AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0575230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0575230 MtrunA17_Chr8g0392301 98.903 1003 11 0 1 1003 1 1003 0.0 2068
Msa0575230 MtrunA17_Chr5g0447641 53.571 980 399 13 41 994 263 1212 0.0 994
Msa0575230 MtrunA17_Chr8g0377481 52.261 995 398 17 29 994 21 967 0.0 991
Msa0575230 MtrunA17_Chr3g0122391 51.908 996 413 16 25 996 73 1026 0.0 978
Msa0575230 MtrunA17_Chr2g0311191 74.444 180 7 1 320 499 94 234 1.04e-80 262
Msa0575230 MtrunA17_Chr2g0311191 80.882 68 13 0 184 251 21 88 5.43e-30 119
Msa0575230 MtrunA17_Chr3g0136601 36.364 297 170 8 386 680 373 652 5.99e-41 163
Msa0575230 MtrunA17_Chr3g0136601 31.056 161 98 3 847 995 790 949 2.23e-17 87.8
Msa0575230 MtrunA17_Chr1g0150511 34.494 316 179 8 386 680 379 687 6.03e-41 163
Msa0575230 MtrunA17_Chr1g0150511 33.566 143 83 3 863 994 870 1011 1.75e-15 81.6
Msa0575230 MtrunA17_Chr5g0405701 33.036 336 191 7 336 670 462 764 1.74e-40 162
Msa0575230 MtrunA17_Chr5g0405701 31.138 167 74 4 858 998 1047 1198 2.48e-15 81.3
Msa0575230 MtrunA17_Chr8g0371601 34.416 308 152 5 372 670 460 726 5.03e-40 160
Msa0575230 MtrunA17_Chr8g0371601 33.333 162 71 4 844 982 1007 1154 8.24e-17 85.9
Msa0575230 MtrunA17_Chr4g0013831 29.888 358 187 9 377 727 338 638 3.58e-30 128
Msa0575230 MtrunA17_Chr4g0013831 30.201 149 84 4 849 997 607 735 4.84e-11 67.0
Msa0575230 MtrunA17_Chr7g0269631 31.148 305 155 4 377 680 338 588 6.43e-28 120
Msa0575230 MtrunA17_Chr1g0197591 27.446 368 220 13 335 688 328 662 4.82e-24 109
Msa0575230 MtrunA17_Chr1g0197591 38.571 140 62 4 858 990 923 1045 1.72e-16 85.1
Msa0575230 MtrunA17_Chr1g0194741 27.628 333 191 10 340 655 352 651 3.49e-22 102
Msa0575230 MtrunA17_Chr1g0190021 25.481 208 152 1 362 569 350 554 3.55e-17 86.7
Msa0575230 MtrunA17_Chr1g0194731 33.117 154 78 5 846 991 313 449 4.18e-15 79.3
Msa0575230 MtrunA17_Chr7g0274831 21.038 366 232 3 370 735 362 670 1.30e-14 78.6
Msa0575230 MtrunA17_Chr7g0274831 33.871 124 62 3 860 980 638 744 1.05e-11 69.3
Msa0575230 MtrunA17_Chr8g0364781 46.269 67 36 0 864 930 15 81 9.03e-14 69.7
Msa0575230 MtrunA17_Chr8g0343551 40.000 85 34 2 906 990 15 82 3.66e-13 66.2
Msa0575230 MtrunA17_Chr1g0186431 29.530 149 105 0 362 510 344 492 8.81e-12 69.3
Msa0575230 MtrunA17_Chr1g0186431 31.387 137 74 3 856 991 630 747 2.24e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0575230 AT2G01830.1 71.284 989 254 12 25 1003 89 1057 0.0 1403
Msa0575230 AT2G01830.4 71.284 989 254 12 25 1003 89 1057 0.0 1403
Msa0575230 AT2G01830.6 71.284 989 254 12 25 1003 89 1057 0.0 1403
Msa0575230 AT2G01830.3 71.284 989 254 12 25 1003 89 1057 0.0 1403
Msa0575230 AT2G01830.2 71.284 989 254 12 25 1003 112 1080 0.0 1403
Msa0575230 AT2G01830.5 71.284 989 254 12 25 1003 101 1069 0.0 1402
Msa0575230 AT5G35750.1 54.328 1005 393 16 16 995 211 1174 0.0 1019
Msa0575230 AT1G27320.1 54.298 954 367 15 68 996 121 1030 0.0 981
Msa0575230 AT2G17820.1 33.333 345 178 7 336 670 451 753 4.52e-42 168
Msa0575230 AT5G10720.1 35.254 295 142 6 386 680 369 614 9.08e-41 163
Msa0575230 AT5G10720.1 34.028 144 83 2 862 994 779 921 4.12e-16 84.0
Msa0575230 AT1G66340.1 28.112 466 255 11 377 835 337 729 3.07e-35 144
Msa0575230 AT1G66340.1 28.058 139 84 3 860 997 609 732 3.60e-11 67.8
Msa0575230 AT2G47430.1 30.723 332 183 11 372 690 384 681 1.17e-30 131
Msa0575230 AT2G47430.1 37.063 143 59 5 857 983 982 1109 1.31e-16 85.9
Msa0575230 AT2G40940.1 30.952 336 167 7 356 680 306 587 1.34e-27 119
Msa0575230 AT3G04580.2 32.450 151 80 5 848 996 633 763 3.83e-13 74.3
Msa0575230 AT3G04580.1 32.450 151 80 5 848 996 633 763 3.83e-13 74.3
Msa0575230 AT4G18130.1 31.034 145 98 2 388 531 875 1018 2.53e-11 68.6

Find 282 sgRNAs with CRISPR-Local

Find 413 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTTCTTCACCTCAGTTAT+TGG 0.154797 4_1:-79037663 None:intergenic
TGAATTCCATTTACCTATAT+TGG 0.177421 4_1:+79039096 Msa0575230:CDS
TGTCATGAATCTACTGAAAT+AGG 0.183473 4_1:-79039247 None:intergenic
CATGAAAGTAAGCTTGATTT+TGG 0.185418 4_1:+79035939 Msa0575230:CDS
CAAACATACCCGTCCATTTC+TGG 0.199510 4_1:-79038620 None:intergenic
TGCTGGTCATCAAGCAATTT+TGG 0.203159 4_1:+79035833 Msa0575230:CDS
TCCAGTTTGGCGGTGCCTTC+TGG 0.219637 4_1:-79036095 None:intergenic
GAAGGGAGAAGGTGCTTCTT+TGG 0.243297 4_1:+79034051 Msa0575230:five_prime_UTR
AGCTTGCCTTCAGCAAGTTT+TGG 0.267697 4_1:+79038358 Msa0575230:CDS
TGAGAACCCAACAACCTAAA+AGG 0.270552 4_1:-79035372 None:intergenic
TTCTCAAATTAATGTTTCTA+TGG 0.271180 4_1:+79034634 Msa0575230:CDS
CAAGTTTGATGCTTGCTTCA+TGG 0.271579 4_1:+79038586 Msa0575230:CDS
AGTGAGAAGGAAAGAGGTTT+TGG 0.273718 4_1:+79034716 Msa0575230:CDS
TGAACTCCTCTTCATATCTA+TGG 0.281379 4_1:-79034450 None:intergenic
CAAAATCAAGCTTACTTTCA+TGG 0.285290 4_1:-79035938 None:intergenic
ATTGGTTGCCATACATGATT+AGG 0.295381 4_1:-79035890 None:intergenic
ATACTTACTTCCCTATTAGA+AGG 0.299683 4_1:+79039532 Msa0575230:three_prime_UTR
CTCTTTACTTACTTACTCAT+TGG 0.305431 4_1:+79033811 Msa0575230:five_prime_UTR
GGCTTTAAGCCCTCTAAAAC+TGG 0.307736 4_1:-79037706 None:intergenic
TCATGGCCAATATAGGTAAA+TGG 0.311222 4_1:-79039102 None:intergenic
AAAACTCTTCATCAGCAATT+AGG 0.316824 4_1:-79037344 None:intergenic
GAAGAGGAGTTCAAAGAAAT+AGG 0.317611 4_1:+79034460 Msa0575230:five_prime_UTR
TTGAAGCAACCCGTCGAATT+CGG 0.323737 4_1:+79039017 Msa0575230:CDS
GTAAGAAAGCACATATAAAA+AGG 0.325246 4_1:+79033646 Msa0575230:five_prime_UTR
GGATCTCCCATAACAATATC+TGG 0.330567 4_1:-79036937 None:intergenic
CAGAAGGGTTTCTGTAATAA+TGG 0.331115 4_1:-79034833 None:intergenic
TAACAAGCTCAAAGTTTGAT+TGG 0.336384 4_1:+79039380 Msa0575230:three_prime_UTR
CTGCTGATGAACGCAACAAC+TGG 0.339209 4_1:+79037307 Msa0575230:CDS
AGCTCGACTTCTAGAAATTA+TGG 0.341838 4_1:+79037507 Msa0575230:CDS
CTTAAAGCCGTTGTGGTTGA+TGG 0.345003 4_1:+79037720 Msa0575230:CDS
AATGAACTTTAACAAATATA+TGG 0.345150 4_1:-79037164 None:intergenic
ATCATTTGATGTTTCCTGTA+TGG 0.346790 4_1:-79035966 None:intergenic
GTGTTAGTTGGTGTTGTAAT+GGG 0.349487 4_1:+79034501 Msa0575230:exon
TTTGTGATTCTTCTATTAAT+CGG 0.350778 4_1:+79036144 Msa0575230:CDS
TGAAGCAACCCGTCGAATTC+GGG 0.359689 4_1:+79039018 Msa0575230:CDS
TTCGAAAGGCCGCTACTTAG+TGG 0.361977 4_1:+79035014 Msa0575230:CDS
ATTGTATCCTATTCCTATAC+AGG 0.362663 4_1:+79033765 Msa0575230:five_prime_UTR
GGATATTCAAATGCCAGAAA+TGG 0.363538 4_1:+79038607 Msa0575230:CDS
AGAGAGGACATCATCGAGTA+TGG 0.366813 4_1:-79036717 None:intergenic
TAATGAGCTCTTCTGTTGTT+GGG 0.368418 4_1:-79035449 None:intergenic
TTCCTTTCTCGGCCCAAGAT+AGG 0.368808 4_1:+79037457 Msa0575230:CDS
TTATGAACAAGTCACCTTGA+TGG 0.371342 4_1:+79037407 Msa0575230:CDS
AATTTACTTGGTCAACTTGC+TGG 0.372381 4_1:+79035816 Msa0575230:CDS
TCGTATCATCTACAGCAAAA+TGG 0.372950 4_1:+79034680 Msa0575230:CDS
TTAATGAGCTCTTCTGTTGT+TGG 0.375076 4_1:-79035450 None:intergenic
TAAGTGCCTAGTTGAACTAA+TGG 0.375538 4_1:+79037557 Msa0575230:CDS
ACCAGAAGGCACCGCCAAAC+TGG 0.378771 4_1:+79036094 Msa0575230:CDS
CTAGTCACAGCAGCTCTAAC+AGG 0.385909 4_1:-79037747 None:intergenic
AAGGCATGAAAATCCTATCT+TGG 0.386310 4_1:-79037470 None:intergenic
TCAAGCTTTCCATTTGTTGC+GGG 0.386642 4_1:-79037204 None:intergenic
GGGAGCTTAGATTTGTAAAC+AGG 0.386741 4_1:-79035420 None:intergenic
GATCTTCAGTGTGCGCCAAC+TGG 0.387077 4_1:+79038190 Msa0575230:CDS
TCTTTACTTACTTACTCATT+GGG 0.387653 4_1:+79033812 Msa0575230:five_prime_UTR
GAAACAATGTTTACCTGTAT+AGG 0.388064 4_1:-79033778 None:intergenic
GGTTGACACTAACACTGAAT+TGG 0.390644 4_1:-79034776 None:intergenic
TTGGTTGCCATACATGATTA+GGG 0.392434 4_1:-79035889 None:intergenic
TCTGCTGTCATGGCCAATAT+AGG 0.397938 4_1:-79039109 None:intergenic
AAAGAGAGGCTTCACCGGTT+AGG 0.399569 4_1:+79035117 Msa0575230:CDS
AGTCGCAAATGCCATCAATA+AGG 0.400064 4_1:+79037803 Msa0575230:CDS
