 27.362 | 307 | 195 | 13 | 11 | 312 | 54 | 337 | 1.63e-22 | 96.7 |
Msa0573860 | MtrunA17_Chr2g0311741 | 27.778 | 306 | 176 | 12 | 23 | 316 | 43 | 315 | 1.97e-22 | 95.9 |
Msa0573860 | MtrunA17_Chr5g0421041 | 26.367 | 311 | 199 | 12 | 14 | 315 | 47 | 336 | 2.64e-22 | 95.9 |
Msa0573860 | MtrunA17_Chr2g0311681 | 27.331 | 311 | 171 | 11 | 23 | 313 | 79 | 354 | 2.65e-22 | 96.3 |
Msa0573860 | MtrunA17_Chr2g0311691 | 27.653 | 311 | 170 | 11 | 23 | 313 | 79 | 354 | 2.96e-22 | 95.9 |
Msa0573860 | MtrunA17_Chr1g0204181 | 26.647 | 334 | 208 | 12 | 7 | 321 | 47 | 362 | 3.55e-22 | 95.9 |
Msa0573860 | MtrunA17_Chr5g0423221 | 27.273 | 308 | 183 | 13 | 21 | 320 | 89 | 363 | 4.11e-22 | 95.5 |
Msa0573860 | MtrunA17_Chr6g0472861 | 26.667 | 255 | 164 | 6 | 26 | 278 | 86 | 319 | 6.26e-22 | 95.1 |
Msa0573860 | MtrunA17_Chr8g0384461 | 24.917 | 301 | 196 | 9 | 28 | 320 | 69 | 347 | 6.72e-22 | 94.7 |
Msa0573860 | MtrunA17_Chr8g0336761 | 25.828 | 302 | 196 | 9 | 15 | 311 | 68 | 346 | 7.94e-22 | 94.7 |
Msa0573860 | MtrunA17_Chr8g0358941 | 27.619 | 315 | 188 | 12 | 15 | 317 | 30 | 316 | 1.11e-21 | 94.0 |
Msa0573860 | MtrunA17_Chr5g0421011 | 26.689 | 296 | 179 | 9 | 29 | 314 | 66 | 333 | 1.17e-21 | 94.0 |
Msa0573860 | MtrunA17_Chr2g0311761 | 25.392 | 319 | 205 | 9 | 8 | 316 | 64 | 359 | 1.21e-21 | 94.4 |
Msa0573860 | MtrunA17_Chr7g0220011 | 27.586 | 319 | 186 | 14 | 2 | 310 | 36 | 319 | 1.44e-21 | 93.6 |
Msa0573860 | MtrunA17_Chr8g0375701 | 27.397 | 292 | 171 | 9 | 29 | 309 | 74 | 335 | 1.74e-21 | 93.6 |
Msa0573860 | MtrunA17_Chr5g0423211 | 27.937 | 315 | 183 | 12 | 12 | 311 | 47 | 332 | 2.22e-21 | 93.2 |
Msa0573860 | MtrunA17_Chr3g0125421 | 28.523 | 298 | 189 | 9 | 19 | 310 | 49 | 328 | 2.62e-21 | 93.2 |
Msa0573860 | MtrunA17_Chr3g0130391 | 25.743 | 303 | 207 | 9 | 22 | 321 | 82 | 369 | 4.23e-21 | 92.8 |
Msa0573860 | MtrunA17_Chr4g0064781 | 28.269 | 283 | 178 | 10 | 2 | 280 | 40 | 301 | 5.91e-21 | 92.0 |
Msa0573860 | MtrunA17_Chr2g0311921 | 26.582 | 316 | 197 | 12 | 7 | 311 | 49 | 340 | 8.63e-21 | 91.7 |
Msa0573860 | MtrunA17_Chr8g0351101 | 25.733 | 307 | 199 | 9 | 22 | 320 | 70 | 355 | 1.55e-20 | 91.3 |
Msa0573860 | MtrunA17_Chr8g0365241 | 25.952 | 289 | 186 | 12 | 32 | 313 | 80 | 347 | 1.96e-20 | 90.9 |
Msa0573860 | MtrunA17_Chr8g0336631 | 24.771 | 327 | 175 | 9 | 12 | 311 | 65 | 347 | 2.76e-20 | 90.5 |
Msa0573860 | MtrunA17_Chr2g0313111 | 27.758 | 281 | 176 | 10 | 15 | 291 | 31 | 288 | 3.04e-20 | 89.7 |
Msa0573860 | MtrunA17_Chr5g0424211 | 26.974 | 304 | 171 | 8 | 15 | 299 | 45 | 316 | 3.76e-20 | 89.7 |
Msa0573860 | MtrunA17_Chr5g0394071 | 33.514 | 185 | 102 | 7 | 137 | 320 | 5 | 169 | 4.26e-20 | 86.3 |
Msa0573860 | MtrunA17_Chr7g0266651 | 28.481 | 316 | 179 | 13 | 15 | 316 | 62 | 344 | 6.56e-20 | 89.4 |
Msa0573860 | MtrunA17_Chr5g0421091 | 26.846 | 298 | 171 | 12 | 29 | 311 | 64 | 329 | 6.82e-20 | 89.0 |
Msa0573860 | MtrunA17_Chr5g0420951 | 25.658 | 304 | 187 | 14 | 32 | 322 | 76 | 353 | 8.21e-20 | 89.0 |
Msa0573860 | MtrunA17_Chr2g0311631 | 24.528 | 318 | 201 | 10 | 15 | 318 | 58 | 350 | 1.23e-19 | 88.6 |
Msa0573860 | MtrunA17_Chr5g0420981 | 25.080 | 311 | 208 | 12 | 3 | 310 | 48 | 336 | 1.31e-19 | 88.2 |
Msa0573860 | MtrunA17_Chr4g0037611 | 35.260 | 173 | 100 | 6 | 145 | 316 | 2 | 163 | 1.35e-19 | 85.1 |
Msa0573860 | MtrunA17_Chr7g0232161 | 29.851 | 268 | 155 | 13 | 4 | 263 | 52 | 294 | 1.49e-19 | 87.8 |
Msa0573860 | MtrunA17_Chr4g0068891 | 26.871 | 294 | 184 | 8 | 29 | 314 | 36 | 306 | 2.41e-19 | 87.0 |
Msa0573860 | MtrunA17_Chr1g0184241 | 25.952 | 289 | 186 | 9 | 26 | 311 | 86 | 349 | 2.80e-19 | 87.4 |
Msa0573860 | MtrunA17_Chr4g0066121 | 26.000 | 300 | 195 | 8 | 15 | 309 | 68 | 345 | 2.88e-19 | 87.4 |
Msa0573860 | MtrunA17_Chr3g0145181 | 28.070 | 285 | 176 | 12 | 31 | 309 | 73 | 334 | 3.04e-19 | 87.0 |
Msa0573860 | MtrunA17_Chr5g0421101 | 28.571 | 301 | 170 | 14 | 21 | 311 | 65 | 330 | 3.52e-19 | 87.0 |
Msa0573860 | MtrunA17_Chr1g0187811 | 24.104 | 307 | 184 | 10 | 26 | 316 | 207 | 480 | 4.39e-19 | 87.8 |
Msa0573860 | MtrunA17_Chr5g0398291 | 25.172 | 290 | 194 | 8 | 29 | 313 | 70 | 341 | 4.40e-19 | 86.7 |
Msa0573860 | MtrunA17_Chr7g0239821 | 27.835 | 291 | 174 | 11 | 29 | 310 | 83 | 346 | 5.43e-19 | 86.7 |
Msa0573860 | MtrunA17_Chr3g0145171 | 28.425 | 292 | 185 | 11 | 29 | 316 | 73 | 344 | 8.58e-19 | 85.9 |
Msa0573860 | MtrunA17_Chr4g0004071 | 25.316 | 316 | 207 | 10 | 1 | 310 | 1 | 293 | 1.19e-18 | 85.1 |
Msa0573860 | MtrunA17_Chr7g0225881 | 24.199 | 281 | 185 | 8 | 2 | 278 | 58 | 314 | 1.42e-18 | 85.5 |
Msa0573860 | MtrunA17_Chr4g0055921 | 53.226 | 62 | 29 | 0 | 12 | 73 | 9 | 70 | 3.48e-18 | 78.6 |
Msa0573860 | MtrunA17_Chr8g0354261 | 25.939 | 293 | 185 | 8 | 29 | 314 | 92 | 359 | 3.87e-18 | 84.3 |
Msa0573860 | MtrunA17_Chr7g0233661 | 37.190 | 121 | 59 | 4 | 201 | 320 | 39 | 143 | 5.49e-18 | 79.7 |
Msa0573860 | MtrunA17_Chr1g0161041 | 24.771 | 327 | 190 | 10 | 9 | 316 | 93 | 382 | 5.93e-18 | 84.0 |
Msa0573860 | MtrunA17_Chr3g0145201 | 28.070 | 285 | 176 | 12 | 31 | 309 | 708 | 969 | 6.78e-18 | 84.7 |
Msa0573860 | MtrunA17_Chr1g0161081 | 26.667 | 315 | 199 | 10 | 9 | 316 | 70 | 359 | 8.17e-18 | 83.2 |
Msa0573860 | MtrunA17_Chr8g0364471 | 22.924 | 301 | 200 | 8 | 26 | 318 | 86 | 362 | 1.06e-17 | 82.8 |
Msa0573860 | MtrunA17_Chr1g0148781 | 25.965 | 285 | 183 | 10 | 29 | 309 | 36 | 296 | 1.15e-17 | 82.4 |
Msa0573860 | MtrunA17_Chr2g0311711 | 26.214 | 309 | 176 | 10 | 23 | 314 | 83 | 356 | 1.34e-17 | 82.8 |
Msa0573860 | MtrunA17_Chr4g0004061 | 23.676 | 321 | 200 | 12 | 12 | 316 | 9 | 300 | 1.51e-17 | 82.0 |
Msa0573860 | MtrunA17_Chr2g0285931 | 25.000 | 316 | 205 | 10 | 15 | 320 | 31 | 324 | 1.69e-17 | 82.0 |
Msa0573860 | MtrunA17_Chr8g0336801 | 35.252 | 139 | 80 | 4 | 177 | 311 | 6 | 138 | 1.72e-17 | 78.6 |
