Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0578180 | KEH30320.1 | 75.595 | 336 | 38 | 4 | 1 | 326 | 1 | 302 | 2.58e-172 | 490 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0578180 | sp|Q5ZJE4|SPRNG_CHICK | 39.316 | 117 | 48 | 6 | 41 | 139 | 75 | 186 | 4.58e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0578180 | A0A072UWU4 | 75.595 | 336 | 38 | 4 | 1 | 326 | 1 | 302 | 1.23e-172 | 490 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0578180 | Msa0604510 | 0.809857 | 1.537769e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0578180 | MtrunA17_Chr4g0033501 | 83.571 | 280 | 23 | 3 | 1 | 268 | 1 | 269 | 1.51e-166 | 464 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0578180 | AT3G59390.1 | 56.929 | 267 | 89 | 4 | 14 | 268 | 16 | 268 | 2.55e-94 | 281 |
| Msa0578180 | AT3G59390.2 | 56.929 | 267 | 89 | 4 | 14 | 268 | 16 | 268 | 2.55e-94 | 281 |
Find 79 sgRNAs with CRISPR-Local
Find 446 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGAACTTGTATTAAAAT+TGG | 0.155050 | 4_1:-82709913 | None:intergenic |
| TTAAGCACCACAAGTTTATT+TGG | 0.192725 | 4_1:-82707709 | None:intergenic |
| TTCAAAAGAATCTTAACTTA+TGG | 0.213944 | 4_1:+82709949 | Msa0578180:three_prime_UTR |
| GAATAGGCTAAATGGTAAAA+AGG | 0.237047 | 4_1:+82709828 | Msa0578180:three_prime_UTR |
| AGGCTGCATTTGGAAAATTT+AGG | 0.267476 | 4_1:+82709776 | Msa0578180:three_prime_UTR |
| TCCGTGTATAAACATGATTC+TGG | 0.284960 | 4_1:-82709241 | None:intergenic |
| GGCTGCATTTGGAAAATTTA+GGG | 0.285748 | 4_1:+82709777 | Msa0578180:three_prime_UTR |
| CAATTATTACCATATACTTT+GGG | 0.311473 | 4_1:-82708169 | None:intergenic |
| TCTCTACCGTCCAATTCTTC+TGG | 0.316613 | 4_1:+82706210 | Msa0578180:CDS |
| TCTCATTTATTACACTAGTT+TGG | 0.317513 | 4_1:+82709983 | Msa0578180:three_prime_UTR |
| TTATGACGCCCCAAAGTATA+TGG | 0.324273 | 4_1:+82708160 | Msa0578180:CDS |
| ACAATTATTACCATATACTT+TGG | 0.332093 | 4_1:-82708170 | None:intergenic |
| TCTCGTTGTTGTCCTCAAAC+TGG | 0.336976 | 4_1:+82704086 | Msa0578180:CDS |
| AACGGCATCCATGTTGTTGC+TGG | 0.341847 | 4_1:+82707533 | Msa0578180:CDS |
| GGGATAGAGAATAGGCTAAA+TGG | 0.342839 | 4_1:+82709820 | Msa0578180:three_prime_UTR |
| GAAACATTACTTGCAGTAGA+AGG | 0.354812 | 4_1:-82704411 | None:intergenic |
| ACGCTACTTCAGGCTGCATT+TGG | 0.355935 | 4_1:+82709766 | Msa0578180:three_prime_UTR |
| AAAGAACTTGTATTAAAATT+GGG | 0.364592 | 4_1:-82709912 | None:intergenic |
| TTCTGCAATAACACCGTTCA+AGG | 0.367982 | 4_1:+82703213 | Msa0578180:CDS |
| TGCAGACTTACCAGAAGAAT+TGG | 0.370851 | 4_1:-82706220 | None:intergenic |
| GATGTTGCAAGATTTATTAA+AGG | 0.373910 | 4_1:-82710052 | None:intergenic |
| GGTTAAGACATTACCATTGC+AGG | 0.380352 | 4_1:-82704288 | None:intergenic |
| GAGAATTTCTTCCCAGTTTG+AGG | 0.383527 | 4_1:-82704098 | None:intergenic |
| TAAGCACCACAAGTTTATTT+GGG | 0.392921 | 4_1:-82707708 | None:intergenic |
| ATCGCTATCAGAAAAGATAT+TGG | 0.401749 | 4_1:+82703174 | Msa0578180:CDS |
| ATGTTGCAAGATTTATTAAA+GGG | 0.435398 | 4_1:-82710051 | None:intergenic |
| ACTGGAAAGAACGCTACTTC+AGG | 0.453712 | 4_1:+82709756 | Msa0578180:three_prime_UTR |
| CGCTACCGCAATAGCATTGG+AGG | 0.472186 | 4_1:-82709064 | None:intergenic |
| GGAGAAAATGAAAAGGCAAC+AGG | 0.486872 | 4_1:-82709043 | None:intergenic |
| GAGCTGCAAGGGAGGTTGCT+TGG | 0.495382 | 4_1:+82708103 | Msa0578180:CDS |
| AGACACAAGGGATAGAGAAT+AGG | 0.496762 | 4_1:+82709812 | Msa0578180:three_prime_UTR |
| CTCGTTGTTGTCCTCAAACT+GGG | 0.497265 | 4_1:+82704087 | Msa0578180:CDS |
| CAATCTATACTTTCTTGTGA+TGG | 0.499244 | 4_1:+82709268 | Msa0578180:CDS |
| CGTTCTTTCCAGTTCGTGAA+AGG | 0.504484 | 4_1:-82709746 | None:intergenic |
| GATGAAGATGAGTAATGTTA+CGG | 0.504863 | 4_1:-82703121 | None:intergenic |
| GTGAAGAATGAAAGGTGAAA+GGG | 0.516392 | 4_1:+82710005 | Msa0578180:three_prime_UTR |
| AGTGTATTTGACTACTGTGC+TGG | 0.523981 | 4_1:+82704930 | Msa0578180:CDS |
| GCAATAACACCGTTCAAGGC+AGG | 0.524622 | 4_1:+82703217 | Msa0578180:CDS |
| TAGCGCTACCGCAATAGCAT+TGG | 0.524715 | 4_1:-82709067 | None:intergenic |
| GGAGGTTGCTTGGCAAGTGT+TGG | 0.527938 | 4_1:+82708113 | Msa0578180:CDS |
| GCGTCATAAACAACTTCAGC+AGG | 0.537785 | 4_1:-82708146 | None:intergenic |
| CTTAATTTAACAGACAAAGA+AGG | 0.542918 | 4_1:+82704359 | Msa0578180:intron |
| TACCGTTGTTGTCGGAAAGA+AGG | 0.543481 | 4_1:-82703242 | None:intergenic |
| GGATACCATACCGTTGTTGT+CGG | 0.544227 | 4_1:-82703250 | None:intergenic |
| CTAGTTTGGTGAAGAATGAA+AGG | 0.546211 | 4_1:+82709997 | Msa0578180:three_prime_UTR |
| ACAACATAAAAGCTAATGGA+TGG | 0.549269 | 4_1:-82709701 | None:intergenic |
| GGTGAAGAATGAAAGGTGAA+AGG | 0.551029 | 4_1:+82710004 | Msa0578180:three_prime_UTR |
| ATGGTATATTAAATTTCTCA+AGG | 0.552194 | 4_1:-82709682 | None:intergenic |
| GAAACGAGGGGAAAACTGCT+TGG | 0.553818 | 4_1:-82710074 | None:intergenic |
| TGAACGGTGTTATTGCAGAA+AGG | 0.556447 | 4_1:-82703210 | None:intergenic |
| TTGCTGTCTCAATCCTGCAA+TGG | 0.563221 | 4_1:+82704275 | Msa0578180:CDS |
| CATTGGAGGAGAAAATGAAA+AGG | 0.565420 | 4_1:-82709050 | None:intergenic |
| TTTCTCCTCCAATGCTATTG+CGG | 0.570597 | 4_1:+82709059 | Msa0578180:CDS |
| AATTATTACCATATACTTTG+GGG | 0.574079 | 4_1:-82708168 | None:intergenic |
| TCTTTCCGACAACAACGGTA+TGG | 0.584868 | 4_1:+82703245 | Msa0578180:CDS |
| ATGGTTCGCATCAGCACACA+AGG | 0.588855 | 4_1:+82709287 | Msa0578180:CDS |
| AAGAAGGAACCTGCCTTGAA+CGG | 0.591557 | 4_1:-82703226 | None:intergenic |
| AATTCAGTTTGCAAGTCAAG+AGG | 0.592476 | 4_1:+82707673 | Msa0578180:CDS |
| GTGAAAGGGAGAATTATACT+TGG | 0.608889 | 4_1:+82710019 | Msa0578180:three_prime_UTR |
| CTCACAGAAGCAAGGCTGAA+CGG | 0.611655 | 4_1:+82707515 | Msa0578180:CDS |
| ACGGCATCCATGTTGTTGCT+GGG | 0.616633 | 4_1:+82707534 | Msa0578180:CDS |
| AAATACATGAGCTGCAAGGG+AGG | 0.623821 | 4_1:+82708095 | Msa0578180:CDS |
| TTTACCTCCCAGCAACAACA+TGG | 0.629793 | 4_1:-82707541 | None:intergenic |
| ACTACTGTGCTGGAAGATGT+CGG | 0.631079 | 4_1:+82704940 | Msa0578180:CDS |
| TGCATTTGGAAAATTTAGGG+AGG | 0.633938 | 4_1:+82709780 | Msa0578180:three_prime_UTR |
| GAAGATGAGTAATGTTACGG+TGG | 0.634054 | 4_1:-82703118 | None:intergenic |
| ATAGCACTCTCACAGAAGCA+AGG | 0.642158 | 4_1:+82707507 | Msa0578180:CDS |
| TCCAGAATCATGTTTATACA+CGG | 0.645067 | 4_1:+82709240 | Msa0578180:CDS |
| TTCCTTCTTTCCGACAACAA+CGG | 0.650638 | 4_1:+82703240 | Msa0578180:CDS |
| TGGACGGGCTGGTATCGAAG+TGG | 0.653349 | 4_1:+82709609 | Msa0578180:CDS |
