Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0930450 | XP_003631014.2 | 98.704 | 1003 | 13 | 0 | 1 | 1003 | 1 | 1003 | 0.0 | 2064 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0930450 | sp|Q9C5U0|AHK4_ARATH | 71.183 | 989 | 255 | 12 | 25 | 1003 | 112 | 1080 | 0.0 | 1402 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|---|---|
Msa0930450 | TR | Others |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0681260 | Msa0930450 | 0.819241 | 1.287543e-52 | -8.615850e-47 |
Msa0681280 | Msa0930450 | 0.818058 | 2.389949e-52 | -8.615850e-47 |
Msa0575230 | Msa0930450 | 0.863634 | 2.164870e-64 | -8.615850e-47 |
Msa0930450 | Msa1354000 | 0.959880 | 6.236136e-118 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0930450 | MtrunA17_Chr8g0392301 | 98.704 | 1003 | 13 | 0 | 1 | 1003 | 1 | 1003 | 0.0 | 2064 |
Msa0930450 | MtrunA17_Chr5g0447641 | 53.571 | 980 | 399 | 14 | 41 | 994 | 263 | 1212 | 0.0 | 995 |
Msa0930450 | MtrunA17_Chr8g0377481 | 52.261 | 995 | 398 | 17 | 29 | 994 | 21 | 967 | 0.0 | 988 |
Msa0930450 | MtrunA17_Chr3g0122391 | 51.908 | 996 | 413 | 16 | 25 | 996 | 73 | 1026 | 0.0 | 979 |
Msa0930450 | MtrunA17_Chr2g0311191 | 74.444 | 180 | 7 | 1 | 320 | 499 | 94 | 234 | 1.03e-80 | 262 |
Msa0930450 | MtrunA17_Chr2g0311191 | 80.882 | 68 | 13 | 0 | 184 | 251 | 21 | 88 | 5.38e-30 | 119 |
Msa0930450 | MtrunA17_Chr3g0136601 | 36.364 | 297 | 170 | 8 | 386 | 680 | 373 | 652 | 5.30e-41 | 163 |
Msa0930450 | MtrunA17_Chr3g0136601 | 31.677 | 161 | 97 | 3 | 847 | 995 | 790 | 949 | 8.95e-18 | 89.0 |
Msa0930450 | MtrunA17_Chr1g0150511 | 34.494 | 316 | 179 | 8 | 386 | 680 | 379 | 687 | 5.34e-41 | 164 |
Msa0930450 | MtrunA17_Chr1g0150511 | 33.566 | 143 | 83 | 3 | 863 | 994 | 870 | 1011 | 1.29e-15 | 82.0 |
Msa0930450 | MtrunA17_Chr5g0405701 | 33.036 | 336 | 191 | 7 | 336 | 670 | 462 | 764 | 2.22e-40 | 162 |
Msa0930450 | MtrunA17_Chr5g0405701 | 31.138 | 167 | 74 | 4 | 858 | 998 | 1047 | 1198 | 3.57e-15 | 80.9 |
Msa0930450 | MtrunA17_Chr8g0371601 | 34.416 | 308 | 152 | 5 | 372 | 670 | 460 | 726 | 6.30e-40 | 160 |
Msa0930450 | MtrunA17_Chr8g0371601 | 32.353 | 170 | 73 | 4 | 841 | 982 | 999 | 1154 | 8.17e-17 | 85.9 |
Msa0930450 | MtrunA17_Chr4g0013831 | 29.888 | 358 | 187 | 9 | 377 | 727 | 338 | 638 | 3.91e-30 | 128 |
Msa0930450 | MtrunA17_Chr7g0269631 | 31.148 | 305 | 155 | 4 | 377 | 680 | 338 | 588 | 6.66e-28 | 120 |
Msa0930450 | MtrunA17_Chr1g0197591 | 27.446 | 368 | 220 | 13 | 335 | 688 | 328 | 662 | 5.57e-24 | 109 |
Msa0930450 | MtrunA17_Chr1g0197591 | 38.571 | 140 | 62 | 5 | 858 | 990 | 923 | 1045 | 3.21e-16 | 84.0 |
Msa0930450 | MtrunA17_Chr1g0194741 | 27.628 | 333 | 191 | 10 | 340 | 655 | 352 | 651 | 3.26e-22 | 102 |
Msa0930450 | MtrunA17_Chr1g0190021 | 25.481 | 208 | 152 | 1 | 362 | 569 | 350 | 554 | 3.29e-17 | 87.0 |
Msa0930450 | MtrunA17_Chr1g0194731 | 33.117 | 154 | 78 | 5 | 846 | 991 | 313 | 449 | 4.14e-15 | 79.3 |
Msa0930450 | MtrunA17_Chr7g0274831 | 21.038 | 366 | 232 | 3 | 370 | 735 | 362 | 670 | 1.22e-14 | 78.6 |
Msa0930450 | MtrunA17_Chr7g0274831 | 33.871 | 124 | 62 | 3 | 860 | 980 | 638 | 744 | 1.05e-11 | 69.3 |
Msa0930450 | MtrunA17_Chr8g0343551 | 42.353 | 85 | 32 | 3 | 906 | 990 | 15 | 82 | 3.55e-13 | 66.2 |
Msa0930450 | MtrunA17_Chr8g0364781 | 44.776 | 67 | 37 | 0 | 864 | 930 | 15 | 81 | 4.45e-13 | 67.8 |
Msa0930450 | MtrunA17_Chr1g0186431 | 29.530 | 149 | 105 | 0 | 362 | 510 | 344 | 492 | 8.96e-12 | 69.3 |
Msa0930450 | MtrunA17_Chr1g0186431 | 31.387 | 137 | 74 | 3 | 856 | 991 | 630 | 747 | 1.72e-11 | 68.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0930450 | AT2G01830.2 | 71.183 | 989 | 255 | 12 | 25 | 1003 | 112 | 1080 | 0.0 | 1402 |
Msa0930450 | AT2G01830.1 | 71.183 | 989 | 255 | 12 | 25 | 1003 | 89 | 1057 | 0.0 | 1402 |
Msa0930450 | AT2G01830.4 | 71.183 | 989 | 255 | 12 | 25 | 1003 | 89 | 1057 | 0.0 | 1402 |
Msa0930450 | AT2G01830.6 | 71.183 | 989 | 255 | 12 | 25 | 1003 | 89 | 1057 | 0.0 | 1402 |
Msa0930450 | AT2G01830.3 | 71.183 | 989 | 255 | 12 | 25 | 1003 | 89 | 1057 | 0.0 | 1402 |
Msa0930450 | AT2G01830.5 | 71.183 | 989 | 255 | 12 | 25 | 1003 | 101 | 1069 | 0.0 | 1402 |
Msa0930450 | AT5G35750.1 | 54.328 | 1005 | 393 | 16 | 16 | 995 | 211 | 1174 | 0.0 | 1020 |
Msa0930450 | AT1G27320.1 | 54.088 | 954 | 369 | 15 | 68 | 996 | 121 | 1030 | 0.0 | 981 |
Msa0930450 | AT2G17820.1 | 33.333 | 345 | 178 | 7 | 336 | 670 | 451 | 753 | 4.40e-42 | 168 |
Msa0930450 | AT5G10720.1 | 35.254 | 295 | 142 | 6 | 386 | 680 | 369 | 614 | 8.92e-41 | 163 |
Msa0930450 | AT5G10720.1 | 34.028 | 144 | 83 | 2 | 862 | 994 | 779 | 921 | 3.27e-16 | 84.3 |
Msa0930450 | AT1G66340.1 | 28.112 | 466 | 255 | 11 | 377 | 835 | 337 | 729 | 3.63e-35 | 144 |
Msa0930450 | AT2G47430.1 | 30.723 | 332 | 183 | 11 | 372 | 690 | 384 | 681 | 1.42e-30 | 130 |
Msa0930450 | AT2G47430.1 | 37.063 | 143 | 59 | 5 | 857 | 983 | 982 | 1109 | 1.38e-16 | 85.9 |
Msa0930450 | AT2G40940.1 | 30.952 | 336 | 167 | 7 | 356 | 680 | 306 | 587 | 1.42e-27 | 119 |
Msa0930450 | AT3G04580.2 | 32.026 | 153 | 82 | 5 | 846 | 996 | 631 | 763 | 2.61e-13 | 74.7 |
Msa0930450 | AT3G04580.1 | 32.026 | 153 | 82 | 5 | 846 | 996 | 631 | 763 | 2.61e-13 | 74.7 |
Msa0930450 | AT4G18130.1 | 31.034 | 145 | 98 | 2 | 388 | 531 | 875 | 1018 | 2.43e-11 | 68.6 |
Find 281 sgRNAs with CRISPR-Local
Find 412 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCTTCTTCACCTCAGTTAT+TGG | 0.154797 | 6_2:+79519417 | None:intergenic |
TGAATTCCATTTACCTATAT+TGG | 0.177421 | 6_2:-79517982 | Msa0930450:CDS |
TGTCATGAATCTACTGAAAT+AGG | 0.183473 | 6_2:+79517831 | None:intergenic |
CATGAAAGTAAGCTTGATTT+TGG | 0.185418 | 6_2:-79521194 | Msa0930450:CDS |
TCCAATTTGGCGGTGCCTTC+TGG | 0.187946 | 6_2:+79521038 | None:intergenic |
CAAACATACCCGTCCATTTC+TGG | 0.199510 | 6_2:+79518460 | None:intergenic |
TGCTGGTCATCAAGCAATTT+TGG | 0.203159 | 6_2:-79521300 | Msa0930450:CDS |
GAAGGGAGAAGGTGCTTCTT+TGG | 0.243297 | 6_2:-79523066 | Msa0930450:five_prime_UTR |
AGCTTGCCTTCAGCAAGTTT+TGG | 0.267697 | 6_2:-79518722 | Msa0930450:CDS |
TGAGAACCCAACAACCTAAA+AGG | 0.270552 | 6_2:+79521761 | None:intergenic |
TTCTCAAATTAATGTTTCTA+TGG | 0.271180 | 6_2:-79522500 | Msa0930450:CDS |
TTGAAGCAACTCGTCGAATT+CGG | 0.272691 | 6_2:-79518061 | Msa0930450:CDS |
AGTGAGAAGGAAAGAGGTTT+TGG | 0.273718 | 6_2:-79522418 | Msa0930450:CDS |
TGAACTCCTCTTCATATCTA+TGG | 0.281379 | 6_2:+79522684 | None:intergenic |
CAAAATCAAGCTTACTTTCA+TGG | 0.285290 | 6_2:+79521195 | None:intergenic |
ATTGGTTGCCATACATGATT+AGG | 0.295381 | 6_2:+79521243 | None:intergenic |
ATACTTACTTCCCTATTAGA+AGG | 0.299683 | 6_2:-79517546 | Msa0930450:three_prime_UTR |
GTAAGAATGCATATATAAAA+AGG | 0.303800 | 6_2:-79523466 | Msa0930450:five_prime_UTR |
GGCTTTAAGCCCTCTAAAAC+TGG | 0.307736 | 6_2:+79519374 | None:intergenic |
ACCAGAAGGCACCGCCAAAT+TGG | 0.310432 | 6_2:-79521039 | Msa0930450:CDS |
TCATGGCCAATATAGGTAAA+TGG | 0.311222 | 6_2:+79517976 | None:intergenic |
AAAACTCTTCATCAGCAATT+AGG | 0.316824 | 6_2:+79519736 | None:intergenic |
GAAGAGGAGTTCAAAGAAAT+AGG | 0.317611 | 6_2:-79522674 | Msa0930450:five_prime_UTR |
TGAAGCAACTCGTCGAATTC+GGG | 0.321951 | 6_2:-79518060 | Msa0930450:CDS |
GGATCTCCCATAACAATATC+TGG | 0.330567 | 6_2:+79520144 | None:intergenic |
CAGAAGGGTTTCTGTAATAA+TGG | 0.331115 | 6_2:+79522301 | None:intergenic |
TAACAAGCTCAAAGTTTGAT+TGG | 0.336384 | 6_2:-79517698 | Msa0930450:three_prime_UTR |
CTGCTGATGAACGCAACAAC+TGG | 0.339209 | 6_2:-79519773 | Msa0930450:CDS |
AGCTCGACTTCTAGAAATTA+TGG | 0.341838 | 6_2:-79519573 | Msa0930450:CDS |
CTTAAAGCCGTTGTGGTTGA+TGG | 0.345003 | 6_2:-79519360 | Msa0930450:CDS |
AATGAACTTTAACAAATATA+TGG | 0.345150 | 6_2:+79519916 | None:intergenic |
AACCCTCTTACTTGCTCATT+GGG | 0.345422 | 6_2:-79523302 | Msa0930450:five_prime_UTR |
ATCATTTGATGTTTCCTGTA+TGG | 0.346790 | 6_2:+79521167 | None:intergenic |
CAACCCTCTTACTTGCTCAT+TGG | 0.347380 | 6_2:-79523303 | Msa0930450:five_prime_UTR |
GTGTTAGTTGGTGTTGTAAT+GGG | 0.349487 | 6_2:-79522633 | Msa0930450:exon |
TTTGTGATTCTTCTATTAAT+CGG | 0.350778 | 6_2:-79520989 | Msa0930450:CDS |
TTCGAAAGGCCGCTACTTAG+TGG | 0.361977 | 6_2:-79522120 | Msa0930450:CDS |
ATTGTATCCTATTCCTATAC+AGG | 0.362663 | 6_2:-79523344 | Msa0930450:five_prime_UTR |
GGATATTCAAATGCCAGAAA+TGG | 0.363538 | 6_2:-79518473 | Msa0930450:CDS |
AGAGAGGACATCATCGAGTA+TGG | 0.366813 | 6_2:+79520362 | None:intergenic |
TAATGAGCTCTTCTGTTGTT+GGG | 0.368418 | 6_2:+79521684 | None:intergenic |
TTCCTTTCTCGGCCCAAGAT+AGG | 0.368808 | 6_2:-79519623 | Msa0930450:CDS |
TTATGAACAAGTCACCTTGA+TGG | 0.371342 | 6_2:-79519673 | Msa0930450:CDS |
AATTTACTTGGTCAACTTGC+TGG | 0.372381 | 6_2:-79521317 | Msa0930450:CDS |
TCGTATCATCTACAGCAAAA+TGG | 0.372950 | 6_2:-79522454 | Msa0930450:CDS |
TTAATGAGCTCTTCTGTTGT+TGG | 0.375076 | 6_2:+79521683 | None:intergenic |
TAAGTGCCTAGTTGAACTAA+TGG | 0.375538 | 6_2:-79519523 | Msa0930450:CDS |
GTAGAAAGTGCTGTCCAATT+TGG | 0.380449 | 6_2:+79521025 | None:intergenic |
CTAGTCACAGCAGCTCTAAC+AGG | 0.385909 | 6_2:+79519333 | None:intergenic |
AAGGCATGAAAATCCTATCT+TGG | 0.386310 | 6_2:+79519610 | None:intergenic |
TCAAGCTTTCCATTTGTTGC+GGG | 0.386642 | 6_2:+79519876 | None:intergenic |
GGGAGCTTAGATTTGTAAAC+AGG | 0.386741 | 6_2:+79521713 | None:intergenic |
GATCTTCAGTGTGCGCCAAC+TGG | 0.387077 | 6_2:-79518890 | Msa0930450:CDS |
GAAACAATGTTTACCTGTAT+AGG | 0.388064 | 6_2:+79523331 | None:intergenic |
GGTTGACACTAACACTGAAT+TGG | 0.390644 | 6_2:+79522358 | None:intergenic |
TTGGTTGCCATACATGATTA+GGG | 0.392434 | 6_2:+79521244 | None:intergenic |
TCTGCTGTCATGGCCAATAT+AGG | 0.397938 | 6_2:+79517969 | None:intergenic |
AAAGAGAGGCTTCACCGGTT+AGG | 0.399569 | 6_2:-79522017 | Msa0930450:CDS |
AGTCGCAAATGCCATCAATA+AGG | 0.400064 | 6_2:-79519277 | Msa0930450:CDS |
AAACATCACCTTCTTCGTAT+TGG | 0.401351 | 6_2:+79521225 | None:intergenic |
AAAGTTCCAGATATTGTTAT+GGG | 0.403106 | 6_2:-79520150 | Msa0930450:CDS |
GAAGCCACTGAGAGCTAGTA+TGG | 0.403349 | 6_2:-79518749 | Msa0930450:CDS |
AAGAGAGGCTTCACCGGTTA+GGG | 0.409347 | 6_2:-79522016 | Msa0930450:CDS |
TAAAGTTCCAGATATTGTTA+TGG | 0.411623 | 6_2:-79520151 | Msa0930450:CDS |
TAAAGATTCTCTTCCTCAAA+AGG | 0.411974 | 6_2:+79517885 | None:intergenic |
TGGGTAGTCTTTGTGATCAA+AGG | 0.412517 | 6_2:-79522398 | Msa0930450:CDS |
AACAGAAAGCCCGCAACAAA+TGG | 0.414966 | 6_2:-79519885 | Msa0930450:CDS |
GAAAGAGATTCAGTGTTAGT+TGG | 0.415852 | 6_2:-79522645 | Msa0930450:five_prime_UTR |
GTTTCTATGGATTCTTCTGA+TGG | 0.417958 | 6_2:-79522487 | Msa0930450:CDS |
CGAACTGAAGTTGAACCATT+AGG | 0.418453 | 6_2:+79518664 | None:intergenic |
TGTGTCGAAGACACTGGAAT+TGG | 0.420012 | 6_2:-79519648 | Msa0930450:CDS |
CTCAAGCTTTCCATTTGTTG+CGG | 0.424158 | 6_2:+79519875 | None:intergenic |
TCAGTGTGCGCCAACTGGAC+TGG | 0.427277 | 6_2:-79518885 | Msa0930450:CDS |
CAAATTGTAACAAATCTTGT+TGG | 0.428971 | 6_2:-79520108 | Msa0930450:CDS |
ATGTTTACCTGTATAGGAAT+AGG | 0.431158 | 6_2:+79523337 | None:intergenic |
TGGAATTGGAATTCCTTTCT+CGG | 0.432442 | 6_2:-79519634 | Msa0930450:CDS |
TACTAATATTCGTAGCTAGA+AGG | 0.432556 | 6_2:+79518824 | None:intergenic |
AGTGTTAGTTGGTGTTGTAA+TGG | 0.432775 | 6_2:-79522634 | Msa0930450:exon |
GATATTGTTATGGGAGATCC+TGG | 0.437067 | 6_2:-79520141 | Msa0930450:CDS |
GTCTAGACACAAAGGTTTAG+AGG | 0.439244 | 6_2:-79520325 | Msa0930450:intron |
CTTCTGTTGTTGGGTTGTGA+GGG | 0.443892 | 6_2:+79521693 | None:intergenic |
TTACCTAAAATGCCATTCAT+AGG | 0.447126 | 6_2:+79520725 | None:intergenic |
AATTATGGTGGTACCGGCAT+TGG | 0.449454 | 6_2:-79519558 | Msa0930450:CDS |
ATAATGAGAGCTAGAGCTAC+TGG | 0.450935 | 6_2:-79521803 | Msa0930450:CDS |
TTATAGCATGTTCACACTAC+TGG | 0.452704 | 6_2:-79517794 | Msa0930450:three_prime_UTR |
GCAGAATCAGCACCACCCTT+TGG | 0.456173 | 6_2:-79522589 | Msa0930450:CDS |
CATTCTGTTTCCAGTCCAGT+TGG | 0.457489 | 6_2:+79518875 | None:intergenic |
AACCAACCAACCAACCAATC+TGG | 0.462291 | 6_2:-79523381 | Msa0930450:five_prime_UTR |
GGGTAGTCTTTGTGATCAAA+GGG | 0.462700 | 6_2:-79522397 | Msa0930450:CDS |
GCTTGGGATGATGAGTTATG+AGG | 0.462731 | 6_2:+79517642 | None:intergenic |
TCCAATAACTGAGGTGAAGA+AGG | 0.463469 | 6_2:-79519418 | Msa0930450:CDS |
TTCAAAGTTACAAGAGCAAA+CGG | 0.464582 | 6_2:-79522565 | Msa0930450:CDS |
AAGAGCAGCTTTGCCGCTAT+CGG | 0.467101 | 6_2:+79518537 | None:intergenic |
TCTTCTGTTGTTGGGTTGTG+AGG | 0.467157 | 6_2:+79521692 | None:intergenic |
TCAAAGTTACAAGAGCAAAC+GGG | 0.468850 | 6_2:-79522564 | Msa0930450:CDS |
ACTAAGTGGGGTCGGCTACA+TGG | 0.473141 | 6_2:-79517295 | Msa0930450:three_prime_UTR |
AGGCATGAAAATCCTATCTT+GGG | 0.473309 | 6_2:+79519611 | None:intergenic |
ATAGAAGAATCACAAAGAAT+AGG | 0.477698 | 6_2:+79520996 | None:intergenic |
AATAAGGCTGTTTCCTTGTG+TGG | 0.480317 | 6_2:-79519261 | Msa0930450:CDS |
GAACCCAATGAGCAAGTAAG+AGG | 0.481756 | 6_2:+79523299 | None:intergenic |
TCACTTGTGGAAAATTTACT+TGG | 0.482007 | 6_2:-79521329 | Msa0930450:CDS |
AGATACCATTTGAAGAGACT+TGG | 0.482768 | 6_2:-79519312 | Msa0930450:CDS |
GTCAAATAAACTTTATAAGC+CGG | 0.482875 | 6_2:-79519497 | Msa0930450:CDS |
ACTGATCCCCTAATCATGTA+TGG | 0.483235 | 6_2:-79521251 | Msa0930450:CDS |
GAGCTATCTGCCTGAACAAA+AGG | 0.486203 | 6_2:+79519591 | None:intergenic |
CATGGGTTTGTGGAGAGGAC+GGG | 0.486989 | 6_2:-79518912 | Msa0930450:CDS |
TCATGGGTTTGTGGAGAGGA+CGG | 0.487640 | 6_2:-79518913 | Msa0930450:CDS |
GGTGCATACTCATCCCTAAC+CGG | 0.487653 | 6_2:+79522003 | None:intergenic |
AGTATGGAACGAAGGTCAAA+TGG | 0.489767 | 6_2:+79520378 | None:intergenic |
CAAGGAAACAGCCTTATTGA+TGG | 0.489776 | 6_2:+79519266 | None:intergenic |
AAGTGCCTAGTTGAACTAAT+GGG | 0.492093 | 6_2:-79519522 | Msa0930450:CDS |
AGGCGCCTGCAGCCACCCTC+CGG | 0.492109 | 6_2:+79518590 | None:intergenic |
TCAGTTCGAAGCCTTCTGTT+CGG | 0.494919 | 6_2:-79518649 | Msa0930450:CDS |
TCATTCAAGCACATAGAGCT+TGG | 0.496464 | 6_2:-79522524 | Msa0930450:CDS |
GAGAATCTATACACAAGCTT+GGG | 0.497574 | 6_2:+79517626 | None:intergenic |
GAGAACCCAACAACCTAAAA+GGG | 0.497618 | 6_2:+79521762 | None:intergenic |
GACCAGATTGGTTGGTTGGT+TGG | 0.498151 | 6_2:+79523379 | None:intergenic |
ATCCTATCTTGGGCCGAGAA+AGG | 0.498744 | 6_2:+79519621 | None:intergenic |
GTATCCCAAGTCTCTTCAAA+TGG | 0.499078 | 6_2:+79519307 | None:intergenic |
TAAGTCTTATTCTACTAAGT+GGG | 0.500354 | 6_2:-79517308 | Msa0930450:three_prime_UTR |
AAGCTTGAGACTTATCGAAA+TGG | 0.503401 | 6_2:-79519861 | Msa0930450:CDS |
GGAAACATCAAATGATATGT+AGG | 0.503498 | 6_2:-79521160 | Msa0930450:intron |
CTGGGAAAAGAGTCGCCTAA+TGG | 0.504300 | 6_2:-79518679 | Msa0930450:CDS |
AAAATCCGCGGTAAATGAAA+AGG | 0.506447 | 6_2:+79519458 | None:intergenic |
GGATGATTTCCACGAAATGC+AGG | 0.506772 | 6_2:-79520924 | Msa0930450:CDS |
GACTGCTCAGGCATGTGGTA+AGG | 0.508840 | 6_2:-79520475 | Msa0930450:CDS |
GAGTCGATTGATATGATGTC+TGG | 0.510772 | 6_2:-79521946 | Msa0930450:CDS |
GATGGAGAGGACAGCGAATG+AGG | 0.511200 | 6_2:-79518036 | Msa0930450:CDS |
TTAATTGGAGGCAGATATGT+TGG | 0.514349 | 6_2:-79521371 | Msa0930450:intron |
TTTATAAGCCGGCCGCAGGT+TGG | 0.515174 | 6_2:-79519486 | Msa0930450:CDS |
CTTGTAACTTTGAAGCCAAA+GGG | 0.516016 | 6_2:+79522574 | None:intergenic |
GGAGAATCTATACACAAGCT+TGG | 0.516415 | 6_2:+79517625 | None:intergenic |
TGCACCGGTCATATTTGCTC+AGG | 0.519789 | 6_2:-79521986 | Msa0930450:CDS |
TTAAAGCCGTTGTGGTTGAT+GGG | 0.520906 | 6_2:-79519359 | Msa0930450:CDS |
TGAAGCTGGCAAATTAGAGC+TGG | 0.522160 | 6_2:-79520409 | Msa0930450:CDS |
ATGAAGAGTGTTTGAAATGT+GGG | 0.523905 | 6_2:-79517929 | Msa0930450:CDS |
GAAATTAGAACACCTATGAA+TGG | 0.524054 | 6_2:-79520737 | Msa0930450:CDS |
CAAGAATAAAGCTTTGAGCT+TGG | 0.524205 | 6_2:-79517354 | Msa0930450:three_prime_UTR |
TATAATCTCAAAACGCTAAG+TGG | 0.524296 | 6_2:-79519804 | Msa0930450:CDS |
AACAGGCAAGAAGAGACAGC+TGG | 0.524546 | 6_2:-79518698 | Msa0930450:CDS |
TTGTTCATAAAATTCATTCG+AGG | 0.525613 | 6_2:+79519686 | None:intergenic |
AACACTCTTCATATGTAGCA+TGG | 0.525664 | 6_2:+79517940 | None:intergenic |
AATATTGGCTGTTGAGAGAA+GGG | 0.525734 | 6_2:-79523083 | Msa0930450:five_prime_UTR |
CTTTGATGTGGAGTCACTTG+TGG | 0.526300 | 6_2:-79521342 | Msa0930450:CDS |
TGTATGATTGTAGGAATGCT+TGG | 0.526473 | 6_2:-79520546 | Msa0930450:intron |
TAATATTGGCTGTTGAGAGA+AGG | 0.528670 | 6_2:-79523084 | Msa0930450:five_prime_UTR |
CATCTACAGCAAAATGGACG+TGG | 0.529606 | 6_2:-79522448 | Msa0930450:CDS |
TATAGATTCTCCCAAGGGAA+AGG | 0.529959 | 6_2:-79517614 | Msa0930450:three_prime_UTR |
TCTAGAAATTATGGTGGTAC+CGG | 0.530180 | 6_2:-79519564 | Msa0930450:CDS |
ATGGATTACATCTGCTGTCA+TGG | 0.530208 | 6_2:+79517959 | None:intergenic |
TTCAAATGCCAGAAATGGAC+GGG | 0.532095 | 6_2:-79518468 | Msa0930450:intron |
TACTTACTTCCCTATTAGAA+GGG | 0.532863 | 6_2:-79517545 | Msa0930450:three_prime_UTR |
TACTAAAGTGAGAAGGAAAG+AGG | 0.533010 | 6_2:-79522424 | Msa0930450:CDS |
GTAAACCGGAGGGTGGCTGC+AGG | 0.533229 | 6_2:-79518595 | Msa0930450:CDS |
AGAGAGTAACAATATATATG+AGG | 0.533603 | 6_2:-79517758 | Msa0930450:three_prime_UTR |
AATGGAAAGAGAGGCTTCAC+CGG | 0.534549 | 6_2:-79522022 | Msa0930450:CDS |
AAACCCTTCTGCCATTGACC+AGG | 0.535215 | 6_2:-79522289 | Msa0930450:intron |
TCAAGCACAAACCTGGTCAA+TGG | 0.536283 | 6_2:+79522278 | None:intergenic |
AGCCGATGTTGCCAAGTCAC+AGG | 0.537666 | 6_2:-79520879 | Msa0930450:intron |
TCTTGTAACTTTGAAGCCAA+AGG | 0.538214 | 6_2:+79522573 | None:intergenic |
ATGGTCTGTGTCGAAGACAC+TGG | 0.538586 | 6_2:-79519654 | Msa0930450:CDS |
AACTCGTCGAATTCGGGAGA+TGG | 0.539466 | 6_2:-79518054 | Msa0930450:CDS |
ATATGTTCCCAAGAAAATGT+TGG | 0.539697 | 6_2:-79517457 | Msa0930450:three_prime_UTR |
AAACTTTATAAGCCGGCCGC+AGG | 0.541024 | 6_2:-79519490 | Msa0930450:CDS |
TGTTTGAAATGTGGGATGGA+TGG | 0.544805 | 6_2:-79517921 | Msa0930450:CDS |
ACAGTTGAGACCAGATTGGT+TGG | 0.545899 | 6_2:+79523371 | None:intergenic |
TTTGATAAAGCTAAATCCGC+AGG | 0.546457 | 6_2:-79518793 | Msa0930450:CDS |
CTGTTCCCAAAACTTGCTGA+AGG | 0.546763 | 6_2:+79518716 | None:intergenic |
TTGTTGGGTTCTCATCATCT+CGG | 0.549046 | 6_2:-79521752 | Msa0930450:CDS |
GTCGAATTCGGGAGATGGAG+AGG | 0.549539 | 6_2:-79518049 | Msa0930450:CDS |
ATAAGGCTGTTTCCTTGTGT+GGG | 0.549996 | 6_2:-79519260 | Msa0930450:CDS |
GAGCTCATTAAAGCGACCGC+AGG | 0.550704 | 6_2:-79521671 | Msa0930450:CDS |
AAACTAGTACAGAAAGAGAA+AGG | 0.550741 | 6_2:-79523423 | Msa0930450:five_prime_UTR |
TGCTGATGAACGCAACAACT+GGG | 0.552352 | 6_2:-79519772 | Msa0930450:CDS |
GACTTCTAATCATGCTCTCA+AGG | 0.553746 | 6_2:+79523125 | None:intergenic |
ATTTAGAATGTGATTGATGT+GGG | 0.554152 | 6_2:-79517428 | Msa0930450:three_prime_UTR |
TTGAGACCAGATTGGTTGGT+TGG | 0.555936 | 6_2:+79523375 | None:intergenic |
GTTAACAACTCTTTGTGCAT+AGG | 0.556014 | 6_2:+79522092 | None:intergenic |
GACCGAGCGAAAATTGAAGC+TGG | 0.556250 | 6_2:-79520423 | Msa0930450:CDS |
CTAAGTCTTATTCTACTAAG+TGG | 0.556472 | 6_2:-79517309 | Msa0930450:three_prime_UTR |
GAGAAGGATTCATGGGTTTG+TGG | 0.557947 | 6_2:-79518922 | Msa0930450:CDS |
ATTGGAGGCAGATATGTTGG+AGG | 0.558944 | 6_2:-79521368 | Msa0930450:intron |
ATAGATTCTCCCAAGGGAAA+GGG | 0.559943 | 6_2:-79517613 | Msa0930450:three_prime_UTR |
TGACTATGCTCAGACTGCTC+AGG | 0.560313 | 6_2:-79520487 | Msa0930450:CDS |
AGTCTGAGCATAGTCACGTT+GGG | 0.560336 | 6_2:+79520494 | None:intergenic |
GTAGCTAGAAGGATCATTTG+AGG | 0.560581 | 6_2:+79518835 | None:intergenic |
GGATTCATGGGTTTGTGGAG+AGG | 0.561266 | 6_2:-79518917 | Msa0930450:CDS |
AGGTGCTTCCAACCTGCGGC+CGG | 0.562519 | 6_2:+79519478 | None:intergenic |
GATACCATTTGAAGAGACTT+GGG | 0.564437 | 6_2:-79519311 | Msa0930450:CDS |
ACTGATACTCAAACCAATGC+CGG | 0.566091 | 6_2:+79519545 | None:intergenic |
TATGAAGAGTGTTTGAAATG+TGG | 0.566182 | 6_2:-79517930 | Msa0930450:CDS |
GAAAGTGCTGTCCAATTTGG+CGG | 0.567496 | 6_2:+79521028 | None:intergenic |
ACAATTTGTCTGAATCTCCC+AGG | 0.568802 | 6_2:+79520123 | None:intergenic |
GTTTCCTGAGCAAATATGAC+CGG | 0.569475 | 6_2:+79521982 | None:intergenic |
AAGGAAAAGTACCTGTGACT+TGG | 0.570868 | 6_2:+79520868 | None:intergenic |
CACAAGTGACTCCACATCAA+AGG | 0.571996 | 6_2:+79521343 | None:intergenic |
TATAAAGACAATGGAAAGAG+AGG | 0.575171 | 6_2:-79522031 | Msa0930450:CDS |
GTTTGAGAAGCAGCATGGAG+TGG | 0.575227 | 6_2:-79522055 | Msa0930450:CDS |
TAGAGGGCTTAAAGCCGTTG+TGG | 0.575392 | 6_2:-79519367 | Msa0930450:CDS |
CTTGGGATGATGAGTTATGA+GGG | 0.577048 | 6_2:+79517643 | None:intergenic |
GAACACAGTTGAGACCAGAT+TGG | 0.577362 | 6_2:+79523367 | None:intergenic |
CTTGAGACTTATCGAAATGG+AGG | 0.580908 | 6_2:-79519858 | Msa0930450:CDS |
TATGGCAACCAATACGAAGA+AGG | 0.582214 | 6_2:-79521233 | Msa0930450:CDS |
CTTATTCTACTAAGTGGGGT+CGG | 0.583161 | 6_2:-79517303 | Msa0930450:three_prime_UTR |
CCACTGAGAGCTAGTATGGT+GGG | 0.584057 | 6_2:-79518745 | Msa0930450:CDS |
CAAACCTGGTCAATGGCAGA+AGG | 0.584600 | 6_2:+79522285 | None:intergenic |
TACCTGTGACTTGGCAACAT+CGG | 0.584979 | 6_2:+79520877 | None:intergenic |
AATTTAGAATGTGATTGATG+TGG | 0.585743 | 6_2:-79517429 | Msa0930450:three_prime_UTR |
GGACTTCCATAGATATGAAG+AGG | 0.585973 | 6_2:-79522690 | Msa0930450:five_prime_UTR |
CTTAAATATTCCAAAATCCG+CGG | 0.588225 | 6_2:+79519446 | None:intergenic |
GGCTGTTGAGAGAAGGGAGA+AGG | 0.588770 | 6_2:-79523077 | Msa0930450:five_prime_UTR |
GCTTGGTCTGCTTCTACGCA+CGG | 0.590241 | 6_2:-79520529 | Msa0930450:CDS |
ATTCAAATGCCAGAAATGGA+CGG | 0.591431 | 6_2:-79518469 | Msa0930450:CDS |
GTGAAACCAGTCTTTGCTCA+AGG | 0.593589 | 6_2:+79523149 | None:intergenic |
TAATGAGAGCTAGAGCTACT+GGG | 0.593885 | 6_2:-79521802 | Msa0930450:CDS |
TGGAGTGGTTATAAAGACAA+TGG | 0.596726 | 6_2:-79522040 | Msa0930450:CDS |
TTGATGACAATGGAGTAAAC+CGG | 0.599633 | 6_2:-79518609 | Msa0930450:CDS |
ACTCTTCATCAGCAATTAGG+TGG | 0.601724 | 6_2:+79519739 | None:intergenic |
GAGCAGTTTGAGAAGCAGCA+TGG | 0.604333 | 6_2:-79522060 | Msa0930450:CDS |
ATGGAAAGTTGAAACAAGGA+TGG | 0.605809 | 6_2:+79522320 | None:intergenic |
ACAGGCAAGAAGAGACAGCT+GGG | 0.606308 | 6_2:-79518697 | Msa0930450:CDS |
AGCAAGCATCAAAATTGTGA+GGG | 0.607346 | 6_2:+79518500 | None:intergenic |
GAGGAGACGAATGGTGAATG+TGG | 0.607644 | 6_2:-79518017 | Msa0930450:CDS |
GGAGCTAAAAGTTCGAGCAG+AGG | 0.610100 | 6_2:-79520903 | Msa0930450:CDS |
CAACTGGACTGGAAACAGAA+TGG | 0.610211 | 6_2:-79518874 | Msa0930450:CDS |
GGATGGCAAGAGCATGAACA+TGG | 0.613468 | 6_2:+79522337 | None:intergenic |
CAGTCTGAGCATAGTCACGT+TGG | 0.615929 | 6_2:+79520493 | None:intergenic |
AAGTAGCGGCCTTTCGAAAG+CGG | 0.618779 | 6_2:+79522125 | None:intergenic |
TTAAGCCCTCTAAAACTGGA+TGG | 0.620083 | 6_2:+79519378 | None:intergenic |
GATGTGAAGTGTGCCGATAG+CGG | 0.620620 | 6_2:-79518550 | Msa0930450:CDS |
TCAGAGAAGTCTAGACACAA+AGG | 0.620996 | 6_2:-79520333 | Msa0930450:CDS |
AGCTCATTAAAGCGACCGCA+GGG | 0.621429 | 6_2:-79521670 | Msa0930450:intron |
TGGTTGCCATACATGATTAG+GGG | 0.623830 | 6_2:+79521245 | None:intergenic |
CAAAGTTACAAGAGCAAACG+GGG | 0.624122 | 6_2:-79522563 | Msa0930450:CDS |
AGAGTGTTTGAAATGTGGGA+TGG | 0.624246 | 6_2:-79517925 | Msa0930450:CDS |
TGCACAAAGAGTTGTTAACT+CGG | 0.624623 | 6_2:-79522088 | Msa0930450:CDS |
AAGCAAGCATCAAAATTGTG+AGG | 0.627279 | 6_2:+79518499 | None:intergenic |
TGTTGGAGGATCCTTTGATG+TGG | 0.629395 | 6_2:-79521354 | Msa0930450:CDS |
GTCTTCGACACAGACCATCA+AGG | 0.633984 | 6_2:+79519659 | None:intergenic |
TTGAGACTTATCGAAATGGA+GGG | 0.635447 | 6_2:-79519857 | Msa0930450:CDS |
AAACCTGGTCAATGGCAGAA+GGG | 0.635904 | 6_2:+79522286 | None:intergenic |
CGGCTAGGACCGCTTTCGAA+AGG | 0.636060 | 6_2:-79522134 | Msa0930450:CDS |
TTTGTACAGGTATCACCAGA+AGG | 0.636717 | 6_2:-79521053 | Msa0930450:intron |
TTGTGTATAGATTCTCCCAA+GGG | 0.637729 | 6_2:-79517619 | Msa0930450:three_prime_UTR |
TGGCAAATTAGAGCTGGAAG+CGG | 0.637994 | 6_2:-79520403 | Msa0930450:CDS |
CGAATGGTGAATGTGGTGAA+AGG | 0.638437 | 6_2:-79518010 | Msa0930450:CDS |
CTTGTGTATAGATTCTCCCA+AGG | 0.639527 | 6_2:-79517620 | Msa0930450:three_prime_UTR |
GGGTTCTCATCATCTCGGTG+TGG | 0.642737 | 6_2:-79521747 | Msa0930450:CDS |
AAAATGGTGCTTCCAGCACA+GGG | 0.643044 | 6_2:-79519236 | Msa0930450:intron |
GAATCATATTGTCAAAGTAG+AGG | 0.643202 | 6_2:-79520945 | Msa0930450:CDS |
ATACTGCAGTTCACTGAGCG+AGG | 0.645750 | 6_2:-79519939 | Msa0930450:intron |
GACCACCCATTAGTTCAACT+AGG | 0.646099 | 6_2:+79519517 | None:intergenic |
CACTAAGAAAATCTTACACG+AGG | 0.647561 | 6_2:+79517489 | None:intergenic |
AACCCAATGAGCAAGTAAGA+GGG | 0.648969 | 6_2:+79523300 | None:intergenic |
GGTTAGGGATGAGTATGCAC+CGG | 0.649698 | 6_2:-79522001 | Msa0930450:CDS |
GCCACTGAGAGCTAGTATGG+TGG | 0.649946 | 6_2:-79518746 | Msa0930450:CDS |
GTAACTTTGAAGCCAAAGGG+TGG | 0.650789 | 6_2:+79522577 | None:intergenic |
GCTCAGACTGCTCAGGCATG+TGG | 0.653319 | 6_2:-79520480 | Msa0930450:CDS |
ACAGCGAATGAGGAGACGAA+TGG | 0.654884 | 6_2:-79518026 | Msa0930450:CDS |
CACCGTATCACTAAAACCTG+CGG | 0.656600 | 6_2:+79518777 | None:intergenic |
AATAATGGAAAGTTGAAACA+AGG | 0.658333 | 6_2:+79522316 | None:intergenic |
GATTGATATGATGTCTGGAG+AGG | 0.658590 | 6_2:-79521941 | Msa0930450:intron |
AAGTCTTATTCTACTAAGTG+GGG | 0.658883 | 6_2:-79517307 | Msa0930450:three_prime_UTR |
ACATCATATCAATCGACTCA+AGG | 0.660613 | 6_2:+79521950 | None:intergenic |
GAAGTTGTGCATGCATCTAG+CGG | 0.666517 | 6_2:-79519828 | Msa0930450:CDS |
TAAGAAGAATCCAATAACTG+AGG | 0.666691 | 6_2:-79519427 | Msa0930450:CDS |
ATATTGTTATGGGAGATCCT+GGG | 0.667347 | 6_2:-79520140 | Msa0930450:CDS |
CAATGGAGTAAACCGGAGGG+TGG | 0.669359 | 6_2:-79518602 | Msa0930450:CDS |
TTGGGATGATGAGTTATGAG+GGG | 0.672294 | 6_2:+79517644 | None:intergenic |
CATCATCGAGTATGGAACGA+AGG | 0.675752 | 6_2:+79520370 | None:intergenic |
TGCCTAGTTGAACTAATGGG+TGG | 0.680573 | 6_2:-79519519 | Msa0930450:CDS |
AAGGCCGCTACTTAGTGGAG+TGG | 0.681896 | 6_2:-79522115 | Msa0930450:CDS |
GAAAAGGTGCTTCCAACCTG+CGG | 0.683040 | 6_2:+79519474 | None:intergenic |
TCGACTTCTAGAAATTATGG+TGG | 0.683726 | 6_2:-79519570 | Msa0930450:CDS |
ATCTACAGCAAAATGGACGT+GGG | 0.684272 | 6_2:-79522447 | Msa0930450:CDS |
ATGACAATGGAGTAAACCGG+AGG | 0.689272 | 6_2:-79518606 | Msa0930450:CDS |
TGACAATGGAGTAAACCGGA+GGG | 0.689626 | 6_2:-79518605 | Msa0930450:CDS |
ACGTGGGTACTAAAGTGAGA+AGG | 0.690355 | 6_2:-79522431 | Msa0930450:CDS |
AGGTTTCCCATCAACCACAA+CGG | 0.697501 | 6_2:+79519353 | None:intergenic |
CCCACCATACTAGCTCTCAG+TGG | 0.729319 | 6_2:+79518745 | None:intergenic |
TAGGCCACTCCACTAAGTAG+CGG | 0.749192 | 6_2:+79522111 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GAATTTTTAATTCATAATAT+TGG | - | chr6_2:79517727-79517746 | Msa0930450:three_prime_UTR | 10.0% |
!! | TTCATAATAATATCTTAATT+TGG | - | chr6_2:79520568-79520587 | Msa0930450:intron | 10.0% |
!!! | TCGATTATTAAATTTTTTTT+TGG | - | chr6_2:79522394-79522413 | Msa0930450:CDS | 10.0% |
!!! | CAAACTTTTTTATACTATAT+AGG | + | chr6_2:79518090-79518109 | None:intergenic | 15.0% |
!! | AAAAAAAAAAAAAAACCAAG+CGG | + | chr6_2:79518938-79518957 | None:intergenic | 15.0% |
!!! | GGTTTTTTTTTTTTTTTTTG+TGG | - | chr6_2:79518941-79518960 | Msa0930450:CDS | 15.0% |
!! | AAAGGTAAAATGAAAAAAAA+AGG | + | chr6_2:79520629-79520648 | None:intergenic | 15.0% |
!! | AATGAACTTTAACAAATATA+TGG | + | chr6_2:79520912-79520931 | None:intergenic | 15.0% |
!! | ATTAACTGAGTTAAAATATT+TGG | - | chr6_2:79521843-79521862 | Msa0930450:intron | 15.0% |
!! | ATATACAAACAAATATAGTA+TGG | + | chr6_2:79522648-79522667 | None:intergenic | 15.0% |
!! | GTAAGAATGCATATATAAAA+AGG | - | chr6_2:79517359-79517378 | Msa0930450:three_prime_UTR | 20.0% |
!! | AGAGAAAGAATTAAAAAGAA+GGG | + | chr6_2:79517833-79517852 | None:intergenic | 20.0% |
!! | AAGAGAAAGAATTAAAAAGA+AGG | + | chr6_2:79517834-79517853 | None:intergenic | 20.0% |
!!! | ACTGTTAATTGAGTATTTTT+TGG | - | chr6_2:79518113-79518132 | Msa0930450:intron | 20.0% |
!!! | CTGTTAATTGAGTATTTTTT+GGG | - | chr6_2:79518114-79518133 | Msa0930450:intron | 20.0% |
!!! | TTCTCAAATTAATGTTTCTA+TGG | - | chr6_2:79518325-79518344 | Msa0930450:intron | 20.0% |
!!! | GTGATTAATGACTTTTTAAT+TGG | - | chr6_2:79519439-79519458 | Msa0930450:CDS | 20.0% |
!!! | ATTAATGACTTTTTAATTGG+AGG | - | chr6_2:79519442-79519461 | Msa0930450:CDS | 20.0% |
!! | TTTGTGATTCTTCTATTAAT+CGG | - | chr6_2:79519836-79519855 | Msa0930450:CDS | 20.0% |
!!! | TTAATCGGTTACATTTTATA+TGG | - | chr6_2:79519851-79519870 | Msa0930450:CDS | 20.0% |
!! | ATTATTAATGAGAAAGTGAA+AGG | + | chr6_2:79520239-79520258 | None:intergenic | 20.0% |
!! | TATTATTATGAAACTCGTAT+TGG | + | chr6_2:79520560-79520579 | None:intergenic | 20.0% |
!! | TTAGTAATGCAAATAACTTT+AGG | + | chr6_2:79520783-79520802 | None:intergenic | 20.0% |
!!! | ATTTTTAGTGAACTAATGTT+AGG | - | chr6_2:79521651-79521670 | Msa0930450:intron | 20.0% |
!! | TTCTCAACAAAAATAATATC+AGG | + | chr6_2:79521888-79521907 | None:intergenic | 20.0% |
!!! | TGATATTATTTTTGTTGAGA+AGG | - | chr6_2:79521887-79521906 | Msa0930450:intron | 20.0% |
!!! | TTATTTTTGAGGTCAATGTT+TGG | - | chr6_2:79517607-79517626 | Msa0930450:three_prime_UTR | 25.0% |
!!! | ATAAAAGTGTCTGAGATTTT+AGG | - | chr6_2:79518028-79518047 | Msa0930450:CDS | 25.0% |
!! | AATAATGGAAAGTTGAAACA+AGG | + | chr6_2:79518512-79518531 | None:intergenic | 25.0% |
! | AATCATCAAATAATCATCAG+AGG | + | chr6_2:79518643-79518662 | None:intergenic | 25.0% |
! | TGTTTCATATGTGTAATTAG+AGG | - | chr6_2:79519232-79519251 | Msa0930450:intron | 25.0% |
!! | TTATGATCAAACTTTTGTAC+AGG | - | chr6_2:79519759-79519778 | Msa0930450:CDS | 25.0% |
! | ATAGAAGAATCACAAAGAAT+AGG | + | chr6_2:79519832-79519851 | None:intergenic | 25.0% |
!!! | GAAAGCATATGTTACATTTT+AGG | + | chr6_2:79520213-79520232 | None:intergenic | 25.0% |
! | TTAGATCATCAAATAAAGAG+AGG | + | chr6_2:79520597-79520616 | None:intergenic | 25.0% |
! | TAAAGTTCCAGATATTGTTA+TGG | - | chr6_2:79520674-79520693 | Msa0930450:intron | 25.0% |
! | AAAGTTCCAGATATTGTTAT+GGG | - | chr6_2:79520675-79520694 | Msa0930450:intron | 25.0% |
! | CAAATTGTAACAAATCTTGT+TGG | - | chr6_2:79520717-79520736 | Msa0930450:intron | 25.0% |
! | TACTAATATGCATGTTATGT+TGG | - | chr6_2:79520797-79520816 | Msa0930450:intron | 25.0% |
! | TTGTTCATAAAATTCATTCG+AGG | + | chr6_2:79521142-79521161 | None:intergenic | 25.0% |
! | GTCAAATAAACTTTATAAGC+CGG | - | chr6_2:79521328-79521347 | Msa0930450:CDS | 25.0% |
! | GCAATGCATTAATTACAAAA+AGG | + | chr6_2:79521630-79521649 | None:intergenic | 25.0% |
! | TGAGTTAAAATATTTGGTTG+TGG | - | chr6_2:79521849-79521868 | Msa0930450:intron | 25.0% |
! | TATCATTGAATTTATCAGCA+AGG | + | chr6_2:79522511-79522530 | None:intergenic | 25.0% |
! | ACACATAACATGTATAGATA+AGG | + | chr6_2:79522674-79522693 | None:intergenic | 25.0% |
!! | CATGTACTAACATTATTTTC+AGG | - | chr6_2:79522740-79522759 | Msa0930450:five_prime_UTR | 25.0% |
! | TGAATTCCATTTACCTATAT+TGG | - | chr6_2:79522843-79522862 | Msa0930450:intron | 25.0% |
! | AGAGAGTAACAATATATATG+AGG | - | chr6_2:79523067-79523086 | Msa0930450:five_prime_UTR | 25.0% |
! | TGAGATGCATAAGAAAAATA+TGG | + | chr6_2:79523259-79523278 | None:intergenic | 25.0% |
! | AAAGAAAAACCCTTCTAATA+GGG | + | chr6_2:79523292-79523311 | None:intergenic | 25.0% |
!! | AATTTAGAATGTGATTGATG+TGG | - | chr6_2:79523396-79523415 | Msa0930450:five_prime_UTR | 25.0% |
!! | ATTTAGAATGTGATTGATGT+GGG | - | chr6_2:79523397-79523416 | Msa0930450:five_prime_UTR | 25.0% |
!!! | TAAGTCTTATTCTACTAAGT+GGG | - | chr6_2:79523517-79523536 | Msa0930450:five_prime_UTR | 25.0% |
AAACTAGTACAGAAAGAGAA+AGG | - | chr6_2:79517402-79517421 | Msa0930450:three_prime_UTR | 30.0% | |
ATTGTATCCTATTCCTATAC+AGG | - | chr6_2:79517481-79517500 | Msa0930450:three_prime_UTR | 30.0% | |
ATGTTTACCTGTATAGGAAT+AGG | + | chr6_2:79517491-79517510 | None:intergenic | 30.0% | |
GAAACAATGTTTACCTGTAT+AGG | + | chr6_2:79517497-79517516 | None:intergenic | 30.0% | |
!!! | GCTGTGTTTTTTGTTTAGTA+TGG | - | chr6_2:79517566-79517585 | Msa0930450:three_prime_UTR | 30.0% |
!!! | GTGTGTGTGTTTTATTTTTG+AGG | - | chr6_2:79517596-79517615 | Msa0930450:three_prime_UTR | 30.0% |
! | TTTGATTCTTGTTTCCTAAG+AGG | - | chr6_2:79517927-79517946 | Msa0930450:CDS | 30.0% |
TTCAAAGTTACAAGAGCAAA+CGG | - | chr6_2:79518260-79518279 | Msa0930450:intron | 30.0% | |
!! | AAGTTTTGATCATTCTGTGT+TGG | - | chr6_2:79518570-79518589 | Msa0930450:CDS | 30.0% |
AATCATCAGAGGATACATAA+AGG | + | chr6_2:79518632-79518651 | None:intergenic | 30.0% | |
! | TTATTTGATGATTTCCCTTC+AGG | - | chr6_2:79518650-79518669 | Msa0930450:CDS | 30.0% |
! | GGAAACTTTTGCAGAATATA+CGG | - | chr6_2:79518671-79518690 | Msa0930450:CDS | 30.0% |
TATAAAGACAATGGAAAGAG+AGG | - | chr6_2:79518794-79518813 | Msa0930450:CDS | 30.0% | |
AAAAAAAAAAAACCAAGCGG+TGG | + | chr6_2:79518935-79518954 | None:intergenic | 30.0% | |
!! | ATTTCTCATTTTTGCAATGC+AGG | - | chr6_2:79518985-79519004 | Msa0930450:intron | 30.0% |
AGCTGACAATTAGTGAAATA+AGG | + | chr6_2:79519186-79519205 | None:intergenic | 30.0% | |
TATGTGTAATTAGAGGATGA+AGG | - | chr6_2:79519239-79519258 | Msa0930450:CDS | 30.0% | |
!! | AGAAAACTGTTTCTGTTACA+AGG | - | chr6_2:79519372-79519391 | Msa0930450:CDS | 30.0% |
TCACTTGTGGAAAATTTACT+TGG | - | chr6_2:79519496-79519515 | Msa0930450:CDS | 30.0% | |
CAAAATCAAGCTTACTTTCA+TGG | + | chr6_2:79519633-79519652 | None:intergenic | 30.0% | |
! | CATGAAAGTAAGCTTGATTT+TGG | - | chr6_2:79519631-79519650 | Msa0930450:CDS | 30.0% |
ATCATTTGATGTTTCCTGTA+TGG | + | chr6_2:79519661-79519680 | None:intergenic | 30.0% | |
GGAAACATCAAATGATATGT+AGG | - | chr6_2:79519665-79519684 | Msa0930450:CDS | 30.0% | |
ACATCAAATGATATGTAGGT+AGG | - | chr6_2:79519669-79519688 | Msa0930450:CDS | 30.0% | |
! | CTACTGTACATTACATTTTC+TGG | - | chr6_2:79519701-79519720 | Msa0930450:CDS | 30.0% |
! | GTTACATTTTATATGGTGCT+GGG | - | chr6_2:79519858-79519877 | Msa0930450:CDS | 30.0% |
GAATCATATTGTCAAAGTAG+AGG | - | chr6_2:79519880-79519899 | Msa0930450:CDS | 30.0% | |
GAAATTAGAACACCTATGAA+TGG | - | chr6_2:79520088-79520107 | Msa0930450:intron | 30.0% | |
TTACCTAAAATGCCATTCAT+AGG | + | chr6_2:79520103-79520122 | None:intergenic | 30.0% | |
ACAAAACTCTGTATGATTGT+AGG | - | chr6_2:79520270-79520289 | Msa0930450:intron | 30.0% | |
! | TTCATTTTACCTTTCTTAGC+TGG | - | chr6_2:79520635-79520654 | Msa0930450:intron | 30.0% |
TATAATCTCAAAACGCTAAG+TGG | - | chr6_2:79521021-79521040 | Msa0930450:CDS | 30.0% | |
AAAACTCTTCATCAGCAATT+AGG | + | chr6_2:79521092-79521111 | None:intergenic | 30.0% | |
CTTAAATATTCCAAAATCCG+CGG | + | chr6_2:79521382-79521401 | None:intergenic | 30.0% | |
TAAGAAGAATCCAATAACTG+AGG | - | chr6_2:79521398-79521417 | Msa0930450:intron | 30.0% | |
TTAAAATATTTGGTTGTGGC+AGG | - | chr6_2:79521853-79521872 | Msa0930450:intron | 30.0% | |
CAACAAAAATAATATCAGGC+TGG | + | chr6_2:79521884-79521903 | None:intergenic | 30.0% | |
! | TTTTTGTTGAGAAGGATTCA+TGG | - | chr6_2:79521895-79521914 | Msa0930450:intron | 30.0% |
! | TTTTGTTGAGAAGGATTCAT+GGG | - | chr6_2:79521896-79521915 | Msa0930450:intron | 30.0% |
TACTAATATTCGTAGCTAGA+AGG | + | chr6_2:79522004-79522023 | None:intergenic | 30.0% | |
! | AAATTTTCTTTCCGAACAGA+AGG | + | chr6_2:79522190-79522209 | None:intergenic | 30.0% |
! | GTTCGGAAAGAAAATTTTAG+TGG | - | chr6_2:79522193-79522212 | Msa0930450:intron | 30.0% |
!!! | ATTTTAGTGGTTGATGACAA+TGG | - | chr6_2:79522206-79522225 | Msa0930450:intron | 30.0% |
!! | TATGAAGAGTGTTTGAAATG+TGG | - | chr6_2:79522895-79522914 | Msa0930450:intron | 30.0% |
!! | ATGAAGAGTGTTTGAAATGT+GGG | - | chr6_2:79522896-79522915 | Msa0930450:intron | 30.0% |
! | TTATGTCTCAAAACCTTTTG+AGG | - | chr6_2:79522927-79522946 | Msa0930450:intron | 30.0% |
TAAAGATTCTCTTCCTCAAA+AGG | + | chr6_2:79522943-79522962 | None:intergenic | 30.0% | |
TGTCATGAATCTACTGAAAT+AGG | + | chr6_2:79522997-79523016 | None:intergenic | 30.0% | |
TAACAAGCTCAAAGTTTGAT+TGG | - | chr6_2:79523127-79523146 | Msa0930450:five_prime_UTR | 30.0% | |
ATACTTACTTCCCTATTAGA+AGG | - | chr6_2:79523279-79523298 | Msa0930450:intron | 30.0% | |
TACTTACTTCCCTATTAGAA+GGG | - | chr6_2:79523280-79523299 | Msa0930450:intron | 30.0% | |
GAAAGAAAAACCCTTCTAAT+AGG | + | chr6_2:79523293-79523312 | None:intergenic | 30.0% | |
ATATGTTCCCAAGAAAATGT+TGG | - | chr6_2:79523368-79523387 | Msa0930450:five_prime_UTR | 30.0% | |
! | TTAAGCACCAACATTTTCTT+GGG | + | chr6_2:79523378-79523397 | None:intergenic | 30.0% |
! | ATTAAGCACCAACATTTTCT+TGG | + | chr6_2:79523379-79523398 | None:intergenic | 30.0% |
!! | CTAAGTCTTATTCTACTAAG+TGG | - | chr6_2:79523516-79523535 | Msa0930450:five_prime_UTR | 30.0% |
!! | AAGTCTTATTCTACTAAGTG+GGG | - | chr6_2:79523518-79523537 | Msa0930450:five_prime_UTR | 30.0% |
! | TAATATTGGCTGTTGAGAGA+AGG | - | chr6_2:79517741-79517760 | Msa0930450:three_prime_UTR | 35.0% |
! | AATATTGGCTGTTGAGAGAA+GGG | - | chr6_2:79517742-79517761 | Msa0930450:three_prime_UTR | 35.0% |
! | TCTCAGACACTTTTATCTGA+TGG | + | chr6_2:79518024-79518043 | None:intergenic | 35.0% |
TGAACTCCTCTTCATATCTA+TGG | + | chr6_2:79518144-79518163 | None:intergenic | 35.0% | |
GAAGAGGAGTTCAAAGAAAT+AGG | - | chr6_2:79518151-79518170 | Msa0930450:intron | 35.0% | |
GAAAGAGATTCAGTGTTAGT+TGG | - | chr6_2:79518180-79518199 | Msa0930450:intron | 35.0% | |
!! | AGTGTTAGTTGGTGTTGTAA+TGG | - | chr6_2:79518191-79518210 | Msa0930450:intron | 35.0% |
!! | GTGTTAGTTGGTGTTGTAAT+GGG | - | chr6_2:79518192-79518211 | Msa0930450:intron | 35.0% |
!! | CTTGTAACTTTGAAGCCAAA+GGG | + | chr6_2:79518254-79518273 | None:intergenic | 35.0% |
!! | TCTTGTAACTTTGAAGCCAA+AGG | + | chr6_2:79518255-79518274 | None:intergenic | 35.0% |
TCAAAGTTACAAGAGCAAAC+GGG | - | chr6_2:79518261-79518280 | Msa0930450:intron | 35.0% | |
GTTTCTATGGATTCTTCTGA+TGG | - | chr6_2:79518338-79518357 | Msa0930450:intron | 35.0% | |
TCGTATCATCTACAGCAAAA+TGG | - | chr6_2:79518371-79518390 | Msa0930450:intron | 35.0% | |
TACTAAAGTGAGAAGGAAAG+AGG | - | chr6_2:79518401-79518420 | Msa0930450:intron | 35.0% | |
ATGGAAAGTTGAAACAAGGA+TGG | + | chr6_2:79518508-79518527 | None:intergenic | 35.0% | |
CAGAAGGGTTTCTGTAATAA+TGG | + | chr6_2:79518527-79518546 | None:intergenic | 35.0% | |
AAAACTTTCAAGCACAAACC+TGG | + | chr6_2:79518557-79518576 | None:intergenic | 35.0% | |
TTCTGCAAAAGTTTCCTGAA+GGG | + | chr6_2:79518667-79518686 | None:intergenic | 35.0% | |
ATTCTGCAAAAGTTTCCTGA+AGG | + | chr6_2:79518668-79518687 | None:intergenic | 35.0% | |
GTTAACAACTCTTTGTGCAT+AGG | + | chr6_2:79518736-79518755 | None:intergenic | 35.0% | |
TGCACAAAGAGTTGTTAACT+CGG | - | chr6_2:79518737-79518756 | Msa0930450:CDS | 35.0% | |
TGGAGTGGTTATAAAGACAA+TGG | - | chr6_2:79518785-79518804 | Msa0930450:CDS | 35.0% | |
! | ACATCATATCAATCGACTCA+AGG | + | chr6_2:79518878-79518897 | None:intergenic | 35.0% |
TAATGAGCTCTTCTGTTGTT+GGG | + | chr6_2:79519144-79519163 | None:intergenic | 35.0% | |
TTAATGAGCTCTTCTGTTGT+TGG | + | chr6_2:79519145-79519164 | None:intergenic | 35.0% | |
TGAAATAAGGATATACCCTG+CGG | + | chr6_2:79519173-79519192 | None:intergenic | 35.0% | |
! | AACACTAATAGTGGCATTGA+CGG | + | chr6_2:79519324-79519343 | None:intergenic | 35.0% |
! | TGTGTCGATAACACTAATAG+TGG | + | chr6_2:79519333-79519352 | None:intergenic | 35.0% |
TCTGTTACAAGGCTTGTATT+TGG | - | chr6_2:79519383-79519402 | Msa0930450:CDS | 35.0% | |
TTAATTGGAGGCAGATATGT+TGG | - | chr6_2:79519454-79519473 | Msa0930450:CDS | 35.0% | |
AATTTACTTGGTCAACTTGC+TGG | - | chr6_2:79519508-79519527 | Msa0930450:CDS | 35.0% | |
TTGGTTGCCATACATGATTA+GGG | + | chr6_2:79519584-79519603 | None:intergenic | 35.0% | |
ATTGGTTGCCATACATGATT+AGG | + | chr6_2:79519585-79519604 | None:intergenic | 35.0% | |
AAACATCACCTTCTTCGTAT+TGG | + | chr6_2:79519603-79519622 | None:intergenic | 35.0% | |
!! | TTGATTTTGGAGATCCATAC+AGG | - | chr6_2:79519644-79519663 | Msa0930450:CDS | 35.0% |
!!! | CATTTTCTGGAACTGACTTT+TGG | - | chr6_2:79519714-79519733 | Msa0930450:CDS | 35.0% |
! | GGTTACATTTTATATGGTGC+TGG | - | chr6_2:79519857-79519876 | Msa0930450:CDS | 35.0% |
CGTTATTGTTGCGTAATCAA+AGG | + | chr6_2:79520018-79520037 | None:intergenic | 35.0% | |
! | ACACCTATGAATGGCATTTT+AGG | - | chr6_2:79520097-79520116 | Msa0930450:CDS | 35.0% |
TGTATGATTGTAGGAATGCT+TGG | - | chr6_2:79520279-79520298 | Msa0930450:intron | 35.0% | |
! | ACTTCTCTGAAAAAAGAGAG+AGG | + | chr6_2:79520482-79520501 | None:intergenic | 35.0% |
ATATTGTTATGGGAGATCCT+GGG | - | chr6_2:79520685-79520704 | Msa0930450:intron | 35.0% | |
AAGCTTGAGACTTATCGAAA+TGG | - | chr6_2:79520964-79520983 | Msa0930450:CDS | 35.0% | |
TTGAGACTTATCGAAATGGA+GGG | - | chr6_2:79520968-79520987 | Msa0930450:CDS | 35.0% | |
CGATGCTTCAACTAAAAAAG+TGG | - | chr6_2:79521116-79521135 | Msa0930450:intron | 35.0% | |
TTATGAACAAGTCACCTTGA+TGG | - | chr6_2:79521152-79521171 | Msa0930450:intron | 35.0% | |
TGGAATTGGAATTCCTTTCT+CGG | - | chr6_2:79521191-79521210 | Msa0930450:CDS | 35.0% | |
AGGCATGAAAATCCTATCTT+GGG | + | chr6_2:79521217-79521236 | None:intergenic | 35.0% | |
AAGGCATGAAAATCCTATCT+TGG | + | chr6_2:79521218-79521237 | None:intergenic | 35.0% | |
! | GATTTTCATGCCTTTTGTTC+AGG | - | chr6_2:79521224-79521243 | Msa0930450:CDS | 35.0% |
! | AGCTCGACTTCTAGAAATTA+TGG | - | chr6_2:79521252-79521271 | Msa0930450:CDS | 35.0% |
! | TCGACTTCTAGAAATTATGG+TGG | - | chr6_2:79521255-79521274 | Msa0930450:CDS | 35.0% |
TCTAGAAATTATGGTGGTAC+CGG | - | chr6_2:79521261-79521280 | Msa0930450:CDS | 35.0% | |
TAAGTGCCTAGTTGAACTAA+TGG | - | chr6_2:79521302-79521321 | Msa0930450:CDS | 35.0% | |
AAGTGCCTAGTTGAACTAAT+GGG | - | chr6_2:79521303-79521322 | Msa0930450:CDS | 35.0% | |
AAAATCCGCGGTAAATGAAA+AGG | + | chr6_2:79521370-79521389 | None:intergenic | 35.0% | |
! | TTTTCATTTACCGCGGATTT+TGG | - | chr6_2:79521369-79521388 | Msa0930450:intron | 35.0% |
!!! | ATCTACCATCCAGTTTTAGA+GGG | - | chr6_2:79521442-79521461 | Msa0930450:intron | 35.0% |
AGATACCATTTGAAGAGACT+TGG | - | chr6_2:79521513-79521532 | Msa0930450:intron | 35.0% | |
GATACCATTTGAAGAGACTT+GGG | - | chr6_2:79521514-79521533 | Msa0930450:intron | 35.0% | |
GATTCATGTGTGACTTTAGA+TGG | + | chr6_2:79521700-79521719 | None:intergenic | 35.0% | |
AGTCACACATGAATCATGAT+AGG | - | chr6_2:79521705-79521724 | Msa0930450:CDS | 35.0% | |
! | TTGCATTTGTTCTTGTTGTG+TGG | - | chr6_2:79521804-79521823 | Msa0930450:CDS | 35.0% |
TTTGATAAAGCTAAATCCGC+AGG | - | chr6_2:79522032-79522051 | Msa0930450:CDS | 35.0% | |
! | TTGATGACAATGGAGTAAAC+CGG | - | chr6_2:79522216-79522235 | Msa0930450:intron | 35.0% |
AGCAAGCATCAAAATTGTGA+GGG | + | chr6_2:79522328-79522347 | None:intergenic | 35.0% | |
AAGCAAGCATCAAAATTGTG+AGG | + | chr6_2:79522329-79522348 | None:intergenic | 35.0% | |
!! | CAATTTTGATGCTTGCTTCA+TGG | - | chr6_2:79522331-79522350 | Msa0930450:CDS | 35.0% |
GGATATTCAAATGCCAGAAA+TGG | - | chr6_2:79522352-79522371 | Msa0930450:CDS | 35.0% | |
ATTCAAATGCCAGAAATGGA+CGG | - | chr6_2:79522356-79522375 | Msa0930450:CDS | 35.0% | |
TCATGGCCAATATAGGTAAA+TGG | + | chr6_2:79522852-79522871 | None:intergenic | 35.0% | |
AACACTCTTCATATGTAGCA+TGG | + | chr6_2:79522888-79522907 | None:intergenic | 35.0% | |
!! | CTACTGAAATAGGTTTTGTC+TGG | + | chr6_2:79522987-79523006 | None:intergenic | 35.0% |
TTATAGCATGTTCACACTAC+TGG | - | chr6_2:79523031-79523050 | Msa0930450:intron | 35.0% | |
GAGAATCTATACACAAGCTT+GGG | + | chr6_2:79523202-79523221 | None:intergenic | 35.0% | |
TTGTGTATAGATTCTCCCAA+GGG | - | chr6_2:79523206-79523225 | Msa0930450:intron | 35.0% | |
CACTAAGAAAATCTTACACG+AGG | + | chr6_2:79523339-79523358 | None:intergenic | 35.0% | |
!! | CAAGAATAAAGCTTTGAGCT+TGG | - | chr6_2:79523471-79523490 | Msa0930450:five_prime_UTR | 35.0% |
AACCCTCTTACTTGCTCATT+GGG | - | chr6_2:79517523-79517542 | Msa0930450:three_prime_UTR | 40.0% | |
AACCCAATGAGCAAGTAAGA+GGG | + | chr6_2:79517528-79517547 | None:intergenic | 40.0% | |
! | TTTTGTCCTTGAGCAAAGAC+TGG | - | chr6_2:79517670-79517689 | Msa0930450:three_prime_UTR | 40.0% |
GACTTCTAATCATGCTCTCA+AGG | + | chr6_2:79517703-79517722 | None:intergenic | 40.0% | |
AGGGAAATAGAGACAAGCAT+GGG | + | chr6_2:79517814-79517833 | None:intergenic | 40.0% | |
AAGGGAAATAGAGACAAGCA+TGG | + | chr6_2:79517815-79517834 | None:intergenic | 40.0% | |
CCAAGCATGATGAATGATTG+AGG | + | chr6_2:79517893-79517912 | None:intergenic | 40.0% | |
CCTCAATCATTCATCATGCT+TGG | - | chr6_2:79517890-79517909 | Msa0930450:CDS | 40.0% | |
! | TCTTGTTTCCTAAGAGGTCT+TGG | - | chr6_2:79517933-79517952 | Msa0930450:CDS | 40.0% |
TTTCCTAAGAGGTCTTGGTT+TGG | - | chr6_2:79517938-79517957 | Msa0930450:CDS | 40.0% | |
AAACCAAACCAAGACCTCTT+AGG | + | chr6_2:79517944-79517963 | None:intergenic | 40.0% | |
ACGCAAAACAATGCTGTACT+TGG | - | chr6_2:79517969-79517988 | Msa0930450:CDS | 40.0% | |
GGACTTCCATAGATATGAAG+AGG | - | chr6_2:79518135-79518154 | Msa0930450:intron | 40.0% | |
CAAAGTTACAAGAGCAAACG+GGG | - | chr6_2:79518262-79518281 | Msa0930450:intron | 40.0% | |
TCATTCAAGCACATAGAGCT+TGG | - | chr6_2:79518301-79518320 | Msa0930450:intron | 40.0% | |
ATCTACAGCAAAATGGACGT+GGG | - | chr6_2:79518378-79518397 | Msa0930450:intron | 40.0% | |
! | AGTGAGAAGGAAAGAGGTTT+TGG | - | chr6_2:79518407-79518426 | Msa0930450:intron | 40.0% |
! | GTGAGAAGGAAAGAGGTTTT+GGG | - | chr6_2:79518408-79518427 | Msa0930450:intron | 40.0% |
TGGGTAGTCTTTGTGATCAA+AGG | - | chr6_2:79518427-79518446 | Msa0930450:intron | 40.0% | |
GGGTAGTCTTTGTGATCAAA+GGG | - | chr6_2:79518428-79518447 | Msa0930450:intron | 40.0% | |
GGTTGACACTAACACTGAAT+TGG | + | chr6_2:79518470-79518489 | None:intergenic | 40.0% | |
! | CTTTTGCAGAATATACGGCT+AGG | - | chr6_2:79518676-79518695 | Msa0930450:CDS | 40.0% |
GTTTCCTGAGCAAATATGAC+CGG | + | chr6_2:79518846-79518865 | None:intergenic | 40.0% | |
GAGTCGATTGATATGATGTC+TGG | - | chr6_2:79518879-79518898 | Msa0930450:CDS | 40.0% | |
GATTGATATGATGTCTGGAG+AGG | - | chr6_2:79518884-79518903 | Msa0930450:CDS | 40.0% | |
AAAAAAACCAAGCGGTGGAA+TGG | + | chr6_2:79518930-79518949 | None:intergenic | 40.0% | |
!! | TCTCATTTTTGCAATGCAGG+AGG | - | chr6_2:79518988-79519007 | Msa0930450:intron | 40.0% |
ATAATGAGAGCTAGAGCTAC+TGG | - | chr6_2:79519022-79519041 | Msa0930450:intron | 40.0% | |
TAATGAGAGCTAGAGCTACT+GGG | - | chr6_2:79519023-79519042 | Msa0930450:intron | 40.0% | |
!!! | ACTAGCCCTTTTAGGTTGTT+GGG | - | chr6_2:79519058-79519077 | Msa0930450:intron | 40.0% |
GAGAACCCAACAACCTAAAA+GGG | + | chr6_2:79519066-79519085 | None:intergenic | 40.0% | |
TGAGAACCCAACAACCTAAA+AGG | + | chr6_2:79519067-79519086 | None:intergenic | 40.0% | |
TTGTTGGGTTCTCATCATCT+CGG | - | chr6_2:79519073-79519092 | Msa0930450:intron | 40.0% | |
GGGAGCTTAGATTTGTAAAC+AGG | + | chr6_2:79519115-79519134 | None:intergenic | 40.0% | |
! | TGCTGGTCATCAAGCAATTT+TGG | - | chr6_2:79519525-79519544 | Msa0930450:CDS | 40.0% |
ACTGATCCCCTAATCATGTA+TGG | - | chr6_2:79519574-79519593 | Msa0930450:CDS | 40.0% | |
TGGTTGCCATACATGATTAG+GGG | + | chr6_2:79519583-79519602 | None:intergenic | 40.0% | |
TATGGCAACCAATACGAAGA+AGG | - | chr6_2:79519592-79519611 | Msa0930450:CDS | 40.0% | |
GATATGTAGGTAGGTTCTTC+TGG | - | chr6_2:79519678-79519697 | Msa0930450:CDS | 40.0% | |
TTTGTACAGGTATCACCAGA+AGG | - | chr6_2:79519772-79519791 | Msa0930450:CDS | 40.0% | |
!! | GTAGAAAGTGCTGTCCAATT+TGG | + | chr6_2:79519803-79519822 | None:intergenic | 40.0% |
!! | AAGGAAAAGTACCTGTGACT+TGG | + | chr6_2:79519960-79519979 | None:intergenic | 40.0% |
! | ACTTTTCCTTGACATGTCGT+TGG | - | chr6_2:79519970-79519989 | Msa0930450:intron | 40.0% |
AGTATGGAACGAAGGTCAAA+TGG | + | chr6_2:79520450-79520469 | None:intergenic | 40.0% | |
TCAGAGAAGTCTAGACACAA+AGG | - | chr6_2:79520492-79520511 | Msa0930450:CDS | 40.0% | |
GTCTAGACACAAAGGTTTAG+AGG | - | chr6_2:79520500-79520519 | Msa0930450:CDS | 40.0% | |
CGTTGCTAAACCTATTGTGA+AGG | - | chr6_2:79520534-79520553 | Msa0930450:CDS | 40.0% | |
GGATCTCCCATAACAATATC+TGG | + | chr6_2:79520684-79520703 | None:intergenic | 40.0% | |
GATATTGTTATGGGAGATCC+TGG | - | chr6_2:79520684-79520703 | Msa0930450:intron | 40.0% | |
ACAATTTGTCTGAATCTCCC+AGG | + | chr6_2:79520705-79520724 | None:intergenic | 40.0% | |
GGCAACTCTGTTAAAGTAAG+TGG | - | chr6_2:79520738-79520757 | Msa0930450:CDS | 40.0% | |
! | TCAAGCTTTCCATTTGTTGC+GGG | + | chr6_2:79520952-79520971 | None:intergenic | 40.0% |
! | CTCAAGCTTTCCATTTGTTG+CGG | + | chr6_2:79520953-79520972 | None:intergenic | 40.0% |
CTTGAGACTTATCGAAATGG+AGG | - | chr6_2:79520967-79520986 | Msa0930450:CDS | 40.0% | |
ACTCTTCATCAGCAATTAGG+TGG | + | chr6_2:79521089-79521108 | None:intergenic | 40.0% | |
! | AAGCACCTTTTCATTTACCG+CGG | - | chr6_2:79521362-79521381 | Msa0930450:intron | 40.0% |
TCCAATAACTGAGGTGAAGA+AGG | - | chr6_2:79521407-79521426 | Msa0930450:intron | 40.0% | |
ACCTTCTTCACCTCAGTTAT+TGG | + | chr6_2:79521411-79521430 | None:intergenic | 40.0% | |
!! | GATCTACCATCCAGTTTTAG+AGG | - | chr6_2:79521441-79521460 | Msa0930450:intron | 40.0% |
!! | TTAAGCCCTCTAAAACTGGA+TGG | + | chr6_2:79521450-79521469 | None:intergenic | 40.0% |
TTAAAGCCGTTGTGGTTGAT+GGG | - | chr6_2:79521466-79521485 | Msa0930450:intron | 40.0% | |
GTATCCCAAGTCTCTTCAAA+TGG | + | chr6_2:79521521-79521540 | None:intergenic | 40.0% | |
AGTCGCAAATGCCATCAATA+AGG | - | chr6_2:79521548-79521567 | Msa0930450:intron | 40.0% | |
!! | CAAGGAAACAGCCTTATTGA+TGG | + | chr6_2:79521562-79521581 | None:intergenic | 40.0% |
! | AATAAGGCTGTTTCCTTGTG+TGG | - | chr6_2:79521564-79521583 | Msa0930450:intron | 40.0% |
! | ATAAGGCTGTTTCCTTGTGT+GGG | - | chr6_2:79521565-79521584 | Msa0930450:intron | 40.0% |
GTTTCCTTGTGTGGGAAAAA+TGG | - | chr6_2:79521573-79521592 | Msa0930450:intron | 40.0% | |
CTTAAAAACTTACCCTGTGC+TGG | + | chr6_2:79521604-79521623 | None:intergenic | 40.0% | |
GTAGCTAGAAGGATCATTTG+AGG | + | chr6_2:79521993-79522012 | None:intergenic | 40.0% | |
!! | ATCCGCAGGTTTTAGTGATA+CGG | - | chr6_2:79522046-79522065 | Msa0930450:CDS | 40.0% |
CGAACTGAAGTTGAACCATT+AGG | + | chr6_2:79522164-79522183 | None:intergenic | 40.0% | |
! | ATCCGCTCCAAAGTTTTTCA+AGG | + | chr6_2:79522258-79522277 | None:intergenic | 40.0% |
TTCAAATGCCAGAAATGGAC+GGG | - | chr6_2:79522357-79522376 | Msa0930450:CDS | 40.0% | |
! | AATGCACGTAACTTGCATGT+TGG | - | chr6_2:79522544-79522563 | Msa0930450:CDS | 40.0% |
TTGAAGCAACTCGTCGAATT+CGG | - | chr6_2:79522764-79522783 | Msa0930450:intron | 40.0% | |
! | ATGGATTACATCTGCTGTCA+TGG | + | chr6_2:79522869-79522888 | None:intergenic | 40.0% |
! | AGAGTGTTTGAAATGTGGGA+TGG | - | chr6_2:79522900-79522919 | Msa0930450:intron | 40.0% |
! | TGTTTGAAATGTGGGATGGA+TGG | - | chr6_2:79522904-79522923 | Msa0930450:intron | 40.0% |
TTGGGATGATGAGTTATGAG+GGG | + | chr6_2:79523184-79523203 | None:intergenic | 40.0% | |
CTTGGGATGATGAGTTATGA+GGG | + | chr6_2:79523185-79523204 | None:intergenic | 40.0% | |
GGAGAATCTATACACAAGCT+TGG | + | chr6_2:79523203-79523222 | None:intergenic | 40.0% | |
CTTGTGTATAGATTCTCCCA+AGG | - | chr6_2:79523205-79523224 | Msa0930450:intron | 40.0% | |
TATAGATTCTCCCAAGGGAA+AGG | - | chr6_2:79523211-79523230 | Msa0930450:intron | 40.0% | |
ATAGATTCTCCCAAGGGAAA+GGG | - | chr6_2:79523212-79523231 | Msa0930450:intron | 40.0% | |
! | TTTTCACATCCCTTTCCCTT+GGG | + | chr6_2:79523224-79523243 | None:intergenic | 40.0% |
! | TTTTTCACATCCCTTTCCCT+TGG | + | chr6_2:79523225-79523244 | None:intergenic | 40.0% |
CTTATTCTACTAAGTGGGGT+CGG | - | chr6_2:79523522-79523541 | Msa0930450:five_prime_UTR | 40.0% | |
AACCAACCAACCAACCAATC+TGG | - | chr6_2:79517444-79517463 | Msa0930450:three_prime_UTR | 45.0% | |
! | TTGAGACCAGATTGGTTGGT+TGG | + | chr6_2:79517453-79517472 | None:intergenic | 45.0% |
ACAGTTGAGACCAGATTGGT+TGG | + | chr6_2:79517457-79517476 | None:intergenic | 45.0% | |
GAACACAGTTGAGACCAGAT+TGG | + | chr6_2:79517461-79517480 | None:intergenic | 45.0% | |
CAACCCTCTTACTTGCTCAT+TGG | - | chr6_2:79517522-79517541 | Msa0930450:three_prime_UTR | 45.0% | |
GAACCCAATGAGCAAGTAAG+AGG | + | chr6_2:79517529-79517548 | None:intergenic | 45.0% | |
GTGAAACCAGTCTTTGCTCA+AGG | + | chr6_2:79517679-79517698 | None:intergenic | 45.0% | |
CAAGCATGGGTCTCAAAAGA+TGG | + | chr6_2:79517801-79517820 | None:intergenic | 45.0% | |
!! | GTAACTTTGAAGCCAAAGGG+TGG | + | chr6_2:79518251-79518270 | None:intergenic | 45.0% |
CATCTACAGCAAAATGGACG+TGG | - | chr6_2:79518377-79518396 | Msa0930450:intron | 45.0% | |
ACGTGGGTACTAAAGTGAGA+AGG | - | chr6_2:79518394-79518413 | Msa0930450:intron | 45.0% | |
AAACCTGGTCAATGGCAGAA+GGG | + | chr6_2:79518542-79518561 | None:intergenic | 45.0% | |
TCAAGCACAAACCTGGTCAA+TGG | + | chr6_2:79518550-79518569 | None:intergenic | 45.0% | |
AATGGAAAGAGAGGCTTCAC+CGG | - | chr6_2:79518803-79518822 | Msa0930450:CDS | 45.0% | |
!! | CTGTTCTGACTAGCCCTTTT+AGG | - | chr6_2:79519050-79519069 | Msa0930450:intron | 45.0% |
!!! | GACTAGCCCTTTTAGGTTGT+TGG | - | chr6_2:79519057-79519076 | Msa0930450:intron | 45.0% |
! | CTTCTGTTGTTGGGTTGTGA+GGG | + | chr6_2:79519135-79519154 | None:intergenic | 45.0% |
! | TCTTCTGTTGTTGGGTTGTG+AGG | + | chr6_2:79519136-79519155 | None:intergenic | 45.0% |
ATTGGAGGCAGATATGTTGG+AGG | - | chr6_2:79519457-79519476 | Msa0930450:CDS | 45.0% | |
TGTTGGAGGATCCTTTGATG+TGG | - | chr6_2:79519471-79519490 | Msa0930450:CDS | 45.0% | |
CACAAGTGACTCCACATCAA+AGG | + | chr6_2:79519485-79519504 | None:intergenic | 45.0% | |
CTTTGATGTGGAGTCACTTG+TGG | - | chr6_2:79519483-79519502 | Msa0930450:CDS | 45.0% | |
!! | GAAAGTGCTGTCCAATTTGG+CGG | + | chr6_2:79519800-79519819 | None:intergenic | 45.0% |
GGATGATTTCCACGAAATGC+AGG | - | chr6_2:79519901-79519920 | Msa0930450:CDS | 45.0% | |
!!! | CTTTTAGCTCCTGCATTTCG+TGG | + | chr6_2:79519913-79519932 | None:intergenic | 45.0% |
! | TACCTGTGACTTGGCAACAT+CGG | + | chr6_2:79519951-79519970 | None:intergenic | 45.0% |
GAGAGAGAGAGAGAGAATCT+TGG | + | chr6_2:79520128-79520147 | None:intergenic | 45.0% | |
AGTCTGAGCATAGTCACGTT+GGG | + | chr6_2:79520334-79520353 | None:intergenic | 45.0% | |
! | TGCCAGCTTCAATTTTCGCT+CGG | + | chr6_2:79520407-79520426 | None:intergenic | 45.0% |
TGAAGCTGGCAAATTAGAGC+TGG | - | chr6_2:79520416-79520435 | Msa0930450:CDS | 45.0% | |
TGGCAAATTAGAGCTGGAAG+CGG | - | chr6_2:79520422-79520441 | Msa0930450:CDS | 45.0% | |
CATCATCGAGTATGGAACGA+AGG | + | chr6_2:79520458-79520477 | None:intergenic | 45.0% | |
AGAGAGGACATCATCGAGTA+TGG | + | chr6_2:79520466-79520485 | None:intergenic | 45.0% | |
!! | CTCGTATTGGCCTTCACAAT+AGG | + | chr6_2:79520547-79520566 | None:intergenic | 45.0% |
! | TGTTGCGGGCTTTCTGTTTT+CGG | + | chr6_2:79520938-79520957 | None:intergenic | 45.0% |
AACAGAAAGCCCGCAACAAA+TGG | - | chr6_2:79520940-79520959 | Msa0930450:CDS | 45.0% | |
GAAGTTGTGCATGCATCTAG+CGG | - | chr6_2:79520997-79521016 | Msa0930450:CDS | 45.0% | |
TGCTGATGAACGCAACAACT+GGG | - | chr6_2:79521053-79521072 | Msa0930450:intron | 45.0% | |
TGTGTCGAAGACACTGGAAT+TGG | - | chr6_2:79521177-79521196 | Msa0930450:CDS | 45.0% | |
GAGCTATCTGCCTGAACAAA+AGG | + | chr6_2:79521237-79521256 | None:intergenic | 45.0% | |
TGCCTAGTTGAACTAATGGG+TGG | - | chr6_2:79521306-79521325 | Msa0930450:CDS | 45.0% | |
GACCACCCATTAGTTCAACT+AGG | + | chr6_2:79521311-79521330 | None:intergenic | 45.0% | |
!! | GGCTTTAAGCCCTCTAAAAC+TGG | + | chr6_2:79521454-79521473 | None:intergenic | 45.0% |
CTTAAAGCCGTTGTGGTTGA+TGG | - | chr6_2:79521465-79521484 | Msa0930450:intron | 45.0% | |
AGGTTTCCCATCAACCACAA+CGG | + | chr6_2:79521475-79521494 | None:intergenic | 45.0% | |
!! | AGCACCATTTTTCCCACACA+AGG | + | chr6_2:79521580-79521599 | None:intergenic | 45.0% |
AAAAATGGTGCTTCCAGCAC+AGG | - | chr6_2:79521588-79521607 | Msa0930450:intron | 45.0% | |
AAAATGGTGCTTCCAGCACA+GGG | - | chr6_2:79521589-79521608 | Msa0930450:intron | 45.0% | |
GAGAAGGATTCATGGGTTTG+TGG | - | chr6_2:79521903-79521922 | Msa0930450:intron | 45.0% | |
CATTCTGTTTCCAGTCCAGT+TGG | + | chr6_2:79521953-79521972 | None:intergenic | 45.0% | |
! | CAACTGGACTGGAAACAGAA+TGG | - | chr6_2:79521951-79521970 | Msa0930450:CDS | 45.0% |
CACCGTATCACTAAAACCTG+CGG | + | chr6_2:79522051-79522070 | None:intergenic | 45.0% | |
! | AGCTTGCCTTCAGCAAGTTT+TGG | - | chr6_2:79522103-79522122 | Msa0930450:CDS | 45.0% |
! | GCTTGCCTTCAGCAAGTTTT+GGG | - | chr6_2:79522104-79522123 | Msa0930450:CDS | 45.0% |
!! | CTGTTCCCAAAACTTGCTGA+AGG | + | chr6_2:79522112-79522131 | None:intergenic | 45.0% |
!!! | CTTCAGCAAGTTTTGGGAAC+AGG | - | chr6_2:79522110-79522129 | Msa0930450:CDS | 45.0% |
TCAGTTCGAAGCCTTCTGTT+CGG | - | chr6_2:79522176-79522195 | Msa0930450:intron | 45.0% | |
ATGACAATGGAGTAAACCGG+AGG | - | chr6_2:79522219-79522238 | Msa0930450:intron | 45.0% | |
TGACAATGGAGTAAACCGGA+GGG | - | chr6_2:79522220-79522239 | Msa0930450:intron | 45.0% | |
! | CGCCTTGAAAAACTTTGGAG+CGG | - | chr6_2:79522253-79522272 | Msa0930450:intron | 45.0% |
CAAACATACCCGTCCATTTC+TGG | + | chr6_2:79522368-79522387 | None:intergenic | 45.0% | |
TGAAGCAACTCGTCGAATTC+GGG | - | chr6_2:79522765-79522784 | Msa0930450:intron | 45.0% | |
CGAATGGTGAATGTGGTGAA+AGG | - | chr6_2:79522815-79522834 | Msa0930450:intron | 45.0% | |
TCTGCTGTCATGGCCAATAT+AGG | + | chr6_2:79522859-79522878 | None:intergenic | 45.0% | |
GCTTGGGATGATGAGTTATG+AGG | + | chr6_2:79523186-79523205 | None:intergenic | 45.0% | |
! | GACCAGATTGGTTGGTTGGT+TGG | + | chr6_2:79517449-79517468 | None:intergenic | 50.0% |
!! | GAAGGGAGAAGGTGCTTCTT+TGG | - | chr6_2:79517759-79517778 | Msa0930450:three_prime_UTR | 50.0% |
! | GGATGGCAAGAGCATGAACA+TGG | + | chr6_2:79518491-79518510 | None:intergenic | 50.0% |
AAACCCTTCTGCCATTGACC+AGG | - | chr6_2:79518536-79518555 | Msa0930450:CDS | 50.0% | |
CAAACCTGGTCAATGGCAGA+AGG | + | chr6_2:79518543-79518562 | None:intergenic | 50.0% | |
AAGTAGCGGCCTTTCGAAAG+CGG | + | chr6_2:79518703-79518722 | None:intergenic | 50.0% | |
TTCGAAAGGCCGCTACTTAG+TGG | - | chr6_2:79518705-79518724 | Msa0930450:CDS | 50.0% | |
TAGGCCACTCCACTAAGTAG+CGG | + | chr6_2:79518717-79518736 | None:intergenic | 50.0% | |
GAGCAGTTTGAGAAGCAGCA+TGG | - | chr6_2:79518765-79518784 | Msa0930450:CDS | 50.0% | |
GTTTGAGAAGCAGCATGGAG+TGG | - | chr6_2:79518770-79518789 | Msa0930450:CDS | 50.0% | |
! | AAAGAGAGGCTTCACCGGTT+AGG | - | chr6_2:79518808-79518827 | Msa0930450:CDS | 50.0% |
! | AAGAGAGGCTTCACCGGTTA+GGG | - | chr6_2:79518809-79518828 | Msa0930450:CDS | 50.0% |
GGTGCATACTCATCCCTAAC+CGG | + | chr6_2:79518825-79518844 | None:intergenic | 50.0% | |
GGTTAGGGATGAGTATGCAC+CGG | - | chr6_2:79518824-79518843 | Msa0930450:CDS | 50.0% | |
! | TGCACCGGTCATATTTGCTC+AGG | - | chr6_2:79518839-79518858 | Msa0930450:CDS | 50.0% |
TTGTGAACCATTCCACCGCT+TGG | - | chr6_2:79518920-79518939 | Msa0930450:CDS | 50.0% | |
AGCTCATTAAAGCGACCGCA+GGG | - | chr6_2:79519155-79519174 | Msa0930450:intron | 50.0% | |
GGAGCTAAAAGTTCGAGCAG+AGG | - | chr6_2:79519922-79519941 | Msa0930450:CDS | 50.0% | |
CAAGTGCCAACGACATGTCA+AGG | + | chr6_2:79519979-79519998 | None:intergenic | 50.0% | |
CTTGACATGTCGTTGGCACT+TGG | - | chr6_2:79519977-79519996 | Msa0930450:intron | 50.0% | |
CAGTCTGAGCATAGTCACGT+TGG | + | chr6_2:79520335-79520354 | None:intergenic | 50.0% | |
TGACTATGCTCAGACTGCTC+AGG | - | chr6_2:79520338-79520357 | Msa0930450:CDS | 50.0% | |
GACCGAGCGAAAATTGAAGC+TGG | - | chr6_2:79520402-79520421 | Msa0930450:CDS | 50.0% | |
CGAACACTGCCAGCTAAGAA+AGG | + | chr6_2:79520647-79520666 | None:intergenic | 50.0% | |
ATACTGCAGTTCACTGAGCG+AGG | - | chr6_2:79520886-79520905 | Msa0930450:CDS | 50.0% | |
CTGCTGATGAACGCAACAAC+TGG | - | chr6_2:79521052-79521071 | Msa0930450:intron | 50.0% | |
GTCTTCGACACAGACCATCA+AGG | + | chr6_2:79521169-79521188 | None:intergenic | 50.0% | |
ATGGTCTGTGTCGAAGACAC+TGG | - | chr6_2:79521171-79521190 | Msa0930450:CDS | 50.0% | |
TTCCTTTCTCGGCCCAAGAT+AGG | - | chr6_2:79521202-79521221 | Msa0930450:CDS | 50.0% | |
ATCCTATCTTGGGCCGAGAA+AGG | + | chr6_2:79521207-79521226 | None:intergenic | 50.0% | |
AAACTTTATAAGCCGGCCGC+AGG | - | chr6_2:79521335-79521354 | Msa0930450:CDS | 50.0% | |
!! | GAAAAGGTGCTTCCAACCTG+CGG | + | chr6_2:79521354-79521373 | None:intergenic | 50.0% |
TAGAGGGCTTAAAGCCGTTG+TGG | - | chr6_2:79521458-79521477 | Msa0930450:intron | 50.0% | |
! | CTAGTCACAGCAGCTCTAAC+AGG | + | chr6_2:79521495-79521514 | None:intergenic | 50.0% |
GGATTCATGGGTTTGTGGAG+AGG | - | chr6_2:79521908-79521927 | Msa0930450:intron | 50.0% | |
TCATGGGTTTGTGGAGAGGA+CGG | - | chr6_2:79521912-79521931 | Msa0930450:intron | 50.0% | |
GAAGCCACTGAGAGCTAGTA+TGG | - | chr6_2:79522076-79522095 | Msa0930450:CDS | 50.0% | |
CCACTGAGAGCTAGTATGGT+GGG | - | chr6_2:79522080-79522099 | Msa0930450:CDS | 50.0% | |
AACAGGCAAGAAGAGACAGC+TGG | - | chr6_2:79522127-79522146 | Msa0930450:CDS | 50.0% | |
ACAGGCAAGAAGAGACAGCT+GGG | - | chr6_2:79522128-79522147 | Msa0930450:CDS | 50.0% | |
CTGGGAAAAGAGTCGCCTAA+TGG | - | chr6_2:79522146-79522165 | Msa0930450:CDS | 50.0% | |
GCAGGCGCCTTGAAAAACTT+TGG | - | chr6_2:79522248-79522267 | Msa0930450:intron | 50.0% | |
! | GATGTGAAGTGTGCCGATAG+CGG | - | chr6_2:79522275-79522294 | Msa0930450:intron | 50.0% |
AAGAGCAGCTTTGCCGCTAT+CGG | + | chr6_2:79522291-79522310 | None:intergenic | 50.0% | |
AACTCGTCGAATTCGGGAGA+TGG | - | chr6_2:79522771-79522790 | Msa0930450:intron | 50.0% | |
ACAGCGAATGAGGAGACGAA+TGG | - | chr6_2:79522799-79522818 | Msa0930450:intron | 50.0% | |
GAGGAGACGAATGGTGAATG+TGG | - | chr6_2:79522808-79522827 | Msa0930450:intron | 50.0% | |
GGCTGTTGAGAGAAGGGAGA+AGG | - | chr6_2:79517748-79517767 | Msa0930450:three_prime_UTR | 55.0% | |
GCAGAATCAGCACCACCCTT+TGG | - | chr6_2:79518236-79518255 | Msa0930450:intron | 55.0% | |
AAGGCCGCTACTTAGTGGAG+TGG | - | chr6_2:79518710-79518729 | Msa0930450:CDS | 55.0% | |
GGGTTCTCATCATCTCGGTG+TGG | - | chr6_2:79519078-79519097 | Msa0930450:intron | 55.0% | |
GAGCTCATTAAAGCGACCGC+AGG | - | chr6_2:79519154-79519173 | Msa0930450:intron | 55.0% | |
!! | ACCAGAAGGCACCGCCAAAT+TGG | - | chr6_2:79519786-79519805 | Msa0930450:CDS | 55.0% |
TCCAATTTGGCGGTGCCTTC+TGG | + | chr6_2:79519790-79519809 | None:intergenic | 55.0% | |
AGCCGATGTTGCCAAGTCAC+AGG | - | chr6_2:79519946-79519965 | Msa0930450:intron | 55.0% | |
GCTTGGTCTGCTTCTACGCA+CGG | - | chr6_2:79520296-79520315 | Msa0930450:intron | 55.0% | |
GACTGCTCAGGCATGTGGTA+AGG | - | chr6_2:79520350-79520369 | Msa0930450:CDS | 55.0% | |
TTTATAAGCCGGCCGCAGGT+TGG | - | chr6_2:79521339-79521358 | Msa0930450:CDS | 55.0% | |
CATGGGTTTGTGGAGAGGAC+GGG | - | chr6_2:79521913-79521932 | Msa0930450:intron | 55.0% | |
GATCTTCAGTGTGCGCCAAC+TGG | - | chr6_2:79521935-79521954 | Msa0930450:intron | 55.0% | |
GCCACTGAGAGCTAGTATGG+TGG | - | chr6_2:79522079-79522098 | Msa0930450:CDS | 55.0% | |
! | CCCACCATACTAGCTCTCAG+TGG | + | chr6_2:79522083-79522102 | None:intergenic | 55.0% |
CAATGGAGTAAACCGGAGGG+TGG | - | chr6_2:79522223-79522242 | Msa0930450:intron | 55.0% | |
GTCGAATTCGGGAGATGGAG+AGG | - | chr6_2:79522776-79522795 | Msa0930450:intron | 55.0% | |
GATGGAGAGGACAGCGAATG+AGG | - | chr6_2:79522789-79522808 | Msa0930450:intron | 55.0% | |
ACTAAGTGGGGTCGGCTACA+TGG | - | chr6_2:79523530-79523549 | Msa0930450:five_prime_UTR | 55.0% | |
CGGCTAGGACCGCTTTCGAA+AGG | - | chr6_2:79518691-79518710 | Msa0930450:CDS | 60.0% | |
GCTCAGACTGCTCAGGCATG+TGG | - | chr6_2:79520345-79520364 | Msa0930450:CDS | 60.0% | |
TCAGTGTGCGCCAACTGGAC+TGG | - | chr6_2:79521940-79521959 | Msa0930450:intron | 60.0% | |
AGGTGCTTCCAACCTGCGGC+CGG | + | chr6_2:79521350-79521369 | None:intergenic | 65.0% | |
GTAAACCGGAGGGTGGCTGC+AGG | - | chr6_2:79522230-79522249 | Msa0930450:intron | 65.0% | |
AGGCGCCTGCAGCCACCCTC+CGG | + | chr6_2:79522238-79522257 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_2 | gene | 79517288 | 79523559 | 79517288 | ID=Msa0930450;Name=Msa0930450 |
chr6_2 | mRNA | 79517288 | 79523559 | 79517288 | ID=Msa0930450-mRNA-1;Parent=Msa0930450;Name=Msa0930450-mRNA-1;_AED=0.14;_eAED=0.14;_QI=541|1|1|1|0.83|0.76|13|545|1003 |
chr6_2 | exon | 79517288 | 79518085 | 79517288 | ID=Msa0930450-mRNA-1:exon:13741;Parent=Msa0930450-mRNA-1 |
chr6_2 | exon | 79518469 | 79518972 | 79518469 | ID=Msa0930450-mRNA-1:exon:13740;Parent=Msa0930450-mRNA-1 |
chr6_2 | exon | 79519237 | 79519952 | 79519237 | ID=Msa0930450-mRNA-1:exon:13739;Parent=Msa0930450-mRNA-1 |
chr6_2 | exon | 79520095 | 79520193 | 79520095 | ID=Msa0930450-mRNA-1:exon:13738;Parent=Msa0930450-mRNA-1 |
chr6_2 | exon | 79520326 | 79520555 | 79520326 | ID=Msa0930450-mRNA-1:exon:13737;Parent=Msa0930450-mRNA-1 |
chr6_2 | exon | 79520729 | 79520780 | 79520729 | ID=Msa0930450-mRNA-1:exon:13736;Parent=Msa0930450-mRNA-1 |
chr6_2 | exon | 79520880 | 79521066 | 79520880 | ID=Msa0930450-mRNA-1:exon:13735;Parent=Msa0930450-mRNA-1 |
chr6_2 | exon | 79521161 | 79521379 | 79521161 | ID=Msa0930450-mRNA-1:exon:13734;Parent=Msa0930450-mRNA-1 |
chr6_2 | exon | 79521671 | 79521840 | 79521671 | ID=Msa0930450-mRNA-1:exon:13733;Parent=Msa0930450-mRNA-1 |
chr6_2 | exon | 79521942 | 79522175 | 79521942 | ID=Msa0930450-mRNA-1:exon:13732;Parent=Msa0930450-mRNA-1 |
chr6_2 | exon | 79522290 | 79522781 | 79522290 | ID=Msa0930450-mRNA-1:exon:13731;Parent=Msa0930450-mRNA-1 |
chr6_2 | exon | 79523043 | 79523174 | 79523043 | ID=Msa0930450-mRNA-1:exon:13730;Parent=Msa0930450-mRNA-1 |
chr6_2 | exon | 79523295 | 79523559 | 79523295 | ID=Msa0930450-mRNA-1:exon:13729;Parent=Msa0930450-mRNA-1 |
chr6_2 | five_prime_UTR | 79523295 | 79523559 | 79523295 | ID=Msa0930450-mRNA-1:five_prime_utr;Parent=Msa0930450-mRNA-1 |
chr6_2 | five_prime_UTR | 79523043 | 79523174 | 79523043 | ID=Msa0930450-mRNA-1:five_prime_utr;Parent=Msa0930450-mRNA-1 |
chr6_2 | five_prime_UTR | 79522638 | 79522781 | 79522638 | ID=Msa0930450-mRNA-1:five_prime_utr;Parent=Msa0930450-mRNA-1 |
chr6_2 | CDS | 79522290 | 79522637 | 79522290 | ID=Msa0930450-mRNA-1:cds;Parent=Msa0930450-mRNA-1 |
chr6_2 | CDS | 79521942 | 79522175 | 79521942 | ID=Msa0930450-mRNA-1:cds;Parent=Msa0930450-mRNA-1 |
chr6_2 | CDS | 79521671 | 79521840 | 79521671 | ID=Msa0930450-mRNA-1:cds;Parent=Msa0930450-mRNA-1 |
chr6_2 | CDS | 79521161 | 79521379 | 79521161 | ID=Msa0930450-mRNA-1:cds;Parent=Msa0930450-mRNA-1 |
chr6_2 | CDS | 79520880 | 79521066 | 79520880 | ID=Msa0930450-mRNA-1:cds;Parent=Msa0930450-mRNA-1 |
chr6_2 | CDS | 79520729 | 79520780 | 79520729 | ID=Msa0930450-mRNA-1:cds;Parent=Msa0930450-mRNA-1 |
chr6_2 | CDS | 79520326 | 79520555 | 79520326 | ID=Msa0930450-mRNA-1:cds;Parent=Msa0930450-mRNA-1 |
chr6_2 | CDS | 79520095 | 79520193 | 79520095 | ID=Msa0930450-mRNA-1:cds;Parent=Msa0930450-mRNA-1 |
chr6_2 | CDS | 79519237 | 79519952 | 79519237 | ID=Msa0930450-mRNA-1:cds;Parent=Msa0930450-mRNA-1 |
chr6_2 | CDS | 79518469 | 79518972 | 79518469 | ID=Msa0930450-mRNA-1:cds;Parent=Msa0930450-mRNA-1 |
chr6_2 | CDS | 79517833 | 79518085 | 79517833 | ID=Msa0930450-mRNA-1:cds;Parent=Msa0930450-mRNA-1 |
chr6_2 | three_prime_UTR | 79517288 | 79517832 | 79517288 | ID=Msa0930450-mRNA-1:three_prime_utr;Parent=Msa0930450-mRNA-1 |
Gene Sequence |
Protein sequence |