AAACATCACCTTCTTCGTAT+TGG 0.401351 4_1:-79035908 None:intergenic
AAAGTTCCAGATATTGTTAT+GGG 0.403106 4_1:+79036931 Msa0575230:CDS
GAAGCCACTGAGAGCTAGTA+TGG 0.403349 4_1:+79038331 Msa0575230:CDS
AAGAGAGGCTTCACCGGTTA+GGG 0.409347 4_1:+79035118 Msa0575230:CDS
TAAAGTTCCAGATATTGTTA+TGG 0.411623 4_1:+79036930 Msa0575230:CDS
TAAAGATTCTCTTCCTCAAA+AGG 0.411974 4_1:-79039193 None:intergenic
TGGGTAGTCTTTGTGATCAA+AGG 0.412517 4_1:+79034736 Msa0575230:CDS
AACAGAAAGCCCGCAACAAA+TGG 0.414966 4_1:+79037195 Msa0575230:CDS
GAAAGAGATTCAGTGTTAGT+TGG 0.415852 4_1:+79034489 Msa0575230:five_prime_UTR
GTTTCTATGGATTCTTCTGA+TGG 0.417958 4_1:+79034647 Msa0575230:CDS
CGAACTGAAGTTGAACCATT+AGG 0.418453 4_1:-79038416 None:intergenic
TGTGTCGAAGACACTGGAAT+TGG 0.420012 4_1:+79037432 Msa0575230:CDS
CTCAAGCTTTCCATTTGTTG+CGG 0.424158 4_1:-79037205 None:intergenic
TGCTAATATTCGTAGCTAGA+AGG 0.425603 4_1:-79038256 None:intergenic
TCAGTGTGCGCCAACTGGAC+TGG 0.427277 4_1:+79038195 Msa0575230:CDS
ATGTAGCCGACCCCACTTAG+TGG 0.427804 4_1:-79039784 None:intergenic
CAAATTGTAACAAATCTTGT+TGG 0.428971 4_1:+79036973 Msa0575230:CDS
ATGTTTACCTGTATAGGAAT+AGG 0.431158 4_1:-79033772 None:intergenic
TGGAATTGGAATTCCTTTCT+CGG 0.432442 4_1:+79037446 Msa0575230:CDS
AGTGTTAGTTGGTGTTGTAA+TGG 0.432775 4_1:+79034500 Msa0575230:exon
GATATTGTTATGGGAGATCC+TGG 0.437067 4_1:+79036940 Msa0575230:CDS
GTCTAGACACAAAGGTTTAG+AGG 0.439244 4_1:+79036754 Msa0575230:CDS
CTTCTGTTGTTGGGTTGTGA+GGG 0.443892 4_1:-79035440 None:intergenic
TTACCTAAAATGCCATTCAT+AGG 0.447126 4_1:-79036408 None:intergenic
TTCAAAGTTACAAGAACAAA+CGG 0.447804 4_1:+79034569 Msa0575230:CDS
AATTATGGTGGTACCGGCAT+TGG 0.449454 4_1:+79037522 Msa0575230:CDS
ATAATGAGAGCTAGAGCTAC+TGG 0.450935 4_1:+79035330 Msa0575230:CDS
TTATAGCATGTTCACACTAC+TGG 0.452704 4_1:+79039284 Msa0575230:three_prime_UTR
GCAGAATCAGCACCACCCTT+TGG 0.456173 4_1:+79034545 Msa0575230:CDS
CATTCTGTTTCCAGTCCAGT+TGG 0.457489 4_1:-79038205 None:intergenic
GACGAACCAACCAACCAATC+TGG 0.460233 4_1:+79033728 Msa0575230:five_prime_UTR
GGGTAGTCTTTGTGATCAAA+GGG 0.462700 4_1:+79034737 Msa0575230:CDS
GCTAGGGATGATGAGTTATG+AGG 0.462731 4_1:-79039436 None:intergenic
TCCAATAACTGAGGTGAAGA+AGG 0.463469 4_1:+79037662 Msa0575230:CDS
CTCCATCTCCCGAATTCGAC+GGG 0.465670 4_1:-79039026 None:intergenic
AAGAGCAGCTTTGCCGCTAT+CGG 0.467101 4_1:-79038543 None:intergenic
TCTTCTGTTGTTGGGTTGTG+AGG 0.467157 4_1:-79035441 None:intergenic
ACTAAGTGGGGTCGGCTACA+TGG 0.470126 4_1:+79039786 Msa0575230:three_prime_UTR
AGGCATGAAAATCCTATCTT+GGG 0.473309 4_1:-79037469 None:intergenic
GTTTGTCTTTGAGCAAAGAC+TGG 0.476755 4_1:+79033962 Msa0575230:intron
ATAGAAGAATCACAAAGAAT+AGG 0.477698 4_1:-79036137 None:intergenic
AATAAGGCTGTTTCCTTGTG+TGG 0.480317 4_1:+79037819 Msa0575230:CDS
TCACTTGTGGAAAATTTACT+TGG 0.482007 4_1:+79035804 Msa0575230:CDS
AGATACCATTTGAAGAGACT+TGG 0.482768 4_1:+79037768 Msa0575230:CDS
GTCAAATAAACTTTATAAGC+CGG 0.482875 4_1:+79037583 Msa0575230:CDS
ACTGATCCCCTAATCATGTA+TGG 0.483235 4_1:+79035882 Msa0575230:CDS
GAGCTATCTGCCTGAACAAA+AGG 0.486203 4_1:-79037489 None:intergenic
CATGGGTTTGTGGAGAGGAC+GGG 0.486989 4_1:+79038168 Msa0575230:CDS
TCAAAGTTACAAGAACAAAC+GGG 0.487197 4_1:+79034570 Msa0575230:CDS
TCATGGGTTTGTGGAGAGGA+CGG 0.487640 4_1:+79038167 Msa0575230:CDS
GGTGCATACTCATCCCTAAC+CGG 0.487653 4_1:-79035131 None:intergenic
AGTATGGAACGAAGGTCAAA+TGG 0.489767 4_1:-79036701 None:intergenic
CAAGGAAACAGCCTTATTGA+TGG 0.489776 4_1:-79037814 None:intergenic
AAGTGCCTAGTTGAACTAAT+GGG 0.492093 4_1:+79037558 Msa0575230:CDS
AGGCGCCTGCAGCCACCCTC+CGG 0.492109 4_1:-79038490 None:intergenic
CTTGTAACTTTGAAGCCAAA+GGG 0.494324 4_1:-79034560 None:intergenic
GTAGAAAGTGCTGTCCAGTT+TGG 0.494912 4_1:-79036108 None:intergenic
TCAGTTCGAAGCCTTCTGTT+CGG 0.494919 4_1:+79038431 Msa0575230:CDS
TCATTCAAGCACATAGAGCT+TGG 0.496464 4_1:+79034610 Msa0575230:CDS
GAGAACCCAACAACCTAAAA+GGG 0.497618 4_1:-79035371 None:intergenic
ATCCTATCTTGGGCCGAGAA+AGG 0.498744 4_1:-79037459 None:intergenic
GTATCCCAAGTCTCTTCAAA+TGG 0.499078 4_1:-79037773 None:intergenic
AAGCTTGAGACTTATCGAAA+TGG 0.503401 4_1:+79037219 Msa0575230:CDS
GGAAACATCAAATGATATGT+AGG 0.503498 4_1:+79035973 Msa0575230:CDS
AAAATCCGCGGTAAATGAAA+AGG 0.506447 4_1:-79037622 None:intergenic
TTGAGACCAGATTGGTTGGT+TGG 0.506596 4_1:-79033734 None:intergenic
GGATGATTTCCACGAAATGC+AGG 0.506772 4_1:+79036209 Msa0575230:CDS
GAGTCGATTGATATGATGTC+TGG 0.510772 4_1:+79035188 Msa0575230:CDS
GATGGAGAGGACAGCGAATG+AGG 0.511200 4_1:+79039042 Msa0575230:CDS
TTAATTGGAGGCAGATATGT+TGG 0.514349 4_1:+79035762 Msa0575230:intron
TTTATAAGCCGGCCGCAGGT+TGG 0.515174 4_1:+79037594 Msa0575230:CDS
CTGGGAAAAGAGACGCCTAA+TGG 0.517830 4_1:+79038401 Msa0575230:CDS
TCTTGTAACTTTGAAGCCAA+AGG 0.517848 4_1:-79034561 None:intergenic
TGCACCGGTCATATTTGCTC+AGG 0.519789 4_1:+79035148 Msa0575230:CDS
TTAAAGCCGTTGTGGTTGAT+GGG 0.520906 4_1:+79037721 Msa0575230:CDS
TGAAGCTGGCAAATTAGAGC+TGG 0.522160 4_1:+79036670 Msa0575230:CDS
ATGAAGAGTGTTTGAAATGT+GGG 0.523905 4_1:+79039149 Msa0575230:CDS
GAAATTAGAACACCTATGAA+TGG 0.524054 4_1:+79036396 Msa0575230:CDS
TATAATCTCAAAACGCTAAG+TGG 0.524296 4_1:+79037276 Msa0575230:CDS
GGAGAATCTATACACAAGCT+AGG 0.524505 4_1:-79039453 None:intergenic
AACAGGCAAGAAGAGACAGC+TGG 0.524546 4_1:+79038382 Msa0575230:CDS
TTGTTCATAAAATTCATTCG+AGG 0.525613 4_1:-79037394 None:intergenic
AACACTCTTCATATGTAGCA+TGG 0.525664 4_1:-79039138 None:intergenic
AATATTGGCTGTTGAGAGAA+GGG 0.525734 4_1:+79034034 Msa0575230:five_prime_UTR
CTTTGATGTGGAGTCACTTG+TGG 0.526300 4_1:+79035791 Msa0575230:CDS
TGTATGATTGTAGGAATGCT+TGG 0.526473 4_1:+79036533 Msa0575230:intron
TCTCCATCTCCCGAATTCGA+CGG 0.527286 4_1:-79039027 None:intergenic
TAATATTGGCTGTTGAGAGA+AGG 0.528670 4_1:+79034033 Msa0575230:five_prime_UTR
CATCTACAGCAAAATGGACG+TGG 0.529606 4_1:+79034686 Msa0575230:CDS
TATAGATTCTCCCAAGGGAA+AGG 0.529959 4_1:+79039464 Msa0575230:three_prime_UTR
TCTAGAAATTATGGTGGTAC+CGG 0.530180 4_1:+79037516 Msa0575230:CDS
ATGGATTACATCTGCTGTCA+TGG 0.530208 4_1:-79039119 None:intergenic
TTCAAATGCCAGAAATGGAC+GGG 0.532095 4_1:+79038612 Msa0575230:CDS
TACTTACTTCCCTATTAGAA+GGG 0.532863 4_1:+79039533 Msa0575230:three_prime_UTR
TACTAAAGTGAGAAGGAAAG+AGG 0.533010 4_1:+79034710 Msa0575230:CDS
GTAAACCGGAGGGTGGCTGC+AGG 0.533229 4_1:+79038485 Msa0575230:CDS
AGAGAGTAACAATATATATG+AGG 0.533603 4_1:+79039320 Msa0575230:three_prime_UTR
AATGGAAAGAGAGGCTTCAC+CGG 0.534549 4_1:+79035112 Msa0575230:CDS
AAACCCTTCTGCCATTGACC+AGG 0.535215 4_1:+79034845 Msa0575230:CDS
AGCCGATGTTGCCAAGTCAC+AGG 0.537666 4_1:+79036254 Msa0575230:CDS
TAAGTCTTATTCCACTAAGT+GGG 0.538004 4_1:+79039773 Msa0575230:three_prime_UTR
ATGGTCTGTGTCGAAGACAC+TGG 0.538586 4_1:+79037426 Msa0575230:CDS
TCAAGTACAAACCTGGTCAA+TGG 0.538725 4_1:-79034856 None:intergenic
ATATGTTCCCAAGAAAATGT+TGG 0.539697 4_1:+79039624 Msa0575230:three_prime_UTR
AAACTTTATAAGCCGGCCGC+AGG 0.541024 4_1:+79037590 Msa0575230:CDS
GACTTCTAATCATGCTCTCT+AGG 0.541306 4_1:-79033992 None:intergenic
TGTTTGAAATGTGGGATGGA+TGG 0.544805 4_1:+79039157 Msa0575230:CDS
CAGTAATAAAGATTTGAGCT+TGG 0.545741 4_1:+79039727 Msa0575230:three_prime_UTR
ACAGTTGAGACCAGATTGGT+TGG 0.545899 4_1:-79033738 None:intergenic
TTTGATAAAGCTAAATCCGC+AGG 0.546457 4_1:+79038287 Msa0575230:CDS
CTGTTCCCAAAACTTGCTGA+AGG 0.546763 4_1:-79038364 None:intergenic
CTAGGGATGATGAGTTATGA+GGG 0.547262 4_1:-79039435 None:intergenic
AACCCGTCGAATTCGGGAGA+TGG 0.547793 4_1:+79039024 Msa0575230:CDS
TTGTTGGGTTCTCATCATCT+CGG 0.549046 4_1:+79035381 Msa0575230:CDS
ATAAGGCTGTTTCCTTGTGT+GGG 0.549996 4_1:+79037820 Msa0575230:CDS
GAGCTCATTAAAGCGACCGC+AGG 0.550704 4_1:+79035462 Msa0575230:CDS