| GACTTACCAGAAGAATTGGA+CGG | 0.659170 | 4_1:-82706216 | None:intergenic |
| AGGATGAGATAGAGACACAA+GGG | 0.662816 | 4_1:+82709800 | Msa0578180:three_prime_UTR |
| TCGGCATAGTTCTGAGAGTG+TGG | 0.674151 | 4_1:+82704959 | Msa0578180:CDS |
| ACGGTAGAGAAAAGCAATGG+TGG | 0.678929 | 4_1:-82706197 | None:intergenic |
| ATGTGTCCCAAATAAACTTG+TGG | 0.680538 | 4_1:+82707702 | Msa0578180:CDS |
| GCATCCATGTTGTTGCTGGG+AGG | 0.683613 | 4_1:+82707537 | Msa0578180:CDS |
| GAGGATGAGATAGAGACACA+AGG | 0.695353 | 4_1:+82709799 | Msa0578180:three_prime_UTR |
| TGGACGGTAGAGAAAAGCAA+TGG | 0.695543 | 4_1:-82706200 | None:intergenic |
| AACACAATTACAAGGCACTG+AGG | 0.728466 | 4_1:-82706253 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAGAACAAAATATTATT+TGG | + | chr4_1:82705829-82705848 | Msa0578180:intron | 10.0% |
| !! | ATATCATCTTAAATTTATAT+AGG | - | chr4_1:82708273-82708292 | None:intergenic | 10.0% |
| !! | AAAATTTAGTAATGTTAAAA+GGG | - | chr4_1:82709360-82709379 | None:intergenic | 10.0% |
| !!! | TTTGAAATTTAAAACAAAAA+TGG | - | chr4_1:82709561-82709580 | None:intergenic | 10.0% |
| !! | GAAAATAAAGAAAAGAAAAA+AGG | - | chr4_1:82703274-82703293 | None:intergenic | 15.0% |
| !!! | TTACATTCTTATTATTTTGT+AGG | + | chr4_1:82704029-82704048 | Msa0578180:intron | 15.0% |
| !! | AAAGTGAAAATAACAAATAA+TGG | + | chr4_1:82704178-82704197 | Msa0578180:intron | 15.0% |
| !! | TATAGAATAATGTATTAATG+AGG | - | chr4_1:82705799-82705818 | None:intergenic | 15.0% |
| !!! | TATAATTTTATTTACTTGGA+TGG | + | chr4_1:82707841-82707860 | Msa0578180:intron | 15.0% |
| !! | ATTTAAATTGATATTTGCTT+TGG | + | chr4_1:82709204-82709223 | Msa0578180:intron | 15.0% |
| !! | TTTAAATTGATATTTGCTTT+GGG | + | chr4_1:82709205-82709224 | Msa0578180:intron | 15.0% |
| !! | CAAAATTTAGTAATGTTAAA+AGG | - | chr4_1:82709361-82709380 | None:intergenic | 15.0% |
| !! | AAAGAACTTGTATTAAAATT+GGG | - | chr4_1:82709915-82709934 | None:intergenic | 15.0% |
| !! | AAAAGAACTTGTATTAAAAT+TGG | - | chr4_1:82709916-82709935 | None:intergenic | 15.0% |
| !! | ATTATGTTCAATTATGTTAC+CGG | - | chr4_1:82703361-82703380 | None:intergenic | 20.0% |
| !! | AACAAAACAAAAAAGAAGTT+AGG | - | chr4_1:82704142-82704161 | None:intergenic | 20.0% |
| !! | ACAAACATCATATAACTAAT+TGG | + | chr4_1:82704893-82704912 | Msa0578180:intron | 20.0% |
| !! | CAATTTCAAAAACAATAAGA+TGG | - | chr4_1:82705007-82705026 | None:intergenic | 20.0% |
| !! | AATCAGCATAACAATTTATT+TGG | + | chr4_1:82705226-82705245 | Msa0578180:intron | 20.0% |
| !! | TGATTGTGAATTTAAACAAT+AGG | - | chr4_1:82705531-82705550 | None:intergenic | 20.0% |
| !!! | TTTACAATTCAAGTTTACAA+CGG | - | chr4_1:82705591-82705610 | None:intergenic | 20.0% |
| !! | CATTTACCAACTAATATATT+TGG | - | chr4_1:82705673-82705692 | None:intergenic | 20.0% |
| !!! | ATCTTGTTATTTAATATTCC+AGG | + | chr4_1:82706146-82706165 | Msa0578180:intron | 20.0% |
| !!! | GGTAAATATATTTATGCTTT+TGG | + | chr4_1:82707425-82707444 | Msa0578180:intron | 20.0% |
| !! | TGTTGCTAATATATTTCAAT+GGG | + | chr4_1:82707777-82707796 | Msa0578180:intron | 20.0% |
| !!! | GACGTATAATTTTATTTACT+TGG | + | chr4_1:82707837-82707856 | Msa0578180:intron | 20.0% |
| !!! | AAGCATATTTAAAGTATTTC+TGG | + | chr4_1:82707878-82707897 | Msa0578180:intron | 20.0% |
| !! | AATTATTACCATATACTTTG+GGG | - | chr4_1:82708171-82708190 | None:intergenic | 20.0% |
| !! | CAATTATTACCATATACTTT+GGG | - | chr4_1:82708172-82708191 | None:intergenic | 20.0% |
| !! | ACAATTATTACCATATACTT+TGG | - | chr4_1:82708173-82708192 | None:intergenic | 20.0% |
| !! | ATGGTATATTAAATTTCTCA+AGG | - | chr4_1:82709685-82709704 | None:intergenic | 20.0% |
| !!! | TTTTACAACATAAAAGCTAA+TGG | - | chr4_1:82709708-82709727 | None:intergenic | 20.0% |
| !!! | AGATTCTTTTGAAAAACAAA+AGG | - | chr4_1:82709942-82709961 | None:intergenic | 20.0% |
| !! | TTCAAAAGAATCTTAACTTA+TGG | + | chr4_1:82709949-82709968 | Msa0578180:three_prime_UTR | 20.0% |
| !! | ATGTTGCAAGATTTATTAAA+GGG | - | chr4_1:82710054-82710073 | None:intergenic | 20.0% |
| ! | TTGAAATGTAAAACTGTTTC+TGG | + | chr4_1:82703423-82703442 | Msa0578180:intron | 25.0% |
| ! | ATTTGAATACACTAACGTAA+AGG | - | chr4_1:82703636-82703655 | None:intergenic | 25.0% |
| !!! | AAAATTGATTTTGACGTGTT+TGG | + | chr4_1:82703750-82703769 | Msa0578180:intron | 25.0% |
| !! | TAAGAATGTAAAAGTGTGTT+CGG | - | chr4_1:82704020-82704039 | None:intergenic | 25.0% |
| !! | TTGTGTTTAATAATTTGCAG+TGG | + | chr4_1:82704204-82704223 | Msa0578180:intron | 25.0% |
| ! | CTTAATTTAACAGACAAAGA+AGG | + | chr4_1:82704359-82704378 | Msa0578180:intron | 25.0% |
| ! | CTATTGTCAAAGAGAAAATA+TGG | + | chr4_1:82704604-82704623 | Msa0578180:intron | 25.0% |
| ! | ACATATACAAGAGATTCTTT+CGG | - | chr4_1:82704836-82704855 | None:intergenic | 25.0% |
| ! | TCTAAATCTAGACATTTGAA+GGG | + | chr4_1:82705166-82705185 | Msa0578180:intron | 25.0% |
| ! | CAGTAACCAAATATATTAGT+TGG | + | chr4_1:82705664-82705683 | Msa0578180:intron | 25.0% |
| !!! | TTTTATTTCCTATGTTTGAC+TGG | - | chr4_1:82705716-82705735 | None:intergenic | 25.0% |
| ! | TAGAAACTAACACAATTACA+AGG | - | chr4_1:82706264-82706283 | None:intergenic | 25.0% |
| !!! | AACTGATGAGATTTTAGAAT+CGG | - | chr4_1:82706311-82706330 | None:intergenic | 25.0% |
| !!! | TTGTGGAATGCTATTTTTAA+GGG | + | chr4_1:82706528-82706547 | Msa0578180:intron | 25.0% |
| ! | TCGATAGAATAGTTTACATT+TGG | + | chr4_1:82706898-82706917 | Msa0578180:intron | 25.0% |
| !!! | TTGTGGAATGCTATTTTTAA+GGG | - | chr4_1:82706528-82706547 | None:intergenic | 25.0% |
| !!! | ATTGTGGAATGCTATTTTTA+AGG | - | chr4_1:82707303-82707322 | None:intergenic | 25.0% |
| ! | TTCCACAATAAACTCAATAT+TGG | + | chr4_1:82707314-82707333 | Msa0578180:intron | 25.0% |
| ! | TTAACCTCAACTAAAAAGAA+GGG | - | chr4_1:82707580-82707599 | None:intergenic | 25.0% |
| ! | ATTAACCTCAACTAAAAAGA+AGG | - | chr4_1:82707581-82707600 | None:intergenic | 25.0% |
| ! | CTGTTGCTAATATATTTCAA+TGG | + | chr4_1:82707776-82707795 | Msa0578180:intron | 25.0% |
| ! | AGCACTAAGCATTAATAAAA+TGG | - | chr4_1:82707929-82707948 | None:intergenic | 25.0% |
| !! | TTTTATTAATGCTTAGTGCT+TGG | + | chr4_1:82707929-82707948 | Msa0578180:intron | 25.0% |
| ! | TAAGAAGAAAACAAACATGT+TGG | + | chr4_1:82708202-82708221 | Msa0578180:intron | 25.0% |
| ! | TTCCAGATATTGATAAATAG+AGG | + | chr4_1:82708226-82708245 | Msa0578180:intron | 25.0% |
| ! | AACCTCTATTTATCAATATC+TGG | - | chr4_1:82708231-82708250 | None:intergenic | 25.0% |