Msa0573860 | MtrunA17_Chr4g0055591 | 24.437 | 311 | 200 | 10 | 15 | 316 | 64 | 348 | 1.79e-17 | 82.0 |
Msa0573860 | MtrunA17_Chr5g0407781 | 27.778 | 306 | 182 | 12 | 15 | 313 | 8 | 281 | 1.94e-17 | 81.3 |
Msa0573860 | MtrunA17_Chr4g0009561 | 25.347 | 288 | 195 | 9 | 29 | 314 | 34 | 303 | 2.33e-17 | 81.3 |
Msa0573860 | MtrunA17_Chr3g0138351 | 24.306 | 288 | 197 | 7 | 29 | 314 | 34 | 302 | 2.58e-17 | 81.3 |
Msa0573860 | MtrunA17_Chr8g0354241 | 25.597 | 293 | 186 | 8 | 29 | 314 | 92 | 359 | 3.95e-17 | 81.3 |
Msa0573860 | MtrunA17_Chr3g0114871 | 28.740 | 254 | 143 | 8 | 8 | 250 | 38 | 264 | 7.79e-17 | 79.3 |
Msa0573860 | MtrunA17_Chr8g0384481 | 24.315 | 292 | 173 | 9 | 28 | 302 | 80 | 340 | 8.29e-17 | 80.5 |
Msa0573860 | MtrunA17_Chr4g0009541 | 23.611 | 288 | 200 | 8 | 29 | 314 | 31 | 300 | 2.18e-16 | 78.6 |
Msa0573860 | MtrunA17_Chr1g0187821 | 24.359 | 312 | 202 | 10 | 15 | 316 | 70 | 357 | 2.54e-16 | 79.0 |
Msa0573860 | MtrunA17_Chr3g0087031 | 27.174 | 276 | 163 | 13 | 29 | 300 | 81 | 322 | 2.66e-16 | 79.0 |
Msa0573860 | MtrunA17_Chr4g0075471 | 39.130 | 115 | 61 | 4 | 200 | 310 | 46 | 155 | 8.54e-16 | 73.9 |
Msa0573860 | MtrunA17_Chr2g0311861 | 29.121 | 182 | 116 | 5 | 134 | 311 | 157 | 329 | 2.49e-15 | 75.9 |
Msa0573860 | MtrunA17_Chr7g0235981 | 30.693 | 202 | 118 | 7 | 125 | 318 | 124 | 311 | 2.60e-15 | 75.5 |
Msa0573860 | MtrunA17_Chr2g0293931 | 30.198 | 202 | 120 | 9 | 135 | 322 | 8 | 202 | 3.45e-15 | 73.2 |
Msa0573860 | MtrunA17_Chr1g0167911 | 26.769 | 325 | 201 | 11 | 10 | 321 | 52 | 352 | 4.58e-15 | 75.1 |
Msa0573860 | MtrunA17_Chr1g0161111 | 35.833 | 120 | 69 | 3 | 200 | 316 | 304 | 418 | 6.09e-15 | 75.1 |
Msa0573860 | MtrunA17_Chr3g0092581 | 30.114 | 176 | 111 | 6 | 146 | 318 | 3 | 169 | 1.38e-14 | 71.2 |
Msa0573860 | MtrunA17_Chr8g0335411 | 23.588 | 301 | 194 | 8 | 26 | 316 | 86 | 360 | 1.69e-14 | 73.6 |
Msa0573860 | MtrunA17_Chr6g0488511 | 27.491 | 291 | 164 | 13 | 15 | 290 | 6 | 264 | 7.68e-14 | 70.9 |
Msa0573860 | MtrunA17_Chr5g0420721 | 29.126 | 206 | 129 | 9 | 117 | 315 | 45 | 240 | 9.13e-14 | 70.1 |
Msa0573860 | MtrunA17_Chr1g0167961 | 26.712 | 292 | 163 | 13 | 26 | 301 | 88 | 344 | 1.04e-13 | 71.2 |
Msa0573860 | MtrunA17_Chr1g0167931 | 31.319 | 182 | 111 | 7 | 125 | 301 | 118 | 290 | 1.05e-13 | 70.9 |
Msa0573860 | MtrunA17_Chr7g0236011 | 26.032 | 315 | 196 | 12 | 15 | 316 | 70 | 360 | 1.95e-13 | 70.5 |
Msa0573860 | MtrunA17_Chr1g0167951 | 26.596 | 282 | 153 | 12 | 15 | 278 | 56 | 301 | 1.98e-13 | 70.1 |
Msa0573860 | MtrunA17_Chr7g0239091 | 25.080 | 311 | 195 | 11 | 6 | 310 | 154 | 432 | 2.09e-13 | 70.5 |
Msa0573860 | MtrunA17_Chr3g0126761 | 29.255 | 188 | 124 | 6 | 134 | 320 | 44 | 223 | 3.17e-13 | 68.2 |
Msa0573860 | MtrunA17_Chr4g0066991 | 24.832 | 298 | 174 | 11 | 26 | 316 | 86 | 340 | 2.65e-12 | 67.0 |
Msa0573860 | MtrunA17_Chr5g0420881 | 34.821 | 112 | 66 | 3 | 201 | 310 | 19 | 125 | 5.24e-12 | 63.2 |
Msa0573860 | MtrunA17_Chr7g0247991 | 24.013 | 304 | 189 | 8 | 26 | 316 | 86 | 360 | 8.02e-12 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0573860 | AT1G35190.1 | 66.667 | 318 | 103 | 2 | 12 | 327 | 12 | 328 | 2.86e-157 | 443 |
Msa0573860 | AT1G35190.2 | 62.893 | 318 | 92 | 3 | 12 | 327 | 12 | 305 | 5.26e-148 | 419 |
Msa0573860 | AT3G46490.1 | 60.256 | 312 | 121 | 2 | 12 | 321 | 17 | 327 | 2.91e-142 | 405 |
Msa0573860 | AT3G46500.5 | 57.278 | 316 | 127 | 4 | 12 | 326 | 17 | 325 | 2.02e-141 | 403 |
Msa0573860 | AT3G46490.2 | 60.223 | 269 | 104 | 2 | 12 | 278 | 17 | 284 | 1.35e-119 | 347 |
Msa0573860 | AT3G46480.1 | 54.633 | 313 | 96 | 3 | 12 | 324 | 17 | 283 | 2.53e-118 | 343 |
Msa0573860 | AT3G46500.7 | 56.296 | 270 | 110 | 4 | 12 | 280 | 17 | 279 | 1.31e-114 | 334 |
Msa0573860 | AT3G46500.10 | 56.809 | 257 | 105 | 3 | 70 | 326 | 1 | 251 | 3.68e-113 | 328 |
Msa0573860 | AT3G46500.1 | 56.809 | 257 | 105 | 3 | 70 | 326 | 1 | 251 | 3.68e-113 | 328 |
Msa0573860 | AT3G46500.9 | 52.326 | 258 | 91 | 4 | 70 | 326 | 1 | 227 | 1.27e-97 | 288 |
Msa0573860 | AT3G46500.4 | 59.474 | 190 | 76 | 1 | 137 | 326 | 1 | 189 | 1.74e-87 | 261 |
Msa0573860 | AT3G46500.3 | 55.450 | 211 | 88 | 3 | 70 | 280 | 1 | 205 | 1.59e-86 | 259 |
Msa0573860 | AT4G16765.6 | 49.600 | 250 | 121 | 2 | 70 | 319 | 1 | 245 | 2.02e-85 | 258 |
Msa0573860 | AT4G16765.1 | 49.600 | 250 | 121 | 2 | 70 | 319 | 1 | 245 | 2.02e-85 | 258 |
Msa0573860 | AT4G16765.2 | 49.600 | 250 | 121 | 2 | 70 | 319 | 1 | 245 | 2.02e-85 | 258 |
Msa0573860 | AT4G16765.3 | 50.000 | 232 | 111 | 2 | 70 | 301 | 1 | 227 | 6.07e-78 | 238 |
Msa0573860 | AT3G46500.2 | 54.497 | 189 | 80 | 3 | 70 | 258 | 1 | 183 | 3.24e-74 | 227 |
Msa0573860 | AT4G16770.1 | 41.880 | 234 | 131 | 2 | 8 | 241 | 18 | 246 | 1.03e-62 | 200 |
Msa0573860 | AT3G46500.6 | 58.621 | 145 | 59 | 1 | 136 | 280 | 31 | 174 | 1.29e-61 | 195 |
Msa0573860 | AT3G46500.8 | 58.621 | 145 | 59 | 1 | 136 | 280 | 31 | 174 | 1.29e-61 | 195 |
Msa0573860 | AT4G16765.4 | 49.206 | 189 | 91 | 2 | 70 | 258 | 1 | 184 | 4.29e-58 | 186 |
Msa0573860 | AT4G16765.5 | 56.452 | 124 | 54 | 0 | 196 | 319 | 76 | 199 | 1.57e-50 | 167 |
Msa0573860 | AT3G49630.3 | 31.818 | 330 | 189 | 13 | 11 | 322 | 14 | 325 | 3.07e-40 | 144 |
Msa0573860 | AT3G49630.1 | 33.013 | 312 | 176 | 12 | 26 | 322 | 36 | 329 | 4.06e-40 | 144 |
Msa0573860 | AT3G50210.4 | 32.000 | 300 | 177 | 9 | 8 | 293 | 14 | 300 | 4.19e-40 | 144 |
Msa0573860 | AT3G50210.1 | 32.000 | 300 | 177 | 9 | 8 | 293 | 14 | 300 | 4.19e-40 | 144 |
Msa0573860 | AT3G50210.3 | 32.000 | 300 | 177 | 9 | 8 | 293 | 14 | 300 | 4.19e-40 | 144 |
Msa0573860 | AT3G19010.1 | 32.476 | 311 | 180 | 11 | 5 | 301 | 21 | 315 | 5.03e-37 | 136 |
Msa0573860 | AT3G19010.4 | 32.476 | 311 | 180 | 11 | 5 | 301 | 21 | 315 | 5.03e-37 | 136 |
Msa0573860 | AT3G49620.1 | 30.968 | 310 | 185 | 9 | 26 | 322 | 61 | 354 | 1.27e-35 | 132 |