TGCTGATGAACGCAACAACT+GGG 0.552352 4_1:+79037308 Msa0575230:CDS
ATTTAGAATGTGATTGATGT+GGG 0.554152 4_1:+79039653 Msa0575230:three_prime_UTR
GTTAACAACTCTTTGTGCAT+AGG 0.556014 4_1:-79035042 None:intergenic
GACCGAGCGAAAATTGAAGC+TGG 0.556250 4_1:+79036656 Msa0575230:CDS
CTAAGTCTTATTCCACTAAG+TGG 0.556472 4_1:+79039772 Msa0575230:three_prime_UTR
GAGAAGGATTCATGGGTTTG+TGG 0.557947 4_1:+79038158 Msa0575230:CDS
ATTGGAGGCAGATATGTTGG+AGG 0.558944 4_1:+79035765 Msa0575230:intron
ATAGATTCTCCCAAGGGAAA+GGG 0.559943 4_1:+79039465 Msa0575230:three_prime_UTR
AGTCTGAGCATAGTCACGTT+GGG 0.560336 4_1:-79036585 None:intergenic
GTAGCTAGAAGGATCATTTG+AGG 0.560581 4_1:-79038245 None:intergenic
AATGAGTAAGTAAGTAAAGA+GGG 0.560603 4_1:-79033809 None:intergenic
GAAAGTGCTGTCCAGTTTGG+CGG 0.560983 4_1:-79036105 None:intergenic
GGATTCATGGGTTTGTGGAG+AGG 0.561266 4_1:+79038163 Msa0575230:CDS
AGGTGCTTCCAACCTGCGGC+CGG 0.562519 4_1:-79037602 None:intergenic
GACTGCTCAAGCATGTGGTA+AGG 0.562826 4_1:+79036604 Msa0575230:CDS
GATACCATTTGAAGAGACTT+GGG 0.564437 4_1:+79037769 Msa0575230:CDS
ACTGATACTCAAACCAATGC+CGG 0.566091 4_1:-79037535 None:intergenic
TATGAAGAGTGTTTGAAATG+TGG 0.566182 4_1:+79039148 Msa0575230:CDS
ACAATTTGTCTGAATCTCCC+AGG 0.568802 4_1:-79036958 None:intergenic
AAGGAAAAGTACCTGTGACT+TGG 0.570868 4_1:-79036265 None:intergenic
CACAAGTGACTCCACATCAA+AGG 0.571996 4_1:-79035790 None:intergenic
TATAAAGACAATGGAAAGAG+AGG 0.575171 4_1:+79035103 Msa0575230:CDS
GTTTGAGAAGCAGCATGGAG+TGG 0.575227 4_1:+79035079 Msa0575230:CDS
TAGAGGGCTTAAAGCCGTTG+TGG 0.575392 4_1:+79037713 Msa0575230:CDS
GTTTCCTGAGCAAATATGAC+CGG 0.576507 4_1:-79035152 None:intergenic
GAACACAGTTGAGACCAGAT+TGG 0.577362 4_1:-79033742 None:intergenic
CAATGAGTAAGTAAGTAAAG+AGG 0.578204 4_1:-79033810 None:intergenic
CTTGAGACTTATCGAAATGG+AGG 0.580908 4_1:+79037222 Msa0575230:CDS
TATGGCAACCAATACGAAGA+AGG 0.582214 4_1:+79035900 Msa0575230:CDS
CCACTGAGAGCTAGTATGGT+GGG 0.584057 4_1:+79038335 Msa0575230:CDS
TACCTGTGACTTGGCAACAT+CGG 0.584979 4_1:-79036256 None:intergenic
AATTTAGAATGTGATTGATG+TGG 0.585743 4_1:+79039652 Msa0575230:three_prime_UTR
GGACTTCCATAGATATGAAG+AGG 0.585973 4_1:+79034444 Msa0575230:five_prime_UTR
CTTATTCCACTAAGTGGGGT+CGG 0.587503 4_1:+79039778 Msa0575230:three_prime_UTR
CTTAAATATTCCAAAATCCG+CGG 0.588225 4_1:-79037634 None:intergenic
GGCTGTTGAGAGAAGGGAGA+AGG 0.588770 4_1:+79034040 Msa0575230:five_prime_UTR
GAGAATCTATACACAAGCTA+GGG 0.589731 4_1:-79039452 None:intergenic
GCTTGGTCTGCTTCTACGCA+CGG 0.590241 4_1:+79036550 Msa0575230:CDS
ATTCAAATGCCAGAAATGGA+CGG 0.591431 4_1:+79038611 Msa0575230:CDS
GTCGAATTCGGGAGATGGAG+AGG 0.591854 4_1:+79039029 Msa0575230:CDS
AGCAAGCATCAAACTTGTGA+GGG 0.592861 4_1:-79038580 None:intergenic
TAATGAGAGCTAGAGCTACT+GGG 0.593885 4_1:+79035331 Msa0575230:CDS
TGGAGTGGTTATAAAGACAA+TGG 0.596726 4_1:+79035094 Msa0575230:CDS
CAAACCTGGTCAATGGCAGA+AGG 0.599149 4_1:-79034849 None:intergenic
TTGATGACAATGGAGTAAAC+CGG 0.599633 4_1:+79038471 Msa0575230:CDS
ACTCTTCATCAGCAATTAGG+TGG 0.601724 4_1:-79037341 None:intergenic
GAGCAGTTTGAGAAGCAGCA+TGG 0.604333 4_1:+79035074 Msa0575230:CDS
ATGGAAAGTTGAAACAAGGA+TGG 0.605809 4_1:-79034814 None:intergenic
ACAGGCAAGAAGAGACAGCT+GGG 0.606308 4_1:+79038383 Msa0575230:CDS
GAGGAGACGAATGGTGAATG+TGG 0.607644 4_1:+79039061 Msa0575230:CDS
GGAGCTAAAAGTTCGAGCAG+AGG 0.610100 4_1:+79036230 Msa0575230:CDS
CAACTGGACTGGAAACAGAA+TGG 0.610211 4_1:+79038206 Msa0575230:CDS
GGATGGCAAGAGCATGAACA+TGG 0.613468 4_1:-79034797 None:intergenic
AAGCAAGCATCAAACTTGTG+AGG 0.615739 4_1:-79038581 None:intergenic
CAGTCTGAGCATAGTCACGT+TGG 0.615929 4_1:-79036586 None:intergenic
AAGTAGCGGCCTTTCGAAAG+CGG 0.618779 4_1:-79035009 None:intergenic
TTGTGTATAGATTCTCCCAA+GGG 0.619935 4_1:+79039459 Msa0575230:three_prime_UTR
TTAAGCCCTCTAAAACTGGA+TGG 0.620083 4_1:-79037702 None:intergenic
GATGTGAAGTGTGCCGATAG+CGG 0.620620 4_1:+79038530 Msa0575230:CDS
TCAGAGAAGTCTAGACACAA+AGG 0.620996 4_1:+79036746 Msa0575230:CDS
AGCTCATTAAAGCGACCGCA+GGG 0.621429 4_1:+79035463 Msa0575230:CDS
TGGTTGCCATACATGATTAG+GGG 0.623830 4_1:-79035888 None:intergenic
AGAGTGTTTGAAATGTGGGA+TGG 0.624246 4_1:+79039153 Msa0575230:CDS
TGCACAAAGAGTTGTTAACT+CGG 0.624623 4_1:+79035046 Msa0575230:CDS
TGTTGGAGGATCCTTTGATG+TGG 0.629395 4_1:+79035779 Msa0575230:CDS
GTCTTCGACACAGACCATCA+AGG 0.633984 4_1:-79037421 None:intergenic
TTGAGACTTATCGAAATGGA+GGG 0.635447 4_1:+79037223 Msa0575230:CDS
CGGCTAGGACCGCTTTCGAA+AGG 0.636060 4_1:+79035000 Msa0575230:CDS
TTTGTACAGGTATCACCAGA+AGG 0.636717 4_1:+79036080 Msa0575230:intron
AAACCTGGTCAATGGCAGAA+GGG 0.636822 4_1:-79034848 None:intergenic
TGGCAAATTAGAGCTGGAAG+CGG 0.637994 4_1:+79036676 Msa0575230:CDS
CTTGTGTATAGATTCTCCCA+AGG 0.638384 4_1:+79039458 Msa0575230:three_prime_UTR
CGAATGGTGAATGTGGTGAA+AGG 0.638437 4_1:+79039068 Msa0575230:CDS
GGGTTCTCATCATCTCGGTG+TGG 0.642737 4_1:+79035386 Msa0575230:CDS
AAAATGGTGCTTCCAGCACA+GGG 0.643044 4_1:+79037844 Msa0575230:CDS
GAATCATATTGTCAAAGTAG+AGG 0.643202 4_1:+79036188 Msa0575230:CDS
ATACTGCAGTTCACTGAGCG+AGG 0.645750 4_1:+79037141 Msa0575230:intron
GACCACCCATTAGTTCAACT+AGG 0.646099 4_1:-79037563 None:intergenic
GGTTAGGGATGAGTATGCAC+CGG 0.649698 4_1:+79035133 Msa0575230:CDS
GCCACTGAGAGCTAGTATGG+TGG 0.649946 4_1:+79038334 Msa0575230:CDS
GTAACTTTGAAGCCAAAGGG+TGG 0.650789 4_1:-79034557 None:intergenic
GCTCAGACTGCTCAAGCATG+TGG 0.653633 4_1:+79036599 Msa0575230:CDS
ACAGCGAATGAGGAGACGAA+TGG 0.654884 4_1:+79039052 Msa0575230:CDS
CACCGTATCACTAAAACCTG+CGG 0.656600 4_1:-79038303 None:intergenic
AATAATGGAAAGTTGAAACA+AGG 0.658333 4_1:-79034818 None:intergenic
GATTGATATGATGTCTGGAG+AGG 0.658590 4_1:+79035193 Msa0575230:CDS
AAGTCTTATTCCACTAAGTG+GGG 0.658883 4_1:+79039774 Msa0575230:three_prime_UTR
ACATCATATCAATCGACTCA+AGG 0.660613 4_1:-79035184 None:intergenic
TAGGGATGATGAGTTATGAG+GGG 0.663265 4_1:-79039434 None:intergenic
GAAGTTGTGCATGCATCTAG+CGG 0.666517 4_1:+79037252 Msa0575230:CDS
TAAGAAGAATCCAATAACTG+AGG 0.666691 4_1:+79037653 Msa0575230:CDS
ATATTGTTATGGGAGATCCT+GGG 0.667347 4_1:+79036941 Msa0575230:CDS
CAATGGAGTAAACCGGAGGG+TGG 0.669359 4_1:+79038478 Msa0575230:CDS
CATCATCGAGTATGGAACGA+AGG 0.675752 4_1:-79036709 None:intergenic
TGCCTAGTTGAACTAATGGG+TGG 0.680573 4_1:+79037561 Msa0575230:CDS
AAGGCCGCTACTTAGTGGAG+TGG 0.681896 4_1:+79035019 Msa0575230:CDS
GAAAAGGTGCTTCCAACCTG+CGG 0.683040 4_1:-79037606 None:intergenic
TCGACTTCTAGAAATTATGG+TGG 0.683726 4_1:+79037510 Msa0575230:CDS
ATCTACAGCAAAATGGACGT+GGG 0.684272 4_1:+79034687 Msa0575230:CDS
ATGACAATGGAGTAAACCGG+AGG 0.689272 4_1:+79038474 Msa0575230:CDS
TGACAATGGAGTAAACCGGA+GGG 0.689626 4_1:+79038475 Msa0575230:CDS
CAAAGTTACAAGAACAAACG+GGG 0.690015 4_1:+79034571 Msa0575230:CDS
ACGTGGGTACTAAAGTGAGA+AGG 0.690355 4_1:+79034703 Msa0575230:CDS
AACTAAGAAAATCTTATACG+AGG 0.694446 4_1:-79039590 None:intergenic
AGGTTTCCCATCAACCACAA+CGG 0.697501 4_1:-79037727 None:intergenic
CCCACCATACTAGCTCTCAG+TGG 0.729319 4_1:-79038335 None:intergenic
TAGGCCACTCCACTAAGTAG+CGG 0.749192 4_1:-79035023 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAATTTTTAATTCATAATAT+TGG + chr4_1:79034019-79034038 Msa0575230:five_prime_UTR 10.0%
!! AAAAAAAAAAAAAAAACAAG+CGG - chr4_1:79035247-79035266 None:intergenic 10.0%
!!! TGTTTTTTTTTTTTTTTTTG+TGG + chr4_1:79035249-79035268 Msa0575230:intron 10.0%
!! TTCATAATAATATCTTAATT+TGG + chr4_1:79036822-79036841 Msa0575230:intron 10.0%
!!! ATCGATTATTAATTTTTTTT+TGG + chr4_1:79038648-79038667 Msa0575230:intron 10.0%
!!! TTTTTTTGTTTTGTTTAGTA+TGG + chr4_1:79033864-79033883 Msa0575230:intron 15.0%
!!! CAAACTTTTTTATACTATAT+AGG - chr4_1:79034399-79034418 None:intergenic 15.0%
!!! TTTTTTTTTTTTTTTTGTGG+AGG + chr4_1:79035252-79035271 Msa0575230:intron 15.0%