| !! | TAGTCTTAGAATTTGTAGTT+GGG | + | chr4_1:82708337-82708356 | Msa0578180:intron | 25.0% |
| ! | GCATGAATTCAAATCAATAT+AGG | - | chr4_1:82709129-82709148 | None:intergenic | 25.0% |
| ! | TTGTAAGGAAACACATTAAT+TGG | - | chr4_1:82709530-82709549 | None:intergenic | 25.0% |
| ! | AATAGGCTAAATGGTAAAAA+GGG | + | chr4_1:82709829-82709848 | Msa0578180:three_prime_UTR | 25.0% |
| ! | TCTCATTTATTACACTAGTT+TGG | + | chr4_1:82709983-82710002 | Msa0578180:three_prime_UTR | 25.0% |
| ! | GATGTTGCAAGATTTATTAA+AGG | - | chr4_1:82710055-82710074 | None:intergenic | 25.0% |
| GATGAAGATGAGTAATGTTA+CGG | - | chr4_1:82703124-82703143 | None:intergenic | 30.0% | |
| !! | AATATCTTTTCTGATAGCGA+TGG | - | chr4_1:82703175-82703194 | None:intergenic | 30.0% |
| ATCGCTATCAGAAAAGATAT+TGG | + | chr4_1:82703174-82703193 | Msa0578180:CDS | 30.0% | |
| !! | AATATTTCCTGTGTCACTTT+AGG | + | chr4_1:82703301-82703320 | Msa0578180:intron | 30.0% |
| !! | AAATGTAAAACTGTTTCTGG+AGG | + | chr4_1:82703426-82703445 | Msa0578180:intron | 30.0% |
| !!! | AGGTGTTGAATTGATTTTAG+AGG | + | chr4_1:82703446-82703465 | Msa0578180:intron | 30.0% |
| TTATGTATGCAATGCACTTT+CGG | + | chr4_1:82704052-82704071 | Msa0578180:intron | 30.0% | |
| TTTGTCTGTTAAATTAAGCC+CGG | - | chr4_1:82704357-82704376 | None:intergenic | 30.0% | |
| TATTGTTGCATGTAAACGTA+AGG | + | chr4_1:82704511-82704530 | Msa0578180:intron | 30.0% | |
| TGACAATAGAAATAGCTTAC+AGG | - | chr4_1:82704593-82704612 | None:intergenic | 30.0% | |
| TACTTTCATATACGCTATCT+TGG | + | chr4_1:82704641-82704660 | Msa0578180:intron | 30.0% | |
| TGAAGATGAAAAGGAAAAAG+GGG | - | chr4_1:82704790-82704809 | None:intergenic | 30.0% | |
| CTGAAGATGAAAAGGAAAAA+GGG | - | chr4_1:82704791-82704810 | None:intergenic | 30.0% | |
| ACATCATATAACTAATTGGC+AGG | + | chr4_1:82704897-82704916 | Msa0578180:intron | 30.0% | |
| CATCATATAACTAATTGGCA+GGG | + | chr4_1:82704898-82704917 | Msa0578180:intron | 30.0% | |
| TTCAAAAACAATAAGATGGC+AGG | - | chr4_1:82705003-82705022 | None:intergenic | 30.0% | |
| ! | TGGAAAGTGTATGTTATTCA+AGG | - | chr4_1:82705059-82705078 | None:intergenic | 30.0% |
| ATACACTTTCCATATTAGCA+AGG | + | chr4_1:82705067-82705086 | Msa0578180:intron | 30.0% | |
| AATAAGCAACCTTGCTAATA+TGG | - | chr4_1:82705079-82705098 | None:intergenic | 30.0% | |
| ! | CATGCACAAAACTATTTTCA+TGG | + | chr4_1:82705100-82705119 | Msa0578180:intron | 30.0% |
| TAGATTTAGACTACTATGCA+AGG | - | chr4_1:82705156-82705175 | None:intergenic | 30.0% | |
| GTCTAAATCTAGACATTTGA+AGG | + | chr4_1:82705165-82705184 | Msa0578180:intron | 30.0% | |
| CTAAATCTAGACATTTGAAG+GGG | + | chr4_1:82705167-82705186 | Msa0578180:intron | 30.0% | |
| TGAAAATTCCAGTCAAACAT+AGG | + | chr4_1:82705705-82705724 | Msa0578180:intron | 30.0% | |
| TGTATTAATGAGGTCAAGTA+TGG | - | chr4_1:82705789-82705808 | None:intergenic | 30.0% | |
| AAACCGAATATCGTAGAAAA+TGG | + | chr4_1:82705891-82705910 | Msa0578180:intron | 30.0% | |
| ACAGTAGCATATTATTCCTA+AGG | - | chr4_1:82706341-82706360 | None:intergenic | 30.0% | |
| ATATCGAGTAGTTAAGTAGA+TGG | + | chr4_1:82706388-82706407 | Msa0578180:intron | 30.0% | |
| !! | ATGTCATTTGAATGGATTGT+AGG | - | chr4_1:82706419-82706438 | None:intergenic | 30.0% |
| ! | GAAGTACAATGTCATTTGAA+TGG | - | chr4_1:82706427-82706446 | None:intergenic | 30.0% |
| ACATTGTACTTCGTATTCAT+TGG | + | chr4_1:82706435-82706454 | Msa0578180:intron | 30.0% | |
| CATTGTACTTCGTATTCATT+GGG | + | chr4_1:82706436-82706455 | Msa0578180:intron | 30.0% | |
| ACTCAACTTTGACTGAATAT+TGG | - | chr4_1:82706506-82706525 | None:intergenic | 30.0% | |
| !!! | GTTGTGGAATGCTATTTTTA+AGG | + | chr4_1:82706527-82706546 | Msa0578180:intron | 30.0% |
| !! | GAATGTGTAACACTTTTTGA+GGG | - | chr4_1:82706614-82706633 | None:intergenic | 30.0% |
| !! | AGAATGTGTAACACTTTTTG+AGG | - | chr4_1:82706615-82706634 | None:intergenic | 30.0% |
| TAAACAGATTATGGGATAAG+TGG | + | chr4_1:82707244-82707263 | Msa0578180:intron | 30.0% | |
| AAACAGATTATGGGATAAGT+GGG | + | chr4_1:82707245-82707264 | Msa0578180:intron | 30.0% | |
| AGCCAATATTGAGTTTATTG+TGG | - | chr4_1:82707319-82707338 | None:intergenic | 30.0% | |
| ! | TTTTCATGTATTGAATCCAG+TGG | + | chr4_1:82707481-82707500 | Msa0578180:intron | 30.0% |
| !!! | ATATCCCTTCTTTTTAGTTG+AGG | + | chr4_1:82707573-82707592 | Msa0578180:intron | 30.0% |
| TAAGCACCACAAGTTTATTT+GGG | - | chr4_1:82707711-82707730 | None:intergenic | 30.0% | |
| TTAAGCACCACAAGTTTATT+TGG | - | chr4_1:82707712-82707731 | None:intergenic | 30.0% | |
| ATCAATTGATCTTCGTTATG+TGG | + | chr4_1:82708061-82708080 | Msa0578180:intron | 30.0% | |
| TCAATTGATCTTCGTTATGT+GGG | + | chr4_1:82708062-82708081 | Msa0578180:intron | 30.0% | |
| !! | ATTCTAAGACTAGTTATGCA+GGG | - | chr4_1:82708329-82708348 | None:intergenic | 30.0% |
| !! | AATTCTAAGACTAGTTATGC+AGG | - | chr4_1:82708330-82708349 | None:intergenic | 30.0% |
| !! | CTAGTCTTAGAATTTGTAGT+TGG | + | chr4_1:82708336-82708355 | Msa0578180:intron | 30.0% |
| TGAACAAGTGTTTATAAGTG+GGG | - | chr4_1:82708406-82708425 | None:intergenic | 30.0% | |
| CTGAACAAGTGTTTATAAGT+GGG | - | chr4_1:82708407-82708426 | None:intergenic | 30.0% | |
| TGCTACCATATTAGAAATCA+TGG | + | chr4_1:82708567-82708586 | Msa0578180:intron | 30.0% | |
| CACAACCATGATTTCTAATA+TGG | - | chr4_1:82708575-82708594 | None:intergenic | 30.0% | |
| AGAACAAGTGTTTATAAGTG+GGG | - | chr4_1:82708641-82708660 | None:intergenic | 30.0% | |
| CAGAACAAGTGTTTATAAGT+GGG | - | chr4_1:82708642-82708661 | None:intergenic | 30.0% | |
| ! | ACATGGAGTTTGGTAATTAA+AGG | - | chr4_1:82708964-82708983 | None:intergenic | 30.0% |
| TTAATTACCAAACTCCATGT+TGG | + | chr4_1:82708964-82708983 | Msa0578180:intron | 30.0% | |
| TCATTACACAATCTATACCA+AGG | + | chr4_1:82709165-82709184 | Msa0578180:intron | 30.0% | |
| TCCAGAATCATGTTTATACA+CGG | + | chr4_1:82709240-82709259 | Msa0578180:CDS | 30.0% | |
| CAATCTATACTTTCTTGTGA+TGG | + | chr4_1:82709268-82709287 | Msa0578180:CDS | 30.0% | |
| !! | GTTTGTTTTCTCTTGTAATG+CGG | + | chr4_1:82709469-82709488 | Msa0578180:intron | 30.0% |
| TTGTTTGACTAACTTTCTTC+AGG | + | chr4_1:82709494-82709513 | Msa0578180:intron | 30.0% | |
| AAAATGGAGTGAAGTTTGTA+AGG | - | chr4_1:82709545-82709564 | None:intergenic | 30.0% | |
| !!! | CAACTATTGTTTTGATGGTA+TGG | + | chr4_1:82709632-82709651 | Msa0578180:CDS | 30.0% |
| !!! | TATTGTTTTGATGGTATGGA+AGG | + | chr4_1:82709636-82709655 | Msa0578180:CDS | 30.0% |