Msa0573860 | AT5G24530.1 | 31.126 | 302 | 179 | 12 | 15 | 309 | 41 | 320 | 1.67e-33 | 126 |
Msa0573860 | AT5G05600.1 | 30.612 | 294 | 162 | 9 | 29 | 309 | 85 | 349 | 1.09e-32 | 125 |
Msa0573860 | AT3G11180.1 | 31.597 | 288 | 167 | 12 | 29 | 309 | 114 | 378 | 2.56e-30 | 119 |
Msa0573860 | AT3G11180.2 | 31.597 | 288 | 167 | 12 | 29 | 309 | 114 | 378 | 3.40e-30 | 119 |
Msa0573860 | AT5G08640.2 | 30.000 | 310 | 178 | 10 | 12 | 309 | 43 | 325 | 1.22e-29 | 116 |
Msa0573860 | AT5G08640.1 | 30.000 | 310 | 178 | 10 | 12 | 309 | 43 | 325 | 1.22e-29 | 116 |
Msa0573860 | AT2G38240.1 | 28.669 | 293 | 184 | 9 | 24 | 311 | 61 | 333 | 8.84e-29 | 114 |
Msa0573860 | AT5G63600.1 | 27.922 | 308 | 189 | 8 | 14 | 315 | 35 | 315 | 1.17e-28 | 113 |
Msa0573860 | AT3G19010.3 | 30.547 | 311 | 156 | 11 | 5 | 301 | 21 | 285 | 1.39e-28 | 112 |
Msa0573860 | AT3G13610.1 | 25.982 | 331 | 201 | 11 | 1 | 318 | 51 | 350 | 3.64e-28 | 112 |
Msa0573860 | AT1G12010.1 | 30.592 | 304 | 176 | 12 | 14 | 310 | 9 | 284 | 4.05e-28 | 111 |
Msa0573860 | AT5G63600.2 | 27.832 | 309 | 189 | 9 | 14 | 315 | 35 | 316 | 1.48e-27 | 110 |
Msa0573860 | AT1G78550.1 | 27.879 | 330 | 206 | 13 | 1 | 322 | 49 | 354 | 1.62e-27 | 110 |
Msa0573860 | AT1G17010.1 | 31.208 | 298 | 180 | 8 | 18 | 311 | 64 | 340 | 5.98e-27 | 109 |
Msa0573860 | AT3G19000.1 | 28.354 | 328 | 206 | 10 | 14 | 327 | 34 | 346 | 8.25e-27 | 108 |
Msa0573860 | AT3G21420.1 | 29.967 | 307 | 186 | 13 | 11 | 309 | 57 | 342 | 1.82e-26 | 107 |
Msa0573860 | AT4G25300.1 | 29.137 | 278 | 169 | 9 | 4 | 277 | 51 | 304 | 2.13e-26 | 107 |
Msa0573860 | AT1G17020.1 | 31.679 | 262 | 159 | 9 | 18 | 277 | 63 | 306 | 2.47e-26 | 107 |
Msa0573860 | AT3G50210.2 | 35.912 | 181 | 107 | 5 | 116 | 293 | 44 | 218 | 1.17e-25 | 103 |
Msa0573860 | AT5G43935.1 | 27.389 | 314 | 166 | 10 | 14 | 313 | 21 | 286 | 1.42e-25 | 104 |
Msa0573860 | AT3G49630.2 | 34.579 | 214 | 122 | 9 | 116 | 322 | 54 | 256 | 2.30e-25 | 102 |
Msa0573860 | AT1G62380.1 | 28.662 | 314 | 169 | 13 | 14 | 310 | 9 | 284 | 2.80e-25 | 103 |
Msa0573860 | AT2G36690.2 | 25.753 | 299 | 188 | 6 | 11 | 301 | 63 | 335 | 5.10e-25 | 103 |
Msa0573860 | AT2G36690.1 | 25.753 | 299 | 188 | 6 | 11 | 301 | 63 | 335 | 5.10e-25 | 103 |
Msa0573860 | AT3G55970.1 | 30.031 | 323 | 185 | 14 | 3 | 309 | 44 | 341 | 6.04e-25 | 103 |
Msa0573860 | AT4G23340.1 | 29.286 | 280 | 156 | 10 | 12 | 278 | 10 | 260 | 7.40e-25 | 102 |
Msa0573860 | AT4G10490.1 | 28.615 | 325 | 194 | 13 | 2 | 320 | 39 | 331 | 7.43e-25 | 103 |
Msa0573860 | AT4G21200.1 | 28.897 | 263 | 155 | 10 | 29 | 288 | 65 | 298 | 1.02e-24 | 102 |
Msa0573860 | AT3G51240.1 | 28.070 | 285 | 176 | 10 | 31 | 307 | 62 | 325 | 5.19e-24 | 101 |
Msa0573860 | AT5G58660.1 | 27.609 | 297 | 195 | 7 | 6 | 287 | 21 | 312 | 6.28e-24 | 100 |
Msa0573860 | AT3G47190.1 | 27.597 | 308 | 186 | 8 | 15 | 312 | 30 | 310 | 6.66e-24 | 100 |
Msa0573860 | AT5G20400.1 | 29.653 | 317 | 182 | 13 | 12 | 313 | 50 | 340 | 9.42e-24 | 100 |
Msa0573860 | AT1G80340.1 | 27.532 | 316 | 192 | 13 | 12 | 318 | 50 | 337 | 1.49e-23 | 99.8 |
Msa0573860 | AT1G15550.1 | 27.500 | 320 | 199 | 13 | 6 | 318 | 51 | 344 | 1.50e-23 | 99.8 |
Msa0573860 | AT4G21690.1 | 26.543 | 324 | 212 | 13 | 8 | 324 | 43 | 347 | 1.65e-23 | 99.8 |
Msa0573860 | AT4G25420.1 | 26.603 | 312 | 204 | 9 | 17 | 321 | 70 | 363 | 3.51e-23 | 99.0 |
Msa0573860 | AT1G78550.2 | 27.458 | 295 | 185 | 12 | 36 | 322 | 3 | 276 | 5.95e-23 | 96.7 |
Msa0573860 | AT4G10500.1 | 28.720 | 289 | 175 | 10 | 2 | 286 | 41 | 302 | 7.12e-23 | 97.8 |
Msa0573860 | AT2G34555.1 | 30.657 | 274 | 167 | 10 | 10 | 280 | 25 | 278 | 9.95e-23 | 97.1 |
Msa0573860 | AT1G78440.1 | 26.462 | 325 | 209 | 9 | 5 | 320 | 10 | 313 | 1.18e-22 | 97.1 |
Msa0573860 | AT1G05010.1 | 27.885 | 312 | 184 | 12 | 11 | 310 | 6 | 288 | 3.72e-22 | 95.5 |
Msa0573860 | AT5G63590.1 | 28.013 | 307 | 185 | 9 | 14 | 309 | 16 | 297 | 6.60e-22 | 94.4 |
Msa0573860 | AT1G55290.1 | 24.290 | 317 | 198 | 11 | 14 | 318 | 64 | 350 | 8.71e-22 | 94.7 |
Msa0573860 | AT1G06640.1 | 25.606 | 289 | 185 | 8 | 29 | 311 | 87 | 351 | 1.04e-21 | 94.7 |
Msa0573860 | AT4G16330.2 | 25.392 | 319 | 202 | 10 | 6 | 316 | 61 | 351 | 1.58e-21 | 94.4 |
Msa0573860 | AT1G52820.1 | 26.852 | 324 | 207 | 10 | 1 | 316 | 1 | 302 | 1.88e-21 | 93.2 |
Msa0573860 | AT4G22880.1 | 28.483 | 323 | 190 | 13 | 6 | 313 | 45 | 341 | 2.43e-21 | 93.6 |
Msa0573860 | AT4G22880.2 | 28.483 | 323 | 190 | 13 | 6 | 313 | 45 | 341 | 2.43e-21 | 93.6 |
Msa0573860 | AT4G22880.3 | 28.483 | 323 | 190 | 13 | 6 | 313 | 45 | 341 | 2.43e-21 | 93.6 |
Msa0573860 | AT1G80330.1 | 25.723 | 311 | 200 | 13 | 14 | 315 | 51 | 339 | 3.10e-21 | 93.2 |
Msa0573860 | AT5G59530.1 | 26.398 | 322 | 201 | 11 | 4 | 316 | 57 | 351 | 6.78e-21 | 92.4 |
Msa0573860 | AT3G19010.2 | 29.070 | 258 | 156 | 9 | 5 | 250 | 21 | 263 | 8.87e-21 | 91.3 |
Msa0573860 | AT2G30840.1 | 26.686 | 341 | 193 | 13 | 5 | 325 | 50 | 353 | 9.73e-21 | 92.0 |
Msa0573860 | AT5G43440.1 | 26.923 | 312 | 194 | 10 | 15 | 314 | 65 | 354 | 1.24e-20 | 91.7 |
Msa0573860 | AT1G49390.1 | 29.496 | 278 | 168 | 13 | 14 | 283 | 47 | 304 | 1.38e-20 | 91.3 |
Msa0573860 | AT1G77330.1 | 25.806 | 310 | 192 | 12 | 11 | 310 | 5 | 286 | 1.57e-20 | 90.5 |
Msa0573860 | AT5G51810.1 | 25.667 | 300 | 199 | 9 | 28 | 321 | 80 | 361 | 1.61e-20 | 91.7 |
Msa0573860 | AT1G47990.1 | 27.619 | 315 | 184 | 12 | 15 | 316 | 18 | 301 | 1.62e-20 | 90.9 |
Msa0573860 | AT5G59540.1 | 27.241 | 290 | 182 | 10 | 26 | 309 | 80 | 346 | 1.72e-20 | 91.3 |
Msa0573860 | AT1G49390.2 | 30.612 | 245 | 147 | 11 | 42 | 283 | 1 | 225 | 4.38e-20 | 88.6 |
Msa0573860 | AT5G07200.1 | 24.834 | 302 | 206 | 9 | 26 | 321 | 78 | 364 | 5.05e-20 | 90.1 |
Msa0573860 | AT1G30040.1 | 25.868 | 317 | 211 | 10 | 8 | 320 | 27 | 323 | 1.40e-19 | 88.6 |