!! TATTATTATGAAACTTGTAT+TGG - chr4_1:79036814-79036833 None:intergenic 15.0%
!! AGGTAAAATGAAAAAAAAAA+AGG - chr4_1:79036883-79036902 None:intergenic 15.0%
!! AATGAACTTTAACAAATATA+TGG - chr4_1:79037167-79037186 None:intergenic 15.0%
!! ATTAACTGAGTTAAAATATT+TGG + chr4_1:79038098-79038117 Msa0575230:intron 15.0%
!! ATATACAAACAAATATAGTA+TGG - chr4_1:79038901-79038920 None:intergenic 15.0%
!! AGAGAAAGAATTAAAAAGAA+GGG - chr4_1:79034125-79034144 None:intergenic 20.0%
!! AAGAGAAAGAATTAAAAAGA+AGG - chr4_1:79034126-79034145 None:intergenic 20.0%
!!! ACTGTTAATTGAGTATTTTT+TGG + chr4_1:79034422-79034441 Msa0575230:five_prime_UTR 20.0%
!!! CTGTTAATTGAGTATTTTTT+GGG + chr4_1:79034423-79034442 Msa0575230:five_prime_UTR 20.0%
!!! TTCTCAAATTAATGTTTCTA+TGG + chr4_1:79034634-79034653 Msa0575230:CDS 20.0%
!!! GTGATTAATGACTTTTTAAT+TGG + chr4_1:79035747-79035766 Msa0575230:intron 20.0%
!!! ATTAATGACTTTTTAATTGG+AGG + chr4_1:79035750-79035769 Msa0575230:intron 20.0%
!! TTTGTGATTCTTCTATTAAT+CGG + chr4_1:79036144-79036163 Msa0575230:CDS 20.0%
!!! TTAATCGGTTACATTTTATA+TGG + chr4_1:79036159-79036178 Msa0575230:CDS 20.0%
!! ATTATTAATGAGAAAGTGAA+AGG - chr4_1:79036493-79036512 None:intergenic 20.0%
!! TTAGTAATGCAAATAACTTT+AGG - chr4_1:79037039-79037058 None:intergenic 20.0%
!!! ATTTTTAGTGAACTAATGTT+AGG + chr4_1:79037906-79037925 Msa0575230:intron 20.0%
!! TTCTCAACAAAAATAATATC+AGG - chr4_1:79038143-79038162 None:intergenic 20.0%
!!! TGATATTATTTTTGTTGAGA+AGG + chr4_1:79038142-79038161 Msa0575230:CDS 20.0%
!! GTAAGAAAGCACATATAAAA+AGG + chr4_1:79033646-79033665 Msa0575230:five_prime_UTR 25.0%
! AATGAGTAAGTAAGTAAAGA+GGG - chr4_1:79033812-79033831 None:intergenic 25.0%
! TCTTTACTTACTTACTCATT+GGG + chr4_1:79033812-79033831 Msa0575230:five_prime_UTR 25.0%
!!! GTGTATGTGTTTTATTTTTG+AGG + chr4_1:79033890-79033909 Msa0575230:intron 25.0%
!!! TTATTTTTGAGGTCAATGTT+TGG + chr4_1:79033901-79033920 Msa0575230:intron 25.0%
!!! ATAAAAGTGTCTGAGATTTT+AGG + chr4_1:79034337-79034356 Msa0575230:intron 25.0%
! TTCAAAGTTACAAGAACAAA+CGG + chr4_1:79034569-79034588 Msa0575230:CDS 25.0%
!! AATAATGGAAAGTTGAAACA+AGG - chr4_1:79034821-79034840 None:intergenic 25.0%
! AATCATCAAATAATCATCAG+AGG - chr4_1:79034952-79034971 None:intergenic 25.0%
! AAAAAAAAAAAAACAAGCGG+TGG - chr4_1:79035244-79035263 None:intergenic 25.0%
! TGTTTCATATGAGTAATTAG+AGG + chr4_1:79035540-79035559 Msa0575230:intron 25.0%
!! TTATGATCAAACTTTTGTAC+AGG + chr4_1:79036067-79036086 Msa0575230:intron 25.0%
! ATAGAAGAATCACAAAGAAT+AGG - chr4_1:79036140-79036159 None:intergenic 25.0%
!!! GAAAGCATATGTTACATTTT+AGG - chr4_1:79036467-79036486 None:intergenic 25.0%
! TTAGATCATCAAATAAAGAG+AGG - chr4_1:79036851-79036870 None:intergenic 25.0%
! TAAAGTTCCAGATATTGTTA+TGG + chr4_1:79036930-79036949 Msa0575230:CDS 25.0%
! AAAGTTCCAGATATTGTTAT+GGG + chr4_1:79036931-79036950 Msa0575230:CDS 25.0%
! CAAATTGTAACAAATCTTGT+TGG + chr4_1:79036973-79036992 Msa0575230:CDS 25.0%
! TACTAATATGCATGTTATGT+TGG + chr4_1:79037053-79037072 Msa0575230:intron 25.0%
! TTGTTCATAAAATTCATTCG+AGG - chr4_1:79037397-79037416 None:intergenic 25.0%
! GTCAAATAAACTTTATAAGC+CGG + chr4_1:79037583-79037602 Msa0575230:CDS 25.0%
! GCAATGCATTAATTACAAAA+AGG - chr4_1:79037885-79037904 None:intergenic 25.0%
! TGAGTTAAAATATTTGGTTG+TGG + chr4_1:79038104-79038123 Msa0575230:intron 25.0%
! TATCATTGAATTTATCAGCA+AGG - chr4_1:79038764-79038783 None:intergenic 25.0%
! ACACATAACATGTATAGATA+AGG - chr4_1:79038927-79038946 None:intergenic 25.0%
!! CATGTACTAACATTATTTTC+AGG + chr4_1:79038993-79039012 Msa0575230:intron 25.0%
! TGAATTCCATTTACCTATAT+TGG + chr4_1:79039096-79039115 Msa0575230:CDS 25.0%
! AGAGAGTAACAATATATATG+AGG + chr4_1:79039320-79039339 Msa0575230:three_prime_UTR 25.0%
! TGAGATGCATAAGAAAAATA+TGG - chr4_1:79039512-79039531 None:intergenic 25.0%
! AAAGAAAAACCCTTCTAATA+GGG - chr4_1:79039545-79039564 None:intergenic 25.0%
! AACTAAGAAAATCTTATACG+AGG - chr4_1:79039593-79039612 None:intergenic 25.0%
!! AATTTAGAATGTGATTGATG+TGG + chr4_1:79039652-79039671 Msa0575230:three_prime_UTR 25.0%
!! ATTTAGAATGTGATTGATGT+GGG + chr4_1:79039653-79039672 Msa0575230:three_prime_UTR 25.0%
ATTGTATCCTATTCCTATAC+AGG + chr4_1:79033765-79033784 Msa0575230:five_prime_UTR 30.0%
ATGTTTACCTGTATAGGAAT+AGG - chr4_1:79033775-79033794 None:intergenic 30.0%
GAAACAATGTTTACCTGTAT+AGG - chr4_1:79033781-79033800 None:intergenic 30.0%
CAATGAGTAAGTAAGTAAAG+AGG - chr4_1:79033813-79033832 None:intergenic 30.0%
CTCTTTACTTACTTACTCAT+TGG + chr4_1:79033811-79033830 Msa0575230:five_prime_UTR 30.0%
! TTTGATTCTTGTTTCCTAAG+AGG + chr4_1:79034231-79034250 Msa0575230:intron 30.0%
TCAAAGTTACAAGAACAAAC+GGG + chr4_1:79034570-79034589 Msa0575230:CDS 30.0%
! AAAACTTTCAAGTACAAACC+TGG - chr4_1:79034866-79034885 None:intergenic 30.0%
!! AAGTTTTGATCATTCTGTGT+TGG + chr4_1:79034879-79034898 Msa0575230:intron 30.0%
AATCATCAGAGGATACATAA+AGG - chr4_1:79034941-79034960 None:intergenic 30.0%
! TTATTTGATGATTTCCCTTC+AGG + chr4_1:79034959-79034978 Msa0575230:intron 30.0%
! GGAAACTTTTGCAGAATATA+CGG + chr4_1:79034980-79034999 Msa0575230:intron 30.0%
TATAAAGACAATGGAAAGAG+AGG + chr4_1:79035103-79035122 Msa0575230:CDS 30.0%
!! ATTTCTCATTTTTGCAATGC+AGG + chr4_1:79035293-79035312 Msa0575230:intron 30.0%
AGCTGACAATTAGTGAAATA+AGG - chr4_1:79035494-79035513 None:intergenic 30.0%
TATGAGTAATTAGAGGATGA+AGG + chr4_1:79035547-79035566 Msa0575230:intron 30.0%
!! AGAAAACTGTTTCTGTTACA+AGG + chr4_1:79035680-79035699 Msa0575230:intron 30.0%
TCACTTGTGGAAAATTTACT+TGG + chr4_1:79035804-79035823 Msa0575230:CDS 30.0%
CAAAATCAAGCTTACTTTCA+TGG - chr4_1:79035941-79035960 None:intergenic 30.0%
! CATGAAAGTAAGCTTGATTT+TGG + chr4_1:79035939-79035958 Msa0575230:CDS 30.0%
ATCATTTGATGTTTCCTGTA+TGG - chr4_1:79035969-79035988 None:intergenic 30.0%
GGAAACATCAAATGATATGT+AGG + chr4_1:79035973-79035992 Msa0575230:CDS 30.0%
ACATCAAATGATATGTAGGT+AGG + chr4_1:79035977-79035996 Msa0575230:intron 30.0%
GTTCCAGAAAATGTAATGTA+CGG - chr4_1:79036015-79036034 None:intergenic 30.0%
! GTTACATTTTATATGGTGCT+GGG + chr4_1:79036166-79036185 Msa0575230:CDS 30.0%
GAATCATATTGTCAAAGTAG+AGG + chr4_1:79036188-79036207 Msa0575230:CDS 30.0%
AGTTATTGTTGCGTAATCAA+AGG - chr4_1:79036326-79036345 None:intergenic 30.0%
GAAATTAGAACACCTATGAA+TGG + chr4_1:79036396-79036415 Msa0575230:CDS 30.0%
TTACCTAAAATGCCATTCAT+AGG - chr4_1:79036411-79036430 None:intergenic 30.0%
!! ATTTTAGGAAAAGAGAGAGA+GGG - chr4_1:79036452-79036471 None:intergenic 30.0%
ACAAAACTCTGTATGATTGT+AGG + chr4_1:79036524-79036543 Msa0575230:intron 30.0%
! TTCATTTTACCTTTCTTAGC+TGG + chr4_1:79036891-79036910 Msa0575230:intron 30.0%
TATAATCTCAAAACGCTAAG+TGG + chr4_1:79037276-79037295 Msa0575230:CDS 30.0%
AAAACTCTTCATCAGCAATT+AGG - chr4_1:79037347-79037366 None:intergenic 30.0%
CTTAAATATTCCAAAATCCG+CGG - chr4_1:79037637-79037656 None:intergenic 30.0%
TAAGAAGAATCCAATAACTG+AGG + chr4_1:79037653-79037672 Msa0575230:CDS 30.0%
TTAAAATATTTGGTTGTGGC+AGG + chr4_1:79038108-79038127 Msa0575230:intron 30.0%
CAACAAAAATAATATCAGGC+TGG - chr4_1:79038139-79038158 None:intergenic 30.0%
! TTTTTGTTGAGAAGGATTCA+TGG + chr4_1:79038150-79038169 Msa0575230:CDS 30.0%
! TTTTGTTGAGAAGGATTCAT+GGG + chr4_1:79038151-79038170 Msa0575230:CDS 30.0%
! AAATTTTCTTTCCGAACAGA+AGG - chr4_1:79038445-79038464 None:intergenic 30.0%
! GTTCGGAAAGAAAATTTTAG+TGG + chr4_1:79038448-79038467 Msa0575230:CDS 30.0%
!!! ATTTTAGTGGTTGATGACAA+TGG + chr4_1:79038461-79038480 Msa0575230:CDS 30.0%
!! TATGAAGAGTGTTTGAAATG+TGG + chr4_1:79039148-79039167 Msa0575230:CDS 30.0%
!! ATGAAGAGTGTTTGAAATGT+GGG + chr4_1:79039149-79039168 Msa0575230:CDS 30.0%
! TTATGTCTCAAAACCTTTTG+AGG + chr4_1:79039180-79039199 Msa0575230:CDS 30.0%