| ACAACATAAAAGCTAATGGA+TGG | - | chr4_1:82709704-82709723 | None:intergenic | 30.0% | |
| GAATAGGCTAAATGGTAAAA+AGG | + | chr4_1:82709828-82709847 | Msa0578180:three_prime_UTR | 30.0% | |
| TGAACATAATCACATGTGTC+AGG | + | chr4_1:82703371-82703390 | Msa0578180:intron | 35.0% | |
| GAACATAATCACATGTGTCA+GGG | + | chr4_1:82703372-82703391 | Msa0578180:intron | 35.0% | |
| TGAATACACTAACGTAAAGG+TGG | - | chr4_1:82703633-82703652 | None:intergenic | 35.0% | |
| ! | TAAAAGTGTGTTCGGTTCTA+TGG | - | chr4_1:82704012-82704031 | None:intergenic | 35.0% |
| AAGGTGAAAAATCAAAAGGC+AGG | - | chr4_1:82704312-82704331 | None:intergenic | 35.0% | |
| GAAACATTACTTGCAGTAGA+AGG | - | chr4_1:82704414-82704433 | None:intergenic | 35.0% | |
| TGTTTATCTGTGTCTGTATC+TGG | - | chr4_1:82704747-82704766 | None:intergenic | 35.0% | |
| ATGAAAAGGAAAAAGGGGTA+GGG | - | chr4_1:82704785-82704804 | None:intergenic | 35.0% | |
| GCTGAAGATGAAAAGGAAAA+AGG | - | chr4_1:82704792-82704811 | None:intergenic | 35.0% | |
| GTTAGAAGCTGAAGATGAAA+AGG | - | chr4_1:82704799-82704818 | None:intergenic | 35.0% | |
| TCTTTCGGTTACATAAGAAC+AGG | - | chr4_1:82704821-82704840 | None:intergenic | 35.0% | |
| CTCTAACAAGTCAAGAAGAT+AGG | - | chr4_1:82705129-82705148 | None:intergenic | 35.0% | |
| !! | CTATCTTCTTGACTTGTTAG+AGG | + | chr4_1:82705127-82705146 | Msa0578180:intron | 35.0% |
| CATTCAAGACACGCTAAAAA+TGG | + | chr4_1:82705289-82705308 | Msa0578180:intron | 35.0% | |
| GGACAACATAACAACTTGAA+CGG | + | chr4_1:82705428-82705447 | Msa0578180:intron | 35.0% | |
| GACAACATAACAACTTGAAC+GGG | + | chr4_1:82705429-82705448 | Msa0578180:intron | 35.0% | |
| GCTGTCAAATCTGAGAATTT+AGG | + | chr4_1:82705553-82705572 | Msa0578180:intron | 35.0% | |
| GTCAAGTATGGCATTGTAAT+TGG | - | chr4_1:82705777-82705796 | None:intergenic | 35.0% | |
| TATGCAGTGCAACATGTATA+GGG | - | chr4_1:82705863-82705882 | None:intergenic | 35.0% | |
| ! | GGTCCATTTTCTACGATATT+CGG | - | chr4_1:82705897-82705916 | None:intergenic | 35.0% |
| TGGCTACAATATGTGTAGTT+TGG | - | chr4_1:82705918-82705937 | None:intergenic | 35.0% | |
| ! | TCTGACATTAGACATGGTTT+TGG | - | chr4_1:82705938-82705957 | None:intergenic | 35.0% |
| !!! | ATCACTTGTTTTTACAGCCT+AGG | + | chr4_1:82706052-82706071 | Msa0578180:intron | 35.0% |
| AAATGCACTCATCATAGACA+TGG | - | chr4_1:82706114-82706133 | None:intergenic | 35.0% | |
| ! | GATAAGCATTTTCATGAACC+TGG | - | chr4_1:82706167-82706186 | None:intergenic | 35.0% |
| TCATCAGTTAGCAATACCTT+AGG | + | chr4_1:82706322-82706341 | Msa0578180:intron | 35.0% | |
| !!! | TCCTTGTTTTTTCTCTTCCA+CGG | + | chr4_1:82706477-82706496 | Msa0578180:intron | 35.0% |
| AGGGAAAAATCTTGCTGAAT+TGG | + | chr4_1:82706547-82706566 | Msa0578180:intron | 35.0% | |
| AAGCAGATTATGGGATAAGT+GGG | - | chr4_1:82706585-82706604 | None:intergenic | 35.0% | |
| TAAGCAGATTATGGGATAAG+TGG | - | chr4_1:82706586-82706605 | None:intergenic | 35.0% | |
| GCTTTATGTAGAGAGAAAGT+AGG | - | chr4_1:82707126-82707145 | None:intergenic | 35.0% | |
| ! | TGATTTTTCTCACCTAGCAA+TGG | + | chr4_1:82706802-82706821 | Msa0578180:intron | 35.0% |
| GTAAGCGGAAGCAAAATAAA+AGG | - | chr4_1:82706843-82706862 | None:intergenic | 35.0% | |
| !!! | TTTATTTTGCTTCCGCTTAC+TGG | + | chr4_1:82706843-82706862 | Msa0578180:intron | 35.0% |
| ! | AGATTTTTCTCACCTAGCAA+TGG | - | chr4_1:82707028-82707047 | None:intergenic | 35.0% |
| GCTTTATGTAGAGAGAAAGT+AGG | + | chr4_1:82707126-82707145 | Msa0578180:intron | 35.0% | |
| !! | AGAACGTGTAACACTTTTTG+AGG | + | chr4_1:82707215-82707234 | Msa0578180:intron | 35.0% |
| !! | GAACGTGTAACACTTTTTGA+GGG | + | chr4_1:82707216-82707235 | Msa0578180:intron | 35.0% |
| AGGGAAAAATCTTGCTGAAT+TGG | - | chr4_1:82706547-82706566 | None:intergenic | 35.0% | |
| !! | TTGGCCTTGTTATAGCTATT+TGG | + | chr4_1:82707444-82707463 | Msa0578180:intron | 35.0% |
| ACGTCCAAATAGCTATAACA+AGG | - | chr4_1:82707451-82707470 | None:intergenic | 35.0% | |
| ATGTTTGCAGTTTCTTGATG+TGG | + | chr4_1:82707599-82707618 | Msa0578180:intron | 35.0% | |
| TGAACTCCTTATCACTTGTT+TGG | + | chr4_1:82707631-82707650 | Msa0578180:intron | 35.0% | |
| AATTCAGTTTGCAAGTCAAG+AGG | + | chr4_1:82707673-82707692 | Msa0578180:CDS | 35.0% | |
| ATGTGTCCCAAATAAACTTG+TGG | + | chr4_1:82707702-82707721 | Msa0578180:CDS | 35.0% | |
| GCGTGTCATGGATAATATAT+TGG | + | chr4_1:82707954-82707973 | Msa0578180:intron | 35.0% | |
| ACAAAAATACATGAGCTGCA+AGG | + | chr4_1:82708091-82708110 | Msa0578180:CDS | 35.0% | |
| CAAAAATACATGAGCTGCAA+GGG | + | chr4_1:82708092-82708111 | Msa0578180:CDS | 35.0% | |
| GAACAAGTGTTTATAAGTGG+GGG | - | chr4_1:82708405-82708424 | None:intergenic | 35.0% | |
| CCTGAACAAGTGTTTATAAG+TGG | - | chr4_1:82708408-82708427 | None:intergenic | 35.0% | |
| CCACTTATAAACACTTGTTC+AGG | + | chr4_1:82708405-82708424 | Msa0578180:intron | 35.0% | |
| GAACAAGTGTTTATAAGTGG+GGG | - | chr4_1:82708405-82708424 | None:intergenic | 35.0% | |
| CCAGAACAAGTGTTTATAAG+TGG | - | chr4_1:82708643-82708662 | None:intergenic | 35.0% | |
| CCACTTATAAACACTTGTTC+TGG | + | chr4_1:82708405-82708424 | Msa0578180:intron | 35.0% | |
| TGTGTTAAAGAGTCCAATGT+GGG | - | chr4_1:82708677-82708696 | None:intergenic | 35.0% | |
| !! | GGTAATTAAAGGCACCATAA+TGG | - | chr4_1:82708953-82708972 | None:intergenic | 35.0% |
| !! | CTACCAAGAAGCTTTAAGAT+TGG | + | chr4_1:82709011-82709030 | Msa0578180:intron | 35.0% |
| GATCCAATCTTAAAGCTTCT+TGG | - | chr4_1:82709017-82709036 | None:intergenic | 35.0% | |
| CATTGGAGGAGAAAATGAAA+AGG | - | chr4_1:82709053-82709072 | None:intergenic | 35.0% | |
| !!! | TGTCATGAAAGTGTTTTCCT+TGG | - | chr4_1:82709185-82709204 | None:intergenic | 35.0% |
| TCCGTGTATAAACATGATTC+TGG | - | chr4_1:82709244-82709263 | None:intergenic | 35.0% | |
| TTTGACTAACTTTCTTCAGG+TGG | + | chr4_1:82709497-82709516 | Msa0578180:intron | 35.0% | |
| !!! | AGTGGCAACTATTGTTTTGA+TGG | + | chr4_1:82709627-82709646 | Msa0578180:CDS | 35.0% |
| AGGCTGCATTTGGAAAATTT+AGG | + | chr4_1:82709776-82709795 | Msa0578180:three_prime_UTR | 35.0% | |
| GGCTGCATTTGGAAAATTTA+GGG | + | chr4_1:82709777-82709796 | Msa0578180:three_prime_UTR | 35.0% | |
| TGCATTTGGAAAATTTAGGG+AGG | + | chr4_1:82709780-82709799 | Msa0578180:three_prime_UTR | 35.0% | |
| ! | CTAGTTTGGTGAAGAATGAA+AGG | + | chr4_1:82709997-82710016 | Msa0578180:three_prime_UTR | 35.0% |
| GTGAAGAATGAAAGGTGAAA+GGG | + | chr4_1:82710005-82710024 | Msa0578180:three_prime_UTR | 35.0% | |