Msa0573860 | AT5G43450.1 | 25.155 | 322 | 189 | 10 | 15 | 316 | 64 | 353 | 3.99e-19 | 87.4 |
Msa0573860 | AT5G54000.2 | 27.586 | 319 | 203 | 12 | 12 | 322 | 51 | 349 | 4.37e-19 | 87.0 |
Msa0573860 | AT1G06650.2 | 26.871 | 294 | 175 | 8 | 29 | 311 | 87 | 351 | 4.41e-19 | 87.4 |
Msa0573860 | AT1G03410.2 | 24.768 | 323 | 204 | 9 | 6 | 323 | 51 | 339 | 4.89e-19 | 87.0 |
Msa0573860 | AT3G12900.1 | 24.012 | 329 | 215 | 12 | 1 | 318 | 41 | 345 | 6.49e-19 | 86.7 |
Msa0573860 | AT1G03410.1 | 24.768 | 323 | 204 | 9 | 6 | 323 | 88 | 376 | 8.48e-19 | 86.7 |
Msa0573860 | AT4G25310.1 | 29.008 | 262 | 156 | 13 | 25 | 281 | 69 | 305 | 1.38e-18 | 85.9 |
Msa0573860 | AT1G04380.1 | 25.418 | 299 | 191 | 8 | 26 | 320 | 61 | 331 | 1.83e-18 | 85.1 |
Msa0573860 | AT5G12270.1 | 24.841 | 314 | 202 | 9 | 15 | 318 | 59 | 348 | 2.41e-18 | 85.1 |
Msa0573860 | AT5G51310.1 | 26.259 | 278 | 174 | 9 | 12 | 277 | 5 | 263 | 2.86e-18 | 84.3 |
Msa0573860 | AT5G54000.1 | 28.720 | 289 | 178 | 12 | 42 | 322 | 1 | 269 | 3.00e-18 | 83.6 |
Msa0573860 | AT2G44800.1 | 26.562 | 320 | 200 | 14 | 1 | 310 | 41 | 335 | 3.07e-18 | 84.7 |
Msa0573860 | AT3G51240.2 | 28.682 | 258 | 155 | 10 | 58 | 307 | 5 | 241 | 6.07e-18 | 82.8 |
Msa0573860 | AT1G04350.1 | 24.579 | 297 | 195 | 8 | 26 | 316 | 74 | 347 | 7.93e-18 | 83.6 |
Msa0573860 | AT1G06620.1 | 27.875 | 287 | 169 | 10 | 37 | 316 | 92 | 347 | 8.74e-18 | 83.6 |
Msa0573860 | AT3G19000.2 | 27.391 | 230 | 144 | 8 | 29 | 250 | 54 | 268 | 1.28e-17 | 82.0 |
Msa0573860 | AT3G60290.1 | 29.412 | 255 | 151 | 11 | 26 | 275 | 70 | 300 | 2.16e-17 | 82.4 |
Msa0573860 | AT1G60980.1 | 23.411 | 299 | 198 | 8 | 28 | 315 | 79 | 357 | 2.20e-17 | 82.4 |
Msa0573860 | AT5G05600.2 | 27.778 | 234 | 128 | 8 | 29 | 250 | 85 | 289 | 2.51e-17 | 81.3 |
Msa0573860 | AT2G19590.1 | 28.571 | 294 | 169 | 13 | 4 | 290 | 10 | 269 | 3.24e-16 | 78.6 |
Msa0573860 | AT2G30830.1 | 33.696 | 184 | 101 | 7 | 126 | 301 | 160 | 330 | 3.83e-16 | 78.6 |
Msa0573860 | AT3G61400.1 | 25.850 | 294 | 177 | 11 | 37 | 320 | 95 | 357 | 1.44e-15 | 77.0 |
Msa0573860 | AT1G06645.1 | 24.516 | 310 | 165 | 10 | 26 | 311 | 97 | 361 | 2.07e-15 | 76.6 |
Msa0573860 | AT4G16330.1 | 27.193 | 228 | 144 | 8 | 100 | 316 | 29 | 245 | 2.32e-15 | 75.1 |
Msa0573860 | AT1G03400.1 | 25.246 | 305 | 189 | 11 | 6 | 301 | 50 | 324 | 3.19e-15 | 75.9 |
Msa0573860 | AT5G63595.1 | 24.333 | 300 | 171 | 10 | 4 | 294 | 18 | 270 | 3.38e-15 | 75.1 |
Msa0573860 | AT5G58660.2 | 26.357 | 258 | 172 | 6 | 6 | 250 | 21 | 273 | 3.48e-15 | 75.1 |
Msa0573860 | AT3G55970.2 | 29.278 | 263 | 146 | 13 | 3 | 250 | 44 | 281 | 3.66e-15 | 75.1 |
Msa0573860 | AT1G02400.1 | 24.759 | 311 | 197 | 9 | 20 | 314 | 25 | 314 | 1.67e-14 | 73.6 |
Msa0573860 | AT2G25450.1 | 26.953 | 256 | 160 | 7 | 26 | 278 | 74 | 305 | 2.12e-14 | 73.6 |
Msa0573860 | AT4G25300.2 | 33.784 | 148 | 86 | 4 | 133 | 277 | 72 | 210 | 3.32e-14 | 72.0 |
Msa0573860 | AT1G06640.3 | 23.982 | 221 | 143 | 6 | 29 | 248 | 87 | 283 | 5.24e-14 | 71.6 |
Msa0573860 | AT1G52820.2 | 26.172 | 256 | 160 | 9 | 1 | 249 | 1 | 234 | 9.96e-14 | 70.5 |
Msa0573860 | AT4G03070.1 | 24.606 | 317 | 204 | 10 | 6 | 310 | 8 | 301 | 7.66e-13 | 68.6 |
Msa0573860 | AT4G23340.2 | 32.215 | 149 | 87 | 6 | 137 | 278 | 1 | 142 | 7.66e-13 | 67.0 |
Msa0573860 | AT1G80320.1 | 22.150 | 307 | 204 | 11 | 29 | 324 | 33 | 315 | 1.52e-12 | 67.8 |
Msa0573860 | AT1G52800.1 | 23.954 | 263 | 172 | 11 | 20 | 277 | 23 | 262 | 3.09e-12 | 67.0 |
Msa0573860 | AT2G19590.2 | 28.958 | 259 | 147 | 12 | 39 | 290 | 26 | 254 | 4.92e-12 | 65.9 |
Msa0573860 | AT1G04380.2 | 24.000 | 225 | 148 | 5 | 26 | 250 | 61 | 262 | 1.23e-11 | 64.7 |
Find 98 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGGGCTCTCCTAGGATTTC+TGG | 0.108060 | 4_1:-77152655 | None:intergenic |
AGGAATCTCCTTTCCCATTT+TGG | 0.161664 | 4_1:-77151683 | None:intergenic |
TGGAATAAACCAAGACTTTA+TGG | 0.167891 | 4_1:+77151948 | Msa0573860:CDS |
CTAAAGTCTTGCACCGATTC+TGG | 0.216518 | 4_1:+77151904 | Msa0573860:intron |
GAACTGATGTAGTACAATTA+AGG | 0.236373 | 4_1:-77154322 | None:intergenic |
TTTACAGATTGCGTATTTCT+TGG | 0.241759 | 4_1:+77153716 | Msa0573860:intron |
CTTTGTAATCTCCATGTAAT+TGG | 0.247548 | 4_1:-77152095 | None:intergenic |
ACAAGACAGGTACTCCAAAA+TGG | 0.285823 | 4_1:+77151669 | Msa0573860:exon |
AGTGTAAATACCAGGTTAAT+TGG | 0.308070 | 4_1:+77154236 | Msa0573860:three_prime_UTR |
CATTGGTTACGGCCATAAAA+AGG | 0.319049 | 4_1:-77152165 | None:intergenic |
TACAAAGAAGGCTACTATAT+TGG | 0.329969 | 4_1:+77152111 | Msa0573860:CDS |
TTTGTAGATATGCAAGAATA+AGG | 0.335603 | 4_1:+77152983 | Msa0573860:intron |
AGGATGCTAAACCTCAGATA+TGG | 0.346815 | 4_1:+77153003 | Msa0573860:CDS |
CATGCTGATCTGCTTGTATA+CGG | 0.356996 | 4_1:+77154138 | Msa0573860:CDS |
GATTTCCTCCTGTATATTAC+CGG | 0.364363 | 4_1:+77154085 | Msa0573860:intron |
TTAACGTTATGGTCGATGTT+AGG | 0.366365 | 4_1:-77151745 | None:intergenic |
GCCTGGATGGAGGGAGACTA+TGG | 0.367255 | 4_1:+77152297 | Msa0573860:CDS |
AATAGCCCTTGCACTTGGTT+TGG | 0.367740 | 4_1:+77152612 | Msa0573860:CDS |
TAACGTTAATTTACTCAAAC+AGG | 0.370793 | 4_1:+77151759 | Msa0573860:CDS |
AGAGCATTTATAGTCAATCT+TGG | 0.373067 | 4_1:+77153235 | Msa0573860:intron |
GTTTGAGTAAATTAACGTTA+TGG | 0.382316 | 4_1:-77151756 | None:intergenic |
ACTATATCAGTTCTTTATGT+TGG | 0.385150 | 4_1:+77154260 | Msa0573860:three_prime_UTR |
AGATGATGTCCAGGGTCTTC+AGG | 0.398861 | 4_1:+77152879 | Msa0573860:CDS |
GAATAGGAGTATAACCCTTA+TGG | 0.403642 | 4_1:-77152047 | None:intergenic |
TCTACATTGCACAGAGTCAT+AGG | 0.404575 | 4_1:+77153473 | Msa0573860:CDS |
AACTGATGTAGTACAATTAA+GGG | 0.410389 | 4_1:-77154321 | None:intergenic |
TTGAGAATTGCTTGTGTTTG+AGG | 0.411945 | 4_1:-77151703 | None:intergenic |
TATACGGCAAACAATAATCT+TGG | 0.415227 | 4_1:+77154154 | Msa0573860:exon |
GCTGGAGCTCATACTGACTA+TGG | 0.421580 | 4_1:+77152835 | Msa0573860:CDS |