TAAAGATTCTCTTCCTCAAA+AGG - chr4_1:79039196-79039215 None:intergenic 30.0%
TGTCATGAATCTACTGAAAT+AGG - chr4_1:79039250-79039269 None:intergenic 30.0%
TAACAAGCTCAAAGTTTGAT+TGG + chr4_1:79039380-79039399 Msa0575230:three_prime_UTR 30.0%
ATACTTACTTCCCTATTAGA+AGG + chr4_1:79039532-79039551 Msa0575230:three_prime_UTR 30.0%
TACTTACTTCCCTATTAGAA+GGG + chr4_1:79039533-79039552 Msa0575230:three_prime_UTR 30.0%
GAAAGAAAAACCCTTCTAAT+AGG - chr4_1:79039546-79039565 None:intergenic 30.0%
ATATGTTCCCAAGAAAATGT+TGG + chr4_1:79039624-79039643 Msa0575230:three_prime_UTR 30.0%
! TTAAGCACCAACATTTTCTT+GGG - chr4_1:79039634-79039653 None:intergenic 30.0%
! ATTAAGCACCAACATTTTCT+TGG - chr4_1:79039635-79039654 None:intergenic 30.0%
CAGTAATAAAGATTTGAGCT+TGG + chr4_1:79039727-79039746 Msa0575230:three_prime_UTR 30.0%
!! TAAGTCTTATTCCACTAAGT+GGG + chr4_1:79039773-79039792 Msa0575230:three_prime_UTR 30.0%
! TAATATTGGCTGTTGAGAGA+AGG + chr4_1:79034033-79034052 Msa0575230:five_prime_UTR 35.0%
! AATATTGGCTGTTGAGAGAA+GGG + chr4_1:79034034-79034053 Msa0575230:five_prime_UTR 35.0%
! TCTCAGACACTTTTATCTGA+TGG - chr4_1:79034333-79034352 None:intergenic 35.0%
TGAACTCCTCTTCATATCTA+TGG - chr4_1:79034453-79034472 None:intergenic 35.0%
GAAGAGGAGTTCAAAGAAAT+AGG + chr4_1:79034460-79034479 Msa0575230:five_prime_UTR 35.0%
GAAAGAGATTCAGTGTTAGT+TGG + chr4_1:79034489-79034508 Msa0575230:five_prime_UTR 35.0%
!! AGTGTTAGTTGGTGTTGTAA+TGG + chr4_1:79034500-79034519 Msa0575230:exon 35.0%
!! GTGTTAGTTGGTGTTGTAAT+GGG + chr4_1:79034501-79034520 Msa0575230:exon 35.0%
!! CTTGTAACTTTGAAGCCAAA+GGG - chr4_1:79034563-79034582 None:intergenic 35.0%
!! TCTTGTAACTTTGAAGCCAA+AGG - chr4_1:79034564-79034583 None:intergenic 35.0%
CAAAGTTACAAGAACAAACG+GGG + chr4_1:79034571-79034590 Msa0575230:CDS 35.0%
GTTTCTATGGATTCTTCTGA+TGG + chr4_1:79034647-79034666 Msa0575230:CDS 35.0%
TCGTATCATCTACAGCAAAA+TGG + chr4_1:79034680-79034699 Msa0575230:CDS 35.0%
TACTAAAGTGAGAAGGAAAG+AGG + chr4_1:79034710-79034729 Msa0575230:CDS 35.0%
ATGGAAAGTTGAAACAAGGA+TGG - chr4_1:79034817-79034836 None:intergenic 35.0%
CAGAAGGGTTTCTGTAATAA+TGG - chr4_1:79034836-79034855 None:intergenic 35.0%
TTCTGCAAAAGTTTCCTGAA+GGG - chr4_1:79034976-79034995 None:intergenic 35.0%
ATTCTGCAAAAGTTTCCTGA+AGG - chr4_1:79034977-79034996 None:intergenic 35.0%
GTTAACAACTCTTTGTGCAT+AGG - chr4_1:79035045-79035064 None:intergenic 35.0%
TGCACAAAGAGTTGTTAACT+CGG + chr4_1:79035046-79035065 Msa0575230:CDS 35.0%
TGGAGTGGTTATAAAGACAA+TGG + chr4_1:79035094-79035113 Msa0575230:CDS 35.0%
! ACATCATATCAATCGACTCA+AGG - chr4_1:79035187-79035206 None:intergenic 35.0%
AAAAAAAACAAGCGGTGGAA+TGG - chr4_1:79035239-79035258 None:intergenic 35.0%
TAATGAGCTCTTCTGTTGTT+GGG - chr4_1:79035452-79035471 None:intergenic 35.0%
TTAATGAGCTCTTCTGTTGT+TGG - chr4_1:79035453-79035472 None:intergenic 35.0%
TGAAATAAGGATATACCCTG+CGG - chr4_1:79035481-79035500 None:intergenic 35.0%
! AACACTAATAGTGGCATTGA+CGG - chr4_1:79035632-79035651 None:intergenic 35.0%
! TGTGTCGATAACACTAATAG+TGG - chr4_1:79035641-79035660 None:intergenic 35.0%
TCTGTTACAAGGCTTGTATT+TGG + chr4_1:79035691-79035710 Msa0575230:intron 35.0%
TTAATTGGAGGCAGATATGT+TGG + chr4_1:79035762-79035781 Msa0575230:intron 35.0%
AATTTACTTGGTCAACTTGC+TGG + chr4_1:79035816-79035835 Msa0575230:CDS 35.0%
TTGGTTGCCATACATGATTA+GGG - chr4_1:79035892-79035911 None:intergenic 35.0%
ATTGGTTGCCATACATGATT+AGG - chr4_1:79035893-79035912 None:intergenic 35.0%
AAACATCACCTTCTTCGTAT+TGG - chr4_1:79035911-79035930 None:intergenic 35.0%
!! TTGATTTTGGAGATCCATAC+AGG + chr4_1:79035952-79035971 Msa0575230:CDS 35.0%
! CTACCGTACATTACATTTTC+TGG + chr4_1:79036009-79036028 Msa0575230:intron 35.0%
!!! CATTTTCTGGAACTGACTTT+CGG + chr4_1:79036022-79036041 Msa0575230:intron 35.0%
! GGTTACATTTTATATGGTGC+TGG + chr4_1:79036165-79036184 Msa0575230:CDS 35.0%
! ACACCTATGAATGGCATTTT+AGG + chr4_1:79036405-79036424 Msa0575230:CDS 35.0%
!! CATTTTAGGAAAAGAGAGAG+AGG - chr4_1:79036453-79036472 None:intergenic 35.0%
TGTATGATTGTAGGAATGCT+TGG + chr4_1:79036533-79036552 Msa0575230:intron 35.0%
! ACTTCTCTGAAAAAAGAGAG+AGG - chr4_1:79036736-79036755 None:intergenic 35.0%
ATATTGTTATGGGAGATCCT+GGG + chr4_1:79036941-79036960 Msa0575230:CDS 35.0%
AAGCTTGAGACTTATCGAAA+TGG + chr4_1:79037219-79037238 Msa0575230:CDS 35.0%
TTGAGACTTATCGAAATGGA+GGG + chr4_1:79037223-79037242 Msa0575230:CDS 35.0%
CGATGCTTCAACTAAAAAAG+TGG + chr4_1:79037371-79037390 Msa0575230:CDS 35.0%
TTATGAACAAGTCACCTTGA+TGG + chr4_1:79037407-79037426 Msa0575230:CDS 35.0%
TGGAATTGGAATTCCTTTCT+CGG + chr4_1:79037446-79037465 Msa0575230:CDS 35.0%
AGGCATGAAAATCCTATCTT+GGG - chr4_1:79037472-79037491 None:intergenic 35.0%
AAGGCATGAAAATCCTATCT+TGG - chr4_1:79037473-79037492 None:intergenic 35.0%
! GATTTTCATGCCTTTTGTTC+AGG + chr4_1:79037479-79037498 Msa0575230:CDS 35.0%
! AGCTCGACTTCTAGAAATTA+TGG + chr4_1:79037507-79037526 Msa0575230:CDS 35.0%
! TCGACTTCTAGAAATTATGG+TGG + chr4_1:79037510-79037529 Msa0575230:CDS 35.0%
TCTAGAAATTATGGTGGTAC+CGG + chr4_1:79037516-79037535 Msa0575230:CDS 35.0%
AAAATCCGCGGTAAATGAAA+AGG - chr4_1:79037625-79037644 None:intergenic 35.0%
! TTTTCATTTACCGCGGATTT+TGG + chr4_1:79037624-79037643 Msa0575230:CDS 35.0%
!!! ATCTACCATCCAGTTTTAGA+GGG + chr4_1:79037697-79037716 Msa0575230:CDS 35.0%
AGATACCATTTGAAGAGACT+TGG + chr4_1:79037768-79037787 Msa0575230:CDS 35.0%
GATACCATTTGAAGAGACTT+GGG + chr4_1:79037769-79037788 Msa0575230:CDS 35.0%
GATTCATGTGTGACTTTAGA+TGG - chr4_1:79037955-79037974 None:intergenic 35.0%
AGTCACACATGAATCATGAT+AGG + chr4_1:79037960-79037979 Msa0575230:intron 35.0%
! TTGCATTTGTTCTTGTTGTG+TGG + chr4_1:79038059-79038078 Msa0575230:intron 35.0%
TGCTAATATTCGTAGCTAGA+AGG - chr4_1:79038259-79038278 None:intergenic 35.0%
TTTGATAAAGCTAAATCCGC+AGG + chr4_1:79038287-79038306 Msa0575230:CDS 35.0%
! TTGATGACAATGGAGTAAAC+CGG + chr4_1:79038471-79038490 Msa0575230:CDS 35.0%
GGATATTCAAATGCCAGAAA+TGG + chr4_1:79038607-79038626 Msa0575230:CDS 35.0%
ATTCAAATGCCAGAAATGGA+CGG + chr4_1:79038611-79038630 Msa0575230:CDS 35.0%
TCATGGCCAATATAGGTAAA+TGG - chr4_1:79039105-79039124 None:intergenic 35.0%
AACACTCTTCATATGTAGCA+TGG - chr4_1:79039141-79039160 None:intergenic 35.0%
!! CTACTGAAATAGGTTTTGTC+TGG - chr4_1:79039240-79039259 None:intergenic 35.0%
TTATAGCATGTTCACACTAC+TGG + chr4_1:79039284-79039303 Msa0575230:three_prime_UTR 35.0%
GAGAATCTATACACAAGCTA+GGG - chr4_1:79039455-79039474 None:intergenic 35.0%
TTGTGTATAGATTCTCCCAA+GGG + chr4_1:79039459-79039478 Msa0575230:three_prime_UTR 35.0%
!! CTAAGTCTTATTCCACTAAG+TGG + chr4_1:79039772-79039791 Msa0575230:three_prime_UTR 35.0%
!! AAGTCTTATTCCACTAAGTG+GGG + chr4_1:79039774-79039793 Msa0575230:three_prime_UTR 35.0%
GTTTGTCTTTGAGCAAAGAC+TGG + chr4_1:79033962-79033981 Msa0575230:intron 40.0%
GACTTCTAATCATGCTCTCT+AGG - chr4_1:79033995-79034014 None:intergenic 40.0%
AGGGAAATAGAGACAAGCAT+GGG - chr4_1:79034106-79034125 None:intergenic 40.0%
AAGGGAAATAGAGACAAGCA+TGG - chr4_1:79034107-79034126 None:intergenic 40.0%
CCAAGCATGATGAATGATTG+AGG - chr4_1:79034197-79034216 None:intergenic 40.0%
CCTCAATCATTCATCATGCT+TGG + chr4_1:79034194-79034213 Msa0575230:intron 40.0%
! TCTTGTTTCCTAAGAGGTCT+TGG + chr4_1:79034237-79034256 Msa0575230:intron 40.0%
TTTCCTAAGAGGTCTTGGTT+TGG + chr4_1:79034242-79034261 Msa0575230:intron 40.0%
AAACCAAACCAAGACCTCTT+AGG - chr4_1:79034248-79034267 None:intergenic 40.0%
!! TAAGAGGTCTTGGTTTGGTT+TGG + chr4_1:79034247-79034266 Msa0575230:intron 40.0%
ACGCAAAACAATGCTGTACT+TGG + chr4_1:79034278-79034297 Msa0575230:intron 40.0%
GGACTTCCATAGATATGAAG+AGG + chr4_1:79034444-79034463 Msa0575230:five_prime_UTR 40.0%