| GTGAAAGGGAGAATTATACT+TGG | + | chr4_1:82710019-82710038 | Msa0578180:three_prime_UTR | 35.0% | |
| GAAGATGAGTAATGTTACGG+TGG | - | chr4_1:82703121-82703140 | None:intergenic | 40.0% | |
| !! | TGAACGGTGTTATTGCAGAA+AGG | - | chr4_1:82703213-82703232 | None:intergenic | 40.0% |
| TTCTGCAATAACACCGTTCA+AGG | + | chr4_1:82703213-82703232 | Msa0578180:CDS | 40.0% | |
| TTCCTTCTTTCCGACAACAA+CGG | + | chr4_1:82703240-82703259 | Msa0578180:CDS | 40.0% | |
| !! | ATTTCCTGTGTCACTTTAGG+AGG | + | chr4_1:82703304-82703323 | Msa0578180:intron | 40.0% |
| TCGAATCACTTGCCTATGTT+TGG | + | chr4_1:82703688-82703707 | Msa0578180:intron | 40.0% | |
| CCAAGAATGGAACCAAACAT+AGG | - | chr4_1:82703703-82703722 | None:intergenic | 40.0% | |
| ! | CCTATGTTTGGTTCCATTCT+TGG | + | chr4_1:82703700-82703719 | Msa0578180:intron | 40.0% |
| AATTCTAGACGCTCCAAGAA+TGG | - | chr4_1:82703716-82703735 | None:intergenic | 40.0% | |
| !! | GGAGCGTCTAGAATTGATTT+TGG | + | chr4_1:82703721-82703740 | Msa0578180:intron | 40.0% |
| GAGAATTTCTTCCCAGTTTG+AGG | - | chr4_1:82704101-82704120 | None:intergenic | 40.0% | |
| GGTTAAGACATTACCATTGC+AGG | - | chr4_1:82704291-82704310 | None:intergenic | 40.0% | |
| GCGGAAGGTGAAAAATCAAA+AGG | - | chr4_1:82704316-82704335 | None:intergenic | 40.0% | |
| GTGAAAAATTCAGCCATTCG+CGG | - | chr4_1:82704335-82704354 | None:intergenic | 40.0% | |
| ! | CGAATGGCTGAATTTTTCAC+CGG | + | chr4_1:82704335-82704354 | Msa0578180:intron | 40.0% |
| ! | GAATGGCTGAATTTTTCACC+GGG | + | chr4_1:82704336-82704355 | Msa0578180:intron | 40.0% |
| TGCATGTAAACGTAAGGACT+TGG | + | chr4_1:82704517-82704536 | Msa0578180:intron | 40.0% | |
| GCATGTAAACGTAAGGACTT+GGG | + | chr4_1:82704518-82704537 | Msa0578180:intron | 40.0% | |
| CATGTAAACGTAAGGACTTG+GGG | + | chr4_1:82704519-82704538 | Msa0578180:intron | 40.0% | |
| CTGTATCTGGACATACCTAT+TGG | - | chr4_1:82704734-82704753 | None:intergenic | 40.0% | |
| TGAAAAGGAAAAAGGGGTAG+GGG | - | chr4_1:82704784-82704803 | None:intergenic | 40.0% | |
| GATGAAAAGGAAAAAGGGGT+AGG | - | chr4_1:82704786-82704805 | None:intergenic | 40.0% | |
| AGTGTATTTGACTACTGTGC+TGG | + | chr4_1:82704930-82704949 | Msa0578180:CDS | 40.0% | |
| AATCTAGACATTTGAAGGGG+AGG | + | chr4_1:82705170-82705189 | Msa0578180:intron | 40.0% | |
| ! | CACACATTTTCGCTGTATGA+AGG | + | chr4_1:82705407-82705426 | Msa0578180:intron | 40.0% |
| CTATGCAGTGCAACATGTAT+AGG | - | chr4_1:82705864-82705883 | None:intergenic | 40.0% | |
| CTATACATGTTGCACTGCAT+AGG | + | chr4_1:82705862-82705881 | Msa0578180:intron | 40.0% | |
| AGTGAGTCTGACATTAGACA+TGG | - | chr4_1:82705944-82705963 | None:intergenic | 40.0% | |
| !!! | GCTAGCTTTTAGACAATCCT+AGG | - | chr4_1:82706072-82706091 | None:intergenic | 40.0% |
| GACTTACCAGAAGAATTGGA+CGG | - | chr4_1:82706219-82706238 | None:intergenic | 40.0% | |
| TGCAGACTTACCAGAAGAAT+TGG | - | chr4_1:82706223-82706242 | None:intergenic | 40.0% | |
| !! | AACACAATTACAAGGCACTG+AGG | - | chr4_1:82706256-82706275 | None:intergenic | 40.0% |
| !!! | AATCCTGTTTTGACCTAGCA+AGG | + | chr4_1:82706283-82706302 | Msa0578180:intron | 40.0% |
| ! | TTTAGAATCGGTACCTTGCT+AGG | - | chr4_1:82706299-82706318 | None:intergenic | 40.0% |
| !!! | CCTTGTTTTTTCTCTTCCAC+GGG | + | chr4_1:82706478-82706497 | Msa0578180:intron | 40.0% |
| ! | CAGTCAAAGTTGAGTTGTTG+TGG | + | chr4_1:82706511-82706530 | Msa0578180:intron | 40.0% |
| ATAAAACCTTGCCCATCACA+AGG | - | chr4_1:82706643-82706662 | None:intergenic | 40.0% | |
| AGTTTGAGCAAGTGAAGGTT+TGG | + | chr4_1:82706734-82706753 | Msa0578180:intron | 40.0% | |
| GTTTAAACCAGACCAGTAAG+CGG | - | chr4_1:82706858-82706877 | None:intergenic | 40.0% | |
| !!! | TTTATTTTGCTTCCGCTTGC+TGG | - | chr4_1:82706987-82707006 | None:intergenic | 40.0% |
| GCAAGCGGAAGCAAAATAAA+AGG | + | chr4_1:82706987-82707006 | Msa0578180:intron | 40.0% | |
| !! | AGGGAGCGTTAAACAGATTA+TGG | + | chr4_1:82707235-82707254 | Msa0578180:intron | 40.0% |
| !! | GGGAGCGTTAAACAGATTAT+GGG | + | chr4_1:82707236-82707255 | Msa0578180:intron | 40.0% |
| !! | AAACTCAATATTGGCTCACG+TGG | + | chr4_1:82707323-82707342 | Msa0578180:intron | 40.0% |
| TCACGTGGAAGAGAAAAAAC+AGG | + | chr4_1:82707338-82707357 | Msa0578180:intron | 40.0% | |
| CACGTGGAAGAGAAAAAACA+GGG | + | chr4_1:82707339-82707358 | Msa0578180:intron | 40.0% | |
| ATTGCAGTCATGCTCTTGTT+AGG | + | chr4_1:82707378-82707397 | Msa0578180:intron | 40.0% | |
| TTGCAGTCATGCTCTTGTTA+GGG | + | chr4_1:82707379-82707398 | Msa0578180:intron | 40.0% | |
| ! | GGTTGTAGTTGTACGTCTTT+TGG | + | chr4_1:82707404-82707423 | Msa0578180:intron | 40.0% |
| ACTAGAAACAATACTGAGCG+AGG | + | chr4_1:82707978-82707997 | Msa0578180:intron | 40.0% | |
| TTATGACGCCCCAAAGTATA+TGG | + | chr4_1:82708160-82708179 | Msa0578180:CDS | 40.0% | |
| !! | GCTTGGTGTGTGGATATAAA+TGG | + | chr4_1:82708485-82708504 | Msa0578180:intron | 40.0% |
| TGGTGTGTGGATATAAATGG+TGG | + | chr4_1:82708488-82708507 | Msa0578180:intron | 40.0% | |
| GGTGTGTGGATATAAATGGT+GGG | + | chr4_1:82708489-82708508 | Msa0578180:intron | 40.0% | |
| TACTATCAGGTTTCCGCTAT+CGG | - | chr4_1:82708519-82708538 | None:intergenic | 40.0% | |
| !! | ACCTCACAAGTCGATTTTGT+GGG | - | chr4_1:82708609-82708628 | None:intergenic | 40.0% |
| GTGTGTTAAAGAGTCCAATG+TGG | - | chr4_1:82708678-82708697 | None:intergenic | 40.0% | |
| !! | GCTTGGTGCGTAGATATAAA+TGG | + | chr4_1:82708721-82708740 | Msa0578180:intron | 40.0% |
| TGGTGCGTAGATATAAATGG+TGG | + | chr4_1:82708724-82708743 | Msa0578180:intron | 40.0% | |
| GGTGCGTAGATATAAATGGT+GGG | + | chr4_1:82708725-82708744 | Msa0578180:intron | 40.0% | |
| ! | CAACCACGATTTCTAAGAAC+TGG | + | chr4_1:82708880-82708899 | Msa0578180:intron | 40.0% |
| ATGCCCTGACATAACCATTA+TGG | + | chr4_1:82708936-82708955 | Msa0578180:intron | 40.0% | |
| GCACCATAATGGTTATGTCA+GGG | - | chr4_1:82708942-82708961 | None:intergenic | 40.0% | |
| ATTACCAAACTCCATGTTGG+AGG | + | chr4_1:82708967-82708986 | Msa0578180:intron | 40.0% | |
| !! | CTTGGTAGTTGATAACCAAC+CGG | - | chr4_1:82708999-82709018 | None:intergenic | 40.0% |
| GGAGAAAATGAAAAGGCAAC+AGG | - | chr4_1:82709046-82709065 | None:intergenic | 40.0% | |
| TTTCTCCTCCAATGCTATTG+CGG | + | chr4_1:82709059-82709078 | Msa0578180:CDS | 40.0% | |
| !! | GCAAAAAAGCACTAAGCACA+GGG | - | chr4_1:82709322-82709341 | None:intergenic | 40.0% |
| ! | TGTGCTAGATTTTGTTGCAC+TGG | + | chr4_1:82709589-82709608 | Msa0578180:intron | 40.0% |