ATAGTGTAGCAAGCGCAAAA+TGG | 0.428571 | 4_1:-77152680 | None:intergenic |
CGTAACCAATGGCCTGCATC+AGG | 0.452468 | 4_1:+77152177 | Msa0573860:CDS |
GGTTTATTCCATGATTGATA+AGG | 0.454840 | 4_1:-77151936 | None:intergenic |
TTGGAGCTGTGCGGCTTGGA+AGG | 0.455400 | 4_1:+77154173 | Msa0573860:three_prime_UTR |
TTTGATAAACCAGAAATCCT+AGG | 0.456463 | 4_1:+77152646 | Msa0573860:CDS |
CTGATGCAGGCCATTGGTTA+CGG | 0.457219 | 4_1:-77152176 | None:intergenic |
CAAGACAGGTACTCCAAAAT+GGG | 0.462957 | 4_1:+77151670 | Msa0573860:exon |
TTGCGCTTGCTACACTATCA+AGG | 0.466142 | 4_1:+77152685 | Msa0573860:CDS |
AAGTAGTCCCGGTAATATAC+AGG | 0.473367 | 4_1:-77154093 | None:intergenic |
TCTCCGCAACGATAGCCATA+AGG | 0.477341 | 4_1:+77152032 | Msa0573860:CDS |
CTCCGCAACGATAGCCATAA+GGG | 0.479201 | 4_1:+77152033 | Msa0573860:CDS |
TTGCACAGAGTCATAGGAAA+TGG | 0.481521 | 4_1:+77153479 | Msa0573860:CDS |
TCCATAGTCTCCCTCCATCC+AGG | 0.482521 | 4_1:-77152298 | None:intergenic |
ATTGCGTATTTCTTGGAGCC+TGG | 0.482843 | 4_1:+77153723 | Msa0573860:CDS |
TCAAGGATTTCATCAAGAAT+AGG | 0.485873 | 4_1:-77152063 | None:intergenic |
GTTGGCAACAGATGATGTCC+AGG | 0.495344 | 4_1:+77152870 | Msa0573860:CDS |
AATCTTGGAGCTGTGCGGCT+TGG | 0.500340 | 4_1:+77154169 | Msa0573860:exon |
AGCAAGCGCAAAATGGCAAT+GGG | 0.503078 | 4_1:-77152673 | None:intergenic |
AGGATAATAGCCCTTGCACT+TGG | 0.512064 | 4_1:+77152607 | Msa0573860:CDS |
CTATGGTCTGATTACTCTGT+TGG | 0.512872 | 4_1:+77152852 | Msa0573860:CDS |
TTACATGGAGATTACAAAGA+AGG | 0.520092 | 4_1:+77152099 | Msa0573860:CDS |
GGATGCTAAACCTCAGATAT+GGG | 0.520380 | 4_1:+77153004 | Msa0573860:CDS |
TCACAAGGGTTATATGCAGC+TGG | 0.521338 | 4_1:+77152817 | Msa0573860:CDS |
GTTATGGTCGATGTTAGGAT+TGG | 0.522588 | 4_1:-77151740 | None:intergenic |
AAACGTCGTCCATAAAGTCT+TGG | 0.526155 | 4_1:-77151957 | None:intergenic |
AAATGGCAATGGGCTCTCCT+AGG | 0.526995 | 4_1:-77152663 | None:intergenic |
TAGCAAGCGCAAAATGGCAA+TGG | 0.527707 | 4_1:-77152674 | None:intergenic |
TATGTGATGTGAGTGTGGAC+AGG | 0.527933 | 4_1:-77151624 | None:intergenic |
AGTCAATCTTGGAGACATGT+TGG | 0.531301 | 4_1:+77153246 | Msa0573860:CDS |
GGAGGACGTGACACCATTGA+AGG | 0.531399 | 4_1:+77153025 | Msa0573860:CDS |
CTACTTGAGTCAGCGCTACA+AGG | 0.532922 | 4_1:+77154110 | Msa0573860:CDS |
AGATGTTCTGCCTGGATGGA+GGG | 0.539823 | 4_1:+77152288 | Msa0573860:intron |
GTAAGGACTAACCCCTTCAA+TGG | 0.542719 | 4_1:-77153038 | None:intergenic |
TGAGCAAAACTTACAATGCT+CGG | 0.556162 | 4_1:-77152333 | None:intergenic |
CAGAGAAGAGAAGACAAGAC+AGG | 0.556536 | 4_1:+77151656 | Msa0573860:five_prime_UTR |
AAACTTACAATGCTCGGCGT+TGG | 0.559011 | 4_1:-77152327 | None:intergenic |
AATTATTAAGTACCTGATGC+AGG | 0.560269 | 4_1:-77152189 | None:intergenic |
GATCCTCAAAACCAATTACA+TGG | 0.563110 | 4_1:+77152084 | Msa0573860:CDS |
TAGATGTTCTGCCTGGATGG+AGG | 0.569182 | 4_1:+77152287 | Msa0573860:intron |
AAGTACCTGATGCAGGCCAT+TGG | 0.571626 | 4_1:-77152182 | None:intergenic |
GCCTGGTCATGATTGTCTAG+TGG | 0.571866 | 4_1:+77153740 | Msa0573860:CDS |
TAGCATCCAAACCAAGTGCA+AGG | 0.577541 | 4_1:-77152618 | None:intergenic |
AGCGCTGACTCAAGTAGTCC+CGG | 0.585537 | 4_1:-77154104 | None:intergenic |
TTGGAGACATGTTGGAACGC+TGG | 0.597496 | 4_1:+77153254 | Msa0573860:CDS |
ATTTCCTCCTGTATATTACC+GGG | 0.601874 | 4_1:+77154086 | Msa0573860:CDS |
CAGGTACTCCAAAATGGGAA+AGG | 0.601972 | 4_1:+77151675 | Msa0573860:exon |
TGTTGTATGTGATGTGAGTG+TGG | 0.602461 | 4_1:-77151629 | None:intergenic |
AAGTGGGAAAAGCACTTGCA+AGG | 0.606285 | 4_1:+77152587 | Msa0573860:CDS |
TATGATATACACAGAGAAGT+GGG | 0.607491 | 4_1:+77152571 | Msa0573860:intron |
TCCACTAGACAATCATGACC+AGG | 0.608617 | 4_1:-77153741 | None:intergenic |
GAGGACGTGACACCATTGAA+GGG | 0.611133 | 4_1:+77153026 | Msa0573860:CDS |
AACCCTTATGGCTATCGTTG+CGG | 0.611634 | 4_1:-77152035 | None:intergenic |
AGCATCCAAACCAAGTGCAA+GGG | 0.611638 | 4_1:-77152617 | None:intergenic |
GTAGTGTTCACTTACTTGGG+AGG | 0.611824 | 4_1:-77153795 | None:intergenic |
TGATATAGTACCAATTAACC+TGG | 0.619036 | 4_1:-77154246 | None:intergenic |
ATATAATTAGTGTAAATACC+AGG | 0.621705 | 4_1:+77154228 | Msa0573860:three_prime_UTR |
GTCACGTCCTCCCATATCTG+AGG | 0.624050 | 4_1:-77153014 | None:intergenic |
TTATGATATACACAGAGAAG+TGG | 0.627598 | 4_1:+77152570 | Msa0573860:intron |
AAAGTCTCAGATCCCTCACA+AGG | 0.639992 | 4_1:+77152802 | Msa0573860:CDS |
GCTGCATATAACCCTTGTGA+GGG | 0.642341 | 4_1:-77152814 | None:intergenic |
GCATTCTTACCTGAAGACCC+TGG | 0.655723 | 4_1:-77152888 | None:intergenic |
AGGACGTGACACCATTGAAG+GGG | 0.666925 | 4_1:+77153027 | Msa0573860:CDS |
ACAATAATCTTGGAGCTGTG+CGG | 0.667622 | 4_1:+77154164 | Msa0573860:exon |
TTGGCAACAGATGATGTCCA+GGG | 0.668649 | 4_1:+77152871 | Msa0573860:CDS |
GGTCGATGTTAGGATTGGAG+AGG | 0.672045 | 4_1:-77151735 | None:intergenic |
TAGTCCCGGTAATATACAGG+AGG | 0.673234 | 4_1:-77154090 | None:intergenic |
AGCTGCATATAACCCTTGTG+AGG | 0.677548 | 4_1:-77152815 | None:intergenic |
TGCTAAACCTCAGATATGGG+AGG | 0.685046 | 4_1:+77153007 | Msa0573860:CDS |
AAGTCTCAGATCCCTCACAA+GGG | 0.733403 | 4_1:+77152803 | Msa0573860:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTAATTATTGAAATGTTA+GGG | - | chr4_1:77152939-77152958 | None:intergenic | 10.0% |
!! | TAATTAATTATTGAAATGTT+AGG | - | chr4_1:77152940-77152959 | None:intergenic | 10.0% |
!! | TTACTTTCTATATAAACAAA+GGG | - | chr4_1:77152413-77152432 | None:intergenic | 15.0% |
!! | ATTACTTTCTATATAAACAA+AGG | - | chr4_1:77152414-77152433 | None:intergenic | 15.0% |
!! | ATAAACAATGAAATAGTTTA+GGG | - | chr4_1:77153209-77153228 | None:intergenic | 15.0% |
!! | TATAAACAATGAAATAGTTT+AGG | - | chr4_1:77153210-77153229 | None:intergenic | 15.0% |
!! | CATTGTTAAATATTTACTTT+AGG | + | chr4_1:77153573-77153592 | Msa0573860:intron | 15.0% |
!! | TGACAAAATTAATAAAACTT+AGG | - | chr4_1:77153915-77153934 | None:intergenic | 15.0% |