TCATTCAAGCACATAGAGCT+TGG + chr4_1:79034610-79034629 Msa0575230:CDS 40.0%
ATCTACAGCAAAATGGACGT+GGG + chr4_1:79034687-79034706 Msa0575230:CDS 40.0%
! AGTGAGAAGGAAAGAGGTTT+TGG + chr4_1:79034716-79034735 Msa0575230:CDS 40.0%
! GTGAGAAGGAAAGAGGTTTT+GGG + chr4_1:79034717-79034736 Msa0575230:CDS 40.0%
TGGGTAGTCTTTGTGATCAA+AGG + chr4_1:79034736-79034755 Msa0575230:CDS 40.0%
GGGTAGTCTTTGTGATCAAA+GGG + chr4_1:79034737-79034756 Msa0575230:CDS 40.0%
GGTTGACACTAACACTGAAT+TGG - chr4_1:79034779-79034798 None:intergenic 40.0%
TCAAGTACAAACCTGGTCAA+TGG - chr4_1:79034859-79034878 None:intergenic 40.0%
! CTTTTGCAGAATATACGGCT+AGG + chr4_1:79034985-79035004 Msa0575230:CDS 40.0%
GTTTCCTGAGCAAATATGAC+CGG - chr4_1:79035155-79035174 None:intergenic 40.0%
GAGTCGATTGATATGATGTC+TGG + chr4_1:79035188-79035207 Msa0575230:CDS 40.0%
GATTGATATGATGTCTGGAG+AGG + chr4_1:79035193-79035212 Msa0575230:CDS 40.0%
!! TCTCATTTTTGCAATGCAGG+AGG + chr4_1:79035296-79035315 Msa0575230:intron 40.0%
ATAATGAGAGCTAGAGCTAC+TGG + chr4_1:79035330-79035349 Msa0575230:CDS 40.0%
TAATGAGAGCTAGAGCTACT+GGG + chr4_1:79035331-79035350 Msa0575230:CDS 40.0%
!!! ACTAGCCCTTTTAGGTTGTT+GGG + chr4_1:79035366-79035385 Msa0575230:CDS 40.0%
GAGAACCCAACAACCTAAAA+GGG - chr4_1:79035374-79035393 None:intergenic 40.0%
TGAGAACCCAACAACCTAAA+AGG - chr4_1:79035375-79035394 None:intergenic 40.0%
TTGTTGGGTTCTCATCATCT+CGG + chr4_1:79035381-79035400 Msa0575230:CDS 40.0%
GGGAGCTTAGATTTGTAAAC+AGG - chr4_1:79035423-79035442 None:intergenic 40.0%
! TGCTGGTCATCAAGCAATTT+TGG + chr4_1:79035833-79035852 Msa0575230:CDS 40.0%
ACTGATCCCCTAATCATGTA+TGG + chr4_1:79035882-79035901 Msa0575230:CDS 40.0%
TGGTTGCCATACATGATTAG+GGG - chr4_1:79035891-79035910 None:intergenic 40.0%
TATGGCAACCAATACGAAGA+AGG + chr4_1:79035900-79035919 Msa0575230:CDS 40.0%
GATATGTAGGTAGGTTCTTC+TGG + chr4_1:79035986-79036005 Msa0575230:intron 40.0%
TTTGTACAGGTATCACCAGA+AGG + chr4_1:79036080-79036099 Msa0575230:intron 40.0%
!! AAGGAAAAGTACCTGTGACT+TGG - chr4_1:79036268-79036287 None:intergenic 40.0%
AGTATGGAACGAAGGTCAAA+TGG - chr4_1:79036704-79036723 None:intergenic 40.0%
TCAGAGAAGTCTAGACACAA+AGG + chr4_1:79036746-79036765 Msa0575230:CDS 40.0%
GTCTAGACACAAAGGTTTAG+AGG + chr4_1:79036754-79036773 Msa0575230:CDS 40.0%
CGTTGCTAAACCTATTGTGA+AGG + chr4_1:79036788-79036807 Msa0575230:intron 40.0%
!! CTTGTATTGGCCTTCACAAT+AGG - chr4_1:79036801-79036820 None:intergenic 40.0%
GGATCTCCCATAACAATATC+TGG - chr4_1:79036940-79036959 None:intergenic 40.0%
GATATTGTTATGGGAGATCC+TGG + chr4_1:79036940-79036959 Msa0575230:CDS 40.0%
ACAATTTGTCTGAATCTCCC+AGG - chr4_1:79036961-79036980 None:intergenic 40.0%
GGCAACTCTGTTAAAGTAAG+TGG + chr4_1:79036994-79037013 Msa0575230:intron 40.0%
! TCAAGCTTTCCATTTGTTGC+GGG - chr4_1:79037207-79037226 None:intergenic 40.0%
! CTCAAGCTTTCCATTTGTTG+CGG - chr4_1:79037208-79037227 None:intergenic 40.0%
CTTGAGACTTATCGAAATGG+AGG + chr4_1:79037222-79037241 Msa0575230:CDS 40.0%
ACTCTTCATCAGCAATTAGG+TGG - chr4_1:79037344-79037363 None:intergenic 40.0%
ACTGATACTCAAACCAATGC+CGG - chr4_1:79037538-79037557 None:intergenic 40.0%
! AAGCACCTTTTCATTTACCG+CGG + chr4_1:79037617-79037636 Msa0575230:CDS 40.0%
TCCAATAACTGAGGTGAAGA+AGG + chr4_1:79037662-79037681 Msa0575230:CDS 40.0%
ACCTTCTTCACCTCAGTTAT+TGG - chr4_1:79037666-79037685 None:intergenic 40.0%
!! GATCTACCATCCAGTTTTAG+AGG + chr4_1:79037696-79037715 Msa0575230:CDS 40.0%
!! TTAAGCCCTCTAAAACTGGA+TGG - chr4_1:79037705-79037724 None:intergenic 40.0%
TTAAAGCCGTTGTGGTTGAT+GGG + chr4_1:79037721-79037740 Msa0575230:CDS 40.0%
GTATCCCAAGTCTCTTCAAA+TGG - chr4_1:79037776-79037795 None:intergenic 40.0%
AGTCGCAAATGCCATCAATA+AGG + chr4_1:79037803-79037822 Msa0575230:CDS 40.0%
!! CAAGGAAACAGCCTTATTGA+TGG - chr4_1:79037817-79037836 None:intergenic 40.0%
! AATAAGGCTGTTTCCTTGTG+TGG + chr4_1:79037819-79037838 Msa0575230:CDS 40.0%
! ATAAGGCTGTTTCCTTGTGT+GGG + chr4_1:79037820-79037839 Msa0575230:CDS 40.0%
GTTTCCTTGTGTGGGAAAAA+TGG + chr4_1:79037828-79037847 Msa0575230:CDS 40.0%
CTTAAAAACTTACCCTGTGC+TGG - chr4_1:79037859-79037878 None:intergenic 40.0%
GTAGCTAGAAGGATCATTTG+AGG - chr4_1:79038248-79038267 None:intergenic 40.0%
!! ATCCGCAGGTTTTAGTGATA+CGG + chr4_1:79038301-79038320 Msa0575230:CDS 40.0%
CGAACTGAAGTTGAACCATT+AGG - chr4_1:79038419-79038438 None:intergenic 40.0%
! ATCCGCTCCAAAGTTTTTCA+AGG - chr4_1:79038513-79038532 None:intergenic 40.0%
AGCAAGCATCAAACTTGTGA+GGG - chr4_1:79038583-79038602 None:intergenic 40.0%
AAGCAAGCATCAAACTTGTG+AGG - chr4_1:79038584-79038603 None:intergenic 40.0%
CAAGTTTGATGCTTGCTTCA+TGG + chr4_1:79038586-79038605 Msa0575230:CDS 40.0%
TTCAAATGCCAGAAATGGAC+GGG + chr4_1:79038612-79038631 Msa0575230:CDS 40.0%
! AATGCACGTAACTTGCATGT+TGG + chr4_1:79038797-79038816 Msa0575230:intron 40.0%
! ATGGATTACATCTGCTGTCA+TGG - chr4_1:79039122-79039141 None:intergenic 40.0%
! AGAGTGTTTGAAATGTGGGA+TGG + chr4_1:79039153-79039172 Msa0575230:CDS 40.0%
! TGTTTGAAATGTGGGATGGA+TGG + chr4_1:79039157-79039176 Msa0575230:CDS 40.0%
TAGGGATGATGAGTTATGAG+GGG - chr4_1:79039437-79039456 None:intergenic 40.0%
CTAGGGATGATGAGTTATGA+GGG - chr4_1:79039438-79039457 None:intergenic 40.0%
GGAGAATCTATACACAAGCT+AGG - chr4_1:79039456-79039475 None:intergenic 40.0%
CTTGTGTATAGATTCTCCCA+AGG + chr4_1:79039458-79039477 Msa0575230:three_prime_UTR 40.0%
TATAGATTCTCCCAAGGGAA+AGG + chr4_1:79039464-79039483 Msa0575230:three_prime_UTR 40.0%
ATAGATTCTCCCAAGGGAAA+GGG + chr4_1:79039465-79039484 Msa0575230:three_prime_UTR 40.0%
! TTTTCACATCCCTTTCCCTT+GGG - chr4_1:79039477-79039496 None:intergenic 40.0%
! TTTTTCACATCCCTTTCCCT+TGG - chr4_1:79039478-79039497 None:intergenic 40.0%
! TTGAGACCAGATTGGTTGGT+TGG - chr4_1:79033737-79033756 None:intergenic 45.0%
ACAGTTGAGACCAGATTGGT+TGG - chr4_1:79033741-79033760 None:intergenic 45.0%
GAACACAGTTGAGACCAGAT+TGG - chr4_1:79033745-79033764 None:intergenic 45.0%
CAAGCATGGGTCTCAAAAGA+TGG - chr4_1:79034093-79034112 None:intergenic 45.0%
!! GTAACTTTGAAGCCAAAGGG+TGG - chr4_1:79034560-79034579 None:intergenic 45.0%
CATCTACAGCAAAATGGACG+TGG + chr4_1:79034686-79034705 Msa0575230:CDS 45.0%
ACGTGGGTACTAAAGTGAGA+AGG + chr4_1:79034703-79034722 Msa0575230:CDS 45.0%
AAACCTGGTCAATGGCAGAA+GGG - chr4_1:79034851-79034870 None:intergenic 45.0%
AATGGAAAGAGAGGCTTCAC+CGG + chr4_1:79035112-79035131 Msa0575230:CDS 45.0%
!! CTGTTCTGACTAGCCCTTTT+AGG + chr4_1:79035358-79035377 Msa0575230:CDS 45.0%
!!! GACTAGCCCTTTTAGGTTGT+TGG + chr4_1:79035365-79035384 Msa0575230:CDS 45.0%
! CTTCTGTTGTTGGGTTGTGA+GGG - chr4_1:79035443-79035462 None:intergenic 45.0%
! TCTTCTGTTGTTGGGTTGTG+AGG - chr4_1:79035444-79035463 None:intergenic 45.0%
ATTGGAGGCAGATATGTTGG+AGG + chr4_1:79035765-79035784 Msa0575230:intron 45.0%
TGTTGGAGGATCCTTTGATG+TGG + chr4_1:79035779-79035798 Msa0575230:CDS 45.0%
CACAAGTGACTCCACATCAA+AGG - chr4_1:79035793-79035812 None:intergenic 45.0%
CTTTGATGTGGAGTCACTTG+TGG + chr4_1:79035791-79035810 Msa0575230:CDS 45.0%
!! GTAGAAAGTGCTGTCCAGTT+TGG - chr4_1:79036111-79036130 None:intergenic 45.0%
GGATGATTTCCACGAAATGC+AGG + chr4_1:79036209-79036228 Msa0575230:CDS 45.0%
!!! CTTTTAGCTCCTGCATTTCG+TGG - chr4_1:79036221-79036240 None:intergenic 45.0%
! TACCTGTGACTTGGCAACAT+CGG - chr4_1:79036259-79036278 None:intergenic 45.0%
! ACTTTTCCTTGACGTGTCGT+TGG + chr4_1:79036278-79036297 Msa0575230:intron 45.0%
AGTCTGAGCATAGTCACGTT+GGG - chr4_1:79036588-79036607 None:intergenic 45.0%
! TGCCAGCTTCAATTTTCGCT+CGG - chr4_1:79036661-79036680 None:intergenic 45.0%
TGAAGCTGGCAAATTAGAGC+TGG + chr4_1:79036670-79036689 Msa0575230:CDS 45.0%
TGGCAAATTAGAGCTGGAAG+CGG + chr4_1:79036676-79036695 Msa0575230:CDS 45.0%
CATCATCGAGTATGGAACGA+AGG - chr4_1:79036712-79036731 None:intergenic 45.0%
AGAGAGGACATCATCGAGTA+TGG - chr4_1:79036720-79036739 None:intergenic 45.0%
! TGTTGCGGGCTTTCTGTTTT+CGG - chr4_1:79037193-79037212 None:intergenic 45.0%
AACAGAAAGCCCGCAACAAA+TGG + chr4_1:79037195-79037214 Msa0575230:CDS 45.0%
GAAGTTGTGCATGCATCTAG+CGG + chr4_1:79037252-79037271 Msa0575230:CDS 45.0%
TGCTGATGAACGCAACAACT+GGG + chr4_1:79037308-79037327 Msa0575230:CDS 45.0%
TGTGTCGAAGACACTGGAAT+TGG + chr4_1:79037432-79037451 Msa0575230:CDS 45.0%
GAGCTATCTGCCTGAACAAA+AGG - chr4_1:79037492-79037511 None:intergenic 45.0%
!! AATTATGGTGGTACCGGCAT+TGG + chr4_1:79037522-79037541 Msa0575230:CDS 45.0%
!! GGCTTTAAGCCCTCTAAAAC+TGG - chr4_1:79037709-79037728 None:intergenic 45.0%
CTTAAAGCCGTTGTGGTTGA+TGG + chr4_1:79037720-79037739 Msa0575230:CDS 45.0%
AGGTTTCCCATCAACCACAA+CGG - chr4_1:79037730-79037749 None:intergenic 45.0%
!! AGCACCATTTTTCCCACACA+AGG - chr4_1:79037835-79037854 None:intergenic 45.0%
AAAAATGGTGCTTCCAGCAC+AGG + chr4_1:79037843-79037862 Msa0575230:CDS 45.0%
AAAATGGTGCTTCCAGCACA+GGG + chr4_1:79037844-79037863 Msa0575230:CDS 45.0%
GAGAAGGATTCATGGGTTTG+TGG + chr4_1:79038158-79038177 Msa0575230:CDS 45.0%
CATTCTGTTTCCAGTCCAGT+TGG - chr4_1:79038208-79038227 None:intergenic 45.0%
! CAACTGGACTGGAAACAGAA+TGG + chr4_1:79038206-79038225 Msa0575230:CDS 45.0%
CACCGTATCACTAAAACCTG+CGG - chr4_1:79038306-79038325 None:intergenic 45.0%
! AGCTTGCCTTCAGCAAGTTT+TGG + chr4_1:79038358-79038377 Msa0575230:CDS 45.0%
! GCTTGCCTTCAGCAAGTTTT+GGG + chr4_1:79038359-79038378 Msa0575230:CDS 45.0%
!! CTGTTCCCAAAACTTGCTGA+AGG - chr4_1:79038367-79038386 None:intergenic 45.0%
!!! CTTCAGCAAGTTTTGGGAAC+AGG + chr4_1:79038365-79038384 Msa0575230:CDS 45.0%
TCAGTTCGAAGCCTTCTGTT+CGG + chr4_1:79038431-79038450 Msa0575230:CDS 45.0%
ATGACAATGGAGTAAACCGG+AGG + chr4_1:79038474-79038493 Msa0575230:CDS 45.0%
TGACAATGGAGTAAACCGGA+GGG + chr4_1:79038475-79038494 Msa0575230:CDS 45.0%
! CGCCTTGAAAAACTTTGGAG+CGG + chr4_1:79038508-79038527 Msa0575230:CDS 45.0%
CAAACATACCCGTCCATTTC+TGG - chr4_1:79038623-79038642 None:intergenic 45.0%
TTGAAGCAACCCGTCGAATT+CGG + chr4_1:79039017-79039036 Msa0575230:CDS 45.0%
CGAATGGTGAATGTGGTGAA+AGG + chr4_1:79039068-79039087 Msa0575230:CDS 45.0%
TCTGCTGTCATGGCCAATAT+AGG - chr4_1:79039112-79039131 None:intergenic 45.0%
GCTAGGGATGATGAGTTATG+AGG - chr4_1:79039439-79039458 None:intergenic 45.0%
CTTATTCCACTAAGTGGGGT+CGG + chr4_1:79039778-79039797 Msa0575230:three_prime_UTR 45.0%
GACGAACCAACCAACCAATC+TGG + chr4_1:79033728-79033747 Msa0575230:five_prime_UTR 50.0%
!! GAAGGGAGAAGGTGCTTCTT+TGG + chr4_1:79034051-79034070 Msa0575230:five_prime_UTR 50.0%
! GGATGGCAAGAGCATGAACA+TGG - chr4_1:79034800-79034819 None:intergenic 50.0%
AAACCCTTCTGCCATTGACC+AGG + chr4_1:79034845-79034864 Msa0575230:CDS 50.0%
CAAACCTGGTCAATGGCAGA+AGG - chr4_1:79034852-79034871 None:intergenic 50.0%
AAGTAGCGGCCTTTCGAAAG+CGG - chr4_1:79035012-79035031 None:intergenic 50.0%
TTCGAAAGGCCGCTACTTAG+TGG + chr4_1:79035014-79035033 Msa0575230:CDS 50.0%
TAGGCCACTCCACTAAGTAG+CGG - chr4_1:79035026-79035045 None:intergenic 50.0%
GAGCAGTTTGAGAAGCAGCA+TGG + chr4_1:79035074-79035093 Msa0575230:CDS 50.0%
GTTTGAGAAGCAGCATGGAG+TGG + chr4_1:79035079-79035098 Msa0575230:CDS 50.0%
! AAAGAGAGGCTTCACCGGTT+AGG + chr4_1:79035117-79035136 Msa0575230:CDS 50.0%
! AAGAGAGGCTTCACCGGTTA+GGG + chr4_1:79035118-79035137 Msa0575230:CDS 50.0%
GGTGCATACTCATCCCTAAC+CGG - chr4_1:79035134-79035153 None:intergenic 50.0%
GGTTAGGGATGAGTATGCAC+CGG + chr4_1:79035133-79035152 Msa0575230:CDS 50.0%
! TGCACCGGTCATATTTGCTC+AGG + chr4_1:79035148-79035167 Msa0575230:CDS 50.0%
AGCTCATTAAAGCGACCGCA+GGG + chr4_1:79035463-79035482 Msa0575230:CDS 50.0%
!! GAAAGTGCTGTCCAGTTTGG+CGG - chr4_1:79036108-79036127 None:intergenic 50.0%
GGAGCTAAAAGTTCGAGCAG+AGG + chr4_1:79036230-79036249 Msa0575230:CDS 50.0%
GAGAGGGAGAGAGAGAATCT+TGG - chr4_1:79036436-79036455 None:intergenic 50.0%
CAGTCTGAGCATAGTCACGT+TGG - chr4_1:79036589-79036608 None:intergenic 50.0%
GACTGCTCAAGCATGTGGTA+AGG + chr4_1:79036604-79036623 Msa0575230:CDS 50.0%
GACCGAGCGAAAATTGAAGC+TGG + chr4_1:79036656-79036675 Msa0575230:CDS 50.0%
CGAACACTGCCAGCTAAGAA+AGG - chr4_1:79036903-79036922 None:intergenic 50.0%
ATACTGCAGTTCACTGAGCG+AGG + chr4_1:79037141-79037160 Msa0575230:intron 50.0%
CTGCTGATGAACGCAACAAC+TGG + chr4_1:79037307-79037326 Msa0575230:CDS 50.0%
GTCTTCGACACAGACCATCA+AGG - chr4_1:79037424-79037443 None:intergenic 50.0%
ATGGTCTGTGTCGAAGACAC+TGG + chr4_1:79037426-79037445 Msa0575230:CDS 50.0%
TTCCTTTCTCGGCCCAAGAT+AGG + chr4_1:79037457-79037476 Msa0575230:CDS 50.0%
ATCCTATCTTGGGCCGAGAA+AGG - chr4_1:79037462-79037481 None:intergenic 50.0%
AAACTTTATAAGCCGGCCGC+AGG + chr4_1:79037590-79037609 Msa0575230:CDS 50.0%
!! GAAAAGGTGCTTCCAACCTG+CGG - chr4_1:79037609-79037628 None:intergenic 50.0%
TAGAGGGCTTAAAGCCGTTG+TGG + chr4_1:79037713-79037732 Msa0575230:CDS 50.0%
! CTAGTCACAGCAGCTCTAAC+AGG - chr4_1:79037750-79037769 None:intergenic 50.0%
GGATTCATGGGTTTGTGGAG+AGG + chr4_1:79038163-79038182 Msa0575230:CDS 50.0%
TCATGGGTTTGTGGAGAGGA+CGG + chr4_1:79038167-79038186 Msa0575230:CDS 50.0%
GAAGCCACTGAGAGCTAGTA+TGG + chr4_1:79038331-79038350 Msa0575230:CDS 50.0%
CCACTGAGAGCTAGTATGGT+GGG + chr4_1:79038335-79038354 Msa0575230:CDS 50.0%
AACAGGCAAGAAGAGACAGC+TGG + chr4_1:79038382-79038401 Msa0575230:CDS 50.0%
ACAGGCAAGAAGAGACAGCT+GGG + chr4_1:79038383-79038402 Msa0575230:CDS 50.0%
CTGGGAAAAGAGACGCCTAA+TGG + chr4_1:79038401-79038420 Msa0575230:CDS 50.0%
GCAGGCGCCTTGAAAAACTT+TGG + chr4_1:79038503-79038522 Msa0575230:CDS 50.0%
! GATGTGAAGTGTGCCGATAG+CGG + chr4_1:79038530-79038549 Msa0575230:CDS 50.0%
AAGAGCAGCTTTGCCGCTAT+CGG - chr4_1:79038546-79038565 None:intergenic 50.0%
TGAAGCAACCCGTCGAATTC+GGG + chr4_1:79039018-79039037 Msa0575230:CDS 50.0%
TCTCCATCTCCCGAATTCGA+CGG - chr4_1:79039030-79039049 None:intergenic 50.0%
ACAGCGAATGAGGAGACGAA+TGG + chr4_1:79039052-79039071 Msa0575230:CDS 50.0%
GAGGAGACGAATGGTGAATG+TGG + chr4_1:79039061-79039080 Msa0575230:CDS 50.0%
GGCTGTTGAGAGAAGGGAGA+AGG + chr4_1:79034040-79034059 Msa0575230:five_prime_UTR 55.0%
GCAGAATCAGCACCACCCTT+TGG + chr4_1:79034545-79034564 Msa0575230:CDS 55.0%
AAGGCCGCTACTTAGTGGAG+TGG + chr4_1:79035019-79035038 Msa0575230:CDS 55.0%
GGGTTCTCATCATCTCGGTG+TGG + chr4_1:79035386-79035405 Msa0575230:CDS 55.0%
GAGCTCATTAAAGCGACCGC+AGG + chr4_1:79035462-79035481 Msa0575230:CDS 55.0%
AGCCGATGTTGCCAAGTCAC+AGG + chr4_1:79036254-79036273 Msa0575230:CDS 55.0%
CAAGTGCCAACGACACGTCA+AGG - chr4_1:79036287-79036306 None:intergenic 55.0%
! CTTGACGTGTCGTTGGCACT+TGG + chr4_1:79036285-79036304 Msa0575230:intron 55.0%
GCTTGGTCTGCTTCTACGCA+CGG + chr4_1:79036550-79036569 Msa0575230:CDS 55.0%
GCTCAGACTGCTCAAGCATG+TGG + chr4_1:79036599-79036618 Msa0575230:CDS 55.0%
TTTATAAGCCGGCCGCAGGT+TGG + chr4_1:79037594-79037613 Msa0575230:CDS 55.0%
CATGGGTTTGTGGAGAGGAC+GGG + chr4_1:79038168-79038187 Msa0575230:CDS 55.0%
GATCTTCAGTGTGCGCCAAC+TGG + chr4_1:79038190-79038209 Msa0575230:CDS 55.0%
GCCACTGAGAGCTAGTATGG+TGG + chr4_1:79038334-79038353 Msa0575230:CDS 55.0%
! CCCACCATACTAGCTCTCAG+TGG - chr4_1:79038338-79038357 None:intergenic 55.0%
CAATGGAGTAAACCGGAGGG+TGG + chr4_1:79038478-79038497 Msa0575230:CDS 55.0%
AACCCGTCGAATTCGGGAGA+TGG + chr4_1:79039024-79039043 Msa0575230:CDS 55.0%
CTCCATCTCCCGAATTCGAC+GGG - chr4_1:79039029-79039048 None:intergenic 55.0%
GTCGAATTCGGGAGATGGAG+AGG + chr4_1:79039029-79039048 Msa0575230:CDS 55.0%
GATGGAGAGGACAGCGAATG+AGG + chr4_1:79039042-79039061 Msa0575230:CDS 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr4_1:79039787-79039806 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr4_1:79039786-79039805 Msa0575230:three_prime_UTR 55.0%
CGGCTAGGACCGCTTTCGAA+AGG + chr4_1:79035000-79035019 Msa0575230:CDS 60.0%
!! ACCAGAAGGCACCGCCAAAC+TGG + chr4_1:79036094-79036113 Msa0575230:CDS 60.0%
TCCAGTTTGGCGGTGCCTTC+TGG - chr4_1:79036098-79036117 None:intergenic 60.0%
TCAGTGTGCGCCAACTGGAC+TGG + chr4_1:79038195-79038214 Msa0575230:CDS 60.0%
AGGTGCTTCCAACCTGCGGC+CGG - chr4_1:79037605-79037624 None:intergenic 65.0%
GTAAACCGGAGGGTGGCTGC+AGG + chr4_1:79038485-79038504 Msa0575230:CDS 65.0%
AGGCGCCTGCAGCCACCCTC+CGG - chr4_1:79038493-79038512 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 79033575 79039815 79033575 ID=Msa0575230;Name=Msa0575230
chr4_1 mRNA 79033575 79039815 79033575 ID=Msa0575230-mRNA-1;Parent=Msa0575230;Name=Msa0575230-mRNA-1;_AED=0.11;_eAED=0.11;_QI=543|1|1|1|0.83|0.76|13|548|1003
chr4_1 exon 79033575 79033839 79033575 ID=Msa0575230-mRNA-1:exon:28126;Parent=Msa0575230-mRNA-1
chr4_1 exon 79033963 79034096 79033963 ID=Msa0575230-mRNA-1:exon:28127;Parent=Msa0575230-mRNA-1
chr4_1 exon 79034375 79034866 79034375 ID=Msa0575230-mRNA-1:exon:28128;Parent=Msa0575230-mRNA-1
chr4_1 exon 79034981 79035214 79034981 ID=Msa0575230-mRNA-1:exon:28129;Parent=Msa0575230-mRNA-1
chr4_1 exon 79035315 79035484 79035315 ID=Msa0575230-mRNA-1:exon:28130;Parent=Msa0575230-mRNA-1
chr4_1 exon 79035776 79035994 79035776 ID=Msa0575230-mRNA-1:exon:28131;Parent=Msa0575230-mRNA-1
chr4_1 exon 79036089 79036275 79036089 ID=Msa0575230-mRNA-1:exon:28132;Parent=Msa0575230-mRNA-1
chr4_1 exon 79036375 79036426 79036375 ID=Msa0575230-mRNA-1:exon:28133;Parent=Msa0575230-mRNA-1
chr4_1 exon 79036546 79036775 79036546 ID=Msa0575230-mRNA-1:exon:28134;Parent=Msa0575230-mRNA-1
chr4_1 exon 79036910 79037008 79036910 ID=Msa0575230-mRNA-1:exon:28135;Parent=Msa0575230-mRNA-1
chr4_1 exon 79037150 79037865 79037150 ID=Msa0575230-mRNA-1:exon:28136;Parent=Msa0575230-mRNA-1
chr4_1 exon 79038130 79038633 79038130 ID=Msa0575230-mRNA-1:exon:28137;Parent=Msa0575230-mRNA-1
chr4_1 exon 79039015 79039815 79039015 ID=Msa0575230-mRNA-1:exon:28138;Parent=Msa0575230-mRNA-1
chr4_1 five_prime_UTR 79033575 79033839 79033575 ID=Msa0575230-mRNA-1:five_prime_utr;Parent=Msa0575230-mRNA-1
chr4_1 five_prime_UTR 79033963 79034096 79033963 ID=Msa0575230-mRNA-1:five_prime_utr;Parent=Msa0575230-mRNA-1
chr4_1 five_prime_UTR 79034375 79034518 79034375 ID=Msa0575230-mRNA-1:five_prime_utr;Parent=Msa0575230-mRNA-1
chr4_1 CDS 79034519 79034866 79034519 ID=Msa0575230-mRNA-1:cds;Parent=Msa0575230-mRNA-1
chr4_1 CDS 79034981 79035214 79034981 ID=Msa0575230-mRNA-1:cds;Parent=Msa0575230-mRNA-1
chr4_1 CDS 79035315 79035484 79035315 ID=Msa0575230-mRNA-1:cds;Parent=Msa0575230-mRNA-1
chr4_1 CDS 79035776 79035994 79035776 ID=Msa0575230-mRNA-1:cds;Parent=Msa0575230-mRNA-1
chr4_1 CDS 79036089 79036275 79036089 ID=Msa0575230-mRNA-1:cds;Parent=Msa0575230-mRNA-1
chr4_1 CDS 79036375 79036426 79036375 ID=Msa0575230-mRNA-1:cds;Parent=Msa0575230-mRNA-1
chr4_1 CDS 79036546 79036775 79036546 ID=Msa0575230-mRNA-1:cds;Parent=Msa0575230-mRNA-1
chr4_1 CDS 79036910 79037008 79036910 ID=Msa0575230-mRNA-1:cds;Parent=Msa0575230-mRNA-1
chr4_1 CDS 79037150 79037865 79037150 ID=Msa0575230-mRNA-1:cds;Parent=Msa0575230-mRNA-1
chr4_1 CDS 79038130 79038633 79038130 ID=Msa0575230-mRNA-1:cds;Parent=Msa0575230-mRNA-1
chr4_1 CDS 79039015 79039267 79039015 ID=Msa0575230-mRNA-1:cds;Parent=Msa0575230-mRNA-1
chr4_1 three_prime_UTR 79039268 79039815 79039268 ID=Msa0575230-mRNA-1:three_prime_utr;Parent=Msa0575230-mRNA-1
Gene Sequence

>Msa0575230

ATGGGTCTTCTCTTGAAGATGAAGATGCAGAATCAGCACCACCCTTTGGCTTCAAAGTTACAAGAACAAACGGGGAACAAAAGATACACATTCATTCAAGCACATAGAGCTTGGCTTCTCAAATTAATGTTTCTATGGATTCTTCTGATGGCTCTGATTAGTCGTATCATCTACAGCAAAATGGACGTGGGTACTAAAGTGAGAAGGAAAGAGGTTTTGGGTAGTCTTTGTGATCAAAGGGCTAGAATGTTGCAAGACCAATTCAGTGTTAGTGTCAACCATGTTCATGCTCTTGCCATCCTTGTTTCAACTTTCCATTATTACAGAAACCCTTCTGCCATTGACCAGGAAACTTTTGCAGAATATACGGCTAGGACCGCTTTCGAAAGGCCGCTACTTAGTGGAGTGGCCTATGCACAAAGAGTTGTTAACTCGGAAAGAGAGCAGTTTGAGAAGCAGCATGGAGTGGTTATAAAGACAATGGAAAGAGAGGCTTCACCGGTTAGGGATGAGTATGCACCGGTCATATTTGCTCAGGAAACTGTCTCTTACCTTGAGTCGATTGATATGATGTCTGGAGAGGAGGATCGAGAGAACATAATGAGAGCTAGAGCTACTGGGAAAGCTGTTCTGACTAGCCCTTTTAGGTTGTTGGGTTCTCATCATCTCGGTGTGGTTTTAACATTTCCTGTTTACAAATCTAAGCTCCCTCACAACCCAACAACAGAAGAGCTCATTAAAGCGACCGCAGGATATGTTGGAGGATCCTTTGATGTGGAGTCACTTGTGGAAAATTTACTTGGTCAACTTGCTGGTCATCAAGCAATTTTGGTCAATGTATATGATGTCACGAACTCTACTGATCCCCTAATCATGTATGGCAACCAATACGAAGAAGGTGATGTTTCTCTTGTCCATGAAAGTAAGCTTGATTTTGGAGATCCATACAGGAAACATCAAATGATATGTAGGTATCACCAGAAGGCACCGCCAAACTGGACAGCACTTTCTACTGCAGTCCTATTCTTTGTGATTCTTCTATTAATCGGTTACATTTTATATGGTGCTGGGAATCATATTGTCAAAGTAGAGGATGATTTCCACGAAATGCAGGAGCTAAAAGTTCGAGCAGAGGCAGCCGATGTTGCCAAGTCACAGTTTCTAGCTACTGTCTCTCATGAAATTAGAACACCTATGAATGGCATTTTAGGAATGCTTGGTCTGCTTCTACGCACGGAATTGAACTCAACCCAACGTGACTATGCTCAGACTGCTCAAGCATGTGGTAAGGCTCTGATAGCATTAATAAATGAAGTGCTTGACCGAGCGAAAATTGAAGCTGGCAAATTAGAGCTGGAAGCGGTTCCATTTGACCTTCGTTCCATACTCGATGATGTCCTCTCTCTTTTTTCAGAGAAGTCTAGACACAAAGGTTTAGAGCTGGCAGTGTTCGTTTCTGATAAAGTTCCAGATATTGTTATGGGAGATCCTGGGAGATTCAGACAAATTGTAACAAATCTTGTTGGCAACTCTGTTAAATTCACTGAGCGAGGCCATATATTTGTTAAAGTTCATTTATCCGAAAACAGAAAGCCCGCAACAAATGGAAAGCTTGAGACTTATCGAAATGGAGGGTCTGAAGAAGTTGTGCATGCATCTAGCGGTTATAATCTCAAAACGCTAAGTGGATATGAAGCTGCTGATGAACGCAACAACTGGGATAATTTTAACCACCTAATTGCTGATGAAGAGTTTTTCTGCGATGCTTCAACTAAAAAAGTGGCCTCGAATGAATTTTATGAACAAGTCACCTTGATGGTCTGTGTCGAAGACACTGGAATTGGAATTCCTTTCTCGGCCCAAGATAGGATTTTCATGCCTTTTGTTCAGGCAGATAGCTCGACTTCTAGAAATTATGGTGGTACCGGCATTGGTTTGAGTATCAGTAAGTGCCTAGTTGAACTAATGGGTGGTCAAATAAACTTTATAAGCCGGCCGCAGGTTGGAAGCACCTTTTCATTTACCGCGGATTTTGGAATATTTAAGAAGAATCCAATAACTGAGGTGAAGAAGGTTAACTATGAAGATCTACCATCCAGTTTTAGAGGGCTTAAAGCCGTTGTGGTTGATGGGAAACCTGTTAGAGCTGCTGTGACTAGATACCATTTGAAGAGACTTGGGATACAAGCTAAAGTCGCAAATGCCATCAATAAGGCTGTTTCCTTGTGTGGGAAAAATGGTGCTTCCAGCACAGGGTTATTCCAGCCTGATATTATTTTTGTTGAGAAGGATTCATGGGTTTGTGGAGAGGACGGGATCTTCAGTGTGCGCCAACTGGACTGGAAACAGAATGGACATATATTTAAGATGCCTCAAATGATCCTTCTAGCTACGAATATTAGCAATGACGAATTTGATAAAGCTAAATCCGCAGGTTTTAGTGATACGGTGATCATGAAGCCACTGAGAGCTAGTATGGTGGGAGCTTGCCTTCAGCAAGTTTTGGGAACAGGCAAGAAGAGACAGCTGGGAAAAGAGACGCCTAATGGTTCAACTTCAGTTCGAAGCCTTCTGTTCGGAAAGAAAATTTTAGTGGTTGATGACAATGGAGTAAACCGGAGGGTGGCTGCAGGCGCCTTGAAAAACTTTGGAGCGGATGTGAAGTGTGCCGATAGCGGCAAAGCTGCTCTTGAAATGCTTCAATTCCCTCACAAGTTTGATGCTTGCTTCATGGATATTCAAATGCCAGAAATGGACGGGTTTGAAGCAACCCGTCGAATTCGGGAGATGGAGAGGACAGCGAATGAGGAGACGAATGGTGAATGTGGTGAAAGGAAAAGTGAATTCCATTTACCTATATTGGCCATGACAGCAGATGTAATCCATGCTACATATGAAGAGTGTTTGAAATGTGGGATGGATGGTTATGTCTCAAAACCTTTTGAGGAAGAGAATCTTTATCAAGCAGTTGCAAAGTTTTTCCAGACAAAACCTATTTCAGTAGATTCATGA
Protein sequence

>Msa0575230

MGLLLKMKMQNQHHPLASKLQEQTGNKRYTFIQAHRAWLLKLMFLWILLMALISRIIYSKMDVGTKVRRKEVLGSLCDQRARMLQDQFSVSVNHVHALAILVSTFHYYRNPSAIDQETFAEYTARTAFERPLLSGVAYAQRVVNSEREQFEKQHGVVIKTMEREASPVRDEYAPVIFAQETVSYLESIDMMSGEEDRENIMRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLPHNPTTEELIKATAGYVGGSFDVESLVENLLGQLAGHQAILVNVYDVTNSTDPLIMYGNQYEEGDVSLVHESKLDFGDPYRKHQMICRYHQKAPPNWTALSTAVLFFVILLLIGYILYGAGNHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLGLLLRTELNSTQRDYAQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDKVPDIVMGDPGRFRQIVTNLVGNSVKFTERGHIFVKVHLSENRKPATNGKLETYRNGGSEEVVHASSGYNLKTLSGYEAADERNNWDNFNHLIADEEFFCDASTKKVASNEFYEQVTLMVCVEDTGIGIPFSAQDRIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGQINFISRPQVGSTFSFTADFGIFKKNPITEVKKVNYEDLPSSFRGLKAVVVDGKPVRAAVTRYHLKRLGIQAKVANAINKAVSLCGKNGASSTGLFQPDIIFVEKDSWVCGEDGIFSVRQLDWKQNGHIFKMPQMILLATNISNDEFDKAKSAGFSDTVIMKPLRASMVGACLQQVLGTGKKRQLGKETPNGSTSVRSLLFGKKILVVDDNGVNRRVAAGALKNFGADVKCADSGKAALEMLQFPHKFDACFMDIQMPEMDGFEATRRIREMERTANEETNGECGERKSEFHLPILAMTADVIHATYEECLKCGMDGYVSKPFEEENLYQAVAKFFQTKPISVDS*