| ! | CTAGATTTTGTTGCACTGGA+CGG | + | chr4_1:82709593-82709612 | Msa0578180:intron | 40.0% |
| ! | TAGATTTTGTTGCACTGGAC+GGG | + | chr4_1:82709594-82709613 | Msa0578180:intron | 40.0% |
| !!! | TGTTTTGATGGTATGGAAGG+AGG | + | chr4_1:82709639-82709658 | Msa0578180:CDS | 40.0% |
| ! | TAGCTTTTCCTTTCACGAAC+TGG | + | chr4_1:82709738-82709757 | Msa0578180:three_prime_UTR | 40.0% |
| AGGATGAGATAGAGACACAA+GGG | + | chr4_1:82709800-82709819 | Msa0578180:three_prime_UTR | 40.0% | |
| AGACACAAGGGATAGAGAAT+AGG | + | chr4_1:82709812-82709831 | Msa0578180:three_prime_UTR | 40.0% | |
| GGGATAGAGAATAGGCTAAA+TGG | + | chr4_1:82709820-82709839 | Msa0578180:three_prime_UTR | 40.0% | |
| GGTGAAGAATGAAAGGTGAA+AGG | + | chr4_1:82710004-82710023 | Msa0578180:three_prime_UTR | 40.0% | |
| AAGAAGGAACCTGCCTTGAA+CGG | - | chr4_1:82703229-82703248 | None:intergenic | 45.0% | |
| TACCGTTGTTGTCGGAAAGA+AGG | - | chr4_1:82703245-82703264 | None:intergenic | 45.0% | |
| TCTTTCCGACAACAACGGTA+TGG | + | chr4_1:82703245-82703264 | Msa0578180:CDS | 45.0% | |
| GGATACCATACCGTTGTTGT+CGG | - | chr4_1:82703253-82703272 | None:intergenic | 45.0% | |
| GATACCTCCTAAAGTGACAC+AGG | - | chr4_1:82703311-82703330 | None:intergenic | 45.0% | |
| TATGTTACCGGTGTTCGTGT+CGG | - | chr4_1:82703349-82703368 | None:intergenic | 45.0% | |
| !! | TGTCAGGGTCTTGTTGATGT+CGG | + | chr4_1:82703387-82703406 | Msa0578180:intron | 45.0% |
| CGGTTCTATGGTGACACAAA+TGG | - | chr4_1:82704000-82704019 | None:intergenic | 45.0% | |
| TCTCGTTGTTGTCCTCAAAC+TGG | + | chr4_1:82704086-82704105 | Msa0578180:CDS | 45.0% | |
| CTCGTTGTTGTCCTCAAACT+GGG | + | chr4_1:82704087-82704106 | Msa0578180:CDS | 45.0% | |
| TTGCTGTCTCAATCCTGCAA+TGG | + | chr4_1:82704275-82704294 | Msa0578180:CDS | 45.0% | |
| ! | GATTTTTCACCTTCCGCGAA+TGG | + | chr4_1:82704319-82704338 | Msa0578180:intron | 45.0% |
| AAAATTCAGCCATTCGCGGA+AGG | - | chr4_1:82704331-82704350 | None:intergenic | 45.0% | |
| TGTCAAGCGTTAACGCCAAT+AGG | + | chr4_1:82704716-82704735 | Msa0578180:intron | 45.0% | |
| GAAAAGGAAAAAGGGGTAGG+GGG | - | chr4_1:82704783-82704802 | None:intergenic | 45.0% | |
| ACTACTGTGCTGGAAGATGT+CGG | + | chr4_1:82704940-82704959 | Msa0578180:CDS | 45.0% | |
| TTAGCGTGTCTTGAATGCGT+AGG | - | chr4_1:82705286-82705305 | None:intergenic | 45.0% | |
| TTAGCGTGTCTTGAATGCGT+AGG | - | chr4_1:82705286-82705305 | None:intergenic | 45.0% | |
| CTGAGAATTTAGGCGACACA+TGG | + | chr4_1:82705563-82705582 | Msa0578180:intron | 45.0% | |
| ACGGTAGAGAAAAGCAATGG+TGG | - | chr4_1:82706200-82706219 | None:intergenic | 45.0% | |
| TGGACGGTAGAGAAAAGCAA+TGG | - | chr4_1:82706203-82706222 | None:intergenic | 45.0% | |
| TCTCTACCGTCCAATTCTTC+TGG | + | chr4_1:82706210-82706229 | Msa0578180:CDS | 45.0% | |
| GTACCTTGCTAGGTCAAAAC+AGG | - | chr4_1:82706289-82706308 | None:intergenic | 45.0% | |
| !!! | ACTGTTTTTGCCCAGACTGA+AGG | + | chr4_1:82706356-82706375 | Msa0578180:intron | 45.0% |
| TTACCACTCTCCTTCAGTCT+GGG | - | chr4_1:82706369-82706388 | None:intergenic | 45.0% | |
| ATTACCACTCTCCTTCAGTC+TGG | - | chr4_1:82706370-82706389 | None:intergenic | 45.0% | |
| CCCGTGGAAGAGAAAAAACA+AGG | - | chr4_1:82706481-82706500 | None:intergenic | 45.0% | |
| !! | GGGAGCGTTAAGCAGATTAT+GGG | - | chr4_1:82706594-82706613 | None:intergenic | 45.0% |
| !! | AGGGAGCGTTAAGCAGATTA+TGG | - | chr4_1:82706595-82706614 | None:intergenic | 45.0% |
| ACATTCTCCAGACCTTGTGA+TGG | + | chr4_1:82706628-82706647 | Msa0578180:intron | 45.0% | |
| CATTCTCCAGACCTTGTGAT+GGG | + | chr4_1:82706629-82706648 | Msa0578180:intron | 45.0% | |
| CTTCACTTGCTCAAACTCGA+TGG | - | chr4_1:82707099-82707118 | None:intergenic | 45.0% | |
| CATCGAGTTTGAGCAAGTGA+AGG | + | chr4_1:82706729-82706748 | Msa0578180:intron | 45.0% | |
| ! | TTTGGAACAGCGAAACAGTC+CGG | + | chr4_1:82706752-82706771 | Msa0578180:intron | 45.0% |
| ! | TTTTCTCACCTAGCAATGGC+TGG | + | chr4_1:82706806-82706825 | Msa0578180:intron | 45.0% |
| GTTTAAACCAGACCAGCAAG+CGG | + | chr4_1:82706972-82706991 | Msa0578180:intron | 45.0% | |
| ACTAACATCCAGCCATTGCT+AGG | + | chr4_1:82707013-82707032 | Msa0578180:intron | 45.0% | |
| ! | TTTTCTCACCTAGCAATGGC+TGG | - | chr4_1:82706806-82706825 | None:intergenic | 45.0% |
| CATCGAGTTTGAGCAAGTGA+AGG | - | chr4_1:82706729-82706748 | None:intergenic | 45.0% | |
| CTTCACTTGCTCAAACTCGA+TGG | + | chr4_1:82707099-82707118 | Msa0578180:intron | 45.0% | |
| ! | ATAGAGCCTTGTCCATCACA+AGG | + | chr4_1:82707187-82707206 | Msa0578180:intron | 45.0% |
| !! | TTCAGACCTTGTGATGGACA+AGG | - | chr4_1:82707196-82707215 | None:intergenic | 45.0% |
| ACGTTCTTCAGACCTTGTGA+TGG | - | chr4_1:82707202-82707221 | None:intergenic | 45.0% | |
| GGGATAAGTGGGAAAAGAAG+TGG | + | chr4_1:82707256-82707275 | Msa0578180:intron | 45.0% | |
| TGCAGTCATGCTCTTGTTAG+GGG | + | chr4_1:82707380-82707399 | Msa0578180:intron | 45.0% | |
| ATAGCACTCTCACAGAAGCA+AGG | + | chr4_1:82707507-82707526 | Msa0578180:CDS | 45.0% | |
| TTTACCTCCCAGCAACAACA+TGG | - | chr4_1:82707544-82707563 | None:intergenic | 45.0% | |
| CTCCTTATCACTTGTTTGGC+AGG | + | chr4_1:82707635-82707654 | Msa0578180:intron | 45.0% | |
| TGCCTGCCAAACAAGTGATA+AGG | - | chr4_1:82707640-82707659 | None:intergenic | 45.0% | |
| TATCACTTGTTTGGCAGGCA+AGG | + | chr4_1:82707640-82707659 | Msa0578180:intron | 45.0% | |
| TATACGTCTAATGCACAGCG+CGG | - | chr4_1:82707825-82707844 | None:intergenic | 45.0% | |
| AAATACATGAGCTGCAAGGG+AGG | + | chr4_1:82708095-82708114 | Msa0578180:CDS | 45.0% | |
| GCGTCATAAACAACTTCAGC+AGG | - | chr4_1:82708149-82708168 | None:intergenic | 45.0% | |
| CTAACACAACCCCACAAAAC+CGG | + | chr4_1:82708361-82708380 | Msa0578180:intron | 45.0% | |
| ACACCAAGCCCAATAGTGTT+GGG | - | chr4_1:82708474-82708493 | None:intergenic | 45.0% | |
| !! | GATAGCGGAAACCTGATAGT+AGG | + | chr4_1:82708518-82708537 | Msa0578180:intron | 45.0% |
| ! | CGATTTTGTGGGGTTGTGTA+GGG | - | chr4_1:82708598-82708617 | None:intergenic | 45.0% |
| ! | TCGATTTTGTGGGGTTGTGT+AGG | - | chr4_1:82708599-82708618 | None:intergenic | 45.0% |
| !! | CCTCACAAGTCGATTTTGTG+GGG | - | chr4_1:82708608-82708627 | None:intergenic | 45.0% |
| !! | CACCTCACAAGTCGATTTTG+TGG | - | chr4_1:82708610-82708629 | None:intergenic | 45.0% |
| GTCCAATGTGGGATAAGAGA+TGG | - | chr4_1:82708666-82708685 | None:intergenic | 45.0% | |
| GCACCAAGCCCAATAGTATT+GGG | - | chr4_1:82708710-82708729 | None:intergenic | 45.0% | |