!!! | AAGTTTTATTAATTTTGTCA+CGG | + | chr4_1:77153915-77153934 | Msa0573860:intron | 15.0% |
!!! | TCAAACATACAATTTTTATA+AGG | + | chr4_1:77153943-77153962 | Msa0573860:intron | 15.0% |
!! | CATTTGGATTGAAATTATTT+AGG | + | chr4_1:77152461-77152480 | Msa0573860:intron | 20.0% |
!!! | TTGCTTTTCTGATTTAAAAA+GGG | + | chr4_1:77153068-77153087 | Msa0573860:intron | 20.0% |
!! | TCTGTAAATAGAAACAATAT+AGG | - | chr4_1:77153704-77153723 | None:intergenic | 20.0% |
!! | ATATAATTAGTGTAAATACC+AGG | + | chr4_1:77154228-77154247 | Msa0573860:three_prime_UTR | 20.0% |
! | GTTTGAGTAAATTAACGTTA+TGG | - | chr4_1:77151759-77151778 | None:intergenic | 25.0% |
! | TAACGTTAATTTACTCAAAC+AGG | + | chr4_1:77151759-77151778 | Msa0573860:CDS | 25.0% |
! | AGTAGTAATAACAAACAGAA+AGG | - | chr4_1:77151819-77151838 | None:intergenic | 25.0% |
!! | TTTTTCTACCTTATCAATCA+TGG | + | chr4_1:77151928-77151947 | Msa0573860:CDS | 25.0% |
! | TAGATCATGTTAAACTACAT+CGG | + | chr4_1:77152433-77152452 | Msa0573860:intron | 25.0% |
! | CTAGTATTAGCATTGTAAAA+GGG | + | chr4_1:77152491-77152510 | Msa0573860:intron | 25.0% |
! | TAGTATTAGCATTGTAAAAG+GGG | + | chr4_1:77152492-77152511 | Msa0573860:intron | 25.0% |
!! | ATTGAATTAGTAGTCTCTTT+TGG | + | chr4_1:77152709-77152728 | Msa0573860:intron | 25.0% |
! | TTTGTAGATATGCAAGAATA+AGG | + | chr4_1:77152983-77153002 | Msa0573860:intron | 25.0% |
!!! | GTTGCTTTTCTGATTTAAAA+AGG | + | chr4_1:77153067-77153086 | Msa0573860:intron | 25.0% |
!! | AACCTTTTTATGTTTCATTG+TGG | + | chr4_1:77153181-77153200 | Msa0573860:intron | 25.0% |
! | ATCCACAATGAAACATAAAA+AGG | - | chr4_1:77153186-77153205 | None:intergenic | 25.0% |
! | GAACACAATCTGAATTAAAA+AGG | - | chr4_1:77153414-77153433 | None:intergenic | 25.0% |
! | TTTACTTCACATTTAAACTC+AGG | + | chr4_1:77153450-77153469 | Msa0573860:intron | 25.0% |
!! | TTTTATTAATTTTGTCACGG+AGG | + | chr4_1:77153918-77153937 | Msa0573860:intron | 25.0% |
! | GTAAGACTTATAAAGAATAC+TGG | - | chr4_1:77154042-77154061 | None:intergenic | 25.0% |
! | ACTATATCAGTTCTTTATGT+TGG | + | chr4_1:77154260-77154279 | Msa0573860:three_prime_UTR | 25.0% |
! | AACTGATGTAGTACAATTAA+GGG | - | chr4_1:77154324-77154343 | None:intergenic | 25.0% |
AAGGTAGAAAAAACCAGAAT+CGG | - | chr4_1:77151920-77151939 | None:intergenic | 30.0% | |
GGTTTATTCCATGATTGATA+AGG | - | chr4_1:77151939-77151958 | None:intergenic | 30.0% | |
TGGAATAAACCAAGACTTTA+TGG | + | chr4_1:77151948-77151967 | Msa0573860:CDS | 30.0% | |
! | AGTTTCATCTTTTCATTGAG+AGG | - | chr4_1:77152012-77152031 | None:intergenic | 30.0% |
TCAAGGATTTCATCAAGAAT+AGG | - | chr4_1:77152066-77152085 | None:intergenic | 30.0% | |
CTTTGTAATCTCCATGTAAT+TGG | - | chr4_1:77152098-77152117 | None:intergenic | 30.0% | |
TTACATGGAGATTACAAAGA+AGG | + | chr4_1:77152099-77152118 | Msa0573860:CDS | 30.0% | |
TACAAAGAAGGCTACTATAT+TGG | + | chr4_1:77152111-77152130 | Msa0573860:CDS | 30.0% | |
! | CTTCATCATAAGCCTTTTTA+TGG | + | chr4_1:77152153-77152172 | Msa0573860:CDS | 30.0% |
AATTATTAAGTACCTGATGC+AGG | - | chr4_1:77152192-77152211 | None:intergenic | 30.0% | |
! | AACTACATCGGTTATTCATT+TGG | + | chr4_1:77152445-77152464 | Msa0573860:intron | 30.0% |
GCTAGTATTAGCATTGTAAA+AGG | + | chr4_1:77152490-77152509 | Msa0573860:intron | 30.0% | |
AGTATTAGCATTGTAAAAGG+GGG | + | chr4_1:77152493-77152512 | Msa0573860:intron | 30.0% | |
TTATGATATACACAGAGAAG+TGG | + | chr4_1:77152570-77152589 | Msa0573860:intron | 30.0% | |
TATGATATACACAGAGAAGT+GGG | + | chr4_1:77152571-77152590 | Msa0573860:intron | 30.0% | |
TTTGATAAACCAGAAATCCT+AGG | + | chr4_1:77152646-77152665 | Msa0573860:CDS | 30.0% | |
AAATTGTGTACCAAGTGTAA+GGG | - | chr4_1:77152736-77152755 | None:intergenic | 30.0% | |
!!! | TAAAAAGGTTTTGAGCAAAC+TGG | - | chr4_1:77153171-77153190 | None:intergenic | 30.0% |
! | AGAGCATTTATAGTCAATCT+TGG | + | chr4_1:77153235-77153254 | Msa0573860:intron | 30.0% |
AACAGTACTTAAAAAAGCAG+TGG | - | chr4_1:77153350-77153369 | None:intergenic | 30.0% | |
AAGAAGAAGAAGAAAGAGTT+GGG | - | chr4_1:77153527-77153546 | None:intergenic | 30.0% | |
AAAGAAGAAGAAGAAAGAGT+TGG | - | chr4_1:77153528-77153547 | None:intergenic | 30.0% | |
GAAAATTGTAGAAACAAGCA+TGG | - | chr4_1:77153639-77153658 | None:intergenic | 30.0% | |
TTTACAGATTGCGTATTTCT+TGG | + | chr4_1:77153716-77153735 | Msa0573860:intron | 30.0% | |
!! | TTTTCATCTGATTTGCAAGT+TGG | - | chr4_1:77153774-77153793 | None:intergenic | 30.0% |
ATAGTAGTGTTCACTTACTT+GGG | - | chr4_1:77153801-77153820 | None:intergenic | 30.0% | |
GTATGGTTAATAATGGTACA+GGG | + | chr4_1:77153994-77154013 | Msa0573860:intron | 30.0% | |
TATACGGCAAACAATAATCT+TGG | + | chr4_1:77154154-77154173 | Msa0573860:exon | 30.0% | |
AGTGTAAATACCAGGTTAAT+TGG | + | chr4_1:77154236-77154255 | Msa0573860:three_prime_UTR | 30.0% | |
TGATATAGTACCAATTAACC+TGG | - | chr4_1:77154249-77154268 | None:intergenic | 30.0% | |
GAACTGATGTAGTACAATTA+AGG | - | chr4_1:77154325-77154344 | None:intergenic | 30.0% | |
TTGAGAATTGCTTGTGTTTG+AGG | - | chr4_1:77151706-77151725 | None:intergenic | 35.0% | |
TTAACGTTATGGTCGATGTT+AGG | - | chr4_1:77151748-77151767 | None:intergenic | 35.0% | |
AAGACTTTAGTTATTCGCCA+CGG | - | chr4_1:77151894-77151913 | None:intergenic | 35.0% | |
GGTGAAAAATTTCTTGCTCT+GGG | - | chr4_1:77151986-77152005 | None:intergenic | 35.0% | |
! | CATCTTTTCATTGAGAGGAA+GGG | - | chr4_1:77152007-77152026 | None:intergenic | 35.0% |
! | TCATCTTTTCATTGAGAGGA+AGG | - | chr4_1:77152008-77152027 | None:intergenic | 35.0% |
! | GAATAGGAGTATAACCCTTA+TGG | - | chr4_1:77152050-77152069 | None:intergenic | 35.0% |
!!! | GTAATTGGTTTTGAGGATCA+AGG | - | chr4_1:77152083-77152102 | None:intergenic | 35.0% |
GATCCTCAAAACCAATTACA+TGG | + | chr4_1:77152084-77152103 | Msa0573860:CDS | 35.0% | |
!!! | TCTCCATGTAATTGGTTTTG+AGG | - | chr4_1:77152090-77152109 | None:intergenic | 35.0% |
! | TCAATTTTAGATGTTCTGCC+TGG | + | chr4_1:77152280-77152299 | Msa0573860:intron | 35.0% |
TGAGCAAAACTTACAATGCT+CGG | - | chr4_1:77152336-77152355 | None:intergenic | 35.0% | |
! | AAACAAAGGGAGCATACATT+TGG | - | chr4_1:77152400-77152419 | None:intergenic | 35.0% |
GGGAAAATGGAAGGAAAAAA+AGG | + | chr4_1:77152513-77152532 | Msa0573860:intron | 35.0% | |
GAAATTGTGTACCAAGTGTA+AGG | - | chr4_1:77152737-77152756 | None:intergenic | 35.0% | |
AAGAAAATGAACAGCATAGC+TGG | - | chr4_1:77153314-77153333 | None:intergenic | 35.0% | |
AGAAGAAGAAGAAAGAGTTG+GGG | - | chr4_1:77153526-77153545 | None:intergenic | 35.0% | |
!!! | GAAAATTGAACCTGGTTTTG+AGG | - | chr4_1:77153604-77153623 | None:intergenic | 35.0% |
AGCTATCAGAAAATTGAACC+TGG | - | chr4_1:77153612-77153631 | None:intergenic | 35.0% | |
AATTGTAGAAACAAGCATGG+AGG | - | chr4_1:77153636-77153655 | None:intergenic | 35.0% | |
GATAGTAGTGTTCACTTACT+TGG | - | chr4_1:77153802-77153821 | None:intergenic | 35.0% | |
TGCATGAATTTAATTGCACC+TGG | + | chr4_1:77153972-77153991 | Msa0573860:intron | 35.0% | |
GAATTTAATTGCACCTGGTA+TGG | + | chr4_1:77153977-77153996 | Msa0573860:intron | 35.0% | |
GTACCATTATTAACCATACC+AGG | - | chr4_1:77153993-77154012 | None:intergenic | 35.0% | |
GGTATGGTTAATAATGGTAC+AGG | + | chr4_1:77153993-77154012 | Msa0573860:intron | 35.0% | |
TCTGAAAACAGATACAAGCA+AGG | - | chr4_1:77154067-77154086 | None:intergenic | 35.0% | |
GATTTCCTCCTGTATATTAC+CGG | + | chr4_1:77154085-77154104 | Msa0573860:intron | 35.0% | |
ATTTCCTCCTGTATATTACC+GGG | + | chr4_1:77154086-77154105 | Msa0573860:CDS | 35.0% | |
TGTTGTATGTGATGTGAGTG+TGG | - | chr4_1:77151632-77151651 | None:intergenic | 40.0% | |
ACAAGACAGGTACTCCAAAA+TGG | + | chr4_1:77151669-77151688 | Msa0573860:exon | 40.0% | |
CAAGACAGGTACTCCAAAAT+GGG | + | chr4_1:77151670-77151689 | Msa0573860:exon | 40.0% | |
! | AGGAATCTCCTTTCCCATTT+TGG | - | chr4_1:77151686-77151705 | None:intergenic | 40.0% |
GTTATGGTCGATGTTAGGAT+TGG | - | chr4_1:77151743-77151762 | None:intergenic | 40.0% | |
TTTAGTTATTCGCCACGGAA+CGG | - | chr4_1:77151889-77151908 | None:intergenic | 40.0% | |
AAACGTCGTCCATAAAGTCT+TGG | - | chr4_1:77151960-77151979 | None:intergenic | 40.0% | |
GGGTGAAAAATTTCTTGCTC+TGG | - | chr4_1:77151987-77152006 | None:intergenic | 40.0% | |
! | CATTGGTTACGGCCATAAAA+AGG | - | chr4_1:77152168-77152187 | None:intergenic | 40.0% |
! | CTTTTTATGGCCGTAACCAA+TGG | + | chr4_1:77152166-77152185 | Msa0573860:CDS | 40.0% |
! | TTTTAGATGTTCTGCCTGGA+TGG | + | chr4_1:77152284-77152303 | Msa0573860:intron | 40.0% |
GCATTGTAAAAGGGGGAAAA+TGG | + | chr4_1:77152500-77152519 | Msa0573860:intron | 40.0% | |
TGTAAAAGGGGGAAAATGGA+AGG | + | chr4_1:77152504-77152523 | Msa0573860:intron | 40.0% | |
ATAGTGTAGCAAGCGCAAAA+TGG | - | chr4_1:77152683-77152702 | None:intergenic | 40.0% | |
CTATGGTCTGATTACTCTGT+TGG | + | chr4_1:77152852-77152871 | Msa0573860:CDS | 40.0% | |
AGGATGCTAAACCTCAGATA+TGG | + | chr4_1:77153003-77153022 | Msa0573860:CDS | 40.0% | |
GGATGCTAAACCTCAGATAT+GGG | + | chr4_1:77153004-77153023 | Msa0573860:CDS | 40.0% | |
!! | ATTGAAGGGGTTAGTCCTTA+CGG | + | chr4_1:77153040-77153059 | Msa0573860:intron | 40.0% |
AGTCAATCTTGGAGACATGT+TGG | + | chr4_1:77153246-77153265 | Msa0573860:CDS | 40.0% | |
AAATGAACAGCATAGCTGGA+TGG | - | chr4_1:77153310-77153329 | None:intergenic | 40.0% | |
TCTACATTGCACAGAGTCAT+AGG | + | chr4_1:77153473-77153492 | Msa0573860:CDS | 40.0% | |
TTGCACAGAGTCATAGGAAA+TGG | + | chr4_1:77153479-77153498 | Msa0573860:CDS | 40.0% | |
! | TTAGGCTTTTCCTCAAAACC+AGG | + | chr4_1:77153591-77153610 | Msa0573860:intron | 40.0% |
GCACCTGGTATGGTTAATAA+TGG | + | chr4_1:77153987-77154006 | Msa0573860:intron | 40.0% | |
AAGTAGTCCCGGTAATATAC+AGG | - | chr4_1:77154096-77154115 | None:intergenic | 40.0% | |
CATGCTGATCTGCTTGTATA+CGG | + | chr4_1:77154138-77154157 | Msa0573860:CDS | 40.0% | |
ACAATAATCTTGGAGCTGTG+CGG | + | chr4_1:77154164-77154183 | Msa0573860:exon | 40.0% | |
TATGTGATGTGAGTGTGGAC+AGG | - | chr4_1:77151627-77151646 | None:intergenic | 45.0% | |
CAGAGAAGAGAAGACAAGAC+AGG | + | chr4_1:77151656-77151675 | Msa0573860:five_prime_UTR | 45.0% | |
CAGGTACTCCAAAATGGGAA+AGG | + | chr4_1:77151675-77151694 | Msa0573860:exon | 45.0% | |
!! | CTAAAGTCTTGCACCGATTC+TGG | + | chr4_1:77151904-77151923 | Msa0573860:intron | 45.0% |
AACCCTTATGGCTATCGTTG+CGG | - | chr4_1:77152038-77152057 | None:intergenic | 45.0% | |
AAACTTACAATGCTCGGCGT+TGG | - | chr4_1:77152330-77152349 | None:intergenic | 45.0% | |
!! | AAGTGGGAAAAGCACTTGCA+AGG | + | chr4_1:77152587-77152606 | Msa0573860:CDS | 45.0% |
AGGATAATAGCCCTTGCACT+TGG | + | chr4_1:77152607-77152626 | Msa0573860:CDS | 45.0% | |
AATAGCCCTTGCACTTGGTT+TGG | + | chr4_1:77152612-77152631 | Msa0573860:CDS | 45.0% | |
AGCATCCAAACCAAGTGCAA+GGG | - | chr4_1:77152620-77152639 | None:intergenic | 45.0% | |
TAGCATCCAAACCAAGTGCA+AGG | - | chr4_1:77152621-77152640 | None:intergenic | 45.0% | |
AGCAAGCGCAAAATGGCAAT+GGG | - | chr4_1:77152676-77152695 | None:intergenic | 45.0% | |
TAGCAAGCGCAAAATGGCAA+TGG | - | chr4_1:77152677-77152696 | None:intergenic | 45.0% | |
! | TTGCGCTTGCTACACTATCA+AGG | + | chr4_1:77152685-77152704 | Msa0573860:CDS | 45.0% |
! | CTCTTTTGGTCCCTTACACT+TGG | + | chr4_1:77152723-77152742 | Msa0573860:intron | 45.0% |
AAAGTCTCAGATCCCTCACA+AGG | + | chr4_1:77152802-77152821 | Msa0573860:CDS | 45.0% | |
AAGTCTCAGATCCCTCACAA+GGG | + | chr4_1:77152803-77152822 | Msa0573860:CDS | 45.0% | |
GCTGCATATAACCCTTGTGA+GGG | - | chr4_1:77152817-77152836 | None:intergenic | 45.0% | |
AGCTGCATATAACCCTTGTG+AGG | - | chr4_1:77152818-77152837 | None:intergenic | 45.0% | |
TCACAAGGGTTATATGCAGC+TGG | + | chr4_1:77152817-77152836 | Msa0573860:CDS | 45.0% | |
TTGGCAACAGATGATGTCCA+GGG | + | chr4_1:77152871-77152890 | Msa0573860:CDS | 45.0% | |
TGCTAAACCTCAGATATGGG+AGG | + | chr4_1:77153007-77153026 | Msa0573860:CDS | 45.0% | |
GTAAGGACTAACCCCTTCAA+TGG | - | chr4_1:77153041-77153060 | None:intergenic | 45.0% | |
ATTGCGTATTTCTTGGAGCC+TGG | + | chr4_1:77153723-77153742 | Msa0573860:CDS | 45.0% | |
TCCACTAGACAATCATGACC+AGG | - | chr4_1:77153744-77153763 | None:intergenic | 45.0% | |
GTAGTGTTCACTTACTTGGG+AGG | - | chr4_1:77153798-77153817 | None:intergenic | 45.0% | |
TAGTCCCGGTAATATACAGG+AGG | - | chr4_1:77154093-77154112 | None:intergenic | 45.0% | |
!! | AATAATTAATTATCAATTAA+AGG | + | chr4_1:77152948-77152967 | Msa0573860:intron | 5.0% |
GGTCGATGTTAGGATTGGAG+AGG | - | chr4_1:77151738-77151757 | None:intergenic | 50.0% | |
! | ACTTGTTACGTTCCGTTCCG+TGG | + | chr4_1:77151874-77151893 | Msa0573860:intron | 50.0% |
TCTCCGCAACGATAGCCATA+AGG | + | chr4_1:77152032-77152051 | Msa0573860:CDS | 50.0% | |
CTCCGCAACGATAGCCATAA+GGG | + | chr4_1:77152033-77152052 | Msa0573860:CDS | 50.0% | |
! | CTGATGCAGGCCATTGGTTA+CGG | - | chr4_1:77152179-77152198 | None:intergenic | 50.0% |
AAGTACCTGATGCAGGCCAT+TGG | - | chr4_1:77152185-77152204 | None:intergenic | 50.0% | |
TAGATGTTCTGCCTGGATGG+AGG | + | chr4_1:77152287-77152306 | Msa0573860:intron | 50.0% | |
AGATGTTCTGCCTGGATGGA+GGG | + | chr4_1:77152288-77152307 | Msa0573860:intron | 50.0% | |
ATGGGCTCTCCTAGGATTTC+TGG | - | chr4_1:77152658-77152677 | None:intergenic | 50.0% | |
! | AAATGGCAATGGGCTCTCCT+AGG | - | chr4_1:77152666-77152685 | None:intergenic | 50.0% |
! | GCTGGAGCTCATACTGACTA+TGG | + | chr4_1:77152835-77152854 | Msa0573860:CDS | 50.0% |
GTTGGCAACAGATGATGTCC+AGG | + | chr4_1:77152870-77152889 | Msa0573860:CDS | 50.0% | |
AGATGATGTCCAGGGTCTTC+AGG | + | chr4_1:77152879-77152898 | Msa0573860:CDS | 50.0% | |
GCATTCTTACCTGAAGACCC+TGG | - | chr4_1:77152891-77152910 | None:intergenic | 50.0% | |
GAGGACGTGACACCATTGAA+GGG | + | chr4_1:77153026-77153045 | Msa0573860:CDS | 50.0% | |
AGGACGTGACACCATTGAAG+GGG | + | chr4_1:77153027-77153046 | Msa0573860:CDS | 50.0% | |
AGAAAAGCAACAGCGCCGTA+AGG | - | chr4_1:77153058-77153077 | None:intergenic | 50.0% | |
TTGGAGACATGTTGGAACGC+TGG | + | chr4_1:77153254-77153273 | Msa0573860:CDS | 50.0% | |
GCCTGGTCATGATTGTCTAG+TGG | + | chr4_1:77153740-77153759 | Msa0573860:CDS | 50.0% | |
CTACTTGAGTCAGCGCTACA+AGG | + | chr4_1:77154110-77154129 | Msa0573860:CDS | 50.0% | |
CGTAACCAATGGCCTGCATC+AGG | + | chr4_1:77152177-77152196 | Msa0573860:CDS | 55.0% | |
TCCATAGTCTCCCTCCATCC+AGG | - | chr4_1:77152301-77152320 | None:intergenic | 55.0% | |
GTCACGTCCTCCCATATCTG+AGG | - | chr4_1:77153017-77153036 | None:intergenic | 55.0% | |
GGAGGACGTGACACCATTGA+AGG | + | chr4_1:77153025-77153044 | Msa0573860:CDS | 55.0% | |
!! | AGCGCTGACTCAAGTAGTCC+CGG | - | chr4_1:77154107-77154126 | None:intergenic | 55.0% |
AATCTTGGAGCTGTGCGGCT+TGG | + | chr4_1:77154169-77154188 | Msa0573860:exon | 55.0% | |
GCCTGGATGGAGGGAGACTA+TGG | + | chr4_1:77152297-77152316 | Msa0573860:CDS | 60.0% | |
! | TTGGAGCTGTGCGGCTTGGA+AGG | + | chr4_1:77154173-77154192 | Msa0573860:three_prime_UTR | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_1 | gene | 77151613 | 77154410 | 77151613 | ID=Msa0573860;Name=Msa0573860 |
chr4_1 | mRNA | 77151613 | 77154410 | 77151613 | ID=Msa0573860-mRNA-1;Parent=Msa0573860;Name=Msa0573860-mRNA-1;_AED=0.10;_eAED=0.10;_QI=75|1|1|1|0.77|0.9|10|240|327 |
chr4_1 | exon | 77151613 | 77151780 | 77151613 | ID=Msa0573860-mRNA-1:exon:27098;Parent=Msa0573860-mRNA-1 |
chr4_1 | exon | 77151910 | 77152198 | 77151910 | ID=Msa0573860-mRNA-1:exon:27099;Parent=Msa0573860-mRNA-1 |
chr4_1 | exon | 77152290 | 77152341 | 77152290 | ID=Msa0573860-mRNA-1:exon:27100;Parent=Msa0573860-mRNA-1 |
chr4_1 | exon | 77152585 | 77152706 | 77152585 | ID=Msa0573860-mRNA-1:exon:27101;Parent=Msa0573860-mRNA-1 |
chr4_1 | exon | 77152800 | 77152900 | 77152800 | ID=Msa0573860-mRNA-1:exon:27102;Parent=Msa0573860-mRNA-1 |
chr4_1 | exon | 77152990 | 77153048 | 77152990 | ID=Msa0573860-mRNA-1:exon:27103;Parent=Msa0573860-mRNA-1 |
chr4_1 | exon | 77153237 | 77153293 | 77153237 | ID=Msa0573860-mRNA-1:exon:27104;Parent=Msa0573860-mRNA-1 |
chr4_1 | exon | 77153472 | 77153517 | 77153472 | ID=Msa0573860-mRNA-1:exon:27105;Parent=Msa0573860-mRNA-1 |
chr4_1 | exon | 77153723 | 77153802 | 77153723 | ID=Msa0573860-mRNA-1:exon:27106;Parent=Msa0573860-mRNA-1 |
chr4_1 | exon | 77154086 | 77154410 | 77154086 | ID=Msa0573860-mRNA-1:exon:27107;Parent=Msa0573860-mRNA-1 |
chr4_1 | five_prime_UTR | 77151613 | 77151687 | 77151613 | ID=Msa0573860-mRNA-1:five_prime_utr;Parent=Msa0573860-mRNA-1 |
chr4_1 | CDS | 77151688 | 77151780 | 77151688 | ID=Msa0573860-mRNA-1:cds;Parent=Msa0573860-mRNA-1 |
chr4_1 | CDS | 77151910 | 77152198 | 77151910 | ID=Msa0573860-mRNA-1:cds;Parent=Msa0573860-mRNA-1 |
chr4_1 | CDS | 77152290 | 77152341 | 77152290 | ID=Msa0573860-mRNA-1:cds;Parent=Msa0573860-mRNA-1 |
chr4_1 | CDS | 77152585 | 77152706 | 77152585 | ID=Msa0573860-mRNA-1:cds;Parent=Msa0573860-mRNA-1 |
chr4_1 | CDS | 77152800 | 77152900 | 77152800 | ID=Msa0573860-mRNA-1:cds;Parent=Msa0573860-mRNA-1 |
chr4_1 | CDS | 77152990 | 77153048 | 77152990 | ID=Msa0573860-mRNA-1:cds;Parent=Msa0573860-mRNA-1 |
chr4_1 | CDS | 77153237 | 77153293 | 77153237 | ID=Msa0573860-mRNA-1:cds;Parent=Msa0573860-mRNA-1 |
chr4_1 | CDS | 77153472 | 77153517 | 77153472 | ID=Msa0573860-mRNA-1:cds;Parent=Msa0573860-mRNA-1 |
chr4_1 | CDS | 77153723 | 77153802 | 77153723 | ID=Msa0573860-mRNA-1:cds;Parent=Msa0573860-mRNA-1 |
chr4_1 | CDS | 77154086 | 77154170 | 77154086 | ID=Msa0573860-mRNA-1:cds;Parent=Msa0573860-mRNA-1 |
chr4_1 | three_prime_UTR | 77154171 | 77154410 | 77154171 | ID=Msa0573860-mRNA-1:three_prime_utr;Parent=Msa0573860-mRNA-1 |
Gene Sequence |
Protein sequence |