| ! | GCGTAGATATAAATGGTGGG+TGG | + | chr4_1:82708728-82708747 | Msa0578180:intron | 45.0% |
| CTAACACAGCCTCACAAAAC+CGG | - | chr4_1:82708857-82708876 | None:intergenic | 45.0% | |
| GGCACCATAATGGTTATGTC+AGG | - | chr4_1:82708943-82708962 | None:intergenic | 45.0% | |
| !! | GGCAAAAAAGCACTAAGCAC+AGG | - | chr4_1:82709323-82709342 | None:intergenic | 45.0% |
| !!! | GTGCTTAGTGCTTTTTTGCC+TGG | + | chr4_1:82709323-82709342 | Msa0578180:CDS | 45.0% |
| AAAAGGGAACACAGCTTACC+AGG | - | chr4_1:82709344-82709363 | None:intergenic | 45.0% | |
| CGTTCTTTCCAGTTCGTGAA+AGG | - | chr4_1:82709749-82709768 | None:intergenic | 45.0% | |
| ACTGGAAAGAACGCTACTTC+AGG | + | chr4_1:82709756-82709775 | Msa0578180:three_prime_UTR | 45.0% | |
| GAGGATGAGATAGAGACACA+AGG | + | chr4_1:82709799-82709818 | Msa0578180:three_prime_UTR | 45.0% | |
| !!! | TTTGTTTTAAAAAAAAAAAA+TGG | - | chr4_1:82704878-82704897 | None:intergenic | 5.0% |
| GCAATAACACCGTTCAAGGC+AGG | + | chr4_1:82703217-82703236 | Msa0578180:CDS | 50.0% | |
| !! | TCGGCATAGTTCTGAGAGTG+TGG | + | chr4_1:82704959-82704978 | Msa0578180:CDS | 50.0% |
| !! | TGACTGAATATTGGCTCCCG+TGG | - | chr4_1:82706497-82706516 | None:intergenic | 50.0% |
| ACTAACCTCCAGCCATTGCT+AGG | - | chr4_1:82706817-82706836 | None:intergenic | 50.0% | |
| TTTGCTTCCGCTTACTGGTC+TGG | + | chr4_1:82706848-82706867 | Msa0578180:intron | 50.0% | |
| ! | CTGCTTGCTGCTGCTATAAC+CGG | + | chr4_1:82707056-82707075 | Msa0578180:intron | 50.0% |
| AGTCATGCTCTTGTTAGGGG+TGG | + | chr4_1:82707383-82707402 | Msa0578180:intron | 50.0% | |
| !! | GTGAGAGTGCTATTTGCCAC+TGG | - | chr4_1:82707500-82707519 | None:intergenic | 50.0% |
| CTCACAGAAGCAAGGCTGAA+CGG | + | chr4_1:82707515-82707534 | Msa0578180:CDS | 50.0% | |
| AACGGCATCCATGTTGTTGC+TGG | + | chr4_1:82707533-82707552 | Msa0578180:CDS | 50.0% | |
| ACGGCATCCATGTTGTTGCT+GGG | + | chr4_1:82707534-82707553 | Msa0578180:CDS | 50.0% | |
| TAGTGCTTGGTTGCGTGTCA+TGG | + | chr4_1:82707942-82707961 | Msa0578180:intron | 50.0% | |
| AGGTCATCTCTCAACCGATG+TGG | + | chr4_1:82708425-82708444 | Msa0578180:intron | 50.0% | |
| GGTCATCTCTCAACCGATGT+GGG | + | chr4_1:82708426-82708445 | Msa0578180:intron | 50.0% | |
| GTCATCTCTCAACCGATGTG+GGG | + | chr4_1:82708427-82708446 | Msa0578180:intron | 50.0% | |
| GGTGTTAAAGAGCCCCACAT+CGG | - | chr4_1:82708442-82708461 | None:intergenic | 50.0% | |
| ! | AATAGTGTTGGGCATGAGGG+GGG | - | chr4_1:82708463-82708482 | None:intergenic | 50.0% |
| ! | CAATAGTGTTGGGCATGAGG+GGG | - | chr4_1:82708464-82708483 | None:intergenic | 50.0% |
| ! | CCAATAGTGTTGGGCATGAG+GGG | - | chr4_1:82708465-82708484 | None:intergenic | 50.0% |
| ! | CCCAATAGTGTTGGGCATGA+GGG | - | chr4_1:82708466-82708485 | None:intergenic | 50.0% |
| CCCTCATGCCCAACACTATT+GGG | + | chr4_1:82708463-82708482 | Msa0578180:intron | 50.0% | |
| ATGCCCAACACTATTGGGCT+TGG | + | chr4_1:82708468-82708487 | Msa0578180:intron | 50.0% | |
| CACACCAAGCCCAATAGTGT+TGG | - | chr4_1:82708475-82708494 | None:intergenic | 50.0% | |
| !! | ACACTATTGGGCTTGGTGTG+TGG | + | chr4_1:82708475-82708494 | Msa0578180:intron | 50.0% |
| !! | AATGGTGGGTGATCCGATAG+CGG | + | chr4_1:82708503-82708522 | Msa0578180:intron | 50.0% |
| AGCCTCTCCAAGATCTGTTG+GGG | - | chr4_1:82708546-82708565 | None:intergenic | 50.0% | |
| GAGCCTCTCCAAGATCTGTT+GGG | - | chr4_1:82708547-82708566 | None:intergenic | 50.0% | |
| AGAGCCTCTCCAAGATCTGT+TGG | - | chr4_1:82708548-82708567 | None:intergenic | 50.0% | |
| !! | CCCCACAAAATCGACTTGTG+AGG | + | chr4_1:82708605-82708624 | Msa0578180:intron | 50.0% |
| GGCCATCTCTTATCCCACAT+TGG | + | chr4_1:82708661-82708680 | Msa0578180:intron | 50.0% | |
| ! | CAATAGTATTGGGCGTGAGG+GGG | - | chr4_1:82708700-82708719 | None:intergenic | 50.0% |
| ! | CCAATAGTATTGGGCGTGAG+GGG | - | chr4_1:82708701-82708720 | None:intergenic | 50.0% |
| ! | CCCAATAGTATTGGGCGTGA+GGG | - | chr4_1:82708702-82708721 | None:intergenic | 50.0% |
| CCCTCACGCCCAATACTATT+GGG | + | chr4_1:82708699-82708718 | Msa0578180:intron | 50.0% | |
| ACGCCCAATACTATTGGGCT+TGG | + | chr4_1:82708704-82708723 | Msa0578180:intron | 50.0% | |
| CGCACCAAGCCCAATAGTAT+TGG | - | chr4_1:82708711-82708730 | None:intergenic | 50.0% | |
| !! | GATAGCGGAAACCTGATAGC+AGG | + | chr4_1:82708754-82708773 | Msa0578180:intron | 50.0% |
| TGAACGCAACCCCACAAAAC+CGG | + | chr4_1:82708804-82708823 | Msa0578180:intron | 50.0% | |
| !! | CATCGCAAACCGGTTTTGTG+AGG | + | chr4_1:82708845-82708864 | Msa0578180:intron | 50.0% |
| !! | CGGTTTTGTGAGGCTGTGTT+AGG | + | chr4_1:82708855-82708874 | Msa0578180:intron | 50.0% |
| GCGCCAGTTCTTAGAAATCG+TGG | - | chr4_1:82708886-82708905 | None:intergenic | 50.0% | |
| ACCAAACTCCATGTTGGAGG+TGG | + | chr4_1:82708970-82708989 | Msa0578180:intron | 50.0% | |
| ACCACCTCCAACATGGAGTT+TGG | - | chr4_1:82708974-82708993 | None:intergenic | 50.0% | |
| TAGCGCTACCGCAATAGCAT+TGG | - | chr4_1:82709070-82709089 | None:intergenic | 50.0% | |
| AATGCTATTGCGGTAGCGCT+AGG | + | chr4_1:82709069-82709088 | Msa0578180:intron | 50.0% | |
| ATGGTTCGCATCAGCACACA+AGG | + | chr4_1:82709287-82709306 | Msa0578180:CDS | 50.0% | |
| ACGCTACTTCAGGCTGCATT+TGG | + | chr4_1:82709766-82709785 | Msa0578180:three_prime_UTR | 50.0% | |
| !! | TGAAGCACCGACACGAACAC+CGG | + | chr4_1:82703339-82703358 | Msa0578180:intron | 55.0% |
| TTGCCCAGACTGAAGGAGAG+TGG | + | chr4_1:82706363-82706382 | Msa0578180:intron | 55.0% | |
| !! | TCCAGACCTTGTGATGGGCA+AGG | + | chr4_1:82706634-82706653 | Msa0578180:intron | 55.0% |
| ACCTTGCCCATCACAAGGTC+TGG | - | chr4_1:82706638-82706657 | None:intergenic | 55.0% | |
| ! | CTGCTTGCTGCTGCTCTAAC+CGG | - | chr4_1:82706774-82706793 | None:intergenic | 55.0% |
| TCTCACCTAGCAATGGCTGG+AGG | + | chr4_1:82706809-82706828 | Msa0578180:intron | 55.0% | |
| ! | TTTGCTTCCGCTTGCTGGTC+TGG | - | chr4_1:82706982-82707001 | None:intergenic | 55.0% |
| GCATCCATGTTGTTGCTGGG+AGG | + | chr4_1:82707537-82707556 | Msa0578180:CDS | 55.0% | |
| GGAGGTTGCTTGGCAAGTGT+TGG | + | chr4_1:82708113-82708132 | Msa0578180:CDS | 55.0% | |
| CCCCTCATGCCCAACACTAT+TGG | + | chr4_1:82708462-82708481 | Msa0578180:intron | 55.0% | |
| ! | GCCCAATAGTGTTGGGCATG+AGG | - | chr4_1:82708467-82708486 | None:intergenic | 55.0% |
| ! | CTGTTGGGGCACCTACTATC+AGG | - | chr4_1:82708532-82708551 | None:intergenic | 55.0% |
| GTAGGTGCCCCAACAGATCT+TGG | + | chr4_1:82708536-82708555 | Msa0578180:intron | 55.0% | |
| TGCCCCAACAGATCTTGGAG+AGG | + | chr4_1:82708541-82708560 | Msa0578180:intron | 55.0% | |
| CCCCTCACGCCCAATACTAT+TGG | + | chr4_1:82708698-82708717 | Msa0578180:intron | 55.0% | |
| ! | GCCCAATAGTATTGGGCGTG+AGG | - | chr4_1:82708703-82708722 | None:intergenic | 55.0% |
| !! | AATGGTGGGTGGCTCGATAG+CGG | + | chr4_1:82708739-82708758 | Msa0578180:intron | 55.0% |
| AGCGGAAACCTGATAGCAGG+TGG | + | chr4_1:82708757-82708776 | Msa0578180:intron | 55.0% | |
| AGCCTCCTCCAAGATCCGTT+GGG | - | chr4_1:82708783-82708802 | None:intergenic | 55.0% | |
| !! | CCTCACAAGCCGGTTTTGTG+GGG | - | chr4_1:82708816-82708835 | None:intergenic | 55.0% |
| !! | GCCTCACAAGCCGGTTTTGT+GGG | - | chr4_1:82708817-82708836 | None:intergenic | 55.0% |
| GCGAGGATTGCATCGCAAAC+CGG | + | chr4_1:82708835-82708854 | Msa0578180:intron | 55.0% | |
| TCCATGTTGGAGGTGGTGTC+CGG | + | chr4_1:82708977-82708996 | Msa0578180:intron | 55.0% | |
| ! | CGCTACCGCAATAGCATTGG+AGG | - | chr4_1:82709067-82709086 | None:intergenic | 55.0% |
| ! | TTTTGTTGCACTGGACGGGC+TGG | + | chr4_1:82709598-82709617 | Msa0578180:CDS | 55.0% |
| GAGCTGCAAGGGAGGTTGCT+TGG | + | chr4_1:82708103-82708122 | Msa0578180:CDS | 60.0% | |
| !! | ACCTCGCAGGCCGGTTTTGT+GGG | - | chr4_1:82708374-82708393 | None:intergenic | 60.0% |
| CCTGATAGCAGGTGGCCCAA+CGG | + | chr4_1:82708765-82708784 | Msa0578180:intron | 60.0% | |
| GAGCCTCCTCCAAGATCCGT+TGG | - | chr4_1:82708784-82708803 | None:intergenic | 60.0% | |
| !! | CCCCACAAAACCGGCTTGTG+AGG | + | chr4_1:82708813-82708832 | Msa0578180:intron | 60.0% |
| !! | CGCCTCACAAGCCGGTTTTG+TGG | - | chr4_1:82708818-82708837 | None:intergenic | 60.0% |
| !! | CAAAACCGGCTTGTGAGGCG+AGG | + | chr4_1:82708818-82708837 | Msa0578180:intron | 60.0% |
| GCAATCCTCGCCTCACAAGC+CGG | - | chr4_1:82708826-82708845 | None:intergenic | 60.0% | |
| ACCGGACACCACCTCCAACA+TGG | - | chr4_1:82708981-82709000 | None:intergenic | 60.0% | |
| TGTTGGAGGTGGTGTCCGGT+TGG | + | chr4_1:82708981-82709000 | Msa0578180:intron | 60.0% | |
| GCTATTGCGGTAGCGCTAGG+CGG | + | chr4_1:82709072-82709091 | Msa0578180:intron | 60.0% | |
| CTATTGCGGTAGCGCTAGGC+GGG | + | chr4_1:82709073-82709092 | Msa0578180:intron | 60.0% | |
| !! | TGGACGGGCTGGTATCGAAG+TGG | + | chr4_1:82709609-82709628 | Msa0578180:CDS | 60.0% |
| !! | CCTCGCAGGCCGGTTTTGTG+GGG | - | chr4_1:82708373-82708392 | None:intergenic | 65.0% |
| !! | CACCTCGCAGGCCGGTTTTG+TGG | - | chr4_1:82708375-82708394 | None:intergenic | 65.0% |
| CAAAACCGGCCTGCGAGGTG+AGG | + | chr4_1:82708375-82708394 | Msa0578180:intron | 65.0% | |
| GCAATCCTCACCTCGCAGGC+CGG | - | chr4_1:82708383-82708402 | None:intergenic | 65.0% | |
| CCGTTGGGCCACCTGCTATC+AGG | - | chr4_1:82708768-82708787 | None:intergenic | 65.0% | |
| GCAGGTGGCCCAACGGATCT+TGG | + | chr4_1:82708772-82708791 | Msa0578180:intron | 65.0% | |
| GGTGGCCCAACGGATCTTGG+AGG | + | chr4_1:82708775-82708794 | Msa0578180:intron | 65.0% | |
| GGCCCAACGGATCTTGGAGG+AGG | + | chr4_1:82708778-82708797 | Msa0578180:intron | 65.0% | |
| CCCCACAAAACCGGCCTGCG+AGG | + | chr4_1:82708370-82708389 | Msa0578180:intron | 70.0% | |
| GGGGGCAATCCTCACCTCGC+AGG | - | chr4_1:82708387-82708406 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 82703096 | 82710089 | 82703096 | ID=Msa0578180;Name=Msa0578180 |
| chr4_1 | mRNA | 82703096 | 82710089 | 82703096 | ID=Msa0578180-mRNA-1;Parent=Msa0578180;Name=Msa0578180-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0.5|0.61|0.84|0.66|0.69|13|402|326 |
| chr4_1 | exon | 82703096 | 82703266 | 82703096 | ID=Msa0578180-mRNA-1:exon:30008;Parent=Msa0578180-mRNA-1 |
| chr4_1 | exon | 82704086 | 82704126 | 82704086 | ID=Msa0578180-mRNA-1:exon:30009;Parent=Msa0578180-mRNA-1 |
| chr4_1 | exon | 82704224 | 82704296 | 82704224 | ID=Msa0578180-mRNA-1:exon:30010;Parent=Msa0578180-mRNA-1 |
| chr4_1 | exon | 82704372 | 82704423 | 82704372 | ID=Msa0578180-mRNA-1:exon:30011;Parent=Msa0578180-mRNA-1 |
| chr4_1 | exon | 82704919 | 82704980 | 82704919 | ID=Msa0578180-mRNA-1:exon:30012;Parent=Msa0578180-mRNA-1 |
| chr4_1 | exon | 82706168 | 82706264 | 82706168 | ID=Msa0578180-mRNA-1:exon:30013;Parent=Msa0578180-mRNA-1 |
| chr4_1 | exon | 82707501 | 82707558 | 82707501 | ID=Msa0578180-mRNA-1:exon:30014;Parent=Msa0578180-mRNA-1 |
| chr4_1 | exon | 82707657 | 82707743 | 82707657 | ID=Msa0578180-mRNA-1:exon:30015;Parent=Msa0578180-mRNA-1 |
| chr4_1 | exon | 82708088 | 82708181 | 82708088 | ID=Msa0578180-mRNA-1:exon:30016;Parent=Msa0578180-mRNA-1 |
| chr4_1 | exon | 82709040 | 82709080 | 82709040 | ID=Msa0578180-mRNA-1:exon:30017;Parent=Msa0578180-mRNA-1 |
| chr4_1 | exon | 82709238 | 82709344 | 82709238 | ID=Msa0578180-mRNA-1:exon:30018;Parent=Msa0578180-mRNA-1 |
| chr4_1 | exon | 82709516 | 82709522 | 82709516 | ID=Msa0578180-mRNA-1:exon:30019;Parent=Msa0578180-mRNA-1 |
| chr4_1 | exon | 82709597 | 82710089 | 82709597 | ID=Msa0578180-mRNA-1:exon:30020;Parent=Msa0578180-mRNA-1 |
| chr4_1 | CDS | 82703096 | 82703266 | 82703096 | ID=Msa0578180-mRNA-1:cds;Parent=Msa0578180-mRNA-1 |
| chr4_1 | CDS | 82704086 | 82704126 | 82704086 | ID=Msa0578180-mRNA-1:cds;Parent=Msa0578180-mRNA-1 |
| chr4_1 | CDS | 82704224 | 82704296 | 82704224 | ID=Msa0578180-mRNA-1:cds;Parent=Msa0578180-mRNA-1 |
| chr4_1 | CDS | 82704372 | 82704423 | 82704372 | ID=Msa0578180-mRNA-1:cds;Parent=Msa0578180-mRNA-1 |
| chr4_1 | CDS | 82704919 | 82704980 | 82704919 | ID=Msa0578180-mRNA-1:cds;Parent=Msa0578180-mRNA-1 |
| chr4_1 | CDS | 82706168 | 82706264 | 82706168 | ID=Msa0578180-mRNA-1:cds;Parent=Msa0578180-mRNA-1 |
| chr4_1 | CDS | 82707501 | 82707558 | 82707501 | ID=Msa0578180-mRNA-1:cds;Parent=Msa0578180-mRNA-1 |
| chr4_1 | CDS | 82707657 | 82707743 | 82707657 | ID=Msa0578180-mRNA-1:cds;Parent=Msa0578180-mRNA-1 |
| chr4_1 | CDS | 82708088 | 82708181 | 82708088 | ID=Msa0578180-mRNA-1:cds;Parent=Msa0578180-mRNA-1 |
| chr4_1 | CDS | 82709040 | 82709080 | 82709040 | ID=Msa0578180-mRNA-1:cds;Parent=Msa0578180-mRNA-1 |
| chr4_1 | CDS | 82709238 | 82709344 | 82709238 | ID=Msa0578180-mRNA-1:cds;Parent=Msa0578180-mRNA-1 |
| chr4_1 | CDS | 82709516 | 82709522 | 82709516 | ID=Msa0578180-mRNA-1:cds;Parent=Msa0578180-mRNA-1 |
| chr4_1 | CDS | 82709597 | 82709687 | 82709597 | ID=Msa0578180-mRNA-1:cds;Parent=Msa0578180-mRNA-1 |
| chr4_1 | three_prime_UTR | 82709688 | 82710089 | 82709688 | ID=Msa0578180-mRNA-1:three_prime_utr;Parent=Msa0578